Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:52:43 (2363063): wrapper (7.7.26015): starting
04:52:43 (2363063): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:52:43] Arguments: --nthreads 8
[2025-06-05 04:52:43] Threads: 8
[2025-06-05 04:52:43] Checking for CVMFS
[2025-06-05 04:52:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:52:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:52:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:52:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:52:44] 2.12.6.0 4471 38538 544672 146812 3 217 19734616 32935937 16199 16776704 0 160615571 99.572 189287070 27965 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 04:52:44] CVMFS is ok
[2025-06-05 04:52:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:52:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:52:44] Further information can be found at the LHC@home message board.
[2025-06-05 04:52:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:52:44] Checking for apptainer binary...
[2025-06-05 04:52:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:52:44] Running /usr/bin/apptainer --version
[2025-06-05 04:52:44] apptainer version 1.4.1-1.el9
[2025-06-05 04:52:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:52:44] c7-11-13.aglt2.org
[2025-06-05 04:52:44] apptainer works
[2025-06-05 04:52:44] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:52:44] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:52:44] Starting ATLAS job with PandaID=6680551936
[2025-06-05 04:52:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:13:59]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:13:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 06:13:59]  is_altstaged=None
[2025-06-05 06:13:59]  is_tar=False
[2025-06-05 06:13:59]  lfn=log.45006595._057078.job.log.tgz.1
[2025-06-05 06:13:59]  mtime=0
[2025-06-05 06:13:59]  protocol_id=None
[2025-06-05 06:13:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 06:13:59]  replicas=None
[2025-06-05 06:13:59]  scope=mc23_13p6TeV
[2025-06-05 06:13:59]  status=None
[2025-06-05 06:13:59]  status_code=0
[2025-06-05 06:13:59]  storage_token=
[2025-06-05 06:13:59]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6680551936/log.45006595._057078.job.log.tgz.1
[2025-06-05 06:13:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/e0/log.45006595._057078.job.log.tgz.1
[2025-06-05 06:13:59]  workdir=None
[2025-06-05 06:13:59] ]
[2025-06-05 06:13:59] 2025-06-05 10:13:35,334 | INFO     | transferring file log.45006595._057078.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6680551936/log.45006595._057078.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 06:13:59] 2025-06-05 10:13:35,334 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6680551936/log.45006595._057078.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._057078.job
[2025-06-05 06:13:59] 2025-06-05 10:13:35,352 | INFO     | adding to output.list: log.45006595._057078.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/e0/log.45006595._057078.job.log.tg
[2025-06-05 06:13:59] 2025-06-05 10:13:35,353 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 06:13:59] 2025-06-05 10:13:35,353 | INFO     | summary of transferred files:
[2025-06-05 06:13:59] 2025-06-05 10:13:35,353 | INFO     |  -- lfn=log.45006595._057078.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 06:13:59] 2025-06-05 10:13:35,354 | INFO     | stage-out finished correctly
[2025-06-05 06:13:59] 2025-06-05 10:13:35,429 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 06:13:59] 2025-06-05 10:13:35,502 | INFO     | job 6680551936 has state=finished
[2025-06-05 06:13:59] 2025-06-05 10:13:35,502 | INFO     | preparing for final server update for job 6680551936 in state='finished'
[2025-06-05 06:13:59] 2025-06-05 10:13:35,557 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-05 06:13:59] 2025-06-05 10:13:35,558 | INFO     | this job has now completed (state=finished)
[2025-06-05 06:13:59] 2025-06-05 10:13:35,558 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 06:13:59] 2025-06-05 10:13:35,558 | INFO     | log transfer has been attempted: DONE
[2025-06-05 06:13:59] 2025-06-05 10:13:35,558 | INFO     | job 6680551936 has finished - writing final server update
[2025-06-05 06:13:59] 2025-06-05 10:13:35,558 | INFO     | total number of processed events: 400 (read)
[2025-06-05 06:13:59] 2025-06-05 10:13:35,575 | INFO     | executing command: lscpu
[2025-06-05 06:13:59] 2025-06-05 10:13:35,661 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 06:13:59] 2025-06-05 10:13:35,879 | INFO     | monitor loop #353: job 0:6680551936 is in state 'finished'
[2025-06-05 06:13:59] 2025-06-05 10:13:35,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 06:13:59] 2025-06-05 10:13:38,384 | INFO     | monitor loop #354: job 0:6680551936 is in state 'finished'
[2025-06-05 06:13:59] 2025-06-05 10:13:38,384 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 06:13:59] 2025-06-05 10:13:39,682 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 06:13:59] 2025-06-05 10:13:39,683 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6680551936/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 06:13:59] 2025-06-05 10:13:39,684 | INFO     | extracted standard info from prmon json
[2025-06-05 06:13:59] 2025-06-05 10:13:39,684 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:13:59] 2025-06-05 10:13:39,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:13:59] 2025-06-05 10:13:39,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:13:59] 2025-06-05 10:13:39,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:13:59] 2025-06-05 10:13:39,687 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:13:59] 2025-06-05 10:13:39,687 | INFO     | sum of square deviations: 115718891.9861112
[2025-06-05 06:13:59] 2025-06-05 10:13:39,687 | INFO     | sum of deviations: -6019786129.180555
[2025-06-05 06:13:59] 2025-06-05 10:13:39,687 | INFO     | mean x: 1749116082.5138888
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | mean y: 2206677.6805555555
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | -- intersect: 90992576107.6565
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | intersect: 90992576107.6565
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | chi2: 0.07728919062007732
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | -- intersect: 90992576107.6565
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | current memory leak: -52.02 B/s (using 72 data points, chi2=0.08)
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | ..............................
