Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:57:43 (3534636): wrapper (7.7.26015): starting
05:57:43 (3534636): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 05:57:43] Arguments: --nthreads 8
[2025-06-05 05:57:43] Threads: 8
[2025-06-05 05:57:43] Checking for CVMFS
[2025-06-05 05:57:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:57:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:57:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:57:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:57:44] 2.12.6.0 8521 38598 539500 146814 3 851 29619917 40960001 25349 16776704 1 359761875 99.742 239612702 19165 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 05:57:44] CVMFS is ok
[2025-06-05 05:57:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:57:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:57:44] Further information can be found at the LHC@home message board.
[2025-06-05 05:57:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:57:44] Checking for apptainer binary...
[2025-06-05 05:57:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:57:44] Running /usr/bin/apptainer --version
[2025-06-05 05:57:44] apptainer version 1.4.1-1.el9
[2025-06-05 05:57:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:57:44] c7-4-30.aglt2.org
[2025-06-05 05:57:44] apptainer works
[2025-06-05 05:57:44] Set ATHENA_PROC_NUMBER=8
[2025-06-05 05:57:44] Set ATHENA_CORE_NUMBER=8
[2025-06-05 05:57:44] Starting ATLAS job with PandaID=6667580819
[2025-06-05 05:57:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:05:00]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:05:00] 2025-06-05 12:04:34,827 | INFO     | .. there are 22 such processes running
[2025-06-05 08:05:00] 2025-06-05 12:04:37,085 | INFO     | monitor loop #526: job 0:6667580819 is in state 'finished'
[2025-06-05 08:05:00] 2025-06-05 12:04:37,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:05:00] 2025-06-05 12:04:39,590 | INFO     | monitor loop #527: job 0:6667580819 is in state 'finished'
[2025-06-05 08:05:00] 2025-06-05 12:04:39,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:05:00] 2025-06-05 12:04:42,096 | INFO     | monitor loop #528: job 0:6667580819 is in state 'finished'
[2025-06-05 08:05:00] 2025-06-05 12:04:42,097 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:05:00] 2025-06-05 12:04:44,166 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:05:00] 2025-06-05 12:04:44,167 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667580819/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:05:00] 2025-06-05 12:04:44,167 | INFO     | extracted standard info from prmon json
[2025-06-05 08:05:00] 2025-06-05 12:04:44,167 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:05:00] 2025-06-05 12:04:44,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:05:00] 2025-06-05 12:04:44,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:05:00] 2025-06-05 12:04:44,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:05:00] 2025-06-05 12:04:44,170 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:05:00] 2025-06-05 12:04:44,171 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 08:05:00] 2025-06-05 12:04:44,171 | INFO     | sum of deviations: 15148294730.5
[2025-06-05 08:05:00] 2025-06-05 12:04:44,171 | INFO     | mean x: 1749121271.5
[2025-06-05 08:05:00] 2025-06-05 12:04:44,171 | INFO     | mean y: 2247793.75
[2025-06-05 08:05:00] 2025-06-05 12:04:44,171 | INFO     | -- intersect: -44817399454.817795
