Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:03:51 (1480): wrapper (7.7.26015): starting
16:03:51 (1480): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 16:03:51] Arguments: --nthreads 8
[2025-06-05 16:03:51] Threads: 8
[2025-06-05 16:03:51] Checking for CVMFS
[2025-06-05 16:03:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 16:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 16:03:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 16:03:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 16:03:53] 2.11.2.0 15360 34738 100992 146820 2 59 14569464 25165824 3135 130560 0 18147183 99.790 19512361 2159 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 16:03:53] CVMFS is ok
[2025-06-05 16:03:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:03:53] Checking for apptainer binary...
[2025-06-05 16:03:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 16:03:53] Running /usr/bin/apptainer --version
[2025-06-05 16:03:53] apptainer version 1.3.2-1.el7
[2025-06-05 16:03:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:34:18] cg-vwn250.simple-grid.lan
[2025-06-05 16:34:18] apptainer works
[2025-06-05 16:34:18] Set ATHENA_PROC_NUMBER=8
[2025-06-05 16:34:18] Set ATHENA_CORE_NUMBER=8
[2025-06-05 16:34:19] Starting ATLAS job with PandaID=6667885932
[2025-06-05 16:34:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 22:13:11]  *** The last 200 lines of the pilot log: ***
[2025-06-05 22:13:11] 2025-06-05 19:45:15,925 | INFO     | extracted standard info from prmon json
[2025-06-05 22:13:11] 2025-06-05 19:45:15,926 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 22:13:11] 2025-06-05 19:45:15,926 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 22:13:11] 2025-06-05 19:45:15,926 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 22:13:11] 2025-06-05 19:45:15,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 22:13:11] 2025-06-05 19:45:15,932 | INFO     | fitting pss+swap vs Time
[2025-06-05 22:13:11] 2025-06-05 19:45:15,933 | INFO     | sum of square deviations: 7799669962.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,936 | INFO     | sum of deviations: 126822529216.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,936 | INFO     | mean x: 1749143685.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,936 | INFO     | mean y: 2444403.0580204776
[2025-06-05 22:13:11] 2025-06-05 19:45:15,936 | INFO     | -- intersect: -28438608510.03374
[2025-06-05 22:13:11] 2025-06-05 19:45:15,936 | INFO     | intersect: -28438608510.03374
[2025-06-05 22:13:11] 2025-06-05 19:45:15,937 | INFO     | chi2: 7.361742336673913
[2025-06-05 22:13:11] 2025-06-05 19:45:15,938 | INFO     | sum of square deviations: 7407141672.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,940 | INFO     | sum of deviations: 143656757349.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,940 | INFO     | mean x: 1749143532.5
[2025-06-05 22:13:11] 2025-06-05 19:45:15,941 | INFO     | mean y: 2450838.5208333335
[2025-06-05 22:13:11] 2025-06-05 19:45:15,941 | INFO     | -- intersect: -33921065025.47076
[2025-06-05 22:13:11] 2025-06-05 19:45:15,941 | INFO     | intersect: -33921065025.47076
[2025-06-05 22:13:11] 2025-06-05 19:45:15,941 | INFO     | chi2: 6.644895738217994
[2025-06-05 22:13:11] 2025-06-05 19:45:15,941 | INFO     | current chi2=6.644895738217994 (change=9.73745841232193 %)
[2025-06-05 22:13:11] 2025-06-05 19:45:15,941 | INFO     | right removable region: 287
[2025-06-05 22:13:11] 2025-06-05 19:45:15,942 | INFO     | sum of square deviations: 7407141672.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,945 | INFO     | sum of deviations: 25013133509.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,945 | INFO     | mean x: 1749143837.5
