Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:39:25 (193690): wrapper (7.7.26015): starting
05:39:25 (193690): wrapper: running run_atlas (--nthreads 9)
[2025-06-05 05:39:25] Arguments: --nthreads 9
[2025-06-05 05:39:25] Threads: 9
[2025-06-05 05:39:25] Checking for CVMFS
[2025-06-05 05:39:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:39:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:39:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:39:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:39:26] 2.11.2.0 6489 30054 262156 146814 1 282 18031154 18432001 9621 130560 1 69796334 99.440 82041115 29513 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 05:39:26] CVMFS is ok
[2025-06-05 05:39:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:39:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:39:26] Further information can be found at the LHC@home message board.
[2025-06-05 05:39:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:39:26] Checking for apptainer binary...
[2025-06-05 05:39:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:39:26] Running /usr/bin/apptainer --version
[2025-06-05 05:39:26] apptainer version 1.3.2-1.el7
[2025-06-05 05:39:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:39:27] c-210-31-2.aglt2.org
[2025-06-05 05:39:27] apptainer works
[2025-06-05 05:39:27] Set ATHENA_PROC_NUMBER=9
[2025-06-05 05:39:27] Set ATHENA_CORE_NUMBER=9
[2025-06-05 05:39:27] Starting ATLAS job with PandaID=6667923927
[2025-06-05 05:39:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:22:53]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:22:53] 2025-06-05 13:22:39,761 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667923927/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:22:53] 2025-06-05 13:22:39,762 | INFO     | extracted standard info from prmon json
[2025-06-05 09:22:53] 2025-06-05 13:22:39,762 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:22:53] 2025-06-05 13:22:39,762 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:22:53] 2025-06-05 13:22:39,762 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:22:53] 2025-06-05 13:22:39,762 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:22:53] 2025-06-05 13:22:39,766 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:22:53] 2025-06-05 13:22:39,767 | INFO     | sum of square deviations: 3168536607.059903
[2025-06-05 09:22:53] 2025-06-05 13:22:39,768 | INFO     | sum of deviations: -10547789817.663593
[2025-06-05 09:22:53] 2025-06-05 13:22:39,768 | INFO     | mean x: 1749123080.253456
[2025-06-05 09:22:53] 2025-06-05 13:22:39,768 | INFO     | mean y: 2537495.884792627
[2025-06-05 09:22:53] 2025-06-05 13:22:39,768 | INFO     | -- intersect: 5825219984.270823
[2025-06-05 09:22:53] 2025-06-05 13:22:39,768 | INFO     | intersect: 5825219984.270823
[2025-06-05 09:22:53] 2025-06-05 13:22:39,768 | INFO     | chi2: 2.4215280051951034
[2025-06-05 09:22:53] 2025-06-05 13:22:39,769 | INFO     | sum of square deviations: 2954540066.731136
[2025-06-05 09:22:53] 2025-06-05 13:22:39,770 | INFO     | sum of deviations: 4294116700.514151
[2025-06-05 09:22:53] 2025-06-05 13:22:39,770 | INFO     | mean x: 1749122927.759434
[2025-06-05 09:22:53] 2025-06-05 13:22:39,770 | INFO     | mean y: 2547877.617924528
[2025-06-05 09:22:53] 2025-06-05 13:22:39,770 | INFO     | -- intersect: -2539620380.6226873
[2025-06-05 09:22:53] 2025-06-05 13:22:39,770 | INFO     | intersect: -2539620380.6226873
[2025-06-05 09:22:53] 2025-06-05 13:22:39,770 | INFO     | chi2: 1.6485383955889914