[2025-06-05 08:05:00] 2025-06-05 12:04:44,171 | INFO     | intersect: -44817399454.817795
[2025-06-05 08:05:00] 2025-06-05 12:04:44,172 | INFO     | chi2: 1.5669395241016046
[2025-06-05 08:05:00] 2025-06-05 12:04:44,172 | INFO     | sum of square deviations: 522502820.0
[2025-06-05 08:05:00] 2025-06-05 12:04:44,172 | INFO     | sum of deviations: 14969494610.999996
[2025-06-05 08:05:00] 2025-06-05 12:04:44,172 | INFO     | mean x: 1749121119.0
[2025-06-05 08:05:00] 2025-06-05 12:04:44,172 | INFO     | mean y: 2247379.882352941
[2025-06-05 08:05:00] 2025-06-05 12:04:44,173 | INFO     | -- intersect: -50109365730.37183
[2025-06-05 08:05:00] 2025-06-05 12:04:44,173 | INFO     | intersect: -50109365730.37183
[2025-06-05 08:05:00] 2025-06-05 12:04:44,173 | INFO     | chi2: 1.5675093691557638
[2025-06-05 08:05:00] 2025-06-05 12:04:44,173 | INFO     | current chi2=1.5675093691557638 (change=-0.03636675477222722 %)
[2025-06-05 08:05:00] 2025-06-05 12:04:44,173 | INFO     | right removable region: 118
[2025-06-05 08:05:00] 2025-06-05 12:04:44,173 | INFO     | sum of square deviations: 522502820.0
[2025-06-05 08:05:00] 2025-06-05 12:04:44,173 | INFO     | sum of deviations: -2713517838.9999995
[2025-06-05 08:05:00] 2025-06-05 12:04:44,174 | INFO     | mean x: 1749121424.0
[2025-06-05 08:05:00] 2025-06-05 12:04:44,174 | INFO     | mean y: 2286776.067226891
[2025-06-05 08:05:00] 2025-06-05 12:04:44,174 | INFO     | -- intersect: 9086012269.837923
[2025-06-05 08:05:00] 2025-06-05 12:04:44,174 | INFO     | intersect: 9086012269.837923
[2025-06-05 08:05:00] 2025-06-05 12:04:44,174 | INFO     | chi2: 0.04943909843201279
[2025-06-05 08:05:00] 2025-06-05 12:04:44,174 | INFO     | current chi2=0.04943909843201279 (change=96.84486237844065 %)
[2025-06-05 08:05:00] 2025-06-05 12:04:44,174 | INFO     | sum of square deviations: 459366752.5
[2025-06-05 08:05:00] 2025-06-05 12:04:44,175 | INFO     | sum of deviations: -1455446153.0000002
[2025-06-05 08:05:00] 2025-06-05 12:04:44,175 | INFO     | mean x: 1749121576.5
[2025-06-05 08:05:00] 2025-06-05 12:04:44,175 | INFO     | mean y: 2283692.5263157897
[2025-06-05 08:05:00] 2025-06-05 12:04:44,175 | INFO     | -- intersect: 5544156838.093637
[2025-06-05 08:05:00] 2025-06-05 12:04:44,175 | INFO     | intersect: 5544156838.093637
[2025-06-05 08:05:00] 2025-06-05 12:04:44,175 | INFO     | chi2: 0.0441553990878966
[2025-06-05 08:05:00] 2025-06-05 12:04:44,175 | INFO     | current chi2=0.0441553990878966 (change=10.687289031741102 %)
[2025-06-05 08:05:00] 2025-06-05 12:04:44,175 | INFO     | left removable region: 20
[2025-06-05 08:05:00] 2025-06-05 12:04:44,175 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 08:05:00] 2025-06-05 12:04:44,176 | INFO     | sum of deviations: 593884471.0000001
[2025-06-05 08:05:00] 2025-06-05 12:04:44,176 | INFO     | mean x: 1749121698.5
[2025-06-05 08:05:00] 2025-06-05 12:04:44,176 | INFO     | mean y: 2280670.4693877553
[2025-06-05 08:05:00] 2025-06-05 12:04:44,176 | INFO     | -- intersect: -3557396131.0560193
[2025-06-05 08:05:00] 2025-06-05 12:04:44,176 | INFO     | intersect: -3557396131.0560193
[2025-06-05 08:05:00] 2025-06-05 12:04:44,176 | INFO     | chi2: 0.015607752142442737
[2025-06-05 08:05:00] 2025-06-05 12:04:44,176 | INFO     | -- intersect: -3557396131.0560193
[2025-06-05 08:05:00] 2025-06-05 12:04:44,176 | INFO     | current memory leak: 2.04 B/s (using 98 data points, chi2=0.02)
[2025-06-05 08:05:00] 2025-06-05 12:04:44,177 | INFO     | ..............................
