Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:47:29 (2352328): wrapper (7.7.26015): starting
04:47:29 (2352328): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:47:29] Arguments: --nthreads 8
[2025-06-05 04:47:29] Threads: 8
[2025-06-05 04:47:29] Checking for CVMFS
[2025-06-05 04:47:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:47:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:47:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:47:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:47:30] 2.12.6.0 9858 32622 573344 146812 3 523 20593363 32935937 22652 16776704 1 148085236 99.679 126170560 23854 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 04:47:30] CVMFS is ok
[2025-06-05 04:47:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:47:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:47:30] Further information can be found at the LHC@home message board.
[2025-06-05 04:47:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:47:30] Checking for apptainer binary...
[2025-06-05 04:47:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:47:30] Running /usr/bin/apptainer --version
[2025-06-05 04:47:30] apptainer version 1.4.1-1.el9
[2025-06-05 04:47:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:47:30] c6-2-11-2.aglt2.org
[2025-06-05 04:47:30] apptainer works
[2025-06-05 04:47:30] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:47:30] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:47:30] Starting ATLAS job with PandaID=6667885164
[2025-06-05 04:47:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:13:29]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:13:29] 2025-06-05 11:13:07,895 | INFO     | -- intersect: 4242774389.224512
[2025-06-05 07:13:29] 2025-06-05 11:13:07,895 | INFO     | intersect: 4242774389.224512
[2025-06-05 07:13:29] 2025-06-05 11:13:07,895 | INFO     | chi2: 2.5352425691624694
[2025-06-05 07:13:29] 2025-06-05 11:13:07,896 | INFO     | sum of square deviations: 797272442.9343061
[2025-06-05 07:13:29] 2025-06-05 11:13:07,896 | INFO     | sum of deviations: 5952568271.693433
[2025-06-05 07:13:29] 2025-06-05 11:13:07,896 | INFO     | mean x: 1749117511.0218978
[2025-06-05 07:13:29] 2025-06-05 11:13:07,896 | INFO     | mean y: 2197667.102189781
[2025-06-05 07:13:29] 2025-06-05 11:13:07,896 | INFO     | -- intersect: -13057003728.662401
[2025-06-05 07:13:29] 2025-06-05 11:13:07,897 | INFO     | intersect: -13057003728.662401
[2025-06-05 07:13:29] 2025-06-05 11:13:07,897 | INFO     | chi2: 1.8994470406872097
[2025-06-05 07:13:29] 2025-06-05 11:13:07,897 | INFO     | current chi2=1.8994470406872097 (change=25.078291766191747 %)
[2025-06-05 07:13:29] 2025-06-05 11:13:07,897 | INFO     | sum of square deviations: 713122942.9318188
[2025-06-05 07:13:29] 2025-06-05 11:13:07,898 | INFO     | sum of deviations: 5041616397.977271
[2025-06-05 07:13:29] 2025-06-05 11:13:07,898 | INFO     | mean x: 1749117358.5227273
[2025-06-05 07:13:29] 2025-06-05 11:13:07,898 | INFO     | mean y: 2196015.507575758
[2025-06-05 07:13:29] 2025-06-05 11:13:07,898 | INFO     | -- intersect: -12363664379.420134
[2025-06-05 07:13:29] 2025-06-05 11:13:07,898 | INFO     | intersect: -12363664379.420134
[2025-06-05 07:13:29] 2025-06-05 11:13:07,898 | INFO     | chi2: 1.897418761950698
[2025-06-05 07:13:29] 2025-06-05 11:13:07,898 | INFO     | current chi2=1.897418761950698 (change=0.10678258951499749 %)
[2025-06-05 07:13:29] 2025-06-05 11:13:07,898 | INFO     | right removable region: 131
[2025-06-05 07:13:29] 2025-06-05 11:13:07,899 | INFO     | sum of square deviations: 797270612.9343061
[2025-06-05 07:13:29] 2025-06-05 11:13:07,899 | INFO     | sum of deviations: -21453793006.401455
[2025-06-05 07:13:29] 2025-06-05 11:13:07,899 | INFO     | mean x: 1749117816.0218978
[2025-06-05 07:13:29] 2025-06-05 11:13:07,900 | INFO     | mean y: 2216396.4671532847
