Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:51:23 (12074): wrapper (7.7.26015): starting
18:51:23 (12074): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 18:51:23] Arguments: --nthreads 8
[2025-06-05 18:51:23] Threads: 8
[2025-06-05 18:51:23] Checking for CVMFS
[2025-06-05 18:51:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 18:51:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 18:51:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 18:51:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 18:51:25] 2.11.2.0 16647 35077 99352 146826 3 16 21048477 25165825 2745 130560 0 18708524 99.749 22047150 4838 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 18:51:25] CVMFS is ok
[2025-06-05 18:51:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 18:51:25] Checking for apptainer binary...
[2025-06-05 18:51:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 18:51:26] Running /usr/bin/apptainer --version
[2025-06-05 18:51:26] apptainer version 1.3.2-1.el7
[2025-06-05 18:51:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 21:32:35] cg-vwn490.simple-grid.lan
[2025-06-05 21:32:35] apptainer works
[2025-06-05 21:32:35] Set ATHENA_PROC_NUMBER=8
[2025-06-05 21:32:35] Set ATHENA_CORE_NUMBER=8
[2025-06-05 21:32:35] Starting ATLAS job with PandaID=6667923957
[2025-06-05 21:32:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 02:12:10]  *** The last 200 lines of the pilot log: ***
[2025-06-06 02:12:10] 2025-06-06 00:09:12,269 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6667923957/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 02:12:10] 2025-06-06 00:09:12,270 | INFO     | extracted standard info from prmon json
[2025-06-06 02:12:10] 2025-06-06 00:09:12,270 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 02:12:10] 2025-06-06 00:09:12,270 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 02:12:10] 2025-06-06 00:09:12,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 02:12:10] 2025-06-06 00:09:12,271 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 02:12:10] 2025-06-06 00:09:12,276 | INFO     | fitting pss+swap vs Time
[2025-06-06 02:12:10] 2025-06-06 00:09:12,277 | INFO     | sum of square deviations: 6035722470.0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,279 | INFO     | sum of deviations: -24349311196.0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,287 | INFO     | mean x: 1749160225.0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,287 | INFO     | mean y: 2504713.8624535315
[2025-06-06 02:12:10] 2025-06-06 00:09:12,287 | INFO     | -- intersect: 7058966779.817977
[2025-06-06 02:12:10] 2025-06-06 00:09:12,287 | INFO     | intersect: 7058966779.817977
[2025-06-06 02:12:10] 2025-06-06 00:09:12,288 | INFO     | chi2: 2.503380838723757
[2025-06-06 02:12:10] 2025-06-06 00:09:12,288 | INFO     | sum of square deviations: 5705372090.0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,290 | INFO     | sum of deviations: -6172766656.000009
[2025-06-06 02:12:10] 2025-06-06 00:09:12,290 | INFO     | mean x: 1749160072.5
[2025-06-06 02:12:10] 2025-06-06 00:09:12,291 | INFO     | mean y: 2512980.0606060605
[2025-06-06 02:12:10] 2025-06-06 00:09:12,291 | INFO     | -- intersect: 1894967460.0162785
[2025-06-06 02:12:10] 2025-06-06 00:09:12,291 | INFO     | intersect: 1894967460.0162785
[2025-06-06 02:12:10] 2025-06-06 00:09:12,291 | INFO     | chi2: 1.7290201759412898
[2025-06-06 02:12:10] 2025-06-06 00:09:12,291 | INFO     | current chi2=1.7290201759412898 (change=30.93259526493949 %)
[2025-06-06 02:12:10] 2025-06-06 00:09:12,292 | INFO     | sum of square deviations: 5387301010.0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,293 | INFO     | sum of deviations: -6223588805.999991
[2025-06-06 02:12:10] 2025-06-06 00:09:12,294 | INFO     | mean x: 1749159920.0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,294 | INFO     | mean y: 2512955.691119691
