Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:10:46 (126895): wrapper (7.7.26015): starting
05:10:46 (126895): wrapper: running run_atlas (--nthreads 9)
[2025-06-05 05:10:46] Arguments: --nthreads 9
[2025-06-05 05:10:46] Threads: 9
[2025-06-05 05:10:46] Checking for CVMFS
[2025-06-05 05:10:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:10:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:10:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:10:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:10:50] 2.11.2.0 5225 30026 266660 146812 3 518 14154522 18432001 12921 130560 0 60429139 99.432 71353466 29634 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 05:10:50] CVMFS is ok
[2025-06-05 05:10:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:10:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:10:50] Further information can be found at the LHC@home message board.
[2025-06-05 05:10:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:10:50] Checking for apptainer binary...
[2025-06-05 05:10:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:10:50] Running /usr/bin/apptainer --version
[2025-06-05 05:10:50] apptainer version 1.3.2-1.el7
[2025-06-05 05:10:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:11:11] c-210-33-2.aglt2.org
[2025-06-05 05:11:11] apptainer works
[2025-06-05 05:11:11] Set ATHENA_PROC_NUMBER=9
[2025-06-05 05:11:11] Set ATHENA_CORE_NUMBER=9
[2025-06-05 05:11:11] Starting ATLAS job with PandaID=6669133589
[2025-06-05 05:11:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:44:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:44:06] 2025-06-05 12:43:51,608 | INFO     | mean y: 2436095.6649484537
[2025-06-05 08:44:06] 2025-06-05 12:43:51,608 | INFO     | -- intersect: -111874024409.41441
[2025-06-05 08:44:06] 2025-06-05 12:43:51,608 | INFO     | intersect: -111874024409.41441
[2025-06-05 08:44:06] 2025-06-05 12:43:51,608 | INFO     | chi2: 12.012608273534617
[2025-06-05 08:44:06] 2025-06-05 12:43:51,608 | INFO     | current chi2=12.012608273534617 (change=-0.3012123504740558 %)
[2025-06-05 08:44:06] 2025-06-05 12:43:51,609 | INFO     | right removable region: 193
[2025-06-05 08:44:06] 2025-06-05 12:43:51,609 | INFO     | sum of square deviations: 2263976805.2783384
[2025-06-05 08:44:06] 2025-06-05 12:43:51,610 | INFO     | sum of deviations: 76302213468.05153
[2025-06-05 08:44:06] 2025-06-05 12:43:51,610 | INFO     | mean x: 1749121475.628866
[2025-06-05 08:44:06] 2025-06-05 12:43:51,610 | INFO     | mean y: 2500527.097938144
[2025-06-05 08:44:06] 2025-06-05 12:43:51,610 | INFO     | -- intersect: -58947679485.271454
[2025-06-05 08:44:06] 2025-06-05 12:43:51,610 | INFO     | intersect: -58947679485.271454
[2025-06-05 08:44:06] 2025-06-05 12:43:51,610 | INFO     | chi2: 5.896692817645563
[2025-06-05 08:44:06] 2025-06-05 12:43:51,610 | INFO     | current chi2=5.896692817645563 (change=50.764611231749214 %)
[2025-06-05 08:44:06] 2025-06-05 12:43:51,611 | INFO     | sum of square deviations: 2093389237.6931143
[2025-06-05 08:44:06] 2025-06-05 12:43:51,612 | INFO     | sum of deviations: 15684838827.238094
[2025-06-05 08:44:06] 2025-06-05 12:43:51,612 | INFO     | mean x: 1749121628.132275
[2025-06-05 08:44:06] 2025-06-05 12:43:51,612 | INFO     | mean y: 2554694.1904761903
[2025-06-05 08:44:06] 2025-06-05 12:43:51,612 | INFO     | -- intersect: -13102839339.803732
[2025-06-05 08:44:06] 2025-06-05 12:43:51,612 | INFO     | intersect: -13102839339.803732