[2025-06-05 22:13:11] 2025-06-05 19:45:15,945 | INFO     | mean y: 2483932.125
[2025-06-05 22:13:11] 2025-06-05 19:45:15,945 | INFO     | -- intersect: -5904189690.605743
[2025-06-05 22:13:11] 2025-06-05 19:45:15,945 | INFO     | intersect: -5904189690.605743
[2025-06-05 22:13:11] 2025-06-05 19:45:15,946 | INFO     | chi2: 2.5699427346725647
[2025-06-05 22:13:11] 2025-06-05 19:45:15,946 | INFO     | current chi2=2.5699427346725647 (change=65.09056392981987 %)
[2025-06-05 22:13:11] 2025-06-05 19:45:15,946 | INFO     | sum of square deviations: 7028008982.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,949 | INFO     | sum of deviations: -30951938325.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,949 | INFO     | mean x: 1749143990.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,949 | INFO     | mean y: 2506345.696113074
[2025-06-05 22:13:11] 2025-06-05 19:45:15,949 | INFO     | -- intersect: 7705882513.638582
[2025-06-05 22:13:11] 2025-06-05 19:45:15,950 | INFO     | intersect: 7705882513.638582
[2025-06-05 22:13:11] 2025-06-05 19:45:15,950 | INFO     | chi2: 0.9329793437106817
[2025-06-05 22:13:11] 2025-06-05 19:45:15,950 | INFO     | current chi2=0.9329793437106817 (change=63.696492878097054 %)
[2025-06-05 22:13:11] 2025-06-05 19:45:15,951 | INFO     | sum of square deviations: 6662039329.5
[2025-06-05 22:13:11] 2025-06-05 19:45:15,953 | INFO     | sum of deviations: -31782726757.5
[2025-06-05 22:13:11] 2025-06-05 19:45:15,953 | INFO     | mean x: 1749144142.5
[2025-06-05 22:13:11] 2025-06-05 19:45:15,953 | INFO     | mean y: 2506661.1474820143
[2025-06-05 22:13:11] 2025-06-05 19:45:15,953 | INFO     | -- intersect: 8347184257.749344
[2025-06-05 22:13:11] 2025-06-05 19:45:15,954 | INFO     | intersect: 8347184257.749344
[2025-06-05 22:13:11] 2025-06-05 19:45:15,954 | INFO     | chi2: 0.9065756459681985
[2025-06-05 22:13:11] 2025-06-05 19:45:15,954 | INFO     | current chi2=0.9065756459681985 (change=2.8300409779137636 %)
[2025-06-05 22:13:11] 2025-06-05 19:45:15,954 | INFO     | left removable region: 30
[2025-06-05 22:13:11] 2025-06-05 19:45:15,955 | INFO     | sum of square deviations: 5263458688.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,957 | INFO     | sum of deviations: 12796926358.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,957 | INFO     | mean x: 1749144417.0
[2025-06-05 22:13:11] 2025-06-05 19:45:15,957 | INFO     | mean y: 2502425.06614786
[2025-06-05 22:13:11] 2025-06-05 19:45:15,957 | INFO     | -- intersect: -4250152268.488814
[2025-06-05 22:13:11] 2025-06-05 19:45:15,957 | INFO     | intersect: -4250152268.488814
[2025-06-05 22:13:11] 2025-06-05 19:45:15,958 | INFO     | chi2: 0.0006543406659538329
[2025-06-05 22:13:11] 2025-06-05 19:45:15,958 | INFO     | -- intersect: -4250152268.488814
[2025-06-05 22:13:11] 2025-06-05 19:45:15,958 | INFO     | current memory leak: 2.43 B/s (using 257 data points, chi2=0.00)
[2025-06-05 22:13:11] 2025-06-05 19:45:15,961 | INFO     | ..............................
[2025-06-05 22:13:11] 2025-06-05 19:45:15,962 | INFO     | . Timing measurements:
[2025-06-05 22:13:11] 2025-06-05 19:45:15,962 | INFO     | . get job = 0 s
[2025-06-05 22:13:11] 2025-06-05 19:45:15,962 | INFO     | . initial setup = 5 s
[2025-06-05 22:13:11] 2025-06-05 19:45:15,962 | INFO     | . payload setup = 161 s
[2025-06-05 22:13:11] 2025-06-05 19:45:15,962 | INFO     | . stage-in = 0 s
[2025-06-05 22:13:11] 2025-06-05 19:45:15,962 | INFO     | . payload execution = 17995 s
[2025-06-05 22:13:11] 2025-06-05 19:45:15,962 | INFO     | . stage-out = 3 s
[2025-06-05 22:13:11] 2025-06-05 19:45:15,962 | INFO     | . log creation = 1 s
[2025-06-05 22:13:11] 2025-06-05 19:45:15,962 | INFO     | ..............................
