Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:56:11 (991193): wrapper (7.7.26015): starting
05:56:11 (991193): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 05:56:11] Arguments: --nthreads 8
[2025-06-05 05:56:11] Threads: 8
[2025-06-05 05:56:11] Checking for CVMFS
[2025-06-05 05:56:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:56:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:56:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:56:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:56:12] 2.12.6.0 9081 32788 575680 146814 1 361 22906684 32935936 25222 16776704 0 186318127 99.660 161133635 25968 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 05:56:12] CVMFS is ok
[2025-06-05 05:56:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:56:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:56:12] Further information can be found at the LHC@home message board.
[2025-06-05 05:56:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:56:12] Checking for apptainer binary...
[2025-06-05 05:56:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:56:12] Running /usr/bin/apptainer --version
[2025-06-05 05:56:12] apptainer version 1.4.1-1.el9
[2025-06-05 05:56:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:56:12] c6-12-29-3.aglt2.org
[2025-06-05 05:56:12] apptainer works
[2025-06-05 05:56:12] Set ATHENA_PROC_NUMBER=8
[2025-06-05 05:56:12] Set ATHENA_CORE_NUMBER=8
[2025-06-05 05:56:12] Starting ATLAS job with PandaID=6667928321
[2025-06-05 05:56:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:10:25]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:10:25] 2025-06-05 12:10:00,012 | INFO     | executing command: lscpu
[2025-06-05 08:10:25] 2025-06-05 12:10:00,104 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 08:10:25] 2025-06-05 12:10:00,678 | INFO     | PID=997006 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 08:10:25] 2025-06-05 12:10:00,678 | INFO     | .. there are 33 such processes running
[2025-06-05 08:10:25] 2025-06-05 12:10:02,462 | INFO     | monitor loop #551: job 0:6667928321 is in state 'finished'
[2025-06-05 08:10:25] 2025-06-05 12:10:02,462 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:10:25] 2025-06-05 12:10:04,513 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 08:10:25] 2025-06-05 12:10:04,514 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667928321/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:10:25] 2025-06-05 12:10:04,515 | INFO     | extracted standard info from prmon json
[2025-06-05 08:10:25] 2025-06-05 12:10:04,515 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:10:25] 2025-06-05 12:10:04,515 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:10:25] 2025-06-05 12:10:04,516 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:10:25] 2025-06-05 12:10:04,516 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:10:25] 2025-06-05 12:10:04,519 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:10:25] 2025-06-05 12:10:04,520 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,520 | INFO     | sum of deviations: 3450666482.9999995
[2025-06-05 08:10:25] 2025-06-05 12:10:04,521 | INFO     | mean x: 1749121381.0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,521 | INFO     | mean y: 2209654.1297709923
[2025-06-05 08:10:25] 2025-06-05 12:10:04,521 | INFO     | -- intersect: -8656554905.666647
[2025-06-05 08:10:25] 2025-06-05 12:10:04,521 | INFO     | intersect: -8656554905.666647
[2025-06-05 08:10:25] 2025-06-05 12:10:04,521 | INFO     | chi2: 1.5371512424365552
[2025-06-05 08:10:25] 2025-06-05 12:10:04,522 | INFO     | sum of square deviations: 620244187.5
[2025-06-05 08:10:25] 2025-06-05 12:10:04,522 | INFO     | sum of deviations: 3875859297.0000024
[2025-06-05 08:10:25] 2025-06-05 12:10:04,523 | INFO     | mean x: 1749121228.5
