Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:06 (26848): wrapper (7.7.26015): starting
11:46:06 (26848): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 11:46:06] Arguments: --nthreads 8
[2025-06-05 11:46:06] Threads: 8
[2025-06-05 11:46:06] Checking for CVMFS
[2025-06-05 11:46:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 11:46:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 11:46:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 11:46:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 11:46:09] 2.11.2.0 31527 34628 87956 146814 1 159 13886787 25165824 3632 130560 0 18017075 99.860 18873939 2018 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 11:46:09] CVMFS is ok
[2025-06-05 11:46:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 11:46:09] Checking for apptainer binary...
[2025-06-05 11:46:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 11:46:09] Running /usr/bin/apptainer --version
[2025-06-05 11:46:09] apptainer version 1.3.2-1.el7
[2025-06-05 11:46:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 11:46:10] cg-vwn469.simple-grid.lan
[2025-06-05 11:46:10] apptainer works
[2025-06-05 11:46:10] Set ATHENA_PROC_NUMBER=8
[2025-06-05 11:46:10] Set ATHENA_CORE_NUMBER=8
[2025-06-05 11:46:10] Starting ATLAS job with PandaID=6667365415
[2025-06-05 11:46:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:51:05]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:51:05] 2025-06-05 14:40:04,363 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:51:05] 2025-06-05 14:40:04,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:51:05] 2025-06-05 14:40:04,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:51:05] 2025-06-05 14:40:04,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:51:05] 2025-06-05 14:40:04,369 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:51:05] 2025-06-05 14:40:04,370 | INFO     | sum of square deviations: 7330250928.0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,373 | INFO     | sum of deviations: 18595735076.0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,373 | INFO     | mean x: 1749125570.0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,373 | INFO     | mean y: 2487243.3972125435
[2025-06-05 16:51:05] 2025-06-05 14:40:04,373 | INFO     | -- intersect: -4434779097.668143
[2025-06-05 16:51:05] 2025-06-05 14:40:04,373 | INFO     | intersect: -4434779097.668143
[2025-06-05 16:51:05] 2025-06-05 14:40:04,374 | INFO     | chi2: 2.3246056081864763
[2025-06-05 16:51:05] 2025-06-05 14:40:04,374 | INFO     | sum of square deviations: 6953769450.5
[2025-06-05 16:51:05] 2025-06-05 14:40:04,377 | INFO     | sum of deviations: 36947910358.5
[2025-06-05 16:51:05] 2025-06-05 14:40:04,377 | INFO     | mean x: 1749125417.5
[2025-06-05 16:51:05] 2025-06-05 14:40:04,377 | INFO     | mean y: 2494568.074468085
[2025-06-05 16:51:05] 2025-06-05 14:40:04,377 | INFO     | -- intersect: -9291245983.953325
[2025-06-05 16:51:05] 2025-06-05 14:40:04,377 | INFO     | intersect: -9291245983.953325
[2025-06-05 16:51:05] 2025-06-05 14:40:04,378 | INFO     | chi2: 1.5540327139615286
[2025-06-05 16:51:05] 2025-06-05 14:40:04,378 | INFO     | current chi2=1.5540327139615286 (change=33.14854319852151 %)
[2025-06-05 16:51:05] 2025-06-05 14:40:04,378 | INFO     | sum of square deviations: 6590404498.0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,381 | INFO     | sum of deviations: 35902786470.0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,381 | INFO     | mean x: 1749125265.0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,381 | INFO     | mean y: 2494129.4079422383
[2025-06-05 16:51:05] 2025-06-05 14:40:04,381 | INFO     | -- intersect: -9526279243.703634
