Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:46:26 (21982): wrapper (7.7.26015): starting
05:46:26 (21982): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 05:46:26] Arguments: --nthreads 8
[2025-06-05 05:46:26] Threads: 8
[2025-06-05 05:46:26] Checking for CVMFS
[2025-06-05 05:46:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:46:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:46:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:46:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:46:27] 2.11.2.0 2885 19861 74408 146814 1 1 12563929 20275200 1 130560 0 7959933 99.981 3564854 4586 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 05:46:27] CVMFS is ok
[2025-06-05 05:46:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:46:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:46:27] Further information can be found at the LHC@home message board.
[2025-06-05 05:46:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:46:27] Checking for apptainer binary...
[2025-06-05 05:46:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:46:27] Running /usr/bin/apptainer --version
[2025-06-05 05:46:27] apptainer version 1.3.2-1.el7
[2025-06-05 05:46:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:46:29] c-204-6.aglt2.org
[2025-06-05 05:46:29] apptainer works
[2025-06-05 05:46:29] Set ATHENA_PROC_NUMBER=8
[2025-06-05 05:46:29] Set ATHENA_CORE_NUMBER=8
[2025-06-05 05:46:29] Starting ATLAS job with PandaID=6667923939
[2025-06-05 05:46:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:28:52]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:28:52] 2025-06-05 12:28:38,661 | INFO     | extracted standard info from prmon json
[2025-06-05 08:28:52] 2025-06-05 12:28:38,661 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:28:52] 2025-06-05 12:28:38,661 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:28:52] 2025-06-05 12:28:38,662 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:28:52] 2025-06-05 12:28:38,662 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:28:52] 2025-06-05 12:28:38,666 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:28:52] 2025-06-05 12:28:38,667 | INFO     | sum of square deviations: 1246386160.0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,668 | INFO     | sum of deviations: -665330904.0000038
[2025-06-05 08:28:52] 2025-06-05 12:28:38,668 | INFO     | mean x: 1749121660.0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,668 | INFO     | mean y: 2491252.647798742
[2025-06-05 08:28:52] 2025-06-05 12:28:38,668 | INFO     | -- intersect: 936186388.7152494
[2025-06-05 08:28:52] 2025-06-05 12:28:38,668 | INFO     | intersect: 936186388.7152494
[2025-06-05 08:28:52] 2025-06-05 12:28:38,669 | INFO     | chi2: 2.4801470662408365
[2025-06-05 08:28:52] 2025-06-05 12:28:38,669 | INFO     | sum of square deviations: 1132458442.5
[2025-06-05 08:28:52] 2025-06-05 12:28:38,670 | INFO     | sum of deviations: 10228066908.0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,671 | INFO     | mean x: 1749121507.5
[2025-06-05 08:28:52] 2025-06-05 12:28:38,671 | INFO     | mean y: 2505456.896103896
[2025-06-05 08:28:52] 2025-06-05 12:28:38,671 | INFO     | -- intersect: -15795100121.8462
[2025-06-05 08:28:52] 2025-06-05 12:28:38,671 | INFO     | intersect: -15795100121.8462
[2025-06-05 08:28:52] 2025-06-05 12:28:38,671 | INFO     | chi2: 1.6369215246932947
[2025-06-05 08:28:52] 2025-06-05 12:28:38,672 | INFO     | current chi2=1.6369215246932947 (change=33.99901372887618 %)
[2025-06-05 08:28:52] 2025-06-05 12:28:38,672 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,673 | INFO     | sum of deviations: 9853362086.000002