[2025-06-05 08:10:25] 2025-06-05 12:10:04,523 | INFO     | mean y: 2210466.5555555555
[2025-06-05 08:10:25] 2025-06-05 12:10:04,523 | INFO     | -- intersect: -10927916589.34981
[2025-06-05 08:10:25] 2025-06-05 12:10:04,523 | INFO     | intersect: -10927916589.34981
[2025-06-05 08:10:25] 2025-06-05 12:10:04,523 | INFO     | chi2: 1.538074897070187
[2025-06-05 08:10:25] 2025-06-05 12:10:04,523 | INFO     | current chi2=1.538074897070187 (change=-0.0600887283002588 %)
[2025-06-05 08:10:25] 2025-06-05 12:10:04,523 | INFO     | right removable region: 125
[2025-06-05 08:10:25] 2025-06-05 12:10:04,524 | INFO     | sum of square deviations: 620244187.5
[2025-06-05 08:10:25] 2025-06-05 12:10:04,524 | INFO     | sum of deviations: -12848967440.500002
[2025-06-05 08:10:25] 2025-06-05 12:10:04,525 | INFO     | mean x: 1749121533.5
[2025-06-05 08:10:25] 2025-06-05 12:10:04,525 | INFO     | mean y: 2241445.23015873
[2025-06-05 08:10:25] 2025-06-05 12:10:04,525 | INFO     | -- intersect: 36237011695.9694
[2025-06-05 08:10:25] 2025-06-05 12:10:04,525 | INFO     | intersect: 36237011695.9694
[2025-06-05 08:10:25] 2025-06-05 12:10:04,525 | INFO     | chi2: 0.18505876708600208
[2025-06-05 08:10:25] 2025-06-05 12:10:04,525 | INFO     | current chi2=0.18505876708600208 (change=87.96092655185555 %)
[2025-06-05 08:10:25] 2025-06-05 12:10:04,525 | INFO     | sum of square deviations: 549294020.0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,526 | INFO     | sum of deviations: -8517313063.0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,526 | INFO     | mean x: 1749121686.0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,526 | INFO     | mean y: 2232030.4297520663
[2025-06-05 08:10:25] 2025-06-05 12:10:04,527 | INFO     | -- intersect: 27123985485.79121
[2025-06-05 08:10:25] 2025-06-05 12:10:04,527 | INFO     | intersect: 27123985485.79121
[2025-06-05 08:10:25] 2025-06-05 12:10:04,527 | INFO     | chi2: 0.1460759373631293
[2025-06-05 08:10:25] 2025-06-05 12:10:04,527 | INFO     | current chi2=0.1460759373631293 (change=21.065108309489794 %)
[2025-06-05 08:10:25] 2025-06-05 12:10:04,527 | INFO     | left removable region: 20
[2025-06-05 08:10:25] 2025-06-05 12:10:04,527 | INFO     | sum of square deviations: 358927660.0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,528 | INFO     | sum of deviations: -247847635.99999982
[2025-06-05 08:10:25] 2025-06-05 12:10:04,528 | INFO     | mean x: 1749121808.0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,528 | INFO     | mean y: 2216477.580952381
[2025-06-05 08:10:25] 2025-06-05 12:10:04,528 | INFO     | -- intersect: 1210024494.351924
[2025-06-05 08:10:25] 2025-06-05 12:10:04,528 | INFO     | intersect: 1210024494.351924
[2025-06-05 08:10:25] 2025-06-05 12:10:04,529 | INFO     | chi2: 0.028547540230888395
[2025-06-05 08:10:25] 2025-06-05 12:10:04,529 | INFO     | -- intersect: 1210024494.351924
[2025-06-05 08:10:25] 2025-06-05 12:10:04,529 | INFO     | current memory leak: -0.69 B/s (using 105 data points, chi2=0.03)
[2025-06-05 08:10:25] 2025-06-05 12:10:04,530 | INFO     | ..............................
[2025-06-05 08:10:25] 2025-06-05 12:10:04,530 | INFO     | . Timing measurements:
[2025-06-05 08:10:25] 2025-06-05 12:10:04,530 | INFO     | . get job = 0 s
[2025-06-05 08:10:25] 2025-06-05 12:10:04,530 | INFO     | . initial setup = 3 s
[2025-06-05 08:10:25] 2025-06-05 12:10:04,530 | INFO     | . payload setup = 8 s
[2025-06-05 08:10:25] 2025-06-05 12:10:04,530 | INFO     | . stage-in = 0 s
[2025-06-05 08:10:25] 2025-06-05 12:10:04,530 | INFO     | . payload execution = 7983 s
[2025-06-05 08:10:25] 2025-06-05 12:10:04,530 | INFO     | . stage-out = 0 s
[2025-06-05 08:10:25] 2025-06-05 12:10:04,530 | INFO     | . log creation = 0 s
[2025-06-05 08:10:25] 2025-06-05 12:10:04,530 | INFO     | ..............................
