Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:48:04 (3000817): wrapper (7.7.26015): starting
04:48:04 (3000817): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:48:04] Arguments: --nthreads 8
[2025-06-05 04:48:04] Threads: 8
[2025-06-05 04:48:04] Checking for CVMFS
[2025-06-05 04:48:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:48:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:48:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:48:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:48:05] 2.12.6.0 8521 38528 516012 146812 1 238 27967063 40960001 24747 16776704 1 359398007 99.742 238893772 19154 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 04:48:05] CVMFS is ok
[2025-06-05 04:48:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:48:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:48:05] Further information can be found at the LHC@home message board.
[2025-06-05 04:48:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:48:05] Checking for apptainer binary...
[2025-06-05 04:48:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:48:05] Running /usr/bin/apptainer --version
[2025-06-05 04:48:05] apptainer version 1.4.1-1.el9
[2025-06-05 04:48:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:48:05] c7-4-30.aglt2.org
[2025-06-05 04:48:05] apptainer works
[2025-06-05 04:48:05] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:48:05] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:48:05] Starting ATLAS job with PandaID=6680546408
[2025-06-05 04:48:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:47:44 (3461345): wrapper (7.7.26015): starting
05:47:44 (3461345): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 05:47:44] Arguments: --nthreads 8
[2025-06-05 05:47:44] Threads: 8
[2025-06-05 05:47:44] This job has been restarted, cleaning up previous attempt
[2025-06-05 05:47:44] Checking for CVMFS
[2025-06-05 05:47:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:47:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:47:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:47:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:47:45] 2.12.6.0 8521 38588 531676 146814 1 675 29200767 40960001 24132 16776704 1 359623834 99.742 239419946 19162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 05:47:45] CVMFS is ok
[2025-06-05 05:47:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:47:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 05:47:45] Further information can be found at the LHC@home message board.
[2025-06-05 05:47:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:47:45] Checking for apptainer binary...
[2025-06-05 05:47:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:47:45] Running /usr/bin/apptainer --version
[2025-06-05 05:47:45] apptainer version 1.4.1-1.el9
[2025-06-05 05:47:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:47:45] c7-4-30.aglt2.org
[2025-06-05 05:47:45] apptainer works
[2025-06-05 05:47:45] Set ATHENA_PROC_NUMBER=8
[2025-06-05 05:47:45] Set ATHENA_CORE_NUMBER=8
[2025-06-05 05:47:45] Starting ATLAS job with PandaID=6680546408
[2025-06-05 05:47:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:29:27]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:29:27] 2025-06-05 12:29:12,451 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:29:27] 2025-06-05 12:29:12,452 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680546408/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:29:27] 2025-06-05 12:29:12,453 | INFO     | extracted standard info from prmon json
[2025-06-05 08:29:27] 2025-06-05 12:29:12,453 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:29:27] 2025-06-05 12:29:12,453 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:29:27] 2025-06-05 12:29:12,455 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:29:27] 2025-06-05 12:29:12,455 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:29:27] 2025-06-05 12:29:12,458 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:29:27] 2025-06-05 12:29:12,459 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 08:29:27] 2025-06-05 12:29:12,460 | INFO     | sum of deviations: 2420049278.9999986
[2025-06-05 08:29:27] 2025-06-05 12:29:12,460 | INFO     | mean x: 1749121707.5
[2025-06-05 08:29:27] 2025-06-05 12:29:12,460 | INFO     | mean y: 2189503.860759494
