Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:08:45 (3528076): wrapper (7.7.26015): starting
05:08:45 (3528076): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 05:08:45] Arguments: --nthreads 8
[2025-06-05 05:08:45] Threads: 8
[2025-06-05 05:08:45] Checking for CVMFS
[2025-06-05 05:08:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:08:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:08:46] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:08:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:08:47] 2.12.6.0 861369 34040 527692 146812 1 495 27612943 40960001 15098 16776704 0 159314319 99.662 146757175 26139 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 05:08:47] CVMFS is ok
[2025-06-05 05:08:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:08:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:08:47] Further information can be found at the LHC@home message board.
[2025-06-05 05:08:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:08:47] Checking for apptainer binary...
[2025-06-05 05:08:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:08:47] Running /usr/bin/apptainer --version
[2025-06-05 05:08:47] apptainer version 1.4.1-1.el9
[2025-06-05 05:08:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:08:47] c7-13-33.aglt2.org
[2025-06-05 05:08:47] apptainer works
[2025-06-05 05:08:47] Set ATHENA_PROC_NUMBER=8
[2025-06-05 05:08:47] Set ATHENA_CORE_NUMBER=8
[2025-06-05 05:08:48] Starting ATLAS job with PandaID=6667885879
[2025-06-05 05:08:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:02:58]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:02:58] 2025-06-05 11:02:42,016 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 07:02:58] 2025-06-05 11:02:42,016 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667885879/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:02:58] 2025-06-05 11:02:42,017 | INFO     | extracted standard info from prmon json
[2025-06-05 07:02:58] 2025-06-05 11:02:42,017 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:02:58] 2025-06-05 11:02:42,017 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:02:58] 2025-06-05 11:02:42,018 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:02:58] 2025-06-05 11:02:42,018 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:02:58] 2025-06-05 11:02:42,019 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:02:58] 2025-06-05 11:02:42,019 | INFO     | sum of square deviations: 412663329.05454516
[2025-06-05 07:02:58] 2025-06-05 11:02:42,020 | INFO     | sum of deviations: 24203525908.58181
[2025-06-05 07:02:58] 2025-06-05 11:02:42,020 | INFO     | mean x: 1749118019.5636363
[2025-06-05 07:02:58] 2025-06-05 11:02:42,020 | INFO     | mean y: 2129851.845454545
[2025-06-05 07:02:58] 2025-06-05 11:02:42,020 | INFO     | -- intersect: -102587124688.09459
[2025-06-05 07:02:58] 2025-06-05 11:02:42,020 | INFO     | intersect: -102587124688.09459
[2025-06-05 07:02:58] 2025-06-05 11:02:42,020 | INFO     | chi2: 3.544522691429077
[2025-06-05 07:02:58] 2025-06-05 11:02:42,020 | INFO     | sum of square deviations: 358906316.5333342
[2025-06-05 07:02:58] 2025-06-05 11:02:42,021 | INFO     | sum of deviations: 29198475413.2
[2025-06-05 07:02:58] 2025-06-05 11:02:42,021 | INFO     | mean x: 1749117867.0666666
[2025-06-05 07:02:58] 2025-06-05 11:02:42,021 | INFO     | mean y: 2143379.8285714285
[2025-06-05 07:02:58] 2025-06-05 11:02:42,021 | INFO     | -- intersect: -142295644883.23062
[2025-06-05 07:02:58] 2025-06-05 11:02:42,021 | INFO     | intersect: -142295644883.23062
[2025-06-05 07:02:58] 2025-06-05 11:02:42,021 | INFO     | chi2: 2.859895557905154
[2025-06-05 07:02:58] 2025-06-05 11:02:42,021 | INFO     | current chi2=2.859895557905154 (change=19.31507266632551 %)
[2025-06-05 07:02:58] 2025-06-05 11:02:42,021 | INFO     | right removable region: 104
[2025-06-05 07:02:58] 2025-06-05 11:02:42,021 | INFO     | sum of square deviations: 358902046.5333342
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | sum of deviations: 2091957670.3333368
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | mean x: 1749118172.0666666
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | mean y: 2192069.380952381
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | -- intersect: -10193016377.374
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | intersect: -10193016377.374
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | chi2: 1.2783982791895379
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | current chi2=1.2783982791895379 (change=63.93313316117848 %)
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | sum of square deviations: 310024576.50999916
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | sum of deviations: -7649475084.730001
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | mean x: 1749118324.57
[2025-06-05 07:02:58] 2025-06-05 11:02:42,022 | INFO     | mean y: 2222276.89
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | -- intersect: 43159565461.298355
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | intersect: 43159565461.298355
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | chi2: 0.8318816904839175
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | current chi2=0.8318816904839175 (change=34.92781521801618 %)