[2025-06-05 08:10:25] 2025-06-05 12:10:04,627 | INFO     | 
[2025-06-05 08:10:25] 2025-06-05 12:10:04,627 | INFO     | job summary report
[2025-06-05 08:10:25] 2025-06-05 12:10:04,627 | INFO     | --------------------------------------------------
[2025-06-05 08:10:25] 2025-06-05 12:10:04,627 | INFO     | PanDA job id: 6667928321
[2025-06-05 08:10:25] 2025-06-05 12:10:04,627 | INFO     | task id: 44871837
[2025-06-05 08:10:25] 2025-06-05 12:10:04,627 | INFO     | errors: (none)
[2025-06-05 08:10:25] 2025-06-05 12:10:04,627 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | pilot state: finished 
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | transexitcode: 0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | exeerrorcode: 0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | exeerrordiag: 
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | exitcode: 0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | exitmsg: OK
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | cpuconsumptiontime: 54172 s
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | nevents: 400
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | neventsw: 0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | pid: 1003905
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | pgrp: 1003905
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | corecount: 8
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | event service: False
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | sizes: {0: 2397221, 1: 2397420, 6: 2397626, 12: 2397654, 7994: 2425164, 7995: 2425163, 7996: 2434344, 8002: 2434458}
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | --------------------------------------------------
[2025-06-05 08:10:25] 2025-06-05 12:10:04,628 | INFO     | 
[2025-06-05 08:10:25] 2025-06-05 12:10:04,629 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 08:10:25] 2025-06-05 12:10:04,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,652 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,652 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,652 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,653 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:10:25] 2025-06-05 12:10:04,654 | INFO     | job 6667928321 has completed (purged errors)
[2025-06-05 08:10:25] 2025-06-05 12:10:04,654 | INFO     | overall cleanup function is called
[2025-06-05 08:10:25] 2025-06-05 12:10:05,663 | INFO     | --- collectZombieJob: --- 10, [1003905]
[2025-06-05 08:10:25] 2025-06-05 12:10:05,663 | INFO     | zombie collector waiting for pid 1003905
[2025-06-05 08:10:25] 2025-06-05 12:10:05,663 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:10:25] 2025-06-05 12:10:05,664 | INFO     | collected zombie processes
[2025-06-05 08:10:25] 2025-06-05 12:10:05,664 | INFO     | will attempt to kill all subprocesses of pid=1003905
[2025-06-05 08:10:25] 2025-06-05 12:10:06,044 | INFO     | process IDs to be killed: [1003905] (in reverse order)
[2025-06-05 08:10:25] 2025-06-05 12:10:06,173 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:10:25] 2025-06-05 12:10:06,174 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:10:25] 2025-06-05 12:10:06,192 | INFO     | did not find any defunct processes belonging to 1003905
[2025-06-05 08:10:25] 2025-06-05 12:10:06,210 | INFO     | did not find any defunct processes belonging to 1003905
[2025-06-05 08:10:25] 2025-06-05 12:10:06,211 | INFO     | ready for new job
[2025-06-05 08:10:25] 2025-06-05 12:10:06,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:10:25] 2025-06-05 12:10:06,213 | INFO     | **************************************
[2025-06-05 08:10:25] 2025-06-05 12:10:06,213 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:10:25] 2025-06-05 12:10:06,213 | INFO     | **************************************
[2025-06-05 08:10:25] 2025-06-05 12:10:06,213 | INFO     | 
[2025-06-05 08:10:25] 2025-06-05 12:10:06,232 | INFO     | architecture information:
[2025-06-05 08:10:25] 2025-06-05 12:10:06,233 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:10:25] 2025-06-05 12:10:06,252 | INFO     | cat /etc/os-release:
[2025-06-05 08:10:25] NAME="CentOS Linux"
[2025-06-05 08:10:25] VERSION="7 (Core)"
[2025-06-05 08:10:25] ID="centos"
[2025-06-05 08:10:25] ID_LIKE="rhel fedora"
[2025-06-05 08:10:25] VERSION_ID="7"
[2025-06-05 08:10:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:10:25] ANSI_COLOR="0;31"
[2025-06-05 08:10:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:10:25] HOME_URL="https://www.centos.org/"