[2025-06-05 09:22:53] 2025-06-05 13:22:39,770 | INFO     | current chi2=1.6485383955889914 (change=31.92156390294697 %)
[2025-06-05 09:22:53] 2025-06-05 13:22:39,771 | INFO     | sum of square deviations: 2750404176.386457
[2025-06-05 09:22:53] 2025-06-05 13:22:39,772 | INFO     | sum of deviations: 4156386891.410628
[2025-06-05 09:22:53] 2025-06-05 13:22:39,772 | INFO     | mean x: 1749122775.2657006
[2025-06-05 09:22:53] 2025-06-05 13:22:39,772 | INFO     | mean y: 2547774.7198067633
[2025-06-05 09:22:53] 2025-06-05 13:22:39,772 | INFO     | -- intersect: -2640711364.0638123
[2025-06-05 09:22:53] 2025-06-05 13:22:39,772 | INFO     | intersect: -2640711364.0638123
[2025-06-05 09:22:53] 2025-06-05 13:22:39,772 | INFO     | chi2: 1.648819552589891
[2025-06-05 09:22:53] 2025-06-05 13:22:39,772 | INFO     | current chi2=1.648819552589891 (change=-0.01705492584533574 %)
[2025-06-05 09:22:53] 2025-06-05 13:22:39,772 | INFO     | right removable region: 206
[2025-06-05 09:22:53] 2025-06-05 13:22:39,773 | INFO     | sum of square deviations: 2954506516.731136
[2025-06-05 09:22:53] 2025-06-05 13:22:39,774 | INFO     | sum of deviations: -44152154656.10378
[2025-06-05 09:22:53] 2025-06-05 13:22:39,774 | INFO     | mean x: 1749123232.759434
[2025-06-05 09:22:53] 2025-06-05 13:22:39,774 | INFO     | mean y: 2561184.8018867923
[2025-06-05 09:22:53] 2025-06-05 13:22:39,774 | INFO     | -- intersect: 26141464263.216236
[2025-06-05 09:22:53] 2025-06-05 13:22:39,774 | INFO     | intersect: 26141464263.216236
[2025-06-05 09:22:53] 2025-06-05 13:22:39,775 | INFO     | chi2: 0.9501404306154704
[2025-06-05 09:22:53] 2025-06-05 13:22:39,775 | INFO     | current chi2=0.9501404306154704 (change=60.76277339857082 %)
[2025-06-05 09:22:53] 2025-06-05 13:22:39,775 | INFO     | sum of square deviations: 2750349763.913057
[2025-06-05 09:22:53] 2025-06-05 13:22:39,776 | INFO     | sum of deviations: -41334642607.86955
[2025-06-05 09:22:53] 2025-06-05 13:22:39,776 | INFO     | mean x: 1749123385.2608695
[2025-06-05 09:22:53] 2025-06-05 13:22:39,776 | INFO     | mean y: 2559043.7198067633
[2025-06-05 09:22:53] 2025-06-05 13:22:39,776 | INFO     | -- intersect: 26289902913.74494
[2025-06-05 09:22:53] 2025-06-05 13:22:39,776 | INFO     | intersect: 26289902913.74494
[2025-06-05 09:22:53] 2025-06-05 13:22:39,777 | INFO     | chi2: 0.9387925366040437
[2025-06-05 09:22:53] 2025-06-05 13:22:39,777 | INFO     | current chi2=0.9387925366040437 (change=1.1943386099332562 %)
[2025-06-05 09:22:53] 2025-06-05 13:22:39,777 | INFO     | left removable region: 20
[2025-06-05 09:22:53] 2025-06-05 13:22:39,777 | INFO     | sum of square deviations: 1995354195.3978465
[2025-06-05 09:22:53] 2025-06-05 13:22:39,778 | INFO     | sum of deviations: -13115375118.376356
[2025-06-05 09:22:53] 2025-06-05 13:22:39,778 | INFO     | mean x: 1749123354.7849462
[2025-06-05 09:22:53] 2025-06-05 13:22:39,778 | INFO     | mean y: 2559604.365591398
[2025-06-05 09:22:53] 2025-06-05 13:22:39,778 | INFO     | -- intersect: 11499470267.759594
[2025-06-05 09:22:53] 2025-06-05 13:22:39,778 | INFO     | intersect: 11499470267.759594
[2025-06-05 09:22:53] 2025-06-05 13:22:39,779 | INFO     | chi2: 0.10137790620967624
[2025-06-05 09:22:53] 2025-06-05 13:22:39,779 | INFO     | -- intersect: 11499470267.759594
[2025-06-05 09:22:53] 2025-06-05 13:22:39,779 | INFO     | current memory leak: -6.57 B/s (using 186 data points, chi2=0.10)
[2025-06-05 09:22:53] 2025-06-05 13:22:39,779 | INFO     | ..............................
