Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:01:51 (15676): wrapper (7.7.26015): starting
05:01:51 (15676): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 05:01:51] Arguments: --nthreads 10
[2025-06-05 05:01:51] Threads: 10
[2025-06-05 05:01:51] Checking for CVMFS
[2025-06-05 05:01:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:01:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:01:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:01:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:01:51] 2.11.2.0 5464 111608 307140 146812 3 412 15950234 18432000 6580 130560 0 180614388 99.265 468885728 37753 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 05:01:51] CVMFS is ok
[2025-06-05 05:01:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:01:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:01:51] Further information can be found at the LHC@home message board.
[2025-06-05 05:01:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:01:51] Checking for apptainer binary...
[2025-06-05 05:01:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:01:51] Running /usr/bin/apptainer --version
[2025-06-05 05:01:51] apptainer version 1.3.2-1.el7
[2025-06-05 05:01:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:01:52] c-210-12.aglt2.org
[2025-06-05 05:01:52] apptainer works
[2025-06-05 05:01:52] Set ATHENA_PROC_NUMBER=10
[2025-06-05 05:01:52] Set ATHENA_CORE_NUMBER=10
[2025-06-05 05:01:52] Starting ATLAS job with PandaID=6668533339
[2025-06-05 05:01:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 15:14:37]  *** The last 200 lines of the pilot log: ***
[2025-06-05 15:14:37] 2025-06-05 19:14:22,534 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 15:14:37] 2025-06-05 19:14:22,534 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 15:14:37] 2025-06-05 19:14:22,534 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 15:14:37] 2025-06-05 19:14:22,534 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 15:14:37] 2025-06-05 19:14:22,547 | INFO     | fitting pss+swap vs Time
[2025-06-05 15:14:37] 2025-06-05 19:14:22,548 | INFO     | sum of square deviations: 67649490322.48504
[2025-06-05 15:14:37] 2025-06-05 19:14:22,558 | INFO     | sum of deviations: 160478120500.9835
[2025-06-05 15:14:37] 2025-06-05 19:14:22,558 | INFO     | mean x: 1749132494.4950166
[2025-06-05 15:14:37] 2025-06-05 19:14:22,558 | INFO     | mean y: 2579640.6611295682
[2025-06-05 15:14:37] 2025-06-05 19:14:22,559 | INFO     | -- intersect: -4146712451.3512783
[2025-06-05 15:14:37] 2025-06-05 19:14:22,559 | INFO     | intersect: -4146712451.3512783
[2025-06-05 15:14:37] 2025-06-05 19:14:22,560 | INFO     | chi2: 2.415920372592976
[2025-06-05 15:14:37] 2025-06-05 19:14:22,561 | INFO     | sum of square deviations: 65977931140.0
[2025-06-05 15:14:37] 2025-06-05 19:14:22,570 | INFO     | sum of deviations: 200040683453.99976
[2025-06-05 15:14:37] 2025-06-05 19:14:22,571 | INFO     | mean x: 1749132342.0
[2025-06-05 15:14:37] 2025-06-05 19:14:22,571 | INFO     | mean y: 2583224.2780569512
[2025-06-05 15:14:37] 2025-06-05 19:14:22,571 | INFO     | -- intersect: -5300669289.092207
[2025-06-05 15:14:37] 2025-06-05 19:14:22,571 | INFO     | intersect: -5300669289.092207
[2025-06-05 15:14:37] 2025-06-05 19:14:22,572 | INFO     | chi2: 1.632971856553604
[2025-06-05 15:14:37] 2025-06-05 19:14:22,572 | INFO     | current chi2=1.632971856553604 (change=32.4078775493351 %)