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | . Timing measurements:
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | . get job = 0 s
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | . initial setup = 2 s
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | . payload setup = 10 s
[2025-06-05 06:13:59] 2025-06-05 10:13:39,688 | INFO     | . stage-in = 0 s
[2025-06-05 06:13:59] 2025-06-05 10:13:39,689 | INFO     | . payload execution = 4806 s
[2025-06-05 06:13:59] 2025-06-05 10:13:39,689 | INFO     | . stage-out = 0 s
[2025-06-05 06:13:59] 2025-06-05 10:13:39,689 | INFO     | . log creation = 0 s
[2025-06-05 06:13:59] 2025-06-05 10:13:39,689 | INFO     | ..............................
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | 
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | job summary report
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | --------------------------------------------------
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | PanDA job id: 6680551936
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | task id: 45006595
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | errors: (none)
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | pilot state: finished 
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | transexitcode: 0
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | exeerrorcode: 0
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | exeerrordiag: 
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | exitcode: 0
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | exitmsg: OK
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | cpuconsumptiontime: 28271 s
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | nevents: 400
[2025-06-05 06:13:59] 2025-06-05 10:13:39,746 | INFO     | neventsw: 0
[2025-06-05 06:13:59] 2025-06-05 10:13:39,747 | INFO     | pid: 2387132
[2025-06-05 06:13:59] 2025-06-05 10:13:39,747 | INFO     | pgrp: 2387132
[2025-06-05 06:13:59] 2025-06-05 10:13:39,747 | INFO     | corecount: 8
[2025-06-05 06:13:59] 2025-06-05 10:13:39,747 | INFO     | event service: False
[2025-06-05 06:13:59] 2025-06-05 10:13:39,747 | INFO     | sizes: {0: 2397175, 1: 2397317, 6: 2397523, 11: 2397551, 4820: 2432549, 4825: 2432663}
[2025-06-05 06:13:59] 2025-06-05 10:13:39,747 | INFO     | --------------------------------------------------
[2025-06-05 06:13:59] 2025-06-05 10:13:39,747 | INFO     | 
[2025-06-05 06:13:59] 2025-06-05 10:13:39,747 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 06:13:59] 2025-06-05 10:13:39,770 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,771 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,771 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,771 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,771 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,771 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:13:59] 2025-06-05 10:13:39,773 | INFO     | job 6680551936 has completed (purged errors)
[2025-06-05 06:13:59] 2025-06-05 10:13:39,773 | INFO     | overall cleanup function is called
[2025-06-05 06:13:59] 2025-06-05 10:13:40,781 | INFO     | --- collectZombieJob: --- 10, [2387132]
[2025-06-05 06:13:59] 2025-06-05 10:13:40,781 | INFO     | zombie collector waiting for pid 2387132
[2025-06-05 06:13:59] 2025-06-05 10:13:40,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:13:59] 2025-06-05 10:13:40,781 | INFO     | collected zombie processes
[2025-06-05 06:13:59] 2025-06-05 10:13:40,781 | INFO     | will attempt to kill all subprocesses of pid=2387132
[2025-06-05 06:13:59] 2025-06-05 10:13:41,016 | INFO     | process IDs to be killed: [2387132] (in reverse order)
[2025-06-05 06:13:59] 2025-06-05 10:13:41,128 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:13:59] 2025-06-05 10:13:41,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:13:59] 2025-06-05 10:13:41,142 | INFO     | did not find any defunct processes belonging to 2387132
[2025-06-05 06:13:59] 2025-06-05 10:13:41,153 | INFO     | did not find any defunct processes belonging to 2387132
[2025-06-05 06:13:59] 2025-06-05 10:13:41,154 | INFO     | ready for new job
[2025-06-05 06:13:59] 2025-06-05 10:13:41,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:13:59] 2025-06-05 10:13:41,155 | INFO     | **************************************
[2025-06-05 06:13:59] 2025-06-05 10:13:41,155 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:13:59] 2025-06-05 10:13:41,155 | INFO     | **************************************
[2025-06-05 06:13:59] 2025-06-05 10:13:41,155 | INFO     | 
[2025-06-05 06:13:59] 2025-06-05 10:13:41,171 | INFO     | architecture information:
[2025-06-05 06:13:59] 2025-06-05 10:13:41,172 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:13:59] 2025-06-05 10:13:41,190 | INFO     | cat /etc/os-release:
[2025-06-05 06:13:59] NAME="CentOS Linux"
[2025-06-05 06:13:59] VERSION="7 (Core)"
[2025-06-05 06:13:59] ID="centos"
[2025-06-05 06:13:59] ID_LIKE="rhel fedora"
[2025-06-05 06:13:59] VERSION_ID="7"
[2025-06-05 06:13:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:13:59] ANSI_COLOR="0;31"
[2025-06-05 06:13:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:13:59] HOME_URL="https://www.centos.org/"
[2025-06-05 06:13:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:13:59] 
[2025-06-05 06:13:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:13:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:13:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:13:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:13:59] 
[2025-06-05 06:13:59] 2025-06-05 10:13:41,190 | INFO     | **************************************
[2025-06-05 06:13:59] 2025-06-05 10:13:41,691 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 06:13:59] 2025-06-05 10:13:41,710 | INFO     | sufficient remaining disk space (96109330432 B)
[2025-06-05 06:13:59] 2025-06-05 10:13:41,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:13:59] 2025-06-05 10:13:41,710 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:13:59] 2025-06-05 10:13:41,710 | INFO     | update_server=False
[2025-06-05 06:13:59] 2025-06-05 10:13:41,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:13:59] 2025-06-05 10:13:41,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:13:59] 2025-06-05 10:13:41,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:13:59] 2025-06-05 10:13:41,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:13:59] 2025-06-05 10:13:41,730 | INFO     | all job control threads have been joined
[2025-06-05 06:13:59] 2025-06-05 10:13:41,798 | INFO     | PID=2368929 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 06:13:59] 2025-06-05 10:13:41,798 | INFO     | .. there are 12 such processes running
[2025-06-05 06:13:59] 2025-06-05 10:13:41,798 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:13:59] 2025-06-05 10:13:41,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:13:59] 2025-06-05 10:13:41,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:13:59] 2025-06-05 10:13:41,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:13:59] 2025-06-05 10:13:41,893 | INFO     | aborting loop
[2025-06-05 06:13:59] 2025-06-05 10:13:42,700 | INFO     | all data control threads have been joined
[2025-06-05 06:13:59] 2025-06-05 10:13:42,712 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:42,716 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:42,731 | INFO     | [job] control thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:42,752 | INFO     | [job] validate thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:42,871 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:42,899 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:42,909 | INFO     | all payload control threads have been joined
[2025-06-05 06:13:59] 2025-06-05 10:13:43,001 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:43,191 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:43,217 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:43,709 | INFO     | [data] control thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:43,717 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:43,776 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:43,776 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:43,914 | INFO     | [payload] control thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:45,718 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:52,113 | INFO     | job.realtimelogging is not enabled
[2025-06-05 06:13:59] 2025-06-05 10:13:53,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:13:59] 2025-06-05 10:13:53,872 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110128068416)>', '<ExcThread(monitor, started 140109399709440)>']
[2025-06-05 06:13:59] 2025-06-05 10:13:54,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:13:59] 2025-06-05 10:13:54,861 | INFO     | [monitor] control thread has ended
[2025-06-05 06:13:59] 2025-06-05 10:13:58,897 | INFO     | all workflow threads have been joined
[2025-06-05 06:13:59] 2025-06-05 10:13:58,897 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:13:59] 2025-06-05 10:13:58,897 | INFO     | traces error code: 0
[2025-06-05 06:13:59] 2025-06-05 10:13:58,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:13:59] 2025-06-05 10:13:59,022 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:13:59] 2025-06-05 10:13:59,025 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:13:59] 2025-06-05 10:13:59,026 [wrapper] pilotpid: 2368929
[2025-06-05 06:13:59] 2025-06-05 10:13:59,028 [wrapper] Pilot exit status: 0
[2025-06-05 06:13:59] 2025-06-05 10:13:59,036 [wrapper] pandaids: 6680551936
