Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:03:49 (42315): wrapper (7.7.26015): starting
05:03:49 (42315): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 05:03:49] Arguments: --nthreads 8
[2025-06-05 05:03:49] Threads: 8
[2025-06-05 05:03:49] Checking for CVMFS
[2025-06-05 05:03:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:03:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:03:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:03:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:03:50] 2.11.2.0 72091 2360 127892 146812 2 350 17637844 18432000 19710 130560 0 25034150 99.811 7964487 54973 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 05:03:50] CVMFS is ok
[2025-06-05 05:03:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:03:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:03:50] Further information can be found at the LHC@home message board.
[2025-06-05 05:03:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:03:50] Checking for apptainer binary...
[2025-06-05 05:03:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:03:50] Running /usr/bin/apptainer --version
[2025-06-05 05:03:50] apptainer version 1.3.2-1.el7
[2025-06-05 05:03:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:03:53] c-212-4.aglt2.org
[2025-06-05 05:03:53] apptainer works
[2025-06-05 05:03:53] Set ATHENA_PROC_NUMBER=8
[2025-06-05 05:03:53] Set ATHENA_CORE_NUMBER=8
[2025-06-05 05:03:53] Starting ATLAS job with PandaID=6680558822
[2025-06-05 05:03:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:42:59]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:42:59]  is_altstaged=None
[2025-06-05 06:42:59]  is_tar=False
[2025-06-05 06:42:59]  lfn=log.45006595._057079.job.log.tgz.1
[2025-06-05 06:42:59]  mtime=0
[2025-06-05 06:42:59]  protocol_id=None
[2025-06-05 06:42:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 06:42:59]  replicas=None
[2025-06-05 06:42:59]  scope=mc23_13p6TeV
[2025-06-05 06:42:59]  status=None
[2025-06-05 06:42:59]  status_code=0
[2025-06-05 06:42:59]  storage_token=
[2025-06-05 06:42:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6680558822/log.45006595._057079.job.log.tgz.1
[2025-06-05 06:42:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/75/log.45006595._057079.job.log.tgz.1
[2025-06-05 06:42:59]  workdir=None
[2025-06-05 06:42:59] ]
[2025-06-05 06:42:59] 2025-06-05 10:42:29,544 | INFO     | transferring file log.45006595._057079.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6680558822/log.45006595._057079.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 06:42:59] 2025-06-05 10:42:29,545 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6680558822/log.45006595._057079.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._057079.job
[2025-06-05 06:42:59] 2025-06-05 10:42:29,564 | INFO     | adding to output.list: log.45006595._057079.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/75/log.45006595._057079.job.log.tg
[2025-06-05 06:42:59] 2025-06-05 10:42:29,564 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 06:42:59] 2025-06-05 10:42:29,565 | INFO     | summary of transferred files:
[2025-06-05 06:42:59] 2025-06-05 10:42:29,565 | INFO     |  -- lfn=log.45006595._057079.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 06:42:59] 2025-06-05 10:42:29,565 | INFO     | stage-out finished correctly
[2025-06-05 06:42:59] 2025-06-05 10:42:30,813 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 06:42:59] 2025-06-05 10:42:32,392 | INFO     | job 6680558822 has state=finished
[2025-06-05 06:42:59] 2025-06-05 10:42:32,392 | INFO     | preparing for final server update for job 6680558822 in state='finished'
[2025-06-05 06:42:59] 2025-06-05 10:42:32,392 | INFO     | this job has now completed (state=finished)
[2025-06-05 06:42:59] 2025-06-05 10:42:32,392 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 06:42:59] 2025-06-05 10:42:32,392 | INFO     | log transfer has been attempted: DONE
[2025-06-05 06:42:59] 2025-06-05 10:42:32,392 | INFO     | job 6680558822 has finished - writing final server update
[2025-06-05 06:42:59] 2025-06-05 10:42:32,393 | INFO     | total number of processed events: 400 (read)
[2025-06-05 06:42:59] 2025-06-05 10:42:32,402 | INFO     | executing command: lscpu
[2025-06-05 06:42:59] 2025-06-05 10:42:32,438 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 06:42:59] 2025-06-05 10:42:33,353 | WARNING  | process 61181 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 06:42:59] 2025-06-05 10:42:33,353 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680558822/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 06:42:59] 2025-06-05 10:42:33,611 | INFO     | number of running child processes to parent process 61181: 1
[2025-06-05 06:42:59] 2025-06-05 10:42:33,612 | INFO     | maximum number of monitored processes: 6
[2025-06-05 06:42:59] 2025-06-05 10:42:36,116 | INFO     | monitor loop #424: job 0:6680558822 is in state 'finished'
[2025-06-05 06:42:59] 2025-06-05 10:42:36,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 06:42:59] 2025-06-05 10:42:38,620 | INFO     | monitor loop #425: job 0:6680558822 is in state 'finished'