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | sum of square deviations: 265798356.48420998
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | sum of deviations: -10174372917.673683
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | mean x: 1749118477.0736842
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | mean y: 2230766.8105263156
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | -- intersect: 66955931678.79614
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | intersect: 66955931678.79614
[2025-06-05 07:02:58] 2025-06-05 11:02:42,023 | INFO     | chi2: 0.7463932171056807
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | current chi2=0.7463932171056807 (change=10.276518206393852 %)
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | left removable region: 30
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | sum of square deviations: 125624652.44594589
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | sum of deviations: -4729404279.905407
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | mean x: 1749118751.5270271
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | mean y: 2253785.2027027025
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | -- intersect: 65851508278.4173
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | intersect: 65851508278.4173
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | chi2: 0.038494493774496645
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | -- intersect: 65851508278.4173
[2025-06-05 07:02:58] 2025-06-05 11:02:42,024 | INFO     | current memory leak: -37.65 B/s (using 74 data points, chi2=0.04)
[2025-06-05 07:02:58] 2025-06-05 11:02:42,025 | INFO     | ..............................
[2025-06-05 07:02:58] 2025-06-05 11:02:42,025 | INFO     | . Timing measurements:
[2025-06-05 07:02:58] 2025-06-05 11:02:42,025 | INFO     | . get job = 0 s
[2025-06-05 07:02:58] 2025-06-05 11:02:42,025 | INFO     | . initial setup = 3 s
[2025-06-05 07:02:58] 2025-06-05 11:02:42,025 | INFO     | . payload setup = 40 s
[2025-06-05 07:02:58] 2025-06-05 11:02:42,025 | INFO     | . stage-in = 0 s
[2025-06-05 07:02:58] 2025-06-05 11:02:42,025 | INFO     | . payload execution = 6673 s
[2025-06-05 07:02:58] 2025-06-05 11:02:42,025 | INFO     | . stage-out = 0 s
[2025-06-05 07:02:58] 2025-06-05 11:02:42,025 | INFO     | . log creation = 0 s
[2025-06-05 07:02:58] 2025-06-05 11:02:42,025 | INFO     | ..............................
[2025-06-05 07:02:58] 2025-06-05 11:02:42,575 | INFO     | 
[2025-06-05 07:02:58] 2025-06-05 11:02:42,575 | INFO     | job summary report
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | --------------------------------------------------
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | PanDA job id: 6667885879
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | task id: 44871837
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | errors: (none)
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | pilot state: finished 
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | transexitcode: 0
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | exeerrorcode: 0
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | exeerrordiag: 
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | exitcode: 0
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | exitmsg: OK
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | cpuconsumptiontime: 39221 s
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | nevents: 400
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | neventsw: 0
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | pid: 3552397
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | pgrp: 3552397
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | corecount: 8
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | event service: False
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | sizes: {0: 2396564, 1: 2397420, 2: 2397420, 13: 2397448, 23: 2397504, 28: 2397738, 34: 2397894, 6717: 2424856, 6718: 2433797, 6720: 2433853, 6725: 2434023}
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | --------------------------------------------------
[2025-06-05 07:02:58] 2025-06-05 11:02:42,576 | INFO     | 
[2025-06-05 07:02:58] 2025-06-05 11:02:42,577 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 07:02:58] 2025-06-05 11:02:42,597 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,597 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:02:58] 2025-06-05 11:02:42,598 | INFO     | job 6667885879 has completed (purged errors)
[2025-06-05 07:02:58] 2025-06-05 11:02:42,599 | INFO     | overall cleanup function is called
[2025-06-05 07:02:58] 2025-06-05 11:02:43,606 | INFO     | --- collectZombieJob: --- 10, [3552397]
[2025-06-05 07:02:58] 2025-06-05 11:02:43,606 | INFO     | zombie collector waiting for pid 3552397
[2025-06-05 07:02:58] 2025-06-05 11:02:43,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:02:58] 2025-06-05 11:02:43,606 | INFO     | collected zombie processes
[2025-06-05 07:02:58] 2025-06-05 11:02:43,606 | INFO     | will attempt to kill all subprocesses of pid=3552397
[2025-06-05 07:02:58] 2025-06-05 11:02:43,849 | INFO     | process IDs to be killed: [3552397] (in reverse order)