[2025-06-05 08:44:06] 2025-06-05 12:43:51,612 | INFO     | chi2: 2.022670621146668
[2025-06-05 08:44:06] 2025-06-05 12:43:51,612 | INFO     | current chi2=2.022670621146668 (change=65.69821960041862 %)
[2025-06-05 08:44:06] 2025-06-05 12:43:51,612 | INFO     | sum of square deviations: 1931603938.869566
[2025-06-05 08:44:06] 2025-06-05 12:43:51,613 | INFO     | sum of deviations: -23119661968.717396
[2025-06-05 08:44:06] 2025-06-05 12:43:51,613 | INFO     | mean x: 1749121780.6304348
[2025-06-05 08:44:06] 2025-06-05 12:43:51,613 | INFO     | mean y: 2591117.592391304
[2025-06-05 08:44:06] 2025-06-05 12:43:51,614 | INFO     | -- intersect: 20938096319.53504
[2025-06-05 08:44:06] 2025-06-05 12:43:51,614 | INFO     | intersect: 20938096319.53504
[2025-06-05 08:44:06] 2025-06-05 12:43:51,614 | INFO     | chi2: 0.3606147626168673
[2025-06-05 08:44:06] 2025-06-05 12:43:51,614 | INFO     | current chi2=0.3606147626168673 (change=82.17135509624242 %)
[2025-06-05 08:44:06] 2025-06-05 12:43:51,614 | INFO     | sum of square deviations: 1778365838.782126
[2025-06-05 08:44:06] 2025-06-05 12:43:51,615 | INFO     | sum of deviations: -34537147943.32963
[2025-06-05 08:44:06] 2025-06-05 12:43:51,615 | INFO     | mean x: 1749121933.1340783
[2025-06-05 08:44:06] 2025-06-05 12:43:51,615 | INFO     | mean y: 2602406.972067039
[2025-06-05 08:44:06] 2025-06-05 12:43:51,615 | INFO     | -- intersect: 33971812598.810097
[2025-06-05 08:44:06] 2025-06-05 12:43:51,615 | INFO     | intersect: 33971812598.810097
[2025-06-05 08:44:06] 2025-06-05 12:43:51,616 | INFO     | chi2: 0.1605931099878229
[2025-06-05 08:44:06] 2025-06-05 12:43:51,616 | INFO     | current chi2=0.1605931099878229 (change=55.46685087919045 %)
[2025-06-05 08:44:06] 2025-06-05 12:43:51,616 | INFO     | sum of square deviations: 1633453476.1896548
[2025-06-05 08:44:06] 2025-06-05 12:43:51,617 | INFO     | sum of deviations: -30460695713.603436
[2025-06-05 08:44:06] 2025-06-05 12:43:51,617 | INFO     | mean x: 1749122085.637931
[2025-06-05 08:44:06] 2025-06-05 12:43:51,617 | INFO     | mean y: 2598105.879310345
[2025-06-05 08:44:06] 2025-06-05 12:43:51,617 | INFO     | -- intersect: 32620285963.659676
[2025-06-05 08:44:06] 2025-06-05 12:43:51,617 | INFO     | intersect: 32620285963.659676
[2025-06-05 08:44:06] 2025-06-05 12:43:51,617 | INFO     | chi2: 0.1586897992330127
[2025-06-05 08:44:06] 2025-06-05 12:43:51,617 | INFO     | current chi2=0.1586897992330127 (change=1.1851758490476323 %)
[2025-06-05 08:44:06] 2025-06-05 12:43:51,617 | INFO     | left removable region: 50
[2025-06-05 08:44:06] 2025-06-05 12:43:51,618 | INFO     | sum of square deviations: 906694135.2027968
[2025-06-05 08:44:06] 2025-06-05 12:43:51,618 | INFO     | sum of deviations: -358584151.9440565
[2025-06-05 08:44:06] 2025-06-05 12:43:51,618 | INFO     | mean x: 1749122665.1398602
[2025-06-05 08:44:06] 2025-06-05 12:43:51,618 | INFO     | mean y: 2559814.797202797
[2025-06-05 08:44:06] 2025-06-05 12:43:51,618 | INFO     | -- intersect: 694312020.0599176
[2025-06-05 08:44:06] 2025-06-05 12:43:51,618 | INFO     | intersect: 694312020.0599176
[2025-06-05 08:44:06] 2025-06-05 12:43:51,619 | INFO     | chi2: 0.025073150347254804
[2025-06-05 08:44:06] 2025-06-05 12:43:51,619 | INFO     | -- intersect: 694312020.0599176
[2025-06-05 08:44:06] 2025-06-05 12:43:51,619 | INFO     | current memory leak: -0.40 B/s (using 143 data points, chi2=0.03)
[2025-06-05 08:44:06] 2025-06-05 12:43:51,619 | INFO     | ..............................