[2025-06-05 08:05:00] 2025-06-05 12:04:44,177 | INFO     | . Timing measurements:
[2025-06-05 08:05:00] 2025-06-05 12:04:44,177 | INFO     | . get job = 0 s
[2025-06-05 08:05:00] 2025-06-05 12:04:44,177 | INFO     | . initial setup = 2 s
[2025-06-05 08:05:00] 2025-06-05 12:04:44,177 | INFO     | . payload setup = 11 s
[2025-06-05 08:05:00] 2025-06-05 12:04:44,177 | INFO     | . stage-in = 0 s
[2025-06-05 08:05:00] 2025-06-05 12:04:44,177 | INFO     | . payload execution = 7555 s
[2025-06-05 08:05:00] 2025-06-05 12:04:44,177 | INFO     | . stage-out = 0 s
[2025-06-05 08:05:00] 2025-06-05 12:04:44,177 | INFO     | . log creation = 0 s
[2025-06-05 08:05:00] 2025-06-05 12:04:44,177 | INFO     | ..............................
[2025-06-05 08:05:00] 2025-06-05 12:04:44,762 | INFO     | 
[2025-06-05 08:05:00] 2025-06-05 12:04:44,762 | INFO     | job summary report
[2025-06-05 08:05:00] 2025-06-05 12:04:44,762 | INFO     | --------------------------------------------------
[2025-06-05 08:05:00] 2025-06-05 12:04:44,762 | INFO     | PanDA job id: 6667580819
[2025-06-05 08:05:00] 2025-06-05 12:04:44,762 | INFO     | task id: 44871837
[2025-06-05 08:05:00] 2025-06-05 12:04:44,762 | INFO     | errors: (none)
[2025-06-05 08:05:00] 2025-06-05 12:04:44,762 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | pilot state: finished 
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | transexitcode: 0
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | exeerrorcode: 0
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | exeerrordiag: 
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | exitcode: 0
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | exitmsg: OK
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | cpuconsumptiontime: 38651 s
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | nevents: 400
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | neventsw: 0
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | pid: 3547872
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | pgrp: 3547872
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | corecount: 8
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | event service: False
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | sizes: {0: 2397170, 1: 2397369, 10: 2397575, 11: 2397603, 7571: 2425061, 7573: 2434186, 7583: 2434300}
[2025-06-05 08:05:00] 2025-06-05 12:04:44,763 | INFO     | --------------------------------------------------
[2025-06-05 08:05:00] 2025-06-05 12:04:44,764 | INFO     | 
[2025-06-05 08:05:00] 2025-06-05 12:04:44,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 08:05:00] 2025-06-05 12:04:44,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,792 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:05:00] 2025-06-05 12:04:44,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,793 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:05:00] 2025-06-05 12:04:44,793 | INFO     | job 6667580819 has completed (purged errors)
[2025-06-05 08:05:00] 2025-06-05 12:04:44,793 | INFO     | overall cleanup function is called
[2025-06-05 08:05:00] 2025-06-05 12:04:45,802 | INFO     | --- collectZombieJob: --- 10, [3547872]
[2025-06-05 08:05:00] 2025-06-05 12:04:45,802 | INFO     | zombie collector waiting for pid 3547872
[2025-06-05 08:05:00] 2025-06-05 12:04:45,802 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:05:00] 2025-06-05 12:04:45,802 | INFO     | collected zombie processes
[2025-06-05 08:05:00] 2025-06-05 12:04:45,802 | INFO     | will attempt to kill all subprocesses of pid=3547872
[2025-06-05 08:05:00] 2025-06-05 12:04:46,268 | INFO     | process IDs to be killed: [3547872] (in reverse order)
[2025-06-05 08:05:00] 2025-06-05 12:04:46,416 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:05:00] 2025-06-05 12:04:46,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:05:00] 2025-06-05 12:04:46,481 | INFO     | did not find any defunct processes belonging to 3547872
[2025-06-05 08:05:00] 2025-06-05 12:04:46,569 | INFO     | did not find any defunct processes belonging to 3547872
[2025-06-05 08:05:00] 2025-06-05 12:04:46,570 | INFO     | ready for new job
[2025-06-05 08:05:00] 2025-06-05 12:04:46,588 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:05:00] 2025-06-05 12:04:46,590 | INFO     | **************************************
[2025-06-05 08:05:00] 2025-06-05 12:04:46,591 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:05:00] 2025-06-05 12:04:46,591 | INFO     | **************************************
[2025-06-05 08:05:00] 2025-06-05 12:04:46,591 | INFO     | 
[2025-06-05 08:05:00] 2025-06-05 12:04:46,622 | INFO     | architecture information:
[2025-06-05 08:05:00] 2025-06-05 12:04:46,636 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:05:00] 2025-06-05 12:04:46,681 | INFO     | cat /etc/os-release:
[2025-06-05 08:05:00] NAME="CentOS Linux"
[2025-06-05 08:05:00] VERSION="7 (Core)"
[2025-06-05 08:05:00] ID="centos"
[2025-06-05 08:05:00] ID_LIKE="rhel fedora"
[2025-06-05 08:05:00] VERSION_ID="7"
[2025-06-05 08:05:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:05:00] ANSI_COLOR="0;31"
[2025-06-05 08:05:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:05:00] HOME_URL="https://www.centos.org/"
[2025-06-05 08:05:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:05:00] 
[2025-06-05 08:05:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:05:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:05:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:05:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:05:00] 
[2025-06-05 08:05:00] 2025-06-05 12:04:46,681 | INFO     | **************************************
[2025-06-05 08:05:00] 2025-06-05 12:04:47,185 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 08:05:00] 2025-06-05 12:04:47,268 | INFO     | sufficient remaining disk space (129211826176 B)
[2025-06-05 08:05:00] 2025-06-05 12:04:47,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:05:00] 2025-06-05 12:04:47,269 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:05:00] 2025-06-05 12:04:47,269 | INFO     | update_server=False
[2025-06-05 08:05:00] 2025-06-05 12:04:47,269 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:05:00] 2025-06-05 12:04:47,270 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:05:00] 2025-06-05 12:04:47,270 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:05:00] 2025-06-05 12:04:47,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:05:00] 2025-06-05 12:04:47,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:05:00] 2025-06-05 12:04:47,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:05:00] 2025-06-05 12:04:47,346 | INFO     | all payload control threads have been joined
[2025-06-05 08:05:00] 2025-06-05 12:04:47,863 | INFO     | all data control threads have been joined
[2025-06-05 08:05:00] 2025-06-05 12:04:47,909 | INFO     | all job control threads have been joined
[2025-06-05 08:05:00] 2025-06-05 12:04:48,113 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:05:00] 2025-06-05 12:04:48,113 | INFO     | aborting loop
[2025-06-05 08:05:00] 2025-06-05 12:04:48,279 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:48,351 | INFO     | [payload] control thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:48,682 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:48,741 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:48,869 | INFO     | [data] control thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:48,901 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:48,919 | INFO     | [job] control thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:49,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:49,119 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:49,254 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:49,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:05:00] 2025-06-05 12:04:49,294 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:49,307 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:49,344 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:49,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:05:00] 2025-06-05 12:04:49,607 | INFO     | [job] validate thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:50,286 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:53,426 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:05:00] 2025-06-05 12:04:54,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140661180602176)>', '<ExcThread(monitor, started 140660665456384)>']
[2025-06-05 08:05:00] 2025-06-05 12:04:55,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:05:00] 2025-06-05 12:04:55,318 | INFO     | [monitor] control thread has ended
[2025-06-05 08:05:00] 2025-06-05 12:04:59,698 | INFO     | all workflow threads have been joined
[2025-06-05 08:05:00] 2025-06-05 12:04:59,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:05:00] 2025-06-05 12:04:59,698 | INFO     | traces error code: 0
[2025-06-05 08:05:00] 2025-06-05 12:04:59,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:05:00] 2025-06-05 12:04:59,872 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:05:00] 2025-06-05 12:04:59,910 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:05:00] 2025-06-05 12:04:59,927 [wrapper] pilotpid: 3540086
[2025-06-05 08:05:00] 2025-06-05 12:04:59,930 [wrapper] Pilot exit status: 0
[2025-06-05 08:05:00] 2025-06-05 12:05:00,044 [wrapper] pandaids: 6667580819