[2025-06-05 15:14:37] 2025-06-05 19:14:22,573 | INFO     | sum of square deviations: 64334103503.993195
[2025-06-05 15:14:37] 2025-06-05 19:14:22,583 | INFO     | sum of deviations: 197101739892.7434
[2025-06-05 15:14:37] 2025-06-05 19:14:22,583 | INFO     | mean x: 1749132189.5033784
[2025-06-05 15:14:37] 2025-06-05 19:14:22,583 | INFO     | mean y: 2582951.628378378
[2025-06-05 15:14:37] 2025-06-05 19:14:22,583 | INFO     | -- intersect: -5356269959.598104
[2025-06-05 15:14:37] 2025-06-05 19:14:22,584 | INFO     | intersect: -5356269959.598104
[2025-06-05 15:14:37] 2025-06-05 19:14:22,584 | INFO     | chi2: 1.6330332104313856
[2025-06-05 15:14:37] 2025-06-05 19:14:22,585 | INFO     | current chi2=1.6330332104313856 (change=-0.003757191376898502 %)
[2025-06-05 15:14:37] 2025-06-05 19:14:22,585 | INFO     | right removable region: 591
[2025-06-05 15:14:37] 2025-06-05 19:14:22,586 | INFO     | sum of square deviations: 65977639069.99331
[2025-06-05 15:14:37] 2025-06-05 19:14:22,595 | INFO     | sum of deviations: 52227801476.085495
[2025-06-05 15:14:37] 2025-06-05 19:14:22,595 | INFO     | mean x: 1749132647.00335
[2025-06-05 15:14:37] 2025-06-05 19:14:22,595 | INFO     | mean y: 2589484.4572864324
[2025-06-05 15:14:37] 2025-06-05 19:14:22,595 | INFO     | -- intersect: -1382021331.127027
[2025-06-05 15:14:37] 2025-06-05 19:14:22,595 | INFO     | intersect: -1382021331.127027
[2025-06-05 15:14:37] 2025-06-05 19:14:22,596 | INFO     | chi2: 0.8575120579521709
[2025-06-05 15:14:37] 2025-06-05 19:14:22,596 | INFO     | current chi2=0.8575120579521709 (change=64.5057814123313 %)
[2025-06-05 15:14:37] 2025-06-05 19:14:22,597 | INFO     | sum of square deviations: 64333555779.91716
[2025-06-05 15:14:37] 2025-06-05 19:14:22,607 | INFO     | sum of deviations: 28802325598.19261
[2025-06-05 15:14:37] 2025-06-05 19:14:22,607 | INFO     | mean x: 1749132799.5118244
[2025-06-05 15:14:37] 2025-06-05 19:14:22,608 | INFO     | mean y: 2591653.543918919
[2025-06-05 15:14:37] 2025-06-05 19:14:22,608 | INFO     | -- intersect: -780500339.3557559
[2025-06-05 15:14:37] 2025-06-05 19:14:22,608 | INFO     | intersect: -780500339.3557559
[2025-06-05 15:14:37] 2025-06-05 19:14:22,609 | INFO     | chi2: 0.799698166792199
[2025-06-05 15:14:37] 2025-06-05 19:14:22,609 | INFO     | current chi2=0.799698166792199 (change=6.742049936654837 %)
[2025-06-05 15:14:37] 2025-06-05 19:14:22,609 | INFO     | left removable region: 20
[2025-06-05 15:14:37] 2025-06-05 19:14:22,610 | INFO     | sum of square deviations: 57727116137.43297
[2025-06-05 15:14:37] 2025-06-05 19:14:22,619 | INFO     | sum of deviations: 65524719161.35028
[2025-06-05 15:14:37] 2025-06-05 19:14:22,619 | INFO     | mean x: 1749132769.0315237
[2025-06-05 15:14:37] 2025-06-05 19:14:22,619 | INFO     | mean y: 2595315.758318739
[2025-06-05 15:14:37] 2025-06-05 19:14:22,619 | INFO     | -- intersect: -1982804980.2454882
[2025-06-05 15:14:37] 2025-06-05 19:14:22,619 | INFO     | intersect: -1982804980.2454882
[2025-06-05 15:14:37] 2025-06-05 19:14:22,620 | INFO     | chi2: 0.0046186258442853755
[2025-06-05 15:14:37] 2025-06-05 19:14:22,621 | INFO     | -- intersect: -1982804980.2454882
[2025-06-05 15:14:37] 2025-06-05 19:14:22,621 | INFO     | current memory leak: 1.14 B/s (using 571 data points, chi2=0.00)
[2025-06-05 15:14:37] 2025-06-05 19:14:22,622 | INFO     | ..............................