[2025-06-05 07:02:58] 2025-06-05 11:02:43,949 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:02:58] 2025-06-05 11:02:43,949 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:02:58] 2025-06-05 11:02:43,964 | INFO     | did not find any defunct processes belonging to 3552397
[2025-06-05 07:02:58] 2025-06-05 11:02:43,977 | INFO     | did not find any defunct processes belonging to 3552397
[2025-06-05 07:02:58] 2025-06-05 11:02:43,977 | INFO     | ready for new job
[2025-06-05 07:02:58] 2025-06-05 11:02:43,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:02:58] 2025-06-05 11:02:43,979 | INFO     | **************************************
[2025-06-05 07:02:58] 2025-06-05 11:02:43,979 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:02:58] 2025-06-05 11:02:43,979 | INFO     | **************************************
[2025-06-05 07:02:58] 2025-06-05 11:02:43,979 | INFO     | 
[2025-06-05 07:02:58] 2025-06-05 11:02:43,995 | INFO     | architecture information:
[2025-06-05 07:02:58] 2025-06-05 11:02:43,995 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:02:58] 2025-06-05 11:02:44,013 | INFO     | cat /etc/os-release:
[2025-06-05 07:02:58] NAME="CentOS Linux"
[2025-06-05 07:02:58] VERSION="7 (Core)"
[2025-06-05 07:02:58] ID="centos"
[2025-06-05 07:02:58] ID_LIKE="rhel fedora"
[2025-06-05 07:02:58] VERSION_ID="7"
[2025-06-05 07:02:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:02:58] ANSI_COLOR="0;31"
[2025-06-05 07:02:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:02:58] HOME_URL="https://www.centos.org/"
[2025-06-05 07:02:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:02:58] 
[2025-06-05 07:02:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:02:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:02:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:02:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:02:58] 
[2025-06-05 07:02:58] 2025-06-05 11:02:44,014 | INFO     | **************************************
[2025-06-05 07:02:58] 2025-06-05 11:02:44,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 07:02:58] 2025-06-05 11:02:44,532 | INFO     | sufficient remaining disk space (86497034240 B)
[2025-06-05 07:02:58] 2025-06-05 11:02:44,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:02:58] 2025-06-05 11:02:44,532 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:02:58] 2025-06-05 11:02:44,532 | INFO     | update_server=False
[2025-06-05 07:02:58] 2025-06-05 11:02:44,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:02:58] 2025-06-05 11:02:44,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:02:58] 2025-06-05 11:02:44,533 | INFO     | aborting loop
[2025-06-05 07:02:58] 2025-06-05 11:02:44,549 | INFO     | all payload control threads have been joined
[2025-06-05 07:02:58] 2025-06-05 11:02:44,656 | INFO     | all data control threads have been joined
[2025-06-05 07:02:58] 2025-06-05 11:02:45,289 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:02:58] 2025-06-05 11:02:45,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:02:58] 2025-06-05 11:02:45,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:02:58] 2025-06-05 11:02:45,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:02:58] 2025-06-05 11:02:45,537 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:45,538 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:45,554 | INFO     | [payload] control thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:45,662 | INFO     | [data] control thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:45,664 | INFO     | [job] validate thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:45,713 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:45,836 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:45,860 | INFO     | all job control threads have been joined
[2025-06-05 07:02:58] 2025-06-05 11:02:45,900 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:46,128 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:46,489 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:46,538 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:46,865 | INFO     | [job] control thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:46,909 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:47,094 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:02:58] 2025-06-05 11:02:47,529 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:47,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:02:58] 2025-06-05 11:02:48,099 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:51,857 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:02:58] 2025-06-05 11:02:52,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140553701410624)>', '<ExcThread(monitor, started 140553427588864)>']
[2025-06-05 07:02:58] 2025-06-05 11:02:53,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:02:58] 2025-06-05 11:02:53,329 | INFO     | [monitor] control thread has ended
[2025-06-05 07:02:58] 2025-06-05 11:02:58,014 | INFO     | all workflow threads have been joined
[2025-06-05 07:02:58] 2025-06-05 11:02:58,014 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:02:58] 2025-06-05 11:02:58,014 | INFO     | traces error code: 0