[2025-06-05 08:10:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:10:25] 
[2025-06-05 08:10:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:10:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:10:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:10:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:10:25] 
[2025-06-05 08:10:25] 2025-06-05 12:10:06,253 | INFO     | **************************************
[2025-06-05 08:10:25] 2025-06-05 12:10:06,755 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 08:10:25] 2025-06-05 12:10:06,773 | INFO     | sufficient remaining disk space (96592723968 B)
[2025-06-05 08:10:25] 2025-06-05 12:10:06,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:10:25] 2025-06-05 12:10:06,774 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:10:25] 2025-06-05 12:10:06,774 | INFO     | update_server=False
[2025-06-05 08:10:25] 2025-06-05 12:10:06,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:10:25] 2025-06-05 12:10:06,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:10:25] 2025-06-05 12:10:06,775 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:10:25] 2025-06-05 12:10:06,775 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:10:25] 2025-06-05 12:10:06,775 | INFO     | aborting loop
[2025-06-05 08:10:25] 2025-06-05 12:10:06,776 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:10:25] 2025-06-05 12:10:06,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:10:25] 2025-06-05 12:10:06,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:10:25] 2025-06-05 12:10:07,779 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:07,782 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:07,861 | INFO     | all data control threads have been joined
[2025-06-05 08:10:25] 2025-06-05 12:10:07,918 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:08,098 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:08,137 | INFO     | all job control threads have been joined
[2025-06-05 08:10:25] 2025-06-05 12:10:08,180 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:08,274 | INFO     | all payload control threads have been joined
[2025-06-05 08:10:25] 2025-06-05 12:10:08,318 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:08,464 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:08,782 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:08,867 | INFO     | [data] control thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:08,891 | INFO     | [job] validate thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:08,979 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:10:25] 2025-06-05 12:10:09,142 | INFO     | [job] control thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:09,207 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:09,280 | INFO     | [payload] control thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:09,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:10:25] 2025-06-05 12:10:10,644 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:12,987 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:17,556 | INFO     | job.realtimelogging is not enabled
[2025-06-05 08:10:25] 2025-06-05 12:10:18,561 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:10:25] 2025-06-05 12:10:20,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140527820072768)>', '<ExcThread(monitor, started 140527462754048)>']
[2025-06-05 08:10:25] 2025-06-05 12:10:20,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:10:25] 2025-06-05 12:10:20,848 | INFO     | [monitor] control thread has ended
[2025-06-05 08:10:25] 2025-06-05 12:10:25,119 | INFO     | all workflow threads have been joined
[2025-06-05 08:10:25] 2025-06-05 12:10:25,119 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:10:25] 2025-06-05 12:10:25,119 | INFO     | traces error code: 0
[2025-06-05 08:10:25] 2025-06-05 12:10:25,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:10:25] 2025-06-05 12:10:25,320 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:10:25] 2025-06-05 12:10:25,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:10:25] 2025-06-05 12:10:25,327 [wrapper] pilotpid: 997006
[2025-06-05 08:10:25] 2025-06-05 12:10:25,330 [wrapper] Pilot exit status: 0
[2025-06-05 08:10:25] 2025-06-05 12:10:25,343 [wrapper] pandaids: 6667928321
[2025-06-05 08:10:25] 2025-06-05 12:10:25,439 [wrapper] cleanup supervisor_pilot 1777808 997007
[2025-06-05 08:10:25] 2025-06-05 12:10:25,443 [wrapper] Test setup, not cleaning
[2025-06-05 08:10:25] 2025-06-05 12:10:25,446 [wrapper] apfmon messages muted