[2025-06-05 15:14:37] 2025-06-05 19:14:22,622 | INFO     | . Timing measurements:
[2025-06-05 15:14:37] 2025-06-05 19:14:22,622 | INFO     | . get job = 0 s
[2025-06-05 15:14:37] 2025-06-05 19:14:22,622 | INFO     | . initial setup = 2 s
[2025-06-05 15:14:37] 2025-06-05 19:14:22,622 | INFO     | . payload setup = 9 s
[2025-06-05 15:14:37] 2025-06-05 19:14:22,622 | INFO     | . stage-in = 0 s
[2025-06-05 15:14:37] 2025-06-05 19:14:22,623 | INFO     | . payload execution = 36695 s
[2025-06-05 15:14:37] 2025-06-05 19:14:22,623 | INFO     | . stage-out = 2 s
[2025-06-05 15:14:37] 2025-06-05 19:14:22,623 | INFO     | . log creation = 0 s
[2025-06-05 15:14:37] 2025-06-05 19:14:22,623 | INFO     | ..............................
[2025-06-05 15:14:37] 2025-06-05 19:14:22,739 | INFO     | 
[2025-06-05 15:14:37] 2025-06-05 19:14:22,739 | INFO     | job summary report
[2025-06-05 15:14:37] 2025-06-05 19:14:22,739 | INFO     | --------------------------------------------------
[2025-06-05 15:14:37] 2025-06-05 19:14:22,739 | INFO     | PanDA job id: 6668533339
[2025-06-05 15:14:37] 2025-06-05 19:14:22,739 | INFO     | task id: 44871837
[2025-06-05 15:14:37] 2025-06-05 19:14:22,739 | INFO     | errors: (none)
[2025-06-05 15:14:37] 2025-06-05 19:14:22,740 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 15:14:37] 2025-06-05 19:14:22,740 | INFO     | pilot state: finished 
[2025-06-05 15:14:37] 2025-06-05 19:14:22,740 | INFO     | transexitcode: 0
[2025-06-05 15:14:37] 2025-06-05 19:14:22,740 | INFO     | exeerrorcode: 0
[2025-06-05 15:14:37] 2025-06-05 19:14:22,740 | INFO     | exeerrordiag: 
[2025-06-05 15:14:37] 2025-06-05 19:14:22,740 | INFO     | exitcode: 0
[2025-06-05 15:14:37] 2025-06-05 19:14:22,740 | INFO     | exitmsg: OK
[2025-06-05 15:14:37] 2025-06-05 19:14:22,740 | INFO     | cpuconsumptiontime: 66878 s
[2025-06-05 15:14:37] 2025-06-05 19:14:22,740 | INFO     | nevents: 400
[2025-06-05 15:14:37] 2025-06-05 19:14:22,740 | INFO     | neventsw: 0
[2025-06-05 15:14:37] 2025-06-05 19:14:22,741 | INFO     | pid: 35407
[2025-06-05 15:14:37] 2025-06-05 19:14:22,741 | INFO     | pgrp: 35407
[2025-06-05 15:14:37] 2025-06-05 19:14:22,741 | INFO     | corecount: 10
[2025-06-05 15:14:37] 2025-06-05 19:14:22,741 | INFO     | event service: False
[2025-06-05 15:14:37] 2025-06-05 19:14:22,741 | INFO     | sizes: {0: 2397220, 1: 2397419, 6: 2397625, 11: 2397653, 36708: 2437496, 36711: 2446437, 36713: 2446621, 36719: 2446791}
[2025-06-05 15:14:37] 2025-06-05 19:14:22,741 | INFO     | --------------------------------------------------
[2025-06-05 15:14:37] 2025-06-05 19:14:22,741 | INFO     | 
[2025-06-05 15:14:37] 2025-06-05 19:14:22,741 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 15:14:37] 2025-06-05 19:14:22,762 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,763 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,763 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,763 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,763 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,763 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,763 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,763 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,763 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,763 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,764 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,764 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,764 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,764 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 15:14:37] 2025-06-05 19:14:22,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,765 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 15:14:37] 2025-06-05 19:14:22,765 | INFO     | job 6668533339 has completed (purged errors)
[2025-06-05 15:14:37] 2025-06-05 19:14:22,765 | INFO     | overall cleanup function is called