[2025-06-05 08:28:52] 2025-06-05 12:28:38,673 | INFO     | mean x: 1749121355.0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,673 | INFO     | mean y: 2504921.523489933
[2025-06-05 08:28:52] 2025-06-05 12:28:38,673 | INFO     | -- intersect: -16800490829.858953
[2025-06-05 08:28:52] 2025-06-05 12:28:38,674 | INFO     | intersect: -16800490829.858953
[2025-06-05 08:28:52] 2025-06-05 12:28:38,674 | INFO     | chi2: 1.6385128418174055
[2025-06-05 08:28:52] 2025-06-05 12:28:38,674 | INFO     | current chi2=1.6385128418174055 (change=-0.09721401423987198 %)
[2025-06-05 08:28:52] 2025-06-05 12:28:38,674 | INFO     | right removable region: 148
[2025-06-05 08:28:52] 2025-06-05 12:28:38,675 | INFO     | sum of square deviations: 1132458442.5
[2025-06-05 08:28:52] 2025-06-05 12:28:38,675 | INFO     | sum of deviations: -25362177613.5
[2025-06-05 08:28:52] 2025-06-05 12:28:38,675 | INFO     | mean x: 1749121812.5
[2025-06-05 08:28:52] 2025-06-05 12:28:38,676 | INFO     | mean y: 2523864.448051948
[2025-06-05 08:28:52] 2025-06-05 12:28:38,676 | INFO     | -- intersect: 39175297373.32853
[2025-06-05 08:28:52] 2025-06-05 12:28:38,676 | INFO     | intersect: 39175297373.32853
[2025-06-05 08:28:52] 2025-06-05 12:28:38,676 | INFO     | chi2: 1.004530894295894
[2025-06-05 08:28:52] 2025-06-05 12:28:38,676 | INFO     | current chi2=1.004530894295894 (change=59.497123861349756 %)
[2025-06-05 08:28:52] 2025-06-05 12:28:38,677 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,677 | INFO     | sum of deviations: -22633910127.0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,677 | INFO     | mean x: 1749121965.0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,678 | INFO     | mean y: 2519900.590604027
[2025-06-05 08:28:52] 2025-06-05 12:28:38,678 | INFO     | -- intersect: 38600272121.218704
[2025-06-05 08:28:52] 2025-06-05 12:28:38,678 | INFO     | intersect: 38600272121.218704
[2025-06-05 08:28:52] 2025-06-05 12:28:38,678 | INFO     | chi2: 0.9928278715231642
[2025-06-05 08:28:52] 2025-06-05 12:28:38,678 | INFO     | current chi2=0.9928278715231642 (change=1.1650236781351284 %)
[2025-06-05 08:28:52] 2025-06-05 12:28:38,678 | INFO     | left removable region: 20
[2025-06-05 08:28:52] 2025-06-05 12:28:38,679 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,679 | INFO     | sum of deviations: -1924319206.5
[2025-06-05 08:28:52] 2025-06-05 12:28:38,679 | INFO     | mean x: 1749121934.5
[2025-06-05 08:28:52] 2025-06-05 12:28:38,679 | INFO     | mean y: 2519175.3828125
[2025-06-05 08:28:52] 2025-06-05 12:28:38,680 | INFO     | -- intersect: 5178770750.508275
[2025-06-05 08:28:52] 2025-06-05 12:28:38,680 | INFO     | intersect: 5178770750.508275
[2025-06-05 08:28:52] 2025-06-05 12:28:38,680 | INFO     | chi2: 0.05508852009164937
[2025-06-05 08:28:52] 2025-06-05 12:28:38,680 | INFO     | -- intersect: 5178770750.508275
[2025-06-05 08:28:52] 2025-06-05 12:28:38,680 | INFO     | current memory leak: -2.96 B/s (using 128 data points, chi2=0.06)
[2025-06-05 08:28:52] 2025-06-05 12:28:38,681 | INFO     | ..............................
[2025-06-05 08:28:52] 2025-06-05 12:28:38,681 | INFO     | . Timing measurements:
[2025-06-05 08:28:52] 2025-06-05 12:28:38,681 | INFO     | . get job = 0 s
[2025-06-05 08:28:52] 2025-06-05 12:28:38,681 | INFO     | . initial setup = 3 s
[2025-06-05 08:28:52] 2025-06-05 12:28:38,681 | INFO     | . payload setup = 11 s
[2025-06-05 08:28:52] 2025-06-05 12:28:38,681 | INFO     | . stage-in = 0 s
[2025-06-05 08:28:52] 2025-06-05 12:28:38,681 | INFO     | . payload execution = 9668 s
[2025-06-05 08:28:52] 2025-06-05 12:28:38,681 | INFO     | . stage-out = 0 s
[2025-06-05 08:28:52] 2025-06-05 12:28:38,682 | INFO     | . log creation = 0 s
[2025-06-05 08:28:52] 2025-06-05 12:28:38,682 | INFO     | ..............................