[2025-06-06 02:12:10] 2025-06-06 00:09:12,294 | INFO     | -- intersect: 2023200509.219123
[2025-06-06 02:12:10] 2025-06-06 00:09:12,294 | INFO     | intersect: 2023200509.219123
[2025-06-06 02:12:10] 2025-06-06 00:09:12,294 | INFO     | chi2: 1.7284386953239712
[2025-06-06 02:12:10] 2025-06-06 00:09:12,295 | INFO     | current chi2=1.7284386953239712 (change=0.03363064384150352 %)
[2025-06-06 02:12:10] 2025-06-06 00:09:12,295 | INFO     | right removable region: 258
[2025-06-06 02:12:10] 2025-06-06 00:09:12,295 | INFO     | sum of square deviations: 5705372090.0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,297 | INFO     | sum of deviations: -66127233152.5
[2025-06-06 02:12:10] 2025-06-06 00:09:12,297 | INFO     | mean x: 1749160377.5
[2025-06-06 02:12:10] 2025-06-06 00:09:12,297 | INFO     | mean y: 2523842.0265151514
[2025-06-06 02:12:10] 2025-06-06 00:09:12,297 | INFO     | -- intersect: 20275896775.369663
[2025-06-06 02:12:10] 2025-06-06 00:09:12,298 | INFO     | intersect: 20275896775.369663
[2025-06-06 02:12:10] 2025-06-06 00:09:12,298 | INFO     | chi2: 1.036971962334942
[2025-06-06 02:12:10] 2025-06-06 00:09:12,305 | INFO     | current chi2=1.036971962334942 (change=58.577139111458635 %)
[2025-06-06 02:12:10] 2025-06-06 00:09:12,305 | INFO     | sum of square deviations: 5387301010.0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,308 | INFO     | sum of deviations: -65994464304.00001
[2025-06-06 02:12:10] 2025-06-06 00:09:12,308 | INFO     | mean x: 1749160530.0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,308 | INFO     | mean y: 2523754.3243243243
[2025-06-06 02:12:10] 2025-06-06 00:09:12,308 | INFO     | -- intersect: 21429748991.00193
[2025-06-06 02:12:10] 2025-06-06 00:09:12,308 | INFO     | intersect: 21429748991.00193
[2025-06-06 02:12:10] 2025-06-06 00:09:12,309 | INFO     | chi2: 1.0197485213429087
[2025-06-06 02:12:10] 2025-06-06 00:09:12,309 | INFO     | current chi2=1.0197485213429087 (change=1.6609360346880961 %)
[2025-06-06 02:12:10] 2025-06-06 00:09:12,309 | INFO     | left removable region: 20
[2025-06-06 02:12:10] 2025-06-06 00:09:12,309 | INFO     | sum of square deviations: 4180243959.5
[2025-06-06 02:12:10] 2025-06-06 00:09:12,311 | INFO     | sum of deviations: -31307839408.999996
[2025-06-06 02:12:10] 2025-06-06 00:09:12,311 | INFO     | mean x: 1749160499.5
[2025-06-06 02:12:10] 2025-06-06 00:09:12,311 | INFO     | mean y: 2524506.4201680673
[2025-06-06 02:12:10] 2025-06-06 00:09:12,311 | INFO     | -- intersect: 13102821175.579727
[2025-06-06 02:12:10] 2025-06-06 00:09:12,311 | INFO     | intersect: 13102821175.579727
[2025-06-06 02:12:10] 2025-06-06 00:09:12,312 | INFO     | chi2: 0.19267455930717556
[2025-06-06 02:12:10] 2025-06-06 00:09:12,312 | INFO     | -- intersect: 13102821175.579727
[2025-06-06 02:12:10] 2025-06-06 00:09:12,312 | INFO     | current memory leak: -7.49 B/s (using 238 data points, chi2=0.19)
[2025-06-06 02:12:10] 2025-06-06 00:09:12,314 | INFO     | ..............................
[2025-06-06 02:12:10] 2025-06-06 00:09:12,314 | INFO     | . Timing measurements:
[2025-06-06 02:12:10] 2025-06-06 00:09:12,314 | INFO     | . get job = 0 s
[2025-06-06 02:12:10] 2025-06-06 00:09:12,314 | INFO     | . initial setup = 2 s
[2025-06-06 02:12:10] 2025-06-06 00:09:12,314 | INFO     | . payload setup = 19 s
[2025-06-06 02:12:10] 2025-06-06 00:09:12,314 | INFO     | . stage-in = 0 s
[2025-06-06 02:12:10] 2025-06-06 00:09:12,314 | INFO     | . payload execution = 16419 s
[2025-06-06 02:12:10] 2025-06-06 00:09:12,314 | INFO     | . stage-out = 6 s
[2025-06-06 02:12:10] 2025-06-06 00:09:12,314 | INFO     | . log creation = 1 s
[2025-06-06 02:12:10] 2025-06-06 00:09:12,314 | INFO     | ..............................