[2025-06-05 06:42:59] 2025-06-05 10:42:38,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 06:42:59] 2025-06-05 10:42:39,294 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 06:42:59] 2025-06-05 10:42:39,295 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680558822/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 06:42:59] 2025-06-05 10:42:39,295 | INFO     | extracted standard info from prmon json
[2025-06-05 06:42:59] 2025-06-05 10:42:39,296 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:42:59] 2025-06-05 10:42:39,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:42:59] 2025-06-05 10:42:39,296 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:42:59] 2025-06-05 10:42:39,296 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:42:59] 2025-06-05 10:42:39,298 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:42:59] 2025-06-05 10:42:39,298 | INFO     | sum of square deviations: 211285822.0
[2025-06-05 06:42:59] 2025-06-05 10:42:39,298 | INFO     | sum of deviations: 1495117594.5
[2025-06-05 06:42:59] 2025-06-05 10:42:39,298 | INFO     | mean x: 1749117346.5
[2025-06-05 06:42:59] 2025-06-05 10:42:39,298 | INFO     | mean y: 2491989.9886363638
[2025-06-05 06:42:59] 2025-06-05 10:42:39,299 | INFO     | -- intersect: -12374751758.989952
[2025-06-05 06:42:59] 2025-06-05 10:42:39,299 | INFO     | intersect: -12374751758.989952
[2025-06-05 06:42:59] 2025-06-05 10:42:39,299 | INFO     | chi2: 0.012478067263839467
[2025-06-05 06:42:59] 2025-06-05 10:42:39,299 | INFO     | -- intersect: -12374751758.989952
[2025-06-05 06:42:59] 2025-06-05 10:42:39,299 | INFO     | current memory leak: 7.08 B/s (using 88 data points, chi2=0.01)
[2025-06-05 06:42:59] 2025-06-05 10:42:39,299 | INFO     | ..............................
[2025-06-05 06:42:59] 2025-06-05 10:42:39,299 | INFO     | . Timing measurements:
[2025-06-05 06:42:59] 2025-06-05 10:42:39,299 | INFO     | . get job = 0 s
[2025-06-05 06:42:59] 2025-06-05 10:42:39,300 | INFO     | . initial setup = 4 s
[2025-06-05 06:42:59] 2025-06-05 10:42:39,300 | INFO     | . payload setup = 35 s
[2025-06-05 06:42:59] 2025-06-05 10:42:39,300 | INFO     | . stage-in = 0 s
[2025-06-05 06:42:59] 2025-06-05 10:42:39,300 | INFO     | . payload execution = 5792 s
[2025-06-05 06:42:59] 2025-06-05 10:42:39,300 | INFO     | . stage-out = 0 s
[2025-06-05 06:42:59] 2025-06-05 10:42:39,300 | INFO     | . log creation = 0 s
[2025-06-05 06:42:59] 2025-06-05 10:42:39,300 | INFO     | ..............................
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | 
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | job summary report
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | --------------------------------------------------
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | PanDA job id: 6680558822
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | task id: 45006595
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | errors: (none)
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | pilot state: finished 
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | transexitcode: 0
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | exeerrorcode: 0
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | exeerrordiag: 
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | exitcode: 0
[2025-06-05 06:42:59] 2025-06-05 10:42:39,442 | INFO     | exitmsg: OK
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | cpuconsumptiontime: 30014 s
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | nevents: 400
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | neventsw: 0
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | pid: 61181
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | pgrp: 61181
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | corecount: 8
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | event service: False
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | sizes: {0: 2397289, 1: 2397289, 11: 2397317, 21: 2397551, 22: 2397579, 5831: 2424234, 5832: 2433175, 5833: 2433231, 5842: 2433401}
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | --------------------------------------------------
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | 
[2025-06-05 06:42:59] 2025-06-05 10:42:39,443 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 06:42:59] 2025-06-05 10:42:39,459 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,459 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:42:59] 2025-06-05 10:42:39,460 | INFO     | job 6680558822 has completed (purged errors)
[2025-06-05 06:42:59] 2025-06-05 10:42:39,461 | INFO     | overall cleanup function is called
[2025-06-05 06:42:59] 2025-06-05 10:42:40,468 | INFO     | --- collectZombieJob: --- 10, [61181]
[2025-06-05 06:42:59] 2025-06-05 10:42:40,469 | INFO     | zombie collector waiting for pid 61181
[2025-06-05 06:42:59] 2025-06-05 10:42:40,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:42:59] 2025-06-05 10:42:40,469 | INFO     | collected zombie processes
[2025-06-05 06:42:59] 2025-06-05 10:42:40,469 | INFO     | will attempt to kill all subprocesses of pid=61181
[2025-06-05 06:42:59] 2025-06-05 10:42:40,888 | INFO     | process IDs to be killed: [61181] (in reverse order)