[2025-06-05 08:28:52] 2025-06-05 12:28:38,774 | INFO     | 
[2025-06-05 08:28:52] 2025-06-05 12:28:38,775 | INFO     | job summary report
[2025-06-05 08:28:52] 2025-06-05 12:28:38,775 | INFO     | --------------------------------------------------
[2025-06-05 08:28:52] 2025-06-05 12:28:38,775 | INFO     | PanDA job id: 6667923939
[2025-06-05 08:28:52] 2025-06-05 12:28:38,775 | INFO     | task id: 44871837
[2025-06-05 08:28:52] 2025-06-05 12:28:38,775 | INFO     | errors: (none)
[2025-06-05 08:28:52] 2025-06-05 12:28:38,776 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:28:52] 2025-06-05 12:28:38,776 | INFO     | pilot state: finished 
[2025-06-05 08:28:52] 2025-06-05 12:28:38,776 | INFO     | transexitcode: 0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,776 | INFO     | exeerrorcode: 0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,776 | INFO     | exeerrordiag: 
[2025-06-05 08:28:52] 2025-06-05 12:28:38,776 | INFO     | exitcode: 0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,777 | INFO     | exitmsg: OK
[2025-06-05 08:28:52] 2025-06-05 12:28:38,777 | INFO     | cpuconsumptiontime: 72338 s
[2025-06-05 08:28:52] 2025-06-05 12:28:38,777 | INFO     | nevents: 400
[2025-06-05 08:28:52] 2025-06-05 12:28:38,777 | INFO     | neventsw: 0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,777 | INFO     | pid: 32208
[2025-06-05 08:28:52] 2025-06-05 12:28:38,777 | INFO     | pgrp: 32208
[2025-06-05 08:28:52] 2025-06-05 12:28:38,778 | INFO     | corecount: 8
[2025-06-05 08:28:52] 2025-06-05 12:28:38,778 | INFO     | event service: False
[2025-06-05 08:28:52] 2025-06-05 12:28:38,778 | INFO     | sizes: {0: 2397221, 1: 2397420, 7: 2397626, 12: 2397654, 9683: 2425943, 9684: 2425942, 9685: 2435067, 9688: 2435123, 9695: 2435293}
[2025-06-05 08:28:52] 2025-06-05 12:28:38,778 | INFO     | --------------------------------------------------
[2025-06-05 08:28:52] 2025-06-05 12:28:38,778 | INFO     | 
[2025-06-05 08:28:52] 2025-06-05 12:28:38,779 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 08:28:52] 2025-06-05 12:28:38,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,813 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:28:52] 2025-06-05 12:28:38,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,813 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:28:52] 2025-06-05 12:28:38,813 | INFO     | job 6667923939 has completed (purged errors)
[2025-06-05 08:28:52] 2025-06-05 12:28:38,814 | INFO     | overall cleanup function is called
[2025-06-05 08:28:52] 2025-06-05 12:28:39,822 | INFO     | --- collectZombieJob: --- 10, [32208]
[2025-06-05 08:28:52] 2025-06-05 12:28:39,823 | INFO     | zombie collector waiting for pid 32208
[2025-06-05 08:28:52] 2025-06-05 12:28:39,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:28:52] 2025-06-05 12:28:39,823 | INFO     | collected zombie processes
[2025-06-05 08:28:52] 2025-06-05 12:28:39,823 | INFO     | will attempt to kill all subprocesses of pid=32208
[2025-06-05 08:28:52] 2025-06-05 12:28:39,925 | INFO     | process IDs to be killed: [32208] (in reverse order)
[2025-06-05 08:28:52] 2025-06-05 12:28:39,982 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:28:52] 2025-06-05 12:28:39,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:28:52] 2025-06-05 12:28:39,986 | INFO     | did not find any defunct processes belonging to 32208
[2025-06-05 08:28:52] 2025-06-05 12:28:39,989 | INFO     | did not find any defunct processes belonging to 32208
[2025-06-05 08:28:52] 2025-06-05 12:28:39,989 | INFO     | ready for new job
[2025-06-05 08:28:52] 2025-06-05 12:28:39,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:28:52] 2025-06-05 12:28:39,991 | INFO     | **************************************
[2025-06-05 08:28:52] 2025-06-05 12:28:39,991 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:28:52] 2025-06-05 12:28:39,991 | INFO     | **************************************
[2025-06-05 08:28:52] 2025-06-05 12:28:39,991 | INFO     | 
[2025-06-05 08:28:52] 2025-06-05 12:28:39,992 | INFO     | architecture information:
[2025-06-05 08:28:52] 2025-06-05 12:28:39,992 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:28:52] 2025-06-05 12:28:40,009 | INFO     | cat /etc/os-release:
[2025-06-05 08:28:52] NAME="CentOS Linux"
[2025-06-05 08:28:52] VERSION="7 (Core)"
[2025-06-05 08:28:52] ID="centos"
[2025-06-05 08:28:52] ID_LIKE="rhel fedora"
[2025-06-05 08:28:52] VERSION_ID="7"
[2025-06-05 08:28:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:28:52] ANSI_COLOR="0;31"