[2025-06-05 08:29:27] 2025-06-05 12:29:12,460 | INFO     | -- intersect: -3458892996.4454613
[2025-06-05 08:29:27] 2025-06-05 12:29:12,460 | INFO     | intersect: -3458892996.4454613
[2025-06-05 08:29:27] 2025-06-05 12:29:12,461 | INFO     | chi2: 1.4748031110749997
[2025-06-05 08:29:27] 2025-06-05 12:29:12,461 | INFO     | sum of square deviations: 1110539892.0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,462 | INFO     | sum of deviations: 1752687379.999996
[2025-06-05 08:29:27] 2025-06-05 12:29:12,463 | INFO     | mean x: 1749121555.0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,463 | INFO     | mean y: 2188585.1503267973
[2025-06-05 08:29:27] 2025-06-05 12:29:12,463 | INFO     | -- intersect: -2758327536.439359
[2025-06-05 08:29:27] 2025-06-05 12:29:12,463 | INFO     | intersect: -2758327536.439359
[2025-06-05 08:29:27] 2025-06-05 12:29:12,463 | INFO     | chi2: 1.4714960775847188
[2025-06-05 08:29:27] 2025-06-05 12:29:12,463 | INFO     | current chi2=1.4714960775847188 (change=0.22423559222562325 %)
[2025-06-05 08:29:27] 2025-06-05 12:29:12,464 | INFO     | right removable region: 152
[2025-06-05 08:29:27] 2025-06-05 12:29:12,464 | INFO     | sum of square deviations: 1110539892.0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,465 | INFO     | sum of deviations: -16049614595.999996
[2025-06-05 08:29:27] 2025-06-05 12:29:12,465 | INFO     | mean x: 1749121860.0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,465 | INFO     | mean y: 2214148.633986928
[2025-06-05 08:29:27] 2025-06-05 12:29:12,465 | INFO     | -- intersect: 25280668292.12428
[2025-06-05 08:29:27] 2025-06-05 12:29:12,465 | INFO     | intersect: 25280668292.12428
[2025-06-05 08:29:27] 2025-06-05 12:29:12,465 | INFO     | chi2: 0.17274580463896785
[2025-06-05 08:29:27] 2025-06-05 12:29:12,465 | INFO     | current chi2=0.17274580463896785 (change=88.28685650703221 %)
[2025-06-05 08:29:27] 2025-06-05 12:29:12,466 | INFO     | sum of square deviations: 1005179777.0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,466 | INFO     | sum of deviations: -8726476694.999998
[2025-06-05 08:29:27] 2025-06-05 12:29:12,466 | INFO     | mean x: 1749122012.5
[2025-06-05 08:29:27] 2025-06-05 12:29:12,467 | INFO     | mean y: 2203527.9324324327
[2025-06-05 08:29:27] 2025-06-05 12:29:12,467 | INFO     | -- intersect: 15187221002.46599
[2025-06-05 08:29:27] 2025-06-05 12:29:12,467 | INFO     | intersect: 15187221002.46599
[2025-06-05 08:29:27] 2025-06-05 12:29:12,469 | INFO     | chi2: 0.10334672429908637
[2025-06-05 08:29:27] 2025-06-05 12:29:12,469 | INFO     | current chi2=0.10334672429908637 (change=40.174104653321635 %)
[2025-06-05 08:29:27] 2025-06-05 12:29:12,470 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,470 | INFO     | sum of deviations: -5448233422.000002
[2025-06-05 08:29:27] 2025-06-05 12:29:12,470 | INFO     | mean x: 1749122165.0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,470 | INFO     | mean y: 2198500.5524475523
[2025-06-05 08:29:27] 2025-06-05 12:29:12,471 | INFO     | -- intersect: 10512388118.648912
[2025-06-05 08:29:27] 2025-06-05 12:29:12,471 | INFO     | intersect: 10512388118.648912
[2025-06-05 08:29:27] 2025-06-05 12:29:12,471 | INFO     | chi2: 0.0845280146998717
[2025-06-05 08:29:27] 2025-06-05 12:29:12,471 | INFO     | current chi2=0.0845280146998717 (change=18.209294708512626 %)
[2025-06-05 08:29:27] 2025-06-05 12:29:12,471 | INFO     | left removable region: 30
[2025-06-05 08:29:27] 2025-06-05 12:29:12,471 | INFO     | sum of square deviations: 563026370.5
[2025-06-05 08:29:27] 2025-06-05 12:29:12,472 | INFO     | sum of deviations: -818444258.9999986
[2025-06-05 08:29:27] 2025-06-05 12:29:12,472 | INFO     | mean x: 1749122439.5
[2025-06-05 08:29:27] 2025-06-05 12:29:12,472 | INFO     | mean y: 2187685.0327868853
[2025-06-05 08:29:27] 2025-06-05 12:29:12,472 | INFO     | -- intersect: 2544802549.813525
[2025-06-05 08:29:27] 2025-06-05 12:29:12,472 | INFO     | intersect: 2544802549.813525
[2025-06-05 08:29:27] 2025-06-05 12:29:12,472 | INFO     | chi2: 0.04791939015227
[2025-06-05 08:29:27] 2025-06-05 12:29:12,472 | INFO     | -- intersect: 2544802549.813525
[2025-06-05 08:29:27] 2025-06-05 12:29:12,473 | INFO     | current memory leak: -1.45 B/s (using 122 data points, chi2=0.05)
[2025-06-05 08:29:27] 2025-06-05 12:29:12,478 | INFO     | ..............................