[2025-06-05 08:05:00] 2025-06-05 12:05:00,159 [wrapper] cleanup supervisor_pilot  316161 3540087
[2025-06-05 08:05:00] 2025-06-05 12:05:00,161 [wrapper] Test setup, not cleaning
[2025-06-05 08:05:00] 2025-06-05 12:05:00,163 [wrapper] apfmon messages muted
[2025-06-05 08:05:00] 2025-06-05 12:05:00,165 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:05:00] 2025-06-05 12:05:00,172 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:05:00]  *** Error codes and diagnostics ***
[2025-06-05 08:05:00]     "exeErrorCode": 0,
[2025-06-05 08:05:00]     "exeErrorDiag": "",
[2025-06-05 08:05:00]     "pilotErrorCode": 0,
[2025-06-05 08:05:00]     "pilotErrorDiag": "",
[2025-06-05 08:05:00]  *** Listing of results directory ***
[2025-06-05 08:05:00] total 416076
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas    495897 May 27 16:43 pilot3.tar.gz
[2025-06-05 08:05:00] -rwx------. 1 boincer umatlas     37140 May 27 16:50 runpilot2-wrapper.sh
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas      5111 May 27 16:50 queuedata.json
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas       100 Jun  5 05:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:05:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 05:57 run_atlas
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas       105 Jun  5 05:57 job.xml
[2025-06-05 08:05:00] -rw-r--r--. 2 boincer umatlas 224154974 Jun  5 05:57 EVNT.44871834._002873.pool.root.1
[2025-06-05 08:05:00] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 05:57 shared
[2025-06-05 08:05:00] -rw-r--r--. 2 boincer umatlas    508874 Jun  5 05:57 input.tar.gz
[2025-06-05 08:05:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 05:57 start_atlas.sh
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas         0 Jun  5 05:57 boinc_lockfile
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 05:57 pandaJob.out
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas    983289 Jun  5 05:57 agis_schedconf.cvmfs.json
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas   1598969 Jun  5 05:58 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:05:00] drwx------. 4 boincer umatlas      4096 Jun  5 05:58 pilot3
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas      6935 Jun  5 08:02 init_data.xml
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas        95 Jun  5 08:04 pilot_heartbeat.json
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas 195979958 Jun  5 08:04 HITS.44871837._073259.pool.root.1
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas       529 Jun  5 08:04 boinc_task_state.xml
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas      1040 Jun  5 08:04 memory_monitor_summary.json
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas    344475 Jun  5 08:04 log.44871837._073259.job.log.tgz.1
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 08:04 boinc_mmap_file
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas        27 Jun  5 08:04 wrapper_checkpoint.txt
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas      7692 Jun  5 08:04 heartbeat.json
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas      4477 Jun  5 08:04 pilotlog.txt
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas    702876 Jun  5 08:05 log.44871837._073259.job.log.1
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas       357 Jun  5 08:05 output.list
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas       620 Jun  5 08:05 runtime_log
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas   1064960 Jun  5 08:05 result.tar.gz
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas       654 Jun  5 08:05 tuBLDmqQGe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQOSKDmlOX1Hn.diag
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 08:05 runtime_log.err
[2025-06-05 08:05:00] -rw-r--r--. 1 boincer umatlas     21076 Jun  5 08:05 stderr.txt
[2025-06-05 08:05:00] HITS file was successfully produced:
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas 195979958 Jun  5 08:04 shared/HITS.pool.root.1
[2025-06-05 08:05:00]  *** Contents of shared directory: ***
[2025-06-05 08:05:00] total 411856
[2025-06-05 08:05:00] -rw-r--r--. 2 boincer umatlas 224154974 Jun  5 05:57 ATLAS.root_0
[2025-06-05 08:05:00] -rw-r--r--. 2 boincer umatlas    508874 Jun  5 05:57 input.tar.gz
[2025-06-05 08:05:00] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 05:57 start_atlas.sh
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas 195979958 Jun  5 08:04 HITS.pool.root.1
[2025-06-05 08:05:00] -rw-------. 1 boincer umatlas   1064960 Jun  5 08:05 result.tar.gz
08:05:21 (3534636): run_atlas exited; CPU time 38905.756213
08:05:21 (3534636): called boinc_finish(0)

</stderr_txt>
]]>

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