[2025-06-05 08:44:06] 2025-06-05 12:43:51,620 | INFO     | . Timing measurements:
[2025-06-05 08:44:06] 2025-06-05 12:43:51,620 | INFO     | . get job = 1 s
[2025-06-05 08:44:06] 2025-06-05 12:43:51,620 | INFO     | . initial setup = 13 s
[2025-06-05 08:44:06] 2025-06-05 12:43:51,620 | INFO     | . payload setup = 186 s
[2025-06-05 08:44:06] 2025-06-05 12:43:51,620 | INFO     | . stage-in = 0 s
[2025-06-05 08:44:06] 2025-06-05 12:43:51,620 | INFO     | . payload execution = 12253 s
[2025-06-05 08:44:06] 2025-06-05 12:43:51,620 | INFO     | . stage-out = 2 s
[2025-06-05 08:44:06] 2025-06-05 12:43:51,620 | INFO     | . log creation = 0 s
[2025-06-05 08:44:06] 2025-06-05 12:43:51,620 | INFO     | ..............................
[2025-06-05 08:44:06] 2025-06-05 12:43:51,703 | INFO     | 
[2025-06-05 08:44:06] 2025-06-05 12:43:51,704 | INFO     | job summary report
[2025-06-05 08:44:06] 2025-06-05 12:43:51,704 | INFO     | --------------------------------------------------
[2025-06-05 08:44:06] 2025-06-05 12:43:51,704 | INFO     | PanDA job id: 6669133589
[2025-06-05 08:44:06] 2025-06-05 12:43:51,704 | INFO     | task id: 44871837
[2025-06-05 08:44:06] 2025-06-05 12:43:51,705 | INFO     | errors: (none)
[2025-06-05 08:44:06] 2025-06-05 12:43:51,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:44:06] 2025-06-05 12:43:51,705 | INFO     | pilot state: finished 
[2025-06-05 08:44:06] 2025-06-05 12:43:51,705 | INFO     | transexitcode: 0
[2025-06-05 08:44:06] 2025-06-05 12:43:51,705 | INFO     | exeerrorcode: 0
[2025-06-05 08:44:06] 2025-06-05 12:43:51,706 | INFO     | exeerrordiag: 
[2025-06-05 08:44:06] 2025-06-05 12:43:51,706 | INFO     | exitcode: 0
[2025-06-05 08:44:06] 2025-06-05 12:43:51,706 | INFO     | exitmsg: OK
[2025-06-05 08:44:06] 2025-06-05 12:43:51,706 | INFO     | cpuconsumptiontime: 51809 s
[2025-06-05 08:44:06] 2025-06-05 12:43:51,706 | INFO     | nevents: 400
[2025-06-05 08:44:06] 2025-06-05 12:43:51,707 | INFO     | neventsw: 0
[2025-06-05 08:44:06] 2025-06-05 12:43:51,707 | INFO     | pid: 146929
[2025-06-05 08:44:06] 2025-06-05 12:43:51,707 | INFO     | pgrp: 146929
[2025-06-05 08:44:06] 2025-06-05 12:43:51,707 | INFO     | corecount: 9
[2025-06-05 08:44:06] 2025-06-05 12:43:51,707 | INFO     | event service: False
[2025-06-05 08:44:06] 2025-06-05 12:43:51,707 | INFO     | sizes: {0: 2396564, 1: 2397249, 2: 2397448, 13: 2397448, 25: 2397504, 36: 2397532, 48: 2397688, 60: 2397716, 64: 2397950, 72: 2398006, 12444: 2427860, 12446: 24368
[2025-06-05 08:44:06] 2025-06-05 12:43:51,707 | INFO     | --------------------------------------------------
[2025-06-05 08:44:06] 2025-06-05 12:43:51,708 | INFO     | 
[2025-06-05 08:44:06] 2025-06-05 12:43:51,708 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-05 08:44:06] 2025-06-05 12:43:51,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,732 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,732 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,732 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,732 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | job 6669133589 has completed (purged errors)
[2025-06-05 08:44:06] 2025-06-05 12:43:51,733 | INFO     | overall cleanup function is called
[2025-06-05 08:44:06] 2025-06-05 12:43:52,741 | INFO     | --- collectZombieJob: --- 10, [146929]
[2025-06-05 08:44:06] 2025-06-05 12:43:52,742 | INFO     | zombie collector waiting for pid 146929
[2025-06-05 08:44:06] 2025-06-05 12:43:52,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:44:06] 2025-06-05 12:43:52,742 | INFO     | collected zombie processes
[2025-06-05 08:44:06] 2025-06-05 12:43:52,742 | INFO     | will attempt to kill all subprocesses of pid=146929
[2025-06-05 08:44:06] 2025-06-05 12:43:52,916 | INFO     | process IDs to be killed: [146929] (in reverse order)
[2025-06-05 08:44:06] 2025-06-05 12:43:52,983 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:44:06] 2025-06-05 12:43:52,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:44:06] 2025-06-05 12:43:52,989 | INFO     | did not find any defunct processes belonging to 146929
[2025-06-05 08:44:06] 2025-06-05 12:43:52,994 | INFO     | did not find any defunct processes belonging to 146929
[2025-06-05 08:44:06] 2025-06-05 12:43:52,995 | INFO     | ready for new job
[2025-06-05 08:44:06] 2025-06-05 12:43:52,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:44:06] 2025-06-05 12:43:52,996 | INFO     | **************************************
[2025-06-05 08:44:06] 2025-06-05 12:43:52,996 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:44:06] 2025-06-05 12:43:52,997 | INFO     | **************************************
[2025-06-05 08:44:06] 2025-06-05 12:43:52,997 | INFO     | 
[2025-06-05 08:44:06] 2025-06-05 12:43:53,000 | INFO     | architecture information:
[2025-06-05 08:44:06] 2025-06-05 12:43:53,000 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:44:06] 2025-06-05 12:43:53,035 | INFO     | cat /etc/os-release:
[2025-06-05 08:44:06] NAME="CentOS Linux"
[2025-06-05 08:44:06] VERSION="7 (Core)"
[2025-06-05 08:44:06] ID="centos"
[2025-06-05 08:44:06] ID_LIKE="rhel fedora"
[2025-06-05 08:44:06] VERSION_ID="7"
[2025-06-05 08:44:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:44:06] ANSI_COLOR="0;31"
[2025-06-05 08:44:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:44:06] HOME_URL="https://www.centos.org/"
[2025-06-05 08:44:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:44:06] 
[2025-06-05 08:44:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:44:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:44:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:44:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:44:06] 
[2025-06-05 08:44:06] 2025-06-05 12:43:53,035 | INFO     | **************************************
[2025-06-05 08:44:06] 2025-06-05 12:43:53,538 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-05 08:44:06] 2025-06-05 12:43:53,675 | INFO     | sufficient remaining disk space (57907609600 B)
[2025-06-05 08:44:06] 2025-06-05 12:43:53,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:44:06] 2025-06-05 12:43:53,676 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:44:06] 2025-06-05 12:43:53,676 | INFO     | update_server=False
[2025-06-05 08:44:06] 2025-06-05 12:43:53,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:44:06] 2025-06-05 12:43:53,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:44:06] 2025-06-05 12:43:53,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:44:06] 2025-06-05 12:43:53,726 | INFO     | all job control threads have been joined
[2025-06-05 08:44:06] 2025-06-05 12:43:53,783 | INFO     | all data control threads have been joined
[2025-06-05 08:44:06] 2025-06-05 12:43:53,841 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 08:44:06] 2025-06-05 12:43:53,841 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 08:44:06] 2025-06-05 12:43:53,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:44:06] 2025-06-05 12:43:53,842 | INFO     | will abort loop
[2025-06-05 08:44:06] 2025-06-05 12:43:53,895 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:44:06] 2025-06-05 12:43:53,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:44:06] 2025-06-05 12:43:53,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:44:06] 2025-06-05 12:43:54,681 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:54,682 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:54,732 | INFO     | [job] control thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:54,789 | INFO     | [data] control thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:54,802 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:54,846 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:54,923 | INFO     | all payload control threads have been joined
[2025-06-05 08:44:06] 2025-06-05 12:43:54,965 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:55,139 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:55,156 | INFO     | [job] validate thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:55,280 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:55,547 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:55,570 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:44:06] 2025-06-05 12:43:55,682 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:55,928 | INFO     | [payload] control thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:55,962 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:56,011 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:43:59,572 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:44:06] 2025-06-05 12:44:00,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243548067648)>', '<ExcThread(monitor, started 140243030243072)>']
[2025-06-05 08:44:06] 2025-06-05 12:44:00,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:44:06] 2025-06-05 12:44:00,932 | INFO     | [monitor] control thread has ended
[2025-06-05 08:44:06] 2025-06-05 12:44:05,349 | INFO     | all workflow threads have been joined
[2025-06-05 08:44:06] 2025-06-05 12:44:05,349 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:44:06] 2025-06-05 12:44:05,350 | INFO     | traces error code: 0
[2025-06-05 08:44:06] 2025-06-05 12:44:05,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:44:06] 2025-06-05 12:44:05,653 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:44:06] 2025-06-05 12:44:05,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:44:06] 2025-06-05 12:44:05,660 [wrapper] pilotpid: 133911
[2025-06-05 08:44:06] 2025-06-05 12:44:05,667 [wrapper] Pilot exit status: 0