[2025-06-06 02:12:10] 2025-06-06 00:09:12,445 | INFO     | 
[2025-06-06 02:12:10] 2025-06-06 00:09:12,445 | INFO     | job summary report
[2025-06-06 02:12:10] 2025-06-06 00:09:12,445 | INFO     | --------------------------------------------------
[2025-06-06 02:12:10] 2025-06-06 00:09:12,445 | INFO     | PanDA job id: 6667923957
[2025-06-06 02:12:10] 2025-06-06 00:09:12,445 | INFO     | task id: 44871837
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | errors: (none)
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | pilot state: finished 
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | transexitcode: 0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | exeerrorcode: 0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | exeerrordiag: 
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | exitcode: 0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | exitmsg: OK
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | cpuconsumptiontime: 62637 s
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | nevents: 400
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | neventsw: 0
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | pid: 6707
[2025-06-06 02:12:10] 2025-06-06 00:09:12,446 | INFO     | pgrp: 6707
[2025-06-06 02:12:10] 2025-06-06 00:09:12,447 | INFO     | corecount: 8
[2025-06-06 02:12:10] 2025-06-06 00:09:12,447 | INFO     | event service: False
[2025-06-06 02:12:10] 2025-06-06 00:09:12,447 | INFO     | sizes: {0: 2397218, 1: 2397417, 10: 2397623, 12: 2397651, 16442: 2428541, 16443: 2428540, 16449: 2437665, 16451: 2437721, 16542: 2437891}
[2025-06-06 02:12:10] 2025-06-06 00:09:12,447 | INFO     | --------------------------------------------------
[2025-06-06 02:12:10] 2025-06-06 00:09:12,447 | INFO     | 
[2025-06-06 02:12:10] 2025-06-06 00:09:12,447 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-06 02:12:10] 2025-06-06 00:09:12,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,921 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,921 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 02:12:10] 2025-06-06 00:09:12,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 02:12:10] 2025-06-06 00:09:12,923 | INFO     | job 6667923957 has completed (purged errors)
[2025-06-06 02:12:10] 2025-06-06 00:09:12,923 | INFO     | overall cleanup function is called
[2025-06-06 02:12:10] 2025-06-06 00:09:13,934 | INFO     | --- collectZombieJob: --- 10, [6707]
[2025-06-06 02:12:10] 2025-06-06 00:09:13,935 | INFO     | zombie collector waiting for pid 6707
[2025-06-06 02:12:10] 2025-06-06 00:09:13,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 02:12:10] 2025-06-06 00:09:13,935 | INFO     | collected zombie processes
[2025-06-06 02:12:10] 2025-06-06 00:09:13,935 | INFO     | will attempt to kill all subprocesses of pid=6707
[2025-06-06 02:12:10] 2025-06-06 00:09:14,034 | INFO     | process IDs to be killed: [6707] (in reverse order)
[2025-06-06 02:12:10] 2025-06-06 00:09:14,754 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 02:12:10] 2025-06-06 00:09:14,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 02:12:10] 2025-06-06 00:09:14,758 | INFO     | did not find any defunct processes belonging to 6707
[2025-06-06 02:12:10] 2025-06-06 00:09:14,763 | INFO     | did not find any defunct processes belonging to 6707
[2025-06-06 02:12:10] 2025-06-06 00:09:14,763 | INFO     | ready for new job
[2025-06-06 02:12:10] 2025-06-06 00:09:14,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 02:12:10] 2025-06-06 00:09:14,770 | INFO     | **************************************
[2025-06-06 02:12:10] 2025-06-06 00:09:14,770 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 02:12:10] 2025-06-06 00:09:14,770 | INFO     | **************************************
[2025-06-06 02:12:10] 2025-06-06 00:09:14,770 | INFO     | 
[2025-06-06 02:12:10] 2025-06-06 00:09:14,771 | INFO     | pilot is running in a VM
[2025-06-06 02:12:10] 2025-06-06 00:09:14,774 | INFO     | architecture information:
[2025-06-06 02:12:10] 2025-06-06 00:09:14,788 | INFO     | executing command: cat /etc/os-release
[2025-06-06 02:12:10] 2025-06-06 00:09:14,958 | INFO     | cat /etc/os-release:
[2025-06-06 02:12:10] NAME="CentOS Linux"
[2025-06-06 02:12:10] VERSION="7 (Core)"
[2025-06-06 02:12:10] ID="centos"
[2025-06-06 02:12:10] ID_LIKE="rhel fedora"
[2025-06-06 02:12:10] VERSION_ID="7"
[2025-06-06 02:12:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 02:12:10] ANSI_COLOR="0;31"
[2025-06-06 02:12:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 02:12:10] HOME_URL="https://www.centos.org/"