[2025-06-05 07:02:58] 2025-06-05 11:02:58,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:02:58] 2025-06-05 11:02:58,147 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:02:58] 2025-06-05 11:02:58,152 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:02:58] 2025-06-05 11:02:58,155 [wrapper] pilotpid: 3533819
[2025-06-05 07:02:58] 2025-06-05 11:02:58,159 [wrapper] Pilot exit status: 0
[2025-06-05 07:02:58] 2025-06-05 11:02:58,172 [wrapper] pandaids: 6667885879
[2025-06-05 07:02:58] 2025-06-05 11:02:58,250 [wrapper] cleanup supervisor_pilot  216531 3533820
[2025-06-05 07:02:58] 2025-06-05 11:02:58,253 [wrapper] Test setup, not cleaning
[2025-06-05 07:02:58] 2025-06-05 11:02:58,256 [wrapper] apfmon messages muted
[2025-06-05 07:02:58] 2025-06-05 11:02:58,258 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:02:58] 2025-06-05 11:02:58,260 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:02:58]  *** Error codes and diagnostics ***
[2025-06-05 07:02:58]     "exeErrorCode": 0,
[2025-06-05 07:02:58]     "exeErrorDiag": "",
[2025-06-05 07:02:58]     "pilotErrorCode": 0,
[2025-06-05 07:02:58]     "pilotErrorDiag": "",
[2025-06-05 07:02:58]  *** Listing of results directory ***
[2025-06-05 07:02:58] total 414756
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas    495897 May 27 22:39 pilot3.tar.gz
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas      5111 May 27 22:50 queuedata.json
[2025-06-05 07:02:58] -rwx------. 1 boincer umatlas     37140 May 27 22:56 runpilot2-wrapper.sh
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas       100 Jun  5 05:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:02:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 05:08 run_atlas
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas       105 Jun  5 05:08 job.xml
[2025-06-05 07:02:58] -rw-r--r--. 2 boincer umatlas 222064211 Jun  5 05:08 EVNT.44871834._003037.pool.root.1
[2025-06-05 07:02:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 05:08 start_atlas.sh
[2025-06-05 07:02:58] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 05:08 shared
[2025-06-05 07:02:58] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 05:08 input.tar.gz
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas         0 Jun  5 05:08 boinc_lockfile
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 05:08 pandaJob.out
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas    983281 Jun  5 05:09 agis_schedconf.cvmfs.json
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas   1598969 Jun  5 05:09 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:02:58] drwx------. 4 boincer umatlas      4096 Jun  5 05:09 pilot3
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas      6896 Jun  5 06:58 init_data.xml
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas        95 Jun  5 07:01 pilot_heartbeat.json
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas       529 Jun  5 07:02 boinc_task_state.xml
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas 196906052 Jun  5 07:02 HITS.44871837._077614.pool.root.1
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas      1030 Jun  5 07:02 memory_monitor_summary.json
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas    318335 Jun  5 07:02 log.44871837._077614.job.log.tgz.1
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas      7690 Jun  5 07:02 heartbeat.json
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 07:02 boinc_mmap_file
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas        27 Jun  5 07:02 wrapper_checkpoint.txt
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas      4353 Jun  5 07:02 pilotlog.txt
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas    636536 Jun  5 07:02 log.44871837._077614.job.log.1
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas       357 Jun  5 07:02 output.list
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas       620 Jun  5 07:02 runtime_log
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas    972800 Jun  5 07:02 result.tar.gz
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas      8659 Jun  5 07:02 runtime_log.err
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas       653 Jun  5 07:02 1AcNDmg8Le7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ5aKDmYjndmn.diag
[2025-06-05 07:02:58] -rw-r--r--. 1 boincer umatlas     20917 Jun  5 07:02 stderr.txt
[2025-06-05 07:02:58] HITS file was successfully produced:
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas 196906052 Jun  5 07:02 shared/HITS.pool.root.1
[2025-06-05 07:02:58]  *** Contents of shared directory: ***
[2025-06-05 07:02:58] total 410628
[2025-06-05 07:02:58] -rw-r--r--. 2 boincer umatlas 222064211 Jun  5 05:08 ATLAS.root_0
[2025-06-05 07:02:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 05:08 start_atlas.sh
[2025-06-05 07:02:58] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 05:08 input.tar.gz
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas 196906052 Jun  5 07:02 HITS.pool.root.1
[2025-06-05 07:02:58] -rw-------. 1 boincer umatlas    972800 Jun  5 07:02 result.tar.gz
07:03:00 (3528076): run_atlas exited; CPU time 39223.172177
07:03:00 (3528076): called boinc_finish(0)

</stderr_txt>
]]>

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