[2025-06-05 08:10:25] 2025-06-05 12:10:25,449 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:10:25] 2025-06-05 12:10:25,453 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:10:25]  *** Error codes and diagnostics ***
[2025-06-05 08:10:25]     "exeErrorCode": 0,
[2025-06-05 08:10:25]     "exeErrorDiag": "",
[2025-06-05 08:10:25]     "pilotErrorCode": 0,
[2025-06-05 08:10:25]     "pilotErrorDiag": "",
[2025-06-05 08:10:25]  *** Listing of results directory ***
[2025-06-05 08:10:25] total 422488
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas    495897 May 27 23:41 pilot3.tar.gz
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas      5111 May 28 00:05 queuedata.json
[2025-06-05 08:10:25] -rwx------. 1 boincer umatlas     37140 May 28 00:05 runpilot2-wrapper.sh
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas       100 Jun  5 05:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:10:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 05:56 run_atlas
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas       105 Jun  5 05:56 job.xml
[2025-06-05 08:10:25] -rw-r--r--. 2 boincer umatlas 226471617 Jun  5 05:56 EVNT.44871834._003068.pool.root.1
[2025-06-05 08:10:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 05:56 start_atlas.sh
[2025-06-05 08:10:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 05:56 shared
[2025-06-05 08:10:25] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 05:56 input.tar.gz
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas         0 Jun  5 05:56 boinc_lockfile
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 05:56 pandaJob.out
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas    983289 Jun  5 05:56 agis_schedconf.cvmfs.json
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas   1598969 Jun  5 05:56 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:10:25] drwx------. 4 boincer umatlas      4096 Jun  5 05:56 pilot3
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas      6859 Jun  5 08:09 init_data.xml
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas 200173280 Jun  5 08:09 HITS.44871837._078480.pool.root.1
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas       529 Jun  5 08:09 boinc_task_state.xml
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas        95 Jun  5 08:09 pilot_heartbeat.json
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas      1043 Jun  5 08:09 memory_monitor_summary.json
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas    341834 Jun  5 08:09 log.44871837._078480.job.log.tgz.1
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas      7719 Jun  5 08:10 heartbeat.json
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 08:10 boinc_mmap_file
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas        27 Jun  5 08:10 wrapper_checkpoint.txt
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas      4548 Jun  5 08:10 pilotlog.txt
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas    730898 Jun  5 08:10 log.44871837._078480.job.log.1
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas       357 Jun  5 08:10 output.list
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas       620 Jun  5 08:10 runtime_log
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas   1095680 Jun  5 08:10 result.tar.gz
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas       655 Jun  5 08:10 zcXMDmJENe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTEbKDmvCQfTn.diag
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas      8669 Jun  5 08:10 runtime_log.err
[2025-06-05 08:10:25] -rw-r--r--. 1 boincer umatlas     21194 Jun  5 08:10 stderr.txt
[2025-06-05 08:10:25] HITS file was successfully produced:
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas 200173280 Jun  5 08:09 shared/HITS.pool.root.1
[2025-06-05 08:10:25]  *** Contents of shared directory: ***
[2025-06-05 08:10:25] total 418244
[2025-06-05 08:10:25] -rw-r--r--. 2 boincer umatlas 226471617 Jun  5 05:56 ATLAS.root_0
[2025-06-05 08:10:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 05:56 start_atlas.sh
[2025-06-05 08:10:25] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 05:56 input.tar.gz
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas 200173280 Jun  5 08:09 HITS.pool.root.1
[2025-06-05 08:10:25] -rw-------. 1 boincer umatlas   1095680 Jun  5 08:10 result.tar.gz
08:10:27 (991193): run_atlas exited; CPU time 54491.172150
08:10:27 (991193): called boinc_finish(0)

</stderr_txt>
]]>

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