[2025-06-06 02:12:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 02:12:10] 
[2025-06-06 02:12:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 02:12:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 02:12:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 02:12:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 02:12:10] 
[2025-06-06 02:12:10] 2025-06-06 00:09:14,959 | INFO     | **************************************
[2025-06-06 02:12:10] 2025-06-06 00:09:15,463 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-06 02:12:10] 2025-06-06 00:09:15,763 | INFO     | sufficient remaining disk space (497435017216 B)
[2025-06-06 02:12:10] 2025-06-06 00:09:15,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 02:12:10] 2025-06-06 00:09:15,764 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 02:12:10] 2025-06-06 00:09:15,764 | INFO     | update_server=False
[2025-06-06 02:12:10] 2025-06-06 00:09:15,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 02:12:10] 2025-06-06 00:09:15,765 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 02:12:10] 2025-06-06 00:09:15,857 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 02:12:10] 2025-06-06 00:09:15,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 02:12:10] 2025-06-06 00:09:15,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 02:12:10] 2025-06-06 00:09:16,185 | INFO     | all job control threads have been joined
[2025-06-06 02:12:10] 2025-06-06 00:09:16,362 | INFO     | all data control threads have been joined
[2025-06-06 02:12:10] 2025-06-06 00:09:16,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:12:10] 2025-06-06 00:09:16,446 | INFO     | aborting loop
[2025-06-06 02:12:10] 2025-06-06 00:09:16,771 | INFO     | [job] retrieve thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:16,793 | INFO     | all payload control threads have been joined
[2025-06-06 02:12:10] 2025-06-06 00:09:16,845 | INFO     | [payload] validate_post thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:17,166 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:17,192 | INFO     | [job] control thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:17,368 | INFO     | [data] control thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:17,452 | INFO     | [job] job monitor thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:17,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:12:10] 2025-06-06 00:09:17,504 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:17,698 | INFO     | [payload] failed_post thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:17,732 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:17,772 | INFO     | [data] copytool_out thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:17,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 02:12:10] 2025-06-06 00:09:17,799 | INFO     | [payload] control thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:18,073 | INFO     | [data] copytool_in thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:18,075 | INFO     | [job] validate thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:18,187 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:18,467 | INFO     | [job] queue monitor thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:21,789 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 02:12:10] 2025-06-06 00:09:23,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140210578163520)>', '<ExcThread(monitor, started 140209995896576)>']
[2025-06-06 02:12:10] 2025-06-06 00:09:23,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 02:12:10] 2025-06-06 00:09:23,906 | INFO     | [monitor] control thread has ended
[2025-06-06 02:12:10] 2025-06-06 00:09:28,079 | INFO     | all workflow threads have been joined
[2025-06-06 02:12:10] 2025-06-06 00:09:28,080 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 02:12:10] 2025-06-06 00:09:28,080 | INFO     | traces error code: 0
[2025-06-06 02:12:10] 2025-06-06 00:09:28,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 02:12:10] 2025-06-06 00:09:28,502 [wrapper] ==== pilot stdout END ====
[2025-06-06 02:12:10] 2025-06-06 00:09:28,565 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 02:12:10] 2025-06-06 00:09:28,640 [wrapper] pilotpid: 26566
[2025-06-06 02:12:10] 2025-06-06 00:09:28,711 [wrapper] Pilot exit status: 0
[2025-06-06 02:12:10] 2025-06-06 00:09:29,157 [wrapper] pandaids: 6667923957
[2025-06-06 02:12:10] 2025-06-06 00:09:30,069 [wrapper] cleanup supervisor_pilot 13453 26567
[2025-06-06 02:12:10] 2025-06-06 00:09:30,143 [wrapper] Test setup, not cleaning