[2025-06-05 16:51:05] 2025-06-05 14:40:04,382 | INFO     | intersect: -9526279243.703634
[2025-06-05 16:51:05] 2025-06-05 14:40:04,382 | INFO     | chi2: 1.5545878513736817
[2025-06-05 16:51:05] 2025-06-05 14:40:04,382 | INFO     | current chi2=1.5545878513736817 (change=-0.03572237618717309 %)
[2025-06-05 16:51:05] 2025-06-05 14:40:04,382 | INFO     | right removable region: 276
[2025-06-05 16:51:05] 2025-06-05 14:40:04,383 | INFO     | sum of square deviations: 6953769450.5
[2025-06-05 16:51:05] 2025-06-05 14:40:04,385 | INFO     | sum of deviations: -24824003863.000004
[2025-06-05 16:51:05] 2025-06-05 14:40:04,386 | INFO     | mean x: 1749125722.5
[2025-06-05 16:51:05] 2025-06-05 14:40:04,386 | INFO     | mean y: 2504689.1276595746
[2025-06-05 16:51:05] 2025-06-05 14:40:04,386 | INFO     | -- intersect: 6246643785.382944
[2025-06-05 16:51:05] 2025-06-05 14:40:04,386 | INFO     | intersect: 6246643785.382944
[2025-06-05 16:51:05] 2025-06-05 14:40:04,387 | INFO     | chi2: 0.8941714946937022
[2025-06-05 16:51:05] 2025-06-05 14:40:04,387 | INFO     | current chi2=0.8941714946937022 (change=61.53448604164371 %)
[2025-06-05 16:51:05] 2025-06-05 14:40:04,387 | INFO     | sum of square deviations: 6590404498.0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,390 | INFO     | sum of deviations: -21511045795.0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,390 | INFO     | mean x: 1749125875.0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,390 | INFO     | mean y: 2503277.2093862817
[2025-06-05 16:51:05] 2025-06-05 14:40:04,390 | INFO     | -- intersect: 5711640980.329539
[2025-06-05 16:51:05] 2025-06-05 14:40:04,390 | INFO     | intersect: 5711640980.329539
[2025-06-05 16:51:05] 2025-06-05 14:40:04,391 | INFO     | chi2: 0.8775774018964981
[2025-06-05 16:51:05] 2025-06-05 14:40:04,391 | INFO     | current chi2=0.8775774018964981 (change=1.8558065086707247 %)
[2025-06-05 16:51:05] 2025-06-05 14:40:04,391 | INFO     | left removable region: 20
[2025-06-05 16:51:05] 2025-06-05 14:40:04,391 | INFO     | sum of square deviations: 5202255680.0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,393 | INFO     | sum of deviations: 14634583657.5
[2025-06-05 16:51:05] 2025-06-05 14:40:04,394 | INFO     | mean x: 1749125844.5
[2025-06-05 16:51:05] 2025-06-05 14:40:04,394 | INFO     | mean y: 2502253.66015625
[2025-06-05 16:51:05] 2025-06-05 14:40:04,394 | INFO     | -- intersect: -4918003402.615197
[2025-06-05 16:51:05] 2025-06-05 14:40:04,394 | INFO     | intersect: -4918003402.615197
[2025-06-05 16:51:05] 2025-06-05 14:40:04,394 | INFO     | chi2: 0.0026089000930663965
[2025-06-05 16:51:05] 2025-06-05 14:40:04,394 | INFO     | -- intersect: -4918003402.615197
[2025-06-05 16:51:05] 2025-06-05 14:40:04,395 | INFO     | current memory leak: 2.81 B/s (using 256 data points, chi2=0.00)
[2025-06-05 16:51:05] 2025-06-05 14:40:04,396 | INFO     | ..............................
[2025-06-05 16:51:05] 2025-06-05 14:40:04,396 | INFO     | . Timing measurements:
[2025-06-05 16:51:05] 2025-06-05 14:40:04,396 | INFO     | . get job = 0 s
[2025-06-05 16:51:05] 2025-06-05 14:40:04,396 | INFO     | . initial setup = 2 s
[2025-06-05 16:51:05] 2025-06-05 14:40:04,396 | INFO     | . payload setup = 13 s
[2025-06-05 16:51:05] 2025-06-05 14:40:04,396 | INFO     | . stage-in = 0 s
[2025-06-05 16:51:05] 2025-06-05 14:40:04,396 | INFO     | . payload execution = 17487 s
[2025-06-05 16:51:05] 2025-06-05 14:40:04,396 | INFO     | . stage-out = 3 s
[2025-06-05 16:51:05] 2025-06-05 14:40:04,396 | INFO     | . log creation = 1 s
[2025-06-05 16:51:05] 2025-06-05 14:40:04,396 | INFO     | ..............................