[2025-06-05 08:29:27] 2025-06-05 12:29:12,478 | INFO     | . Timing measurements:
[2025-06-05 08:29:27] 2025-06-05 12:29:12,479 | INFO     | . get job = 0 s
[2025-06-05 08:29:27] 2025-06-05 12:29:12,479 | INFO     | . initial setup = 1 s
[2025-06-05 08:29:27] 2025-06-05 12:29:12,479 | INFO     | . payload setup = 12 s
[2025-06-05 08:29:27] 2025-06-05 12:29:12,479 | INFO     | . stage-in = 0 s
[2025-06-05 08:29:27] 2025-06-05 12:29:12,479 | INFO     | . payload execution = 9624 s
[2025-06-05 08:29:27] 2025-06-05 12:29:12,479 | INFO     | . stage-out = 2 s
[2025-06-05 08:29:27] 2025-06-05 12:29:12,479 | INFO     | . log creation = 0 s
[2025-06-05 08:29:27] 2025-06-05 12:29:12,479 | INFO     | ..............................
[2025-06-05 08:29:27] 2025-06-05 12:29:12,642 | INFO     | 
[2025-06-05 08:29:27] 2025-06-05 12:29:12,643 | INFO     | job summary report
[2025-06-05 08:29:27] 2025-06-05 12:29:12,643 | INFO     | --------------------------------------------------
[2025-06-05 08:29:27] 2025-06-05 12:29:12,645 | INFO     | PanDA job id: 6680546408
[2025-06-05 08:29:27] 2025-06-05 12:29:12,645 | INFO     | task id: 44871837
[2025-06-05 08:29:27] 2025-06-05 12:29:12,645 | INFO     | errors: (none)
[2025-06-05 08:29:27] 2025-06-05 12:29:12,645 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:29:27] 2025-06-05 12:29:12,645 | INFO     | pilot state: finished 
[2025-06-05 08:29:27] 2025-06-05 12:29:12,645 | INFO     | transexitcode: 0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,646 | INFO     | exeerrorcode: 0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,648 | INFO     | exeerrordiag: 
[2025-06-05 08:29:27] 2025-06-05 12:29:12,648 | INFO     | exitcode: 0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,648 | INFO     | exitmsg: OK
[2025-06-05 08:29:27] 2025-06-05 12:29:12,648 | INFO     | cpuconsumptiontime: 40210 s
[2025-06-05 08:29:27] 2025-06-05 12:29:12,648 | INFO     | nevents: 400
[2025-06-05 08:29:27] 2025-06-05 12:29:12,648 | INFO     | neventsw: 0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,651 | INFO     | pid: 3471484
[2025-06-05 08:29:27] 2025-06-05 12:29:12,651 | INFO     | pgrp: 3471484
[2025-06-05 08:29:27] 2025-06-05 12:29:12,651 | INFO     | corecount: 8
[2025-06-05 08:29:27] 2025-06-05 12:29:12,651 | INFO     | event service: False
[2025-06-05 08:29:27] 2025-06-05 12:29:12,651 | INFO     | sizes: {0: 2397339, 1: 2397339, 6: 2397573, 11: 2397601, 9641: 2425891, 9642: 2425890, 9644: 2435015, 9645: 2435099, 9655: 2435269}
[2025-06-05 08:29:27] 2025-06-05 12:29:12,654 | INFO     | --------------------------------------------------
[2025-06-05 08:29:27] 2025-06-05 12:29:12,654 | INFO     | 
[2025-06-05 08:29:27] 2025-06-05 12:29:12,654 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 08:29:27] 2025-06-05 12:29:12,695 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:29:27] 2025-06-05 12:29:12,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:29:27] 2025-06-05 12:29:12,697 | INFO     | job 6680546408 has completed (purged errors)
[2025-06-05 08:29:27] 2025-06-05 12:29:12,697 | INFO     | overall cleanup function is called
[2025-06-05 08:29:27] 2025-06-05 12:29:13,705 | INFO     | --- collectZombieJob: --- 10, [3471484]
[2025-06-05 08:29:27] 2025-06-05 12:29:13,705 | INFO     | zombie collector waiting for pid 3471484
[2025-06-05 08:29:27] 2025-06-05 12:29:13,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:29:27] 2025-06-05 12:29:13,705 | INFO     | collected zombie processes
[2025-06-05 08:29:27] 2025-06-05 12:29:13,705 | INFO     | will attempt to kill all subprocesses of pid=3471484
[2025-06-05 08:29:27] 2025-06-05 12:29:14,187 | INFO     | process IDs to be killed: [3471484] (in reverse order)
[2025-06-05 08:29:27] 2025-06-05 12:29:14,336 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:29:27] 2025-06-05 12:29:14,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:29:27] 2025-06-05 12:29:14,351 | INFO     | did not find any defunct processes belonging to 3471484
[2025-06-05 08:29:27] 2025-06-05 12:29:14,366 | INFO     | did not find any defunct processes belonging to 3471484
[2025-06-05 08:29:27] 2025-06-05 12:29:14,366 | INFO     | ready for new job
[2025-06-05 08:29:27] 2025-06-05 12:29:14,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:29:27] 2025-06-05 12:29:14,369 | INFO     | **************************************
[2025-06-05 08:29:27] 2025-06-05 12:29:14,370 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:29:27] 2025-06-05 12:29:14,370 | INFO     | **************************************
[2025-06-05 08:29:27] 2025-06-05 12:29:14,370 | INFO     | 
[2025-06-05 08:29:27] 2025-06-05 12:29:14,391 | INFO     | architecture information:
[2025-06-05 08:29:27] 2025-06-05 12:29:14,393 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:29:27] 2025-06-05 12:29:14,420 | INFO     | cat /etc/os-release:
[2025-06-05 08:29:27] NAME="CentOS Linux"
[2025-06-05 08:29:27] VERSION="7 (Core)"
[2025-06-05 08:29:27] ID="centos"
[2025-06-05 08:29:27] ID_LIKE="rhel fedora"
[2025-06-05 08:29:27] VERSION_ID="7"
[2025-06-05 08:29:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:29:27] ANSI_COLOR="0;31"
[2025-06-05 08:29:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:29:27] HOME_URL="https://www.centos.org/"
[2025-06-05 08:29:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:29:27] 
[2025-06-05 08:29:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:29:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:29:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:29:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:29:27] 
[2025-06-05 08:29:27] 2025-06-05 12:29:14,420 | INFO     | **************************************
[2025-06-05 08:29:27] 2025-06-05 12:29:14,924 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 08:29:27] 2025-06-05 12:29:14,956 | INFO     | sufficient remaining disk space (129837826048 B)
[2025-06-05 08:29:27] 2025-06-05 12:29:14,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:29:27] 2025-06-05 12:29:14,956 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:29:27] 2025-06-05 12:29:14,956 | INFO     | update_server=False
[2025-06-05 08:29:27] 2025-06-05 12:29:14,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:29:27] 2025-06-05 12:29:14,957 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:29:27] 2025-06-05 12:29:14,957 | INFO     | aborting loop
[2025-06-05 08:29:27] 2025-06-05 12:29:15,226 | INFO     | all payload control threads have been joined
[2025-06-05 08:29:27] 2025-06-05 12:29:15,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:29:27] 2025-06-05 12:29:15,410 | INFO     | all data control threads have been joined
[2025-06-05 08:29:27] 2025-06-05 12:29:15,890 | INFO     | all job control threads have been joined
[2025-06-05 08:29:27] 2025-06-05 12:29:15,896 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:29:27] 2025-06-05 12:29:15,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:29:27] 2025-06-05 12:29:15,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:29:27] 2025-06-05 12:29:15,962 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:15,963 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:16,075 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:16,075 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:16,232 | INFO     | [payload] control thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:16,416 | INFO     | [data] control thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:16,633 | INFO     | [job] validate thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:16,659 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:16,821 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:16,821 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:16,897 | INFO     | [job] control thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:17,359 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:17,389 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:17,444 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:17,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:29:27] 2025-06-05 12:29:18,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:29:27] 2025-06-05 12:29:18,662 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:22,055 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:29:27] 2025-06-05 12:29:22,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140316741207872)>', '<ExcThread(monitor, started 140315969185536)>']
[2025-06-05 08:29:27] 2025-06-05 12:29:22,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:29:27] 2025-06-05 12:29:22,937 | INFO     | [monitor] control thread has ended
[2025-06-05 08:29:27] 2025-06-05 12:29:27,142 | INFO     | all workflow threads have been joined
[2025-06-05 08:29:27] 2025-06-05 12:29:27,146 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:29:27] 2025-06-05 12:29:27,146 | INFO     | traces error code: 0
[2025-06-05 08:29:27] 2025-06-05 12:29:27,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:29:27] 2025-06-05 12:29:27,285 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:29:27] 2025-06-05 12:29:27,288 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:29:27] 2025-06-05 12:29:27,291 [wrapper] pilotpid: 3464929
[2025-06-05 08:29:27] 2025-06-05 12:29:27,293 [wrapper] Pilot exit status: 0
[2025-06-05 08:29:27] 2025-06-05 12:29:27,309 [wrapper] pandaids: 6680546408 6680546408
[2025-06-05 08:29:27] 2025-06-05 12:29:27,410 [wrapper] cleanup supervisor_pilot  504680 3464930