[2025-06-06 02:12:10] 2025-06-06 00:09:30,201 [wrapper] apfmon messages muted
[2025-06-06 02:12:10] 2025-06-06 00:09:30,286 [wrapper] ==== wrapper stdout END ====
[2025-06-06 02:12:10] 2025-06-06 00:09:30,376 [wrapper] ==== wrapper stderr END ====
[2025-06-06 02:12:10]  *** Error codes and diagnostics ***
[2025-06-06 02:12:10]     "exeErrorCode": 0,
[2025-06-06 02:12:10]     "exeErrorDiag": "",
[2025-06-06 02:12:10]     "pilotErrorCode": 0,
[2025-06-06 02:12:10]     "pilotErrorDiag": "",
[2025-06-06 02:12:10]  *** Listing of results directory ***
[2025-06-06 02:12:10] total 416036
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc      5111 May 28 05:41 queuedata.json
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc    495897 May 28 05:41 pilot3.tar.gz
[2025-06-06 02:12:10] -rwx------. 1 boinc boinc     37140 May 28 05:43 runpilot2-wrapper.sh
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc       100 Jun  5 18:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 02:12:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 18:51 run_atlas
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc       105 Jun  5 18:51 job.xml
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc      6392 Jun  5 18:51 init_data.xml
[2025-06-06 02:12:10] -rw-r--r--. 2 boinc boinc 222849423 Jun  5 18:51 EVNT.44871834._003055.pool.root.1
[2025-06-06 02:12:10] -rw-r--r--. 2 boinc boinc     15093 Jun  5 18:51 start_atlas.sh
[2025-06-06 02:12:10] drwxrwx--x. 2 boinc boinc        68 Jun  5 18:51 shared
[2025-06-06 02:12:10] -rw-r--r--. 2 boinc boinc    508884 Jun  5 18:51 input.tar.gz
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc         0 Jun  5 18:51 boinc_lockfile
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc      2557 Jun  5 21:32 pandaJob.out
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc    987599 Jun  5 21:33 agis_schedconf.cvmfs.json
[2025-06-06 02:12:10] drwx------. 4 boinc boinc      4096 Jun  5 21:33 pilot3
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc 195715565 Jun  6 02:06 HITS.44871837._078143.pool.root.1
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc       531 Jun  6 02:06 boinc_task_state.xml
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc      1014 Jun  6 02:07 memory_monitor_summary.json
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc   1598969 Jun  6 02:07 agis_ddmendpoints.agis.ALL.json
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc    395288 Jun  6 02:07 log.44871837._078143.job.log.tgz.1
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc        95 Jun  6 02:08 pilot_heartbeat.json
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc      7682 Jun  6 02:09 heartbeat.json
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc      4416 Jun  6 02:09 pilotlog.txt
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc   1422384 Jun  6 02:09 log.44871837._078143.job.log.1
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc       357 Jun  6 02:09 output.list
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc       620 Jun  6 02:09 runtime_log
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc   1832960 Jun  6 02:09 result.tar.gz
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc       657 Jun  6 02:09 V8mNDmssMe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKAbKDm7Kf1Jn.diag
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc      8659 Jun  6 02:09 runtime_log.err
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc      8192 Jun  6 02:12 boinc_mmap_file
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc        28 Jun  6 02:12 wrapper_checkpoint.txt
[2025-06-06 02:12:10] -rw-r--r--. 1 boinc boinc     20498 Jun  6 02:12 stderr.txt
[2025-06-06 02:12:10] HITS file was successfully produced:
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc 195715565 Jun  6 02:06 shared/HITS.pool.root.1
[2025-06-06 02:12:10]  *** Contents of shared directory: ***
[2025-06-06 02:12:10] total 411068
[2025-06-06 02:12:10] -rw-r--r--. 2 boinc boinc 222849423 Jun  5 18:51 ATLAS.root_0
[2025-06-06 02:12:10] -rw-r--r--. 2 boinc boinc     15093 Jun  5 18:51 start_atlas.sh
[2025-06-06 02:12:10] -rw-r--r--. 2 boinc boinc    508884 Jun  5 18:51 input.tar.gz
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc 195715565 Jun  6 02:06 HITS.pool.root.1
[2025-06-06 02:12:10] -rw-------. 1 boinc boinc   1832960 Jun  6 02:09 result.tar.gz
02:12:12 (12074): run_atlas exited; CPU time 62814.112435
02:12:12 (12074): called boinc_finish(0)

</stderr_txt>
]]>

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