[2025-06-05 16:51:05] 2025-06-05 14:40:04,969 | INFO     | 
[2025-06-05 16:51:05] 2025-06-05 14:40:04,969 | INFO     | job summary report
[2025-06-05 16:51:05] 2025-06-05 14:40:04,969 | INFO     | --------------------------------------------------
[2025-06-05 16:51:05] 2025-06-05 14:40:04,969 | INFO     | PanDA job id: 6667365415
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | task id: 44871837
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | errors: (none)
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | pilot state: finished 
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | transexitcode: 0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | exeerrorcode: 0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | exeerrordiag: 
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | exitcode: 0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | exitmsg: OK
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | cpuconsumptiontime: 65648 s
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | nevents: 400
[2025-06-05 16:51:05] 2025-06-05 14:40:04,970 | INFO     | neventsw: 0
[2025-06-05 16:51:05] 2025-06-05 14:40:04,971 | INFO     | pid: 6710
[2025-06-05 16:51:05] 2025-06-05 14:40:04,971 | INFO     | pgrp: 6710
[2025-06-05 16:51:05] 2025-06-05 14:40:04,971 | INFO     | corecount: 8
[2025-06-05 16:51:05] 2025-06-05 14:40:04,971 | INFO     | event service: False
[2025-06-05 16:51:05] 2025-06-05 14:40:04,971 | INFO     | sizes: {0: 2397221, 1: 2397420, 11: 2397626, 12: 2397654, 17505: 2428912, 17509: 2437853, 17512: 2438037, 17592: 2438207}
[2025-06-05 16:51:05] 2025-06-05 14:40:04,971 | INFO     | --------------------------------------------------
[2025-06-05 16:51:05] 2025-06-05 14:40:04,971 | INFO     | 
[2025-06-05 16:51:05] 2025-06-05 14:40:04,971 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 16:51:05] 2025-06-05 14:40:05,327 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,327 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,329 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,329 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,329 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,329 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:51:05] 2025-06-05 14:40:05,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,329 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:51:05] 2025-06-05 14:40:05,329 | INFO     | job 6667365415 has completed (purged errors)
[2025-06-05 16:51:05] 2025-06-05 14:40:05,329 | INFO     | overall cleanup function is called
[2025-06-05 16:51:05] 2025-06-05 14:40:06,339 | INFO     | --- collectZombieJob: --- 10, [6710]
[2025-06-05 16:51:05] 2025-06-05 14:40:06,339 | INFO     | zombie collector waiting for pid 6710
[2025-06-05 16:51:05] 2025-06-05 14:40:06,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:51:05] 2025-06-05 14:40:06,339 | INFO     | collected zombie processes
[2025-06-05 16:51:05] 2025-06-05 14:40:06,340 | INFO     | will attempt to kill all subprocesses of pid=6710
[2025-06-05 16:51:05] 2025-06-05 14:40:06,467 | INFO     | process IDs to be killed: [6710] (in reverse order)
[2025-06-05 16:51:05] 2025-06-05 14:40:07,259 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:51:05] 2025-06-05 14:40:07,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:51:05] 2025-06-05 14:40:07,262 | INFO     | did not find any defunct processes belonging to 6710
[2025-06-05 16:51:05] 2025-06-05 14:40:07,265 | INFO     | did not find any defunct processes belonging to 6710
[2025-06-05 16:51:05] 2025-06-05 14:40:07,266 | INFO     | ready for new job
[2025-06-05 16:51:05] 2025-06-05 14:40:07,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:51:05] 2025-06-05 14:40:07,268 | INFO     | **************************************
[2025-06-05 16:51:05] 2025-06-05 14:40:07,268 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:51:05] 2025-06-05 14:40:07,268 | INFO     | **************************************
[2025-06-05 16:51:05] 2025-06-05 14:40:07,268 | INFO     | 
[2025-06-05 16:51:05] 2025-06-05 14:40:07,269 | INFO     | pilot is running in a VM
[2025-06-05 16:51:05] 2025-06-05 14:40:07,269 | INFO     | architecture information:
[2025-06-05 16:51:05] 2025-06-05 14:40:07,273 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:51:05] 2025-06-05 14:40:07,403 | INFO     | cat /etc/os-release:
[2025-06-05 16:51:05] NAME="CentOS Linux"
[2025-06-05 16:51:05] VERSION="7 (Core)"
[2025-06-05 16:51:05] ID="centos"
[2025-06-05 16:51:05] ID_LIKE="rhel fedora"
[2025-06-05 16:51:05] VERSION_ID="7"