[2025-06-05 08:28:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:28:52] HOME_URL="https://www.centos.org/"
[2025-06-05 08:28:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:28:52] 
[2025-06-05 08:28:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:28:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:28:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:28:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:28:52] 
[2025-06-05 08:28:52] 2025-06-05 12:28:40,009 | INFO     | **************************************
[2025-06-05 08:28:52] 2025-06-05 12:28:40,513 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 08:28:52] 2025-06-05 12:28:40,533 | INFO     | sufficient remaining disk space (18606981120 B)
[2025-06-05 08:28:52] 2025-06-05 12:28:40,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:28:52] 2025-06-05 12:28:40,534 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:28:52] 2025-06-05 12:28:40,534 | INFO     | update_server=False
[2025-06-05 08:28:52] 2025-06-05 12:28:40,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:28:52] 2025-06-05 12:28:40,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:28:52] 2025-06-05 12:28:40,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:28:52] 2025-06-05 12:28:40,557 | INFO     | all job control threads have been joined
[2025-06-05 08:28:52] 2025-06-05 12:28:40,570 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 08:28:52] 2025-06-05 12:28:40,570 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 08:28:52] 2025-06-05 12:28:40,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:28:52] 2025-06-05 12:28:40,571 | INFO     | will abort loop
[2025-06-05 08:28:52] 2025-06-05 12:28:40,667 | INFO     | all data control threads have been joined
[2025-06-05 08:28:52] 2025-06-05 12:28:40,974 | INFO     | all payload control threads have been joined
[2025-06-05 08:28:52] 2025-06-05 12:28:41,073 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:28:52] 2025-06-05 12:28:41,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:28:52] 2025-06-05 12:28:41,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:28:52] 2025-06-05 12:28:41,536 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:41,540 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:41,562 | INFO     | [job] control thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:41,576 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:41,577 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:41,672 | INFO     | [data] control thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:41,691 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:41,809 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:41,980 | INFO     | [payload] control thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:42,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:28:52] 2025-06-05 12:28:42,261 | INFO     | [job] validate thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:42,541 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:42,680 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:42,683 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:42,709 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:42,804 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:46,100 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:28:52] 2025-06-05 12:28:47,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298295138112)>', '<ExcThread(monitor, started 140297547785984)>']
[2025-06-05 08:28:52] 2025-06-05 12:28:48,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:28:52] 2025-06-05 12:28:48,106 | INFO     | [monitor] control thread has ended
[2025-06-05 08:28:52] 2025-06-05 12:28:52,141 | INFO     | all workflow threads have been joined
[2025-06-05 08:28:52] 2025-06-05 12:28:52,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:28:52] 2025-06-05 12:28:52,156 | INFO     | traces error code: 0
[2025-06-05 08:28:52] 2025-06-05 12:28:52,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:28:52] 2025-06-05 12:28:52,298 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:28:52] 2025-06-05 12:28:52,302 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:28:52] 2025-06-05 12:28:52,306 [wrapper] pilotpid: 25655
[2025-06-05 08:28:52] 2025-06-05 12:28:52,311 [wrapper] Pilot exit status: 0
[2025-06-05 08:28:52] 2025-06-05 12:28:52,330 [wrapper] pandaids: 6667923939
[2025-06-05 08:28:52] 2025-06-05 12:28:52,376 [wrapper] cleanup supervisor_pilot 26491 25656
[2025-06-05 08:28:52] 2025-06-05 12:28:52,380 [wrapper] Test setup, not cleaning