[2025-06-05 06:42:59] 2025-06-05 10:42:41,088 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:42:59] 2025-06-05 10:42:41,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:42:59] 2025-06-05 10:42:41,097 | INFO     | did not find any defunct processes belonging to 61181
[2025-06-05 06:42:59] 2025-06-05 10:42:41,105 | INFO     | did not find any defunct processes belonging to 61181
[2025-06-05 06:42:59] 2025-06-05 10:42:41,105 | INFO     | ready for new job
[2025-06-05 06:42:59] 2025-06-05 10:42:41,106 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:42:59] 2025-06-05 10:42:41,107 | INFO     | **************************************
[2025-06-05 06:42:59] 2025-06-05 10:42:41,107 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:42:59] 2025-06-05 10:42:41,107 | INFO     | **************************************
[2025-06-05 06:42:59] 2025-06-05 10:42:41,108 | INFO     | 
[2025-06-05 06:42:59] 2025-06-05 10:42:41,112 | INFO     | architecture information:
[2025-06-05 06:42:59] 2025-06-05 10:42:41,113 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:42:59] 2025-06-05 10:42:41,127 | INFO     | cat /etc/os-release:
[2025-06-05 06:42:59] NAME="CentOS Linux"
[2025-06-05 06:42:59] VERSION="7 (Core)"
[2025-06-05 06:42:59] ID="centos"
[2025-06-05 06:42:59] ID_LIKE="rhel fedora"
[2025-06-05 06:42:59] VERSION_ID="7"
[2025-06-05 06:42:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:42:59] ANSI_COLOR="0;31"
[2025-06-05 06:42:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:42:59] HOME_URL="https://www.centos.org/"
[2025-06-05 06:42:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:42:59] 
[2025-06-05 06:42:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:42:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:42:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:42:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:42:59] 
[2025-06-05 06:42:59] 2025-06-05 10:42:41,128 | INFO     | **************************************
[2025-06-05 06:42:59] 2025-06-05 10:42:41,632 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 06:42:59] 2025-06-05 10:42:41,669 | INFO     | sufficient remaining disk space (106706239488 B)
[2025-06-05 06:42:59] 2025-06-05 10:42:41,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:42:59] 2025-06-05 10:42:41,669 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:42:59] 2025-06-05 10:42:41,669 | INFO     | update_server=False
[2025-06-05 06:42:59] 2025-06-05 10:42:41,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:42:59] 2025-06-05 10:42:41,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:42:59] 2025-06-05 10:42:41,922 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:42:59] 2025-06-05 10:42:41,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:42:59] 2025-06-05 10:42:41,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:42:59] 2025-06-05 10:42:42,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:42:59] 2025-06-05 10:42:42,125 | INFO     | aborting loop
[2025-06-05 06:42:59] 2025-06-05 10:42:42,171 | INFO     | all job control threads have been joined
[2025-06-05 06:42:59] 2025-06-05 10:42:42,200 | INFO     | all data control threads have been joined
[2025-06-05 06:42:59] 2025-06-05 10:42:42,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:42:59] 2025-06-05 10:42:42,675 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:42,698 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:42,710 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:43,131 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:43,165 | INFO     | all payload control threads have been joined
[2025-06-05 06:42:59] 2025-06-05 10:42:43,177 | INFO     | [job] control thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:43,205 | INFO     | [data] control thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:43,295 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:43,563 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:43,729 | INFO     | [job] validate thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:43,923 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:44,166 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:44,171 | INFO     | [payload] control thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:44,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:42:59] 2025-06-05 10:42:44,664 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:45,391 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:45,678 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:52,629 | INFO     | job.realtimelogging is not enabled
[2025-06-05 06:42:59] 2025-06-05 10:42:53,635 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:42:59] 2025-06-05 10:42:53,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815134852928)>', '<ExcThread(monitor, started 139814322034432)>']
[2025-06-05 06:42:59] 2025-06-05 10:42:53,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:42:59] 2025-06-05 10:42:53,987 | INFO     | [monitor] control thread has ended
[2025-06-05 06:42:59] 2025-06-05 10:42:58,876 | INFO     | all workflow threads have been joined
[2025-06-05 06:42:59] 2025-06-05 10:42:58,877 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:42:59] 2025-06-05 10:42:58,877 | INFO     | traces error code: 0