[2025-06-05 09:22:53] 2025-06-05 13:22:39,779 | INFO     | . Timing measurements:
[2025-06-05 09:22:53] 2025-06-05 13:22:39,779 | INFO     | . get job = 0 s
[2025-06-05 09:22:53] 2025-06-05 13:22:39,780 | INFO     | . initial setup = 3 s
[2025-06-05 09:22:53] 2025-06-05 13:22:39,780 | INFO     | . payload setup = 17 s
[2025-06-05 09:22:53] 2025-06-05 13:22:39,780 | INFO     | . stage-in = 0 s
[2025-06-05 09:22:53] 2025-06-05 13:22:39,780 | INFO     | . payload execution = 13235 s
[2025-06-05 09:22:53] 2025-06-05 13:22:39,780 | INFO     | . stage-out = 3 s
[2025-06-05 09:22:53] 2025-06-05 13:22:39,780 | INFO     | . log creation = 1 s
[2025-06-05 09:22:53] 2025-06-05 13:22:39,780 | INFO     | ..............................
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | 
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | job summary report
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | --------------------------------------------------
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | PanDA job id: 6667923927
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | task id: 44871837
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | errors: (none)
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | pilot state: finished 
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | transexitcode: 0
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | exeerrorcode: 0
[2025-06-05 09:22:53] 2025-06-05 13:22:39,892 | INFO     | exeerrordiag: 
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | exitcode: 0
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | exitmsg: OK
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | cpuconsumptiontime: 52444 s
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | nevents: 400
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | neventsw: 0
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | pid: 212459
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | pgrp: 212459
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | corecount: 9
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | event service: False
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | sizes: {0: 2397391, 1: 2397391, 11: 2397419, 14: 2397653, 22: 2397681, 13256: 2427787, 13261: 2436728, 13264: 2436784, 13314: 2436954}
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | --------------------------------------------------
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | 
[2025-06-05 09:22:53] 2025-06-05 13:22:39,893 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 09:22:53] 2025-06-05 13:22:40,048 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,049 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,049 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,049 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:22:53] 2025-06-05 13:22:40,054 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:22:53] 2025-06-05 13:22:40,054 | INFO     | job 6667923927 has completed (purged errors)
[2025-06-05 09:22:53] 2025-06-05 13:22:40,054 | INFO     | overall cleanup function is called
[2025-06-05 09:22:53] 2025-06-05 13:22:41,077 | INFO     | --- collectZombieJob: --- 10, [212459]
[2025-06-05 09:22:53] 2025-06-05 13:22:41,077 | INFO     | zombie collector waiting for pid 212459
[2025-06-05 09:22:53] 2025-06-05 13:22:41,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:22:53] 2025-06-05 13:22:41,077 | INFO     | collected zombie processes
[2025-06-05 09:22:53] 2025-06-05 13:22:41,077 | INFO     | will attempt to kill all subprocesses of pid=212459
[2025-06-05 09:22:53] 2025-06-05 13:22:41,282 | INFO     | process IDs to be killed: [212459] (in reverse order)
[2025-06-05 09:22:53] 2025-06-05 13:22:41,433 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:22:53] 2025-06-05 13:22:41,434 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:22:53] 2025-06-05 13:22:41,440 | INFO     | did not find any defunct processes belonging to 212459
[2025-06-05 09:22:53] 2025-06-05 13:22:41,445 | INFO     | did not find any defunct processes belonging to 212459
[2025-06-05 09:22:53] 2025-06-05 13:22:41,445 | INFO     | ready for new job
[2025-06-05 09:22:53] 2025-06-05 13:22:41,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:22:53] 2025-06-05 13:22:41,447 | INFO     | **************************************
[2025-06-05 09:22:53] 2025-06-05 13:22:41,447 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:22:53] 2025-06-05 13:22:41,448 | INFO     | **************************************
[2025-06-05 09:22:53] 2025-06-05 13:22:41,448 | INFO     | 
[2025-06-05 09:22:53] 2025-06-05 13:22:41,451 | INFO     | architecture information:
[2025-06-05 09:22:53] 2025-06-05 13:22:41,451 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:22:53] 2025-06-05 13:22:41,487 | INFO     | cat /etc/os-release:
[2025-06-05 09:22:53] NAME="CentOS Linux"
[2025-06-05 09:22:53] VERSION="7 (Core)"
[2025-06-05 09:22:53] ID="centos"
[2025-06-05 09:22:53] ID_LIKE="rhel fedora"
[2025-06-05 09:22:53] VERSION_ID="7"
[2025-06-05 09:22:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:22:53] ANSI_COLOR="0;31"
[2025-06-05 09:22:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:22:53] HOME_URL="https://www.centos.org/"
[2025-06-05 09:22:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:22:53] 
[2025-06-05 09:22:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:22:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:22:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:22:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:22:53] 
[2025-06-05 09:22:53] 2025-06-05 13:22:41,488 | INFO     | **************************************
[2025-06-05 09:22:53] 2025-06-05 13:22:41,991 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 09:22:53] 2025-06-05 13:22:42,010 | INFO     | sufficient remaining disk space (57061408768 B)
[2025-06-05 09:22:53] 2025-06-05 13:22:42,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:22:53] 2025-06-05 13:22:42,010 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:22:53] 2025-06-05 13:22:42,010 | INFO     | update_server=False
[2025-06-05 09:22:53] 2025-06-05 13:22:42,010 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:22:53] 2025-06-05 13:22:42,011 | INFO     | all data control threads have been joined
[2025-06-05 09:22:53] 2025-06-05 13:22:42,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:22:53] 2025-06-05 13:22:42,011 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 09:22:53] 2025-06-05 13:22:42,011 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:22:53] 2025-06-05 13:22:42,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:22:53] 2025-06-05 13:22:42,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:22:53] 2025-06-05 13:22:42,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:22:53] 2025-06-05 13:22:42,012 | INFO     | aborting loop
[2025-06-05 09:22:53] 2025-06-05 13:22:42,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:22:53] 2025-06-05 13:22:42,899 | INFO     | all payload control threads have been joined
[2025-06-05 09:22:53] 2025-06-05 13:22:43,013 | INFO     | all job control threads have been joined
[2025-06-05 09:22:53] 2025-06-05 13:22:43,019 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:43,019 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:43,020 | INFO     | [data] control thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:43,190 | INFO     | [job] validate thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:43,229 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:43,331 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:43,428 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:43,436 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:43,456 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:43,900 | INFO     | [payload] control thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:44,019 | INFO     | [job] control thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:44,202 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:44,364 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:44,887 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:44,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:22:53] 2025-06-05 13:22:45,906 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:46,017 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:22:53] 2025-06-05 13:22:46,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573938636608)>', '<ExcThread(monitor, started 140573180675840)>']
[2025-06-05 09:22:53] 2025-06-05 13:22:47,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:22:53] 2025-06-05 13:22:47,037 | INFO     | [monitor] control thread has ended
[2025-06-05 09:22:53] 2025-06-05 13:22:51,203 | INFO     | all workflow threads have been joined
[2025-06-05 09:22:53] 2025-06-05 13:22:51,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:22:53] 2025-06-05 13:22:51,203 | INFO     | traces error code: 0
[2025-06-05 09:22:53] 2025-06-05 13:22:51,203 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:22:53] 2025-06-05 13:22:51,637 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:22:53] 2025-06-05 13:22:51,678 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:22:53] 2025-06-05 13:22:51,719 [wrapper] pilotpid: 197630
[2025-06-05 09:22:53] 2025-06-05 13:22:51,760 [wrapper] Pilot exit status: 0
[2025-06-05 09:22:53] 2025-06-05 13:22:51,944 [wrapper] pandaids: 6667923927