[2025-06-05 08:44:06] 2025-06-05 12:44:05,694 [wrapper] pandaids: 6669133589
[2025-06-05 08:44:06] 2025-06-05 12:44:05,737 [wrapper] cleanup supervisor_pilot 174293 133912
[2025-06-05 08:44:06] 2025-06-05 12:44:05,741 [wrapper] Test setup, not cleaning
[2025-06-05 08:44:06] 2025-06-05 12:44:05,744 [wrapper] apfmon messages muted
[2025-06-05 08:44:06] 2025-06-05 12:44:05,747 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:44:06] 2025-06-05 12:44:05,749 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:44:06]  *** Error codes and diagnostics ***
[2025-06-05 08:44:06]     "exeErrorCode": 0,
[2025-06-05 08:44:06]     "exeErrorDiag": "",
[2025-06-05 08:44:06]     "pilotErrorCode": 0,
[2025-06-05 08:44:06]     "pilotErrorDiag": "",
[2025-06-05 08:44:06]  *** Listing of results directory ***
[2025-06-05 08:44:06] total 413736
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas    495897 May 28 22:05 pilot3.tar.gz
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas      5111 May 28 22:23 queuedata.json
[2025-06-05 08:44:06] -rwx------ 1 boincer umatlas     37140 May 28 22:24 runpilot2-wrapper.sh
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas       100 Jun  5 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:44:06] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 05:10 run_atlas
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas       105 Jun  5 05:10 job.xml
[2025-06-05 08:44:06] -rw-r--r-- 2 boincer umatlas 221570752 Jun  5 05:10 EVNT.44871834._003638.pool.root.1
[2025-06-05 08:44:06] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 05:10 start_atlas.sh
[2025-06-05 08:44:06] drwxrwx--x 2 boincer umatlas      4096 Jun  5 05:10 shared
[2025-06-05 08:44:06] -rw-r--r-- 2 boincer umatlas    508876 Jun  5 05:10 input.tar.gz
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas         0 Jun  5 05:10 boinc_lockfile
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 05:11 pandaJob.out
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas    983281 Jun  5 05:13 agis_schedconf.cvmfs.json
[2025-06-05 08:44:06] drwx------ 4 boincer umatlas      4096 Jun  5 05:14 pilot3
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas      6270 Jun  5 08:38 init_data.xml
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas 195213518 Jun  5 08:43 HITS.44871837._093601.pool.root.1
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas        95 Jun  5 08:43 pilot_heartbeat.json
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas       531 Jun  5 08:43 boinc_task_state.xml
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas      1061 Jun  5 08:43 memory_monitor_summary.json
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas   1598969 Jun  5 08:43 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas    396408 Jun  5 08:43 log.44871837._093601.job.log.tgz.1
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas      7766 Jun  5 08:43 heartbeat.json
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 08:43 boinc_mmap_file
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas        28 Jun  5 08:43 wrapper_checkpoint.txt
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas      4539 Jun  5 08:44 pilotlog.txt
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas   1129472 Jun  5 08:44 log.44871837._093601.job.log.1
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas       357 Jun  5 08:44 output.list
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas       620 Jun  5 08:44 runtime_log
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas   1546240 Jun  5 08:44 result.tar.gz
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas       664 Jun  5 08:44 tvPMDmJ7he7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWbdKDmzZ01fn.diag
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas      8670 Jun  5 08:44 runtime_log.err
[2025-06-05 08:44:06] -rw-r--r-- 1 boincer umatlas     20906 Jun  5 08:44 stderr.txt
[2025-06-05 08:44:06] HITS file was successfully produced:
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas 195213518 Jun  5 08:43 shared/HITS.pool.root.1
[2025-06-05 08:44:06]  *** Contents of shared directory: ***
[2025-06-05 08:44:06] total 409052
[2025-06-05 08:44:06] -rw-r--r-- 2 boincer umatlas 221570752 Jun  5 05:10 ATLAS.root_0
[2025-06-05 08:44:06] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 05:10 start_atlas.sh
[2025-06-05 08:44:06] -rw-r--r-- 2 boincer umatlas    508876 Jun  5 05:10 input.tar.gz
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas 195213518 Jun  5 08:43 HITS.pool.root.1
[2025-06-05 08:44:06] -rw------- 1 boincer umatlas   1546240 Jun  5 08:44 result.tar.gz
08:44:08 (126895): run_atlas exited; CPU time 51969.664874
08:44:08 (126895): called boinc_finish(0)

</stderr_txt>
]]>

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