[2025-06-05 15:14:37] 2025-06-05 19:14:23,772 | INFO     | --- collectZombieJob: --- 10, [35407]
[2025-06-05 15:14:37] 2025-06-05 19:14:23,773 | INFO     | zombie collector waiting for pid 35407
[2025-06-05 15:14:37] 2025-06-05 19:14:23,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 15:14:37] 2025-06-05 19:14:23,773 | INFO     | collected zombie processes
[2025-06-05 15:14:37] 2025-06-05 19:14:23,773 | INFO     | will attempt to kill all subprocesses of pid=35407
[2025-06-05 15:14:37] 2025-06-05 19:14:23,881 | INFO     | process IDs to be killed: [35407] (in reverse order)
[2025-06-05 15:14:37] 2025-06-05 19:14:23,929 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 15:14:37] 2025-06-05 19:14:23,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 15:14:37] 2025-06-05 19:14:23,933 | INFO     | did not find any defunct processes belonging to 35407
[2025-06-05 15:14:37] 2025-06-05 19:14:23,936 | INFO     | did not find any defunct processes belonging to 35407
[2025-06-05 15:14:37] 2025-06-05 19:14:23,936 | INFO     | ready for new job
[2025-06-05 15:14:37] 2025-06-05 19:14:23,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 15:14:37] 2025-06-05 19:14:23,939 | INFO     | **************************************
[2025-06-05 15:14:37] 2025-06-05 19:14:23,939 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 15:14:37] 2025-06-05 19:14:23,939 | INFO     | **************************************
[2025-06-05 15:14:37] 2025-06-05 19:14:23,939 | INFO     | 
[2025-06-05 15:14:37] 2025-06-05 19:14:23,940 | INFO     | architecture information:
[2025-06-05 15:14:37] 2025-06-05 19:14:23,941 | INFO     | executing command: cat /etc/os-release
[2025-06-05 15:14:37] 2025-06-05 19:14:23,953 | INFO     | cat /etc/os-release:
[2025-06-05 15:14:37] NAME="CentOS Linux"
[2025-06-05 15:14:37] VERSION="7 (Core)"
[2025-06-05 15:14:37] ID="centos"
[2025-06-05 15:14:37] ID_LIKE="rhel fedora"
[2025-06-05 15:14:37] VERSION_ID="7"
[2025-06-05 15:14:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 15:14:37] ANSI_COLOR="0;31"
[2025-06-05 15:14:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 15:14:37] HOME_URL="https://www.centos.org/"
[2025-06-05 15:14:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 15:14:37] 
[2025-06-05 15:14:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 15:14:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 15:14:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 15:14:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 15:14:37] 
[2025-06-05 15:14:37] 2025-06-05 19:14:23,953 | INFO     | **************************************
[2025-06-05 15:14:37] 2025-06-05 19:14:24,455 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 15:14:37] 2025-06-05 19:14:24,470 | INFO     | sufficient remaining disk space (57580453888 B)
[2025-06-05 15:14:37] 2025-06-05 19:14:24,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 15:14:37] 2025-06-05 19:14:24,471 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 15:14:37] 2025-06-05 19:14:24,471 | INFO     | update_server=False
[2025-06-05 15:14:37] 2025-06-05 19:14:24,471 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 15:14:37] 2025-06-05 19:14:24,471 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:14:37] 2025-06-05 19:14:24,471 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 15:14:37] 2025-06-05 19:14:24,472 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 15:14:37] 2025-06-05 19:14:24,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 15:14:37] 2025-06-05 19:14:24,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 15:14:37] 2025-06-05 19:14:24,750 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 15:14:37] 2025-06-05 19:14:24,813 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 15:14:37] 2025-06-05 19:14:24,814 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 15:14:37] 2025-06-05 19:14:24,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 15:14:37] 2025-06-05 19:14:24,814 | INFO     | will abort loop