[2025-06-05 08:29:27] 2025-06-05 12:29:27,413 [wrapper] Test setup, not cleaning
[2025-06-05 08:29:27] 2025-06-05 12:29:27,416 [wrapper] apfmon messages muted
[2025-06-05 08:29:27] 2025-06-05 12:29:27,419 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:29:27] 2025-06-05 12:29:27,422 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:29:27]  *** Error codes and diagnostics ***
[2025-06-05 08:29:27]     "exeErrorCode": 0,
[2025-06-05 08:29:27]     "exeErrorDiag": "",
[2025-06-05 08:29:27]     "pilotErrorCode": 0,
[2025-06-05 08:29:27]     "pilotErrorDiag": "",
[2025-06-05 08:29:27]  *** Listing of results directory ***
[2025-06-05 08:29:27] total 633936
[2025-06-05 08:29:27] drwx------. 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas      5112 Jun  5 04:45 queuedata.json
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas    495897 Jun  5 04:45 pilot3.tar.gz
[2025-06-05 08:29:27] -rwx------. 1 boincer umatlas     37140 Jun  5 04:47 runpilot2-wrapper.sh
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas       100 Jun  5 04:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:29:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 04:48 run_atlas
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas       105 Jun  5 04:48 job.xml
[2025-06-05 08:29:27] -rw-r--r--. 3 boincer umatlas 225075827 Jun  5 04:48 EVNT.44871834._002821.pool.root.1
[2025-06-05 08:29:27] -rw-r--r--. 3 boincer umatlas 225075827 Jun  5 04:48 ATLAS.root_0
[2025-06-05 08:29:27] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 04:48 shared
[2025-06-05 08:29:27] -rw-r--r--. 2 boincer umatlas    508885 Jun  5 04:48 input.tar.gz
[2025-06-05 08:29:27] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 04:48 start_atlas.sh
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas         0 Jun  5 04:48 boinc_lockfile
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas      2557 Jun  5 05:47 pandaJob.out
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas    983289 Jun  5 05:47 agis_schedconf.cvmfs.json
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas      6936 Jun  5 08:27 init_data.xml
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas 192726358 Jun  5 08:28 HITS.44871837._102288.pool.root.1
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas       531 Jun  5 08:28 boinc_task_state.xml
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas        96 Jun  5 08:28 pilot_heartbeat.json
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas      1044 Jun  5 08:28 memory_monitor_summary.json
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas   1598969 Jun  5 08:29 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas    339387 Jun  5 08:29 log.44871837._102288.job.log.tgz.1
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas      7721 Jun  5 08:29 heartbeat.json
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas        28 Jun  5 08:29 wrapper_checkpoint.txt
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 08:29 boinc_mmap_file
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas      4354 Jun  5 08:29 pilotlog.txt
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas    879719 Jun  5 08:29 log.44871837._102288.job.log.1
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas       357 Jun  5 08:29 output.list
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas       620 Jun  5 08:29 runtime_log
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas   1239040 Jun  5 08:29 result.tar.gz
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas      8740 Jun  5 08:29 runtime_log.err
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas       782 Jun  5 08:29 8dzKDmKRLh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmM5nKDms8JPYn.diag
[2025-06-05 08:29:27] -rw-r--r--. 1 boincer umatlas     23011 Jun  5 08:29 stderr.txt
[2025-06-05 08:29:27] HITS file was successfully produced:
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas 192726358 Jun  5 08:28 shared/HITS.pool.root.1
[2025-06-05 08:29:27]  *** Contents of shared directory: ***
[2025-06-05 08:29:27] total 409748
[2025-06-05 08:29:27] -rw-r--r--. 3 boincer umatlas 225075827 Jun  5 04:48 ATLAS.root_0
[2025-06-05 08:29:27] -rw-r--r--. 2 boincer umatlas    508885 Jun  5 04:48 input.tar.gz
[2025-06-05 08:29:27] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 04:48 start_atlas.sh
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas 192726358 Jun  5 08:28 HITS.pool.root.1
[2025-06-05 08:29:27] -rw-------. 1 boincer umatlas   1239040 Jun  5 08:29 result.tar.gz
08:29:29 (3461345): run_atlas exited; CPU time 40511.710216
08:29:29 (3461345): called boinc_finish(0)

</stderr_txt>
]]>

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