[2025-06-05 08:28:52] 2025-06-05 12:28:52,385 [wrapper] apfmon messages muted
[2025-06-05 08:28:52] 2025-06-05 12:28:52,390 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:28:52] 2025-06-05 12:28:52,394 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:28:52]  *** Error codes and diagnostics ***
[2025-06-05 08:28:52]     "exeErrorCode": 0,
[2025-06-05 08:28:52]     "exeErrorDiag": "",
[2025-06-05 08:28:52]     "pilotErrorCode": 0,
[2025-06-05 08:28:52]     "pilotErrorDiag": "",
[2025-06-05 08:28:52]  *** Listing of results directory ***
[2025-06-05 08:28:52] total 415588
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas    495897 May 27 22:39 pilot3.tar.gz
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas      5111 May 27 23:32 queuedata.json
[2025-06-05 08:28:52] -rwx------ 1 boincer umatlas     37140 May 27 23:32 runpilot2-wrapper.sh
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas       100 Jun  5 05:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:28:52] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 05:46 run_atlas
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas       105 Jun  5 05:46 job.xml
[2025-06-05 08:28:52] -rw-r--r-- 2 boincer umatlas 223204170 Jun  5 05:46 EVNT.44871834._003054.pool.root.1
[2025-06-05 08:28:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 05:46 start_atlas.sh
[2025-06-05 08:28:52] drwxrwx--x 2 boincer umatlas      4096 Jun  5 05:46 shared
[2025-06-05 08:28:52] -rw-r--r-- 2 boincer umatlas    508881 Jun  5 05:46 input.tar.gz
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas         0 Jun  5 05:46 boinc_lockfile
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 05:46 pandaJob.out
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas    983289 Jun  5 05:46 agis_schedconf.cvmfs.json
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas   1598969 Jun  5 05:46 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:28:52] drwx------ 4 boincer umatlas      4096 Jun  5 05:46 pilot3
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas      5823 Jun  5 08:18 init_data.xml
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas 196080573 Jun  5 08:27 HITS.44871837._078125.pool.root.1
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas        95 Jun  5 08:28 pilot_heartbeat.json
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas       530 Jun  5 08:28 boinc_task_state.xml
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas      1048 Jun  5 08:28 memory_monitor_summary.json
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas    348677 Jun  5 08:28 log.44871837._078125.job.log.tgz.1
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas      7744 Jun  5 08:28 heartbeat.json
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas      4539 Jun  5 08:28 pilotlog.txt
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas        27 Jun  5 08:28 wrapper_checkpoint.txt
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas    873705 Jun  5 08:28 log.44871837._078125.job.log.1
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 08:28 boinc_mmap_file
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas       357 Jun  5 08:28 output.list
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas       620 Jun  5 08:28 runtime_log
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas   1239040 Jun  5 08:28 result.tar.gz
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas      8654 Jun  5 08:28 runtime_log.err
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas       660 Jun  5 08:28 Lg2LDmMiMe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtrSKDmUpryyn.diag
[2025-06-05 08:28:52] -rw-r--r-- 1 boincer umatlas     20750 Jun  5 08:28 stderr.txt
[2025-06-05 08:28:52] HITS file was successfully produced:
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas 196080573 Jun  5 08:27 shared/HITS.pool.root.1
[2025-06-05 08:28:52]  *** Contents of shared directory: ***
[2025-06-05 08:28:52] total 411196
[2025-06-05 08:28:52] -rw-r--r-- 2 boincer umatlas 223204170 Jun  5 05:46 ATLAS.root_0
[2025-06-05 08:28:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 05:46 start_atlas.sh
[2025-06-05 08:28:52] -rw-r--r-- 2 boincer umatlas    508881 Jun  5 05:46 input.tar.gz
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas 196080573 Jun  5 08:27 HITS.pool.root.1
[2025-06-05 08:28:52] -rw------- 1 boincer umatlas   1239040 Jun  5 08:28 result.tar.gz
08:28:54 (21982): run_atlas exited; CPU time 72310.029407
08:28:54 (21982): called boinc_finish(0)

</stderr_txt>
]]>

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