[2025-06-05 16:51:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:51:05] ANSI_COLOR="0;31"
[2025-06-05 16:51:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:51:05] HOME_URL="https://www.centos.org/"
[2025-06-05 16:51:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:51:05] 
[2025-06-05 16:51:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:51:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:51:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:51:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:51:05] 
[2025-06-05 16:51:05] 2025-06-05 14:40:07,403 | INFO     | **************************************
[2025-06-05 16:51:05] 2025-06-05 14:40:07,907 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 16:51:05] 2025-06-05 14:40:08,042 | INFO     | sufficient remaining disk space (497151901696 B)
[2025-06-05 16:51:05] 2025-06-05 14:40:08,043 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:51:05] 2025-06-05 14:40:08,043 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:51:05] 2025-06-05 14:40:08,043 | INFO     | update_server=False
[2025-06-05 16:51:05] 2025-06-05 14:40:08,043 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:51:05] 2025-06-05 14:40:08,044 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 16:51:05] 2025-06-05 14:40:08,044 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:51:05] 2025-06-05 14:40:08,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:51:05] 2025-06-05 14:40:08,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:51:05] 2025-06-05 14:40:08,092 | INFO     | all data control threads have been joined
[2025-06-05 16:51:05] 2025-06-05 14:40:08,159 | INFO     | all payload control threads have been joined
[2025-06-05 16:51:05] 2025-06-05 14:40:08,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:51:05] 2025-06-05 14:40:08,960 | INFO     | aborting loop
[2025-06-05 16:51:05] 2025-06-05 14:40:09,048 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:09,098 | INFO     | [data] control thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:09,165 | INFO     | [payload] control thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:09,277 | INFO     | [job] validate thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:09,278 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:09,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:51:05] 2025-06-05 14:40:09,431 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:09,524 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:09,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:51:05] 2025-06-05 14:40:09,636 | INFO     | all job control threads have been joined
[2025-06-05 16:51:05] 2025-06-05 14:40:09,954 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:09,966 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:09,968 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:10,499 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:10,549 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:10,642 | INFO     | [job] control thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:11,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:51:05] 2025-06-05 14:40:11,389 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:15,329 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:18,651 | INFO     | job.realtimelogging is not enabled
[2025-06-05 16:51:05] 2025-06-05 14:40:19,657 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:51:05] 2025-06-05 14:40:20,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258982274880)>', '<ExcThread(monitor, started 140258683361024)>']
[2025-06-05 16:51:05] 2025-06-05 14:40:21,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:51:05] 2025-06-05 14:40:21,122 | INFO     | [monitor] control thread has ended
[2025-06-05 16:51:05] 2025-06-05 14:40:26,020 | INFO     | all workflow threads have been joined
[2025-06-05 16:51:05] 2025-06-05 14:40:26,020 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:51:05] 2025-06-05 14:40:26,021 | INFO     | traces error code: 0
[2025-06-05 16:51:05] 2025-06-05 14:40:26,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:51:05] 2025-06-05 14:40:26,475 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:51:05] 2025-06-05 14:40:26,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:51:05] 2025-06-05 14:40:26,723 [wrapper] pilotpid: 30503
[2025-06-05 16:51:05] 2025-06-05 14:40:26,830 [wrapper] Pilot exit status: 0
[2025-06-05 16:51:05] 2025-06-05 14:40:27,374 [wrapper] pandaids: 6667365415
[2025-06-05 16:51:05] 2025-06-05 14:40:28,090 [wrapper] cleanup supervisor_pilot  8024 30504