[2025-06-05 15:14:37] 2025-06-05 19:14:25,316 | INFO     | all data control threads have been joined
[2025-06-05 15:14:37] 2025-06-05 19:14:25,454 | INFO     | all payload control threads have been joined
[2025-06-05 15:14:37] 2025-06-05 19:14:25,473 | INFO     | [job] queue monitor thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:25,475 | INFO     | [job] retrieve thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:25,578 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:25,819 | INFO     | [job] job monitor thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:26,071 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:26,108 | INFO     | all job control threads have been joined
[2025-06-05 15:14:37] 2025-06-05 19:14:26,258 | INFO     | [data] copytool_in thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:26,322 | INFO     | [data] control thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:26,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:26,460 | INFO     | [payload] control thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:26,469 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:26,585 | INFO     | [job] validate thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:26,756 | INFO     | [data] copytool_out thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:27,026 | INFO     | [payload] failed_post thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:27,049 | INFO     | [payload] validate_post thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:27,113 | INFO     | [job] control thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:27,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 15:14:37] 2025-06-05 19:14:31,245 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 15:14:37] 2025-06-05 19:14:32,017 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386473723712)>', '<ExcThread(monitor, started 140385896621824)>']
[2025-06-05 15:14:37] 2025-06-05 19:14:32,508 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 15:14:37] 2025-06-05 19:14:32,512 | INFO     | [monitor] control thread has ended
[2025-06-05 15:14:37] 2025-06-05 19:14:37,043 | INFO     | all workflow threads have been joined
[2025-06-05 15:14:37] 2025-06-05 19:14:37,044 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 15:14:37] 2025-06-05 19:14:37,044 | INFO     | traces error code: 0
[2025-06-05 15:14:37] 2025-06-05 19:14:37,044 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 15:14:37] 2025-06-05 19:14:37,199 [wrapper] ==== pilot stdout END ====
[2025-06-05 15:14:37] 2025-06-05 19:14:37,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 15:14:37] 2025-06-05 19:14:37,205 [wrapper] pilotpid: 21886
[2025-06-05 15:14:37] 2025-06-05 19:14:37,208 [wrapper] Pilot exit status: 0
[2025-06-05 15:14:37] 2025-06-05 19:14:37,218 [wrapper] pandaids: 6668533339
[2025-06-05 15:14:37] 2025-06-05 19:14:37,259 [wrapper] cleanup supervisor_pilot  3542 21887
[2025-06-05 15:14:37] 2025-06-05 19:14:37,262 [wrapper] Test setup, not cleaning
[2025-06-05 15:14:37] 2025-06-05 19:14:37,265 [wrapper] apfmon messages muted
[2025-06-05 15:14:37] 2025-06-05 19:14:37,267 [wrapper] ==== wrapper stdout END ====
[2025-06-05 15:14:37] 2025-06-05 19:14:37,270 [wrapper] ==== wrapper stderr END ====
[2025-06-05 15:14:37]  *** Error codes and diagnostics ***
[2025-06-05 15:14:37]     "exeErrorCode": 0,
[2025-06-05 15:14:37]     "exeErrorDiag": "",
[2025-06-05 15:14:37]     "pilotErrorCode": 0,
[2025-06-05 15:14:37]     "pilotErrorDiag": "",
[2025-06-05 15:14:37]  *** Listing of results directory ***
[2025-06-05 15:14:37] total 425276
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas      5111 May 28 11:15 queuedata.json