[2025-06-05 06:42:59] 2025-06-05 10:42:58,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:42:59] 2025-06-05 10:42:59,064 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:42:59] 2025-06-05 10:42:59,067 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:42:59] 2025-06-05 10:42:59,070 [wrapper] pilotpid: 49772
[2025-06-05 06:42:59] 2025-06-05 10:42:59,072 [wrapper] Pilot exit status: 0
[2025-06-05 06:42:59] 2025-06-05 10:42:59,116 [wrapper] pandaids: 6680558822
[2025-06-05 06:42:59] 2025-06-05 10:42:59,176 [wrapper] cleanup supervisor_pilot 18269 49773
[2025-06-05 06:42:59] 2025-06-05 10:42:59,180 [wrapper] Test setup, not cleaning
[2025-06-05 06:42:59] 2025-06-05 10:42:59,187 [wrapper] apfmon messages muted
[2025-06-05 06:42:59] 2025-06-05 10:42:59,190 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:42:59] 2025-06-05 10:42:59,192 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:42:59]  *** Error codes and diagnostics ***
[2025-06-05 06:42:59]     "exeErrorCode": 0,
[2025-06-05 06:42:59]     "exeErrorDiag": "",
[2025-06-05 06:42:59]     "pilotErrorCode": 0,
[2025-06-05 06:42:59]     "pilotErrorDiag": "",
[2025-06-05 06:42:59]  *** Listing of results directory ***
[2025-06-05 06:42:59] total 390864
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas    495897 Jun  5 04:45 pilot3.tar.gz
[2025-06-05 06:42:59] -rwx------ 1 boincer umatlas     37140 Jun  5 05:03 runpilot2-wrapper.sh
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas      5112 Jun  5 05:03 queuedata.json
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas       100 Jun  5 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:42:59] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 05:03 run_atlas
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas       105 Jun  5 05:03 job.xml
[2025-06-05 06:42:59] -rw-r--r-- 2 boincer umatlas 215357216 Jun  5 05:03 EVNT.45006593._002053.pool.root.1
[2025-06-05 06:42:59] -rw-r--r-- 2 boincer umatlas     15095 Jun  5 05:03 start_atlas.sh
[2025-06-05 06:42:59] drwxrwx--x 2 boincer umatlas      4096 Jun  5 05:03 shared
[2025-06-05 06:42:59] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 05:03 input.tar.gz
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas         0 Jun  5 05:03 boinc_lockfile
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas      2523 Jun  5 05:03 pandaJob.out
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas    983281 Jun  5 05:04 agis_schedconf.cvmfs.json
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas   1598969 Jun  5 05:04 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:42:59] drwx------ 4 boincer umatlas      4096 Jun  5 05:04 pilot3
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas      6386 Jun  5 06:37 init_data.xml
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas 179339756 Jun  5 06:41 HITS.45006595._057079.pool.root.1
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas       529 Jun  5 06:42 boinc_task_state.xml
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas        95 Jun  5 06:42 pilot_heartbeat.json
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas      1097 Jun  5 06:42 memory_monitor_summary.json
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas    306099 Jun  5 06:42 log.45006595._057079.job.log.tgz.1
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas      7765 Jun  5 06:42 heartbeat.json
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 06:42 boinc_mmap_file
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas        27 Jun  5 06:42 wrapper_checkpoint.txt
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas      4426 Jun  5 06:42 pilotlog.txt
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas    551429 Jun  5 06:42 log.45006595._057079.job.log.1
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas       357 Jun  5 06:42 output.list
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas       620 Jun  5 06:42 runtime_log
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas    880640 Jun  5 06:42 result.tar.gz
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas      8655 Jun  5 06:42 runtime_log.err
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas       659 Jun  5 06:42 j0jNDmZgLh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO5nKDmszSdzn.diag
[2025-06-05 06:42:59] -rw-r--r-- 1 boincer umatlas     21398 Jun  5 06:42 stderr.txt
[2025-06-05 06:42:59] HITS file was successfully produced:
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas 179339756 Jun  5 06:41 shared/HITS.pool.root.1
[2025-06-05 06:42:59]  *** Contents of shared directory: ***
[2025-06-05 06:42:59] total 386832
[2025-06-05 06:42:59] -rw-r--r-- 2 boincer umatlas 215357216 Jun  5 05:03 ATLAS.root_0
[2025-06-05 06:42:59] -rw-r--r-- 2 boincer umatlas     15095 Jun  5 05:03 start_atlas.sh
[2025-06-05 06:42:59] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 05:03 input.tar.gz
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas 179339756 Jun  5 06:41 HITS.pool.root.1
[2025-06-05 06:42:59] -rw------- 1 boincer umatlas    880640 Jun  5 06:42 result.tar.gz
06:43:01 (42315): run_atlas exited; CPU time 29826.492988
06:43:01 (42315): called boinc_finish(0)

</stderr_txt>
]]>

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