[2025-06-05 16:51:05] 2025-06-05 14:40:28,183 [wrapper] Test setup, not cleaning
[2025-06-05 16:51:05] 2025-06-05 14:40:28,255 [wrapper] apfmon messages muted
[2025-06-05 16:51:05] 2025-06-05 14:40:28,290 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:51:05] 2025-06-05 14:40:28,374 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:51:05]  *** Error codes and diagnostics ***
[2025-06-05 16:51:05]     "exeErrorCode": 0,
[2025-06-05 16:51:05]     "exeErrorDiag": "",
[2025-06-05 16:51:05]     "pilotErrorCode": 0,
[2025-06-05 16:51:05]     "pilotErrorDiag": "",
[2025-06-05 16:51:05]  *** Listing of results directory ***
[2025-06-05 16:51:05] total 417488
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc    495897 May 27 18:39 pilot3.tar.gz
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc      5111 May 27 19:25 queuedata.json
[2025-06-05 16:51:05] -rwx------. 1 boinc boinc     37140 May 27 19:30 runpilot2-wrapper.sh
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc       100 Jun  5 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:51:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 11:46 run_atlas
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc       105 Jun  5 11:46 job.xml
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc      6392 Jun  5 11:46 init_data.xml
[2025-06-05 16:51:05] -rw-r--r--. 2 boinc boinc 222450155 Jun  5 11:46 EVNT.44871834._002789.pool.root.1
[2025-06-05 16:51:05] -rw-r--r--. 2 boinc boinc     15093 Jun  5 11:46 start_atlas.sh
[2025-06-05 16:51:05] drwxrwx--x. 2 boinc boinc        68 Jun  5 11:46 shared
[2025-06-05 16:51:05] -rw-r--r--. 2 boinc boinc    508877 Jun  5 11:46 input.tar.gz
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc         0 Jun  5 11:46 boinc_lockfile
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc      2559 Jun  5 11:46 pandaJob.out
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc    983289 Jun  5 11:46 agis_schedconf.cvmfs.json
[2025-06-05 16:51:05] drwx------. 4 boinc boinc      4096 Jun  5 11:46 pilot3
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc 197396203 Jun  5 16:37 HITS.44871837._070999.pool.root.1
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc       531 Jun  5 16:38 boinc_task_state.xml
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc      1018 Jun  5 16:38 memory_monitor_summary.json
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc   1598969 Jun  5 16:38 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc    411291 Jun  5 16:38 log.44871837._070999.job.log.tgz.1
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc        95 Jun  5 16:39 pilot_heartbeat.json
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc      7687 Jun  5 16:40 heartbeat.json
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc      4611 Jun  5 16:40 pilotlog.txt
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc   1510646 Jun  5 16:40 log.44871837._070999.job.log.1
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc       357 Jun  5 16:40 output.list
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc       620 Jun  5 16:40 runtime_log
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc   1945600 Jun  5 16:40 result.tar.gz
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc       657 Jun  5 16:40 zK1LDmPJDe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBBSKDmqRhhDo.diag
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc      8659 Jun  5 16:40 runtime_log.err
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc      8192 Jun  5 16:51 boinc_mmap_file
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc        28 Jun  5 16:51 wrapper_checkpoint.txt
[2025-06-05 16:51:05] -rw-r--r--. 1 boinc boinc     20449 Jun  5 16:51 stderr.txt
[2025-06-05 16:51:05] HITS file was successfully produced:
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc 197396203 Jun  5 16:37 shared/HITS.pool.root.1
[2025-06-05 16:51:05]  *** Contents of shared directory: ***
[2025-06-05 16:51:05] total 412428
[2025-06-05 16:51:05] -rw-r--r--. 2 boinc boinc 222450155 Jun  5 11:46 ATLAS.root_0
[2025-06-05 16:51:05] -rw-r--r--. 2 boinc boinc     15093 Jun  5 11:46 start_atlas.sh
[2025-06-05 16:51:05] -rw-r--r--. 2 boinc boinc    508877 Jun  5 11:46 input.tar.gz
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc 197396203 Jun  5 16:37 HITS.pool.root.1
[2025-06-05 16:51:05] -rw-------. 1 boinc boinc   1945600 Jun  5 16:40 result.tar.gz
16:51:07 (26848): run_atlas exited; CPU time 65849.420475
16:51:07 (26848): called boinc_finish(0)

</stderr_txt>
]]>

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