[2025-06-05 15:14:37] -rwx------ 1 boincer umatlas     37140 May 28 11:15 runpilot2-wrapper.sh
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas    495897 May 28 11:15 pilot3.tar.gz
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas       100 Jun  5 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 15:14:37] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 05:01 run_atlas
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas       105 Jun  5 05:01 job.xml
[2025-06-05 15:14:37] -rw-r--r-- 2 boincer umatlas 221952556 Jun  5 05:01 EVNT.44871834._003357.pool.root.1
[2025-06-05 15:14:37] -rw-r--r-- 2 boincer umatlas    508872 Jun  5 05:01 input.tar.gz
[2025-06-05 15:14:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 05:01 start_atlas.sh
[2025-06-05 15:14:37] drwxrwx--x 2 boincer umatlas      4096 Jun  5 05:01 shared
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas         0 Jun  5 05:01 boinc_lockfile
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 05:01 pandaJob.out
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas    983281 Jun  5 05:02 agis_schedconf.cvmfs.json
[2025-06-05 15:14:37] drwx------ 4 boincer umatlas      4096 Jun  5 05:02 pilot3
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas      6228 Jun  5 15:10 init_data.xml
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas       531 Jun  5 15:13 boinc_task_state.xml
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas 202755684 Jun  5 15:13 HITS.44871837._086077.pool.root.1
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas        95 Jun  5 15:13 pilot_heartbeat.json
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas      1064 Jun  5 15:14 memory_monitor_summary.json
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas   1598969 Jun  5 15:14 agis_ddmendpoints.agis.ALL.json
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas    604433 Jun  5 15:14 log.44871837._086077.job.log.tgz.1
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas      7753 Jun  5 15:14 heartbeat.json
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 15:14 boinc_mmap_file
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas        28 Jun  5 15:14 wrapper_checkpoint.txt
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas      4662 Jun  5 15:14 pilotlog.txt
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas   2864647 Jun  5 15:14 log.44871837._086077.job.log.1
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas       357 Jun  5 15:14 output.list
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas       620 Jun  5 15:14 runtime_log
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas   3491840 Jun  5 15:14 result.tar.gz
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas      8662 Jun  5 15:14 runtime_log.err
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas       662 Jun  5 15:14 3H1NDmcgXe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFPcKDmPF3Q0n.diag
[2025-06-05 15:14:37] -rw-r--r-- 1 boincer umatlas     20887 Jun  5 15:14 stderr.txt
[2025-06-05 15:14:37] HITS file was successfully produced:
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas 202755684 Jun  5 15:13 shared/HITS.pool.root.1
[2025-06-05 15:14:37]  *** Contents of shared directory: ***
[2025-06-05 15:14:37] total 418692
[2025-06-05 15:14:37] -rw-r--r-- 2 boincer umatlas 221952556 Jun  5 05:01 ATLAS.root_0
[2025-06-05 15:14:37] -rw-r--r-- 2 boincer umatlas    508872 Jun  5 05:01 input.tar.gz
[2025-06-05 15:14:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 05:01 start_atlas.sh
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas 202755684 Jun  5 15:13 HITS.pool.root.1
[2025-06-05 15:14:37] -rw------- 1 boincer umatlas   3491840 Jun  5 15:14 result.tar.gz
15:14:38 (15676): run_atlas exited; CPU time 67480.368889
15:14:38 (15676): called boinc_finish(0)

</stderr_txt>
]]>

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