[2025-06-05 22:13:11] 2025-06-05 19:45:16,094 | INFO     | 
[2025-06-05 22:13:11] 2025-06-05 19:45:16,094 | INFO     | job summary report
[2025-06-05 22:13:11] 2025-06-05 19:45:16,094 | INFO     | --------------------------------------------------
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | PanDA job id: 6667885932
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | task id: 44871837
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | errors: (none)
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | pilot state: finished 
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | transexitcode: 0
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | exeerrorcode: 0
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | exeerrordiag: 
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | exitcode: 0
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | exitmsg: OK
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | cpuconsumptiontime: 67868 s
[2025-06-05 22:13:11] 2025-06-05 19:45:16,095 | INFO     | nevents: 400
[2025-06-05 22:13:11] 2025-06-05 19:45:16,096 | INFO     | neventsw: 0
[2025-06-05 22:13:11] 2025-06-05 19:45:16,096 | INFO     | pid: 29530
[2025-06-05 22:13:11] 2025-06-05 19:45:16,096 | INFO     | pgrp: 29530
[2025-06-05 22:13:11] 2025-06-05 19:45:16,096 | INFO     | corecount: 8
[2025-06-05 22:13:11] 2025-06-05 19:45:16,096 | INFO     | event service: False
[2025-06-05 22:13:11] 2025-06-05 19:45:16,096 | INFO     | sizes: {0: 2396563, 1: 2397420, 2: 2397420, 12: 2397448, 23: 2397476, 34: 2397504, 44: 2397660, 55: 2397688, 66: 2397716, 77: 2397744, 87: 2397800, 95: 2398314, 98
[2025-06-05 22:13:11] 2025-06-05 19:45:16,096 | INFO     | --------------------------------------------------
[2025-06-05 22:13:11] 2025-06-05 19:45:16,096 | INFO     | 
[2025-06-05 22:13:11] 2025-06-05 19:45:16,096 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-05 22:13:11] 2025-06-05 19:45:16,590 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,591 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,592 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 22:13:11] 2025-06-05 19:45:16,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,592 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 22:13:11] 2025-06-05 19:45:16,592 | INFO     | job 6667885932 has completed (purged errors)
[2025-06-05 22:13:11] 2025-06-05 19:45:16,592 | INFO     | overall cleanup function is called
[2025-06-05 22:13:11] 2025-06-05 19:45:17,602 | INFO     | --- collectZombieJob: --- 10, [29530]
[2025-06-05 22:13:11] 2025-06-05 19:45:17,602 | INFO     | zombie collector waiting for pid 29530
[2025-06-05 22:13:11] 2025-06-05 19:45:17,602 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 22:13:11] 2025-06-05 19:45:17,603 | INFO     | collected zombie processes
[2025-06-05 22:13:11] 2025-06-05 19:45:17,603 | INFO     | will attempt to kill all subprocesses of pid=29530
[2025-06-05 22:13:11] 2025-06-05 19:45:17,731 | INFO     | process IDs to be killed: [29530] (in reverse order)
[2025-06-05 22:13:11] 2025-06-05 19:45:18,536 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 22:13:11] 2025-06-05 19:45:18,537 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 22:13:11] 2025-06-05 19:45:18,540 | INFO     | did not find any defunct processes belonging to 29530
[2025-06-05 22:13:11] 2025-06-05 19:45:18,544 | INFO     | did not find any defunct processes belonging to 29530
[2025-06-05 22:13:11] 2025-06-05 19:45:18,545 | INFO     | ready for new job
[2025-06-05 22:13:11] 2025-06-05 19:45:18,545 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 22:13:11] 2025-06-05 19:45:18,558 | INFO     | **************************************
[2025-06-05 22:13:11] 2025-06-05 19:45:18,558 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 22:13:11] 2025-06-05 19:45:18,558 | INFO     | **************************************
[2025-06-05 22:13:11] 2025-06-05 19:45:18,558 | INFO     | 
[2025-06-05 22:13:11] 2025-06-05 19:45:18,559 | INFO     | pilot is running in a VM
[2025-06-05 22:13:11] 2025-06-05 19:45:18,559 | INFO     | architecture information:
[2025-06-05 22:13:11] 2025-06-05 19:45:18,573 | INFO     | executing command: cat /etc/os-release
[2025-06-05 22:13:11] 2025-06-05 19:45:18,892 | INFO     | cat /etc/os-release:
[2025-06-05 22:13:11] NAME="CentOS Linux"
[2025-06-05 22:13:11] VERSION="7 (Core)"
[2025-06-05 22:13:11] ID="centos"
[2025-06-05 22:13:11] ID_LIKE="rhel fedora"
[2025-06-05 22:13:11] VERSION_ID="7"
[2025-06-05 22:13:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 22:13:11] ANSI_COLOR="0;31"