[2025-06-05 09:22:53] 2025-06-05 13:22:52,558 [wrapper] cleanup supervisor_pilot 227053 197631
[2025-06-05 09:22:53] 2025-06-05 13:22:52,588 [wrapper] Test setup, not cleaning
[2025-06-05 09:22:53] 2025-06-05 13:22:52,591 [wrapper] apfmon messages muted
[2025-06-05 09:22:53] 2025-06-05 13:22:52,594 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:22:53] 2025-06-05 13:22:52,597 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:22:53]  *** Error codes and diagnostics ***
[2025-06-05 09:22:53]     "exeErrorCode": 0,
[2025-06-05 09:22:53]     "exeErrorDiag": "",
[2025-06-05 09:22:53]     "pilotErrorCode": 0,
[2025-06-05 09:22:53]     "pilotErrorDiag": "",
[2025-06-05 09:22:53]  *** Listing of results directory ***
[2025-06-05 09:22:53] total 417204
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas    495897 May 27 22:39 pilot3.tar.gz
[2025-06-05 09:22:53] -rwx------ 1 boincer umatlas     37140 May 27 23:27 runpilot2-wrapper.sh
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas      5111 May 27 23:27 queuedata.json
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas       100 Jun  5 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:22:53] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 05:39 run_atlas
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas       105 Jun  5 05:39 job.xml
[2025-06-05 09:22:53] -rw-r--r-- 2 boincer umatlas 224060181 Jun  5 05:39 EVNT.44871834._003053.pool.root.1
[2025-06-05 09:22:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 05:39 start_atlas.sh
[2025-06-05 09:22:53] drwxrwx--x 2 boincer umatlas      4096 Jun  5 05:39 shared
[2025-06-05 09:22:53] -rw-r--r-- 2 boincer umatlas    508878 Jun  5 05:39 input.tar.gz
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas         0 Jun  5 05:39 boinc_lockfile
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 05:39 pandaJob.out
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas    983289 Jun  5 05:40 agis_schedconf.cvmfs.json
[2025-06-05 09:22:53] drwx------ 4 boincer umatlas      4096 Jun  5 05:40 pilot3
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas      6356 Jun  5 09:19 init_data.xml
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas 196131882 Jun  5 09:20 HITS.44871837._078113.pool.root.1
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas       531 Jun  5 09:20 boinc_task_state.xml
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas      1061 Jun  5 09:21 memory_monitor_summary.json
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas   1598969 Jun  5 09:21 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas    414501 Jun  5 09:21 log.44871837._078113.job.log.tgz.1
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas        95 Jun  5 09:22 pilot_heartbeat.json
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas      7757 Jun  5 09:22 heartbeat.json
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 09:22 boinc_mmap_file
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas        28 Jun  5 09:22 wrapper_checkpoint.txt
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas      4476 Jun  5 09:22 pilotlog.txt
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas   1182317 Jun  5 09:22 log.44871837._078113.job.log.1
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas       357 Jun  5 09:22 output.list
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas       620 Jun  5 09:22 runtime_log
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas   1617920 Jun  5 09:22 result.tar.gz
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas      8670 Jun  5 09:22 runtime_log.err
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas       664 Jun  5 09:22 5OBNDmvcMe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhrSKDmTL1Mbn.diag
[2025-06-05 09:22:53] -rw-r--r-- 1 boincer umatlas     20951 Jun  5 09:22 stderr.txt
[2025-06-05 09:22:53] HITS file was successfully produced:
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas 196131882 Jun  5 09:20 shared/HITS.pool.root.1
[2025-06-05 09:22:53]  *** Contents of shared directory: ***
[2025-06-05 09:22:53] total 412448
[2025-06-05 09:22:53] -rw-r--r-- 2 boincer umatlas 224060181 Jun  5 05:39 ATLAS.root_0
[2025-06-05 09:22:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 05:39 start_atlas.sh
[2025-06-05 09:22:53] -rw-r--r-- 2 boincer umatlas    508878 Jun  5 05:39 input.tar.gz
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas 196131882 Jun  5 09:20 HITS.pool.root.1
[2025-06-05 09:22:53] -rw------- 1 boincer umatlas   1617920 Jun  5 09:22 result.tar.gz
09:22:54 (193690): run_atlas exited; CPU time 52631.300214
09:22:54 (193690): called boinc_finish(0)

</stderr_txt>
]]>

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