[2025-06-05 06:13:59] 2025-06-05 10:13:59,119 [wrapper] cleanup supervisor_pilot 2934701 2368930
[2025-06-05 06:13:59] 2025-06-05 10:13:59,122 [wrapper] Test setup, not cleaning
[2025-06-05 06:13:59] 2025-06-05 10:13:59,123 [wrapper] apfmon messages muted
[2025-06-05 06:13:59] 2025-06-05 10:13:59,125 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:13:59] 2025-06-05 10:13:59,127 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:13:59]  *** Error codes and diagnostics ***
[2025-06-05 06:13:59]     "exeErrorCode": 0,
[2025-06-05 06:13:59]     "exeErrorDiag": "",
[2025-06-05 06:13:59]     "pilotErrorCode": 0,
[2025-06-05 06:13:59]     "pilotErrorDiag": "",
[2025-06-05 06:13:59]  *** Listing of results directory ***
[2025-06-05 06:13:59] total 384088
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas    495897 Jun  5 04:45 pilot3.tar.gz
[2025-06-05 06:13:59] -rwx------. 1 boincer umatlas     37140 Jun  5 04:51 runpilot2-wrapper.sh
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas      5112 Jun  5 04:51 queuedata.json
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas       100 Jun  5 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:13:59] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 04:52 run_atlas
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas       105 Jun  5 04:52 job.xml
[2025-06-05 06:13:59] -rw-r--r--. 2 boincer umatlas 214470889 Jun  5 04:52 EVNT.45006593._002162.pool.root.1
[2025-06-05 06:13:59] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 04:52 start_atlas.sh
[2025-06-05 06:13:59] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 04:52 shared
[2025-06-05 06:13:59] -rw-r--r--. 2 boincer umatlas    508885 Jun  5 04:52 input.tar.gz
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas         0 Jun  5 04:52 boinc_lockfile
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas      2523 Jun  5 04:52 pandaJob.out
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas    983281 Jun  5 04:52 agis_schedconf.cvmfs.json
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas   1598969 Jun  5 04:52 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:13:59] drwx------. 4 boincer umatlas      4096 Jun  5 04:52 pilot3
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas      6897 Jun  5 06:09 init_data.xml
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas 173467599 Jun  5 06:13 HITS.45006595._057078.pool.root.1
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas       529 Jun  5 06:13 boinc_task_state.xml
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas      1035 Jun  5 06:13 memory_monitor_summary.json
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas    294140 Jun  5 06:13 log.45006595._057078.job.log.tgz.1
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas        95 Jun  5 06:13 pilot_heartbeat.json
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas      7692 Jun  5 06:13 heartbeat.json
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 06:13 boinc_mmap_file
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas        27 Jun  5 06:13 wrapper_checkpoint.txt
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas      4821 Jun  5 06:13 pilotlog.txt
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas    472945 Jun  5 06:13 log.45006595._057078.job.log.1
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas       357 Jun  5 06:13 output.list
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas       620 Jun  5 06:13 runtime_log
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas    788480 Jun  5 06:13 result.tar.gz
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas      8660 Jun  5 06:13 runtime_log.err
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas       652 Jun  5 06:13 LLEODmUVLh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN5nKDmMBiGmm.diag
[2025-06-05 06:13:59] -rw-r--r--. 1 boincer umatlas     21397 Jun  5 06:13 stderr.txt
[2025-06-05 06:13:59] HITS file was successfully produced:
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas 173467599 Jun  5 06:13 shared/HITS.pool.root.1
[2025-06-05 06:13:59]  *** Contents of shared directory: ***
[2025-06-05 06:13:59] total 380144
[2025-06-05 06:13:59] -rw-r--r--. 2 boincer umatlas 214470889 Jun  5 04:52 ATLAS.root_0
[2025-06-05 06:13:59] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 04:52 start_atlas.sh
[2025-06-05 06:13:59] -rw-r--r--. 2 boincer umatlas    508885 Jun  5 04:52 input.tar.gz
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas 173467599 Jun  5 06:13 HITS.pool.root.1
[2025-06-05 06:13:59] -rw-------. 1 boincer umatlas    788480 Jun  5 06:13 result.tar.gz
06:14:01 (2363063): run_atlas exited; CPU time 28311.373947
06:14:01 (2363063): called boinc_finish(0)

</stderr_txt>
]]>

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