[2025-06-05 22:13:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 22:13:11] HOME_URL="https://www.centos.org/"
[2025-06-05 22:13:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 22:13:11] 
[2025-06-05 22:13:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 22:13:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 22:13:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 22:13:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 22:13:11] 
[2025-06-05 22:13:11] 2025-06-05 19:45:18,893 | INFO     | **************************************
[2025-06-05 22:13:11] 2025-06-05 19:45:19,397 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-05 22:13:11] 2025-06-05 19:45:19,658 | INFO     | sufficient remaining disk space (496778608640 B)
[2025-06-05 22:13:11] 2025-06-05 19:45:19,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 22:13:11] 2025-06-05 19:45:19,659 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 22:13:11] 2025-06-05 19:45:19,659 | INFO     | update_server=False
[2025-06-05 22:13:11] 2025-06-05 19:45:19,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 22:13:11] 2025-06-05 19:45:19,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 22:13:11] 2025-06-05 19:45:19,660 | INFO     | aborting loop
[2025-06-05 22:13:11] 2025-06-05 19:45:19,668 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 22:13:11] 2025-06-05 19:45:19,669 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 22:13:11] 2025-06-05 19:45:19,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 22:13:11] 2025-06-05 19:45:19,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 22:13:11] 2025-06-05 19:45:20,065 | INFO     | all data control threads have been joined
[2025-06-05 22:13:11] 2025-06-05 19:45:20,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 22:13:11] 2025-06-05 19:45:20,514 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 22:13:11] 2025-06-05 19:45:20,526 | INFO     | all payload control threads have been joined
[2025-06-05 22:13:11] 2025-06-05 19:45:20,665 | INFO     | [job] retrieve thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:20,666 | INFO     | [job] job monitor thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:20,693 | INFO     | [payload] validate_post thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:20,754 | INFO     | all job control threads have been joined
[2025-06-05 22:13:11] 2025-06-05 19:45:20,973 | INFO     | [payload] failed_post thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:21,002 | INFO     | [job] validate thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:21,071 | INFO     | [data] control thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:21,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 22:13:11] 2025-06-05 19:45:21,523 | INFO     | [data] copytool_in thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:21,532 | INFO     | [payload] control thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:21,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:21,760 | INFO     | [job] control thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:22,019 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:22,082 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:22,115 | INFO     | [job] queue monitor thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:22,162 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:22,522 | INFO     | [data] copytool_out thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:24,138 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 22:13:11] 2025-06-05 19:45:26,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045470472000)>', '<ExcThread(monitor, started 140045017130752)>']
[2025-06-05 22:13:11] 2025-06-05 19:45:26,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 22:13:11] 2025-06-05 19:45:26,710 | INFO     | [monitor] control thread has ended
[2025-06-05 22:13:11] 2025-06-05 19:45:31,129 | INFO     | all workflow threads have been joined
[2025-06-05 22:13:11] 2025-06-05 19:45:31,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 22:13:11] 2025-06-05 19:45:31,130 | INFO     | traces error code: 0
[2025-06-05 22:13:11] 2025-06-05 19:45:31,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 22:13:11] 2025-06-05 19:45:31,603 [wrapper] ==== pilot stdout END ====
[2025-06-05 22:13:11] 2025-06-05 19:45:31,669 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 22:13:11] 2025-06-05 19:45:31,729 [wrapper] pilotpid: 22391
[2025-06-05 22:13:11] 2025-06-05 19:45:31,851 [wrapper] Pilot exit status: 0
[2025-06-05 22:13:11] 2025-06-05 19:45:32,346 [wrapper] pandaids: 6667885932
[2025-06-05 22:13:11] 2025-06-05 19:45:33,204 [wrapper] cleanup supervisor_pilot 22994 22392
[2025-06-05 22:13:11] 2025-06-05 19:45:33,307 [wrapper] Test setup, not cleaning
[2025-06-05 22:13:11] 2025-06-05 19:45:33,429 [wrapper] apfmon messages muted
[2025-06-05 22:13:11] 2025-06-05 19:45:33,541 [wrapper] ==== wrapper stdout END ====
[2025-06-05 22:13:11] 2025-06-05 19:45:33,644 [wrapper] ==== wrapper stderr END ====
[2025-06-05 22:13:11]  *** Error codes and diagnostics ***
[2025-06-05 22:13:11]     "exeErrorCode": 0,
[2025-06-05 22:13:11]     "exeErrorDiag": "",
[2025-06-05 22:13:11]     "pilotErrorCode": 0,
[2025-06-05 22:13:11]     "pilotErrorDiag": "",
[2025-06-05 22:13:11]  *** Listing of results directory ***
[2025-06-05 22:13:11] total 418512
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc    495897 May 28 04:39 pilot3.tar.gz
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc      5111 May 28 04:50 queuedata.json
[2025-06-05 22:13:11] -rwx------. 1 boinc boinc     37140 May 28 04:54 runpilot2-wrapper.sh
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc       100 Jun  5 16:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 22:13:11] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 16:03 run_atlas
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc       105 Jun  5 16:03 job.xml
[2025-06-05 22:13:11] -rw-r--r--. 2 boinc boinc 225654650 Jun  5 16:03 EVNT.44871834._003039.pool.root.1
[2025-06-05 22:13:11] -rw-r--r--. 2 boinc boinc     15093 Jun  5 16:03 start_atlas.sh
[2025-06-05 22:13:11] drwxrwx--x. 2 boinc boinc        68 Jun  5 16:03 shared
[2025-06-05 22:13:11] -rw-r--r--. 2 boinc boinc    508879 Jun  5 16:03 input.tar.gz
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc      6393 Jun  5 16:03 init_data.xml
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc         0 Jun  5 16:03 boinc_lockfile
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc      2558 Jun  5 16:34 pandaJob.out
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc    983210 Jun  5 16:37 agis_schedconf.cvmfs.json
[2025-06-05 22:13:11] drwx------. 4 boinc boinc      4096 Jun  5 16:37 pilot3
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc 195124624 Jun  5 21:42 HITS.44871837._077667.pool.root.1
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc       531 Jun  5 21:42 boinc_task_state.xml
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc      1025 Jun  5 21:43 memory_monitor_summary.json
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc   1598969 Jun  5 21:43 agis_ddmendpoints.agis.ALL.json
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc    417929 Jun  5 21:43 log.44871837._077667.job.log.tgz.1
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc        95 Jun  5 21:45 pilot_heartbeat.json
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc      7691 Jun  5 21:45 heartbeat.json
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc      4540 Jun  5 21:45 pilotlog.txt
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc   1561894 Jun  5 21:45 log.44871837._077667.job.log.1
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc       357 Jun  5 21:45 output.list
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc       620 Jun  5 21:45 runtime_log
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc   1996800 Jun  5 21:45 result.tar.gz
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc       657 Jun  5 21:45 UHrKDmr6Le7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm64aKDmfde1Dm.diag
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc      8673 Jun  5 21:45 runtime_log.err
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc      8192 Jun  5 22:13 boinc_mmap_file
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc        28 Jun  5 22:13 wrapper_checkpoint.txt
[2025-06-05 22:13:11] -rw-r--r--. 1 boinc boinc     20490 Jun  5 22:13 stderr.txt
[2025-06-05 22:13:11] HITS file was successfully produced:
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc 195124624 Jun  5 21:42 shared/HITS.pool.root.1
[2025-06-05 22:13:11]  *** Contents of shared directory: ***
[2025-06-05 22:13:11] total 413388
[2025-06-05 22:13:11] -rw-r--r--. 2 boinc boinc 225654650 Jun  5 16:03 ATLAS.root_0
[2025-06-05 22:13:11] -rw-r--r--. 2 boinc boinc     15093 Jun  5 16:03 start_atlas.sh
[2025-06-05 22:13:11] -rw-r--r--. 2 boinc boinc    508879 Jun  5 16:03 input.tar.gz
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc 195124624 Jun  5 21:42 HITS.pool.root.1
[2025-06-05 22:13:11] -rw-------. 1 boinc boinc   1996800 Jun  5 21:45 result.tar.gz
22:13:13 (1480): run_atlas exited; CPU time 68119.678476
22:13:13 (1480): called boinc_finish(0)

</stderr_txt>
]]>

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