[2025-06-05 07:13:29] 2025-06-05 11:13:07,900 | INFO     | -- intersect: 47069311257.311844
[2025-06-05 07:13:29] 2025-06-05 11:13:07,900 | INFO     | intersect: 47069311257.311844
[2025-06-05 07:13:29] 2025-06-05 11:13:07,900 | INFO     | chi2: 1.012177993318589
[2025-06-05 07:13:29] 2025-06-05 11:13:07,900 | INFO     | current chi2=1.012177993318589 (change=60.07569430908667 %)
[2025-06-05 07:13:29] 2025-06-05 11:13:07,900 | INFO     | sum of square deviations: 713127516.9697001
[2025-06-05 07:13:29] 2025-06-05 11:13:07,901 | INFO     | sum of deviations: -19397852829.424232
[2025-06-05 07:13:29] 2025-06-05 11:13:07,901 | INFO     | mean x: 1749117968.5151515
[2025-06-05 07:13:29] 2025-06-05 11:13:07,901 | INFO     | mean y: 2212557.462121212
[2025-06-05 07:13:29] 2025-06-05 11:13:07,901 | INFO     | -- intersect: 47580145153.21134
[2025-06-05 07:13:29] 2025-06-05 11:13:07,901 | INFO     | intersect: 47580145153.21134
[2025-06-05 07:13:29] 2025-06-05 11:13:07,901 | INFO     | chi2: 0.9812654078651759
[2025-06-05 07:13:29] 2025-06-05 11:13:07,902 | INFO     | current chi2=0.9812654078651759 (change=3.0540661481940767 %)
[2025-06-05 07:13:29] 2025-06-05 11:13:07,902 | INFO     | left removable region: 20
[2025-06-05 07:13:29] 2025-06-05 11:13:07,902 | INFO     | sum of square deviations: 424031985.96396345
[2025-06-05 07:13:29] 2025-06-05 11:13:07,902 | INFO     | sum of deviations: -471354514.79279184
[2025-06-05 07:13:29] 2025-06-05 11:13:07,902 | INFO     | mean x: 1749117938.018018
[2025-06-05 07:13:29] 2025-06-05 11:13:07,903 | INFO     | mean y: 2199818.396396396
[2025-06-05 07:13:29] 2025-06-05 11:13:07,903 | INFO     | -- intersect: 1946521624.9591637
[2025-06-05 07:13:29] 2025-06-05 11:13:07,903 | INFO     | intersect: 1946521624.9591637
[2025-06-05 07:13:29] 2025-06-05 11:13:07,903 | INFO     | chi2: 0.15895842919290562
[2025-06-05 07:13:29] 2025-06-05 11:13:07,903 | INFO     | -- intersect: 1946521624.9591637
[2025-06-05 07:13:29] 2025-06-05 11:13:07,903 | INFO     | current memory leak: -1.11 B/s (using 111 data points, chi2=0.16)
[2025-06-05 07:13:29] 2025-06-05 11:13:07,904 | INFO     | ..............................
[2025-06-05 07:13:29] 2025-06-05 11:13:07,904 | INFO     | . Timing measurements:
[2025-06-05 07:13:29] 2025-06-05 11:13:07,904 | INFO     | . get job = 0 s
[2025-06-05 07:13:29] 2025-06-05 11:13:07,904 | INFO     | . initial setup = 3 s
[2025-06-05 07:13:29] 2025-06-05 11:13:07,904 | INFO     | . payload setup = 21 s
[2025-06-05 07:13:29] 2025-06-05 11:13:07,904 | INFO     | . stage-in = 0 s
[2025-06-05 07:13:29] 2025-06-05 11:13:07,904 | INFO     | . payload execution = 8617 s
[2025-06-05 07:13:29] 2025-06-05 11:13:07,904 | INFO     | . stage-out = 1 s
[2025-06-05 07:13:29] 2025-06-05 11:13:07,904 | INFO     | . log creation = 0 s
[2025-06-05 07:13:29] 2025-06-05 11:13:07,904 | INFO     | ..............................
[2025-06-05 07:13:29] 2025-06-05 11:13:07,975 | INFO     | sufficient remaining disk space (96227819520 B)
[2025-06-05 07:13:29] 2025-06-05 11:13:07,976 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 07:13:29] 2025-06-05 11:13:07,977 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6667885164: 3343988 B (within 2537553920 B limit)
[2025-06-05 07:13:29] 2025-06-05 11:13:07,977 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6667885164/HITS.44871837._077288.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 07:13:29] 2025-06-05 11:13:07,977 | INFO     | total size of present files: 0 B (workdir size: 3343988 B)
[2025-06-05 07:13:29] 2025-06-05 11:13:07,977 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6667885164/HITS.44871837._077288.pool.root.1 since it does not exist
[2025-06-05 07:13:29] 2025-06-05 11:13:08,328 | INFO     | 
[2025-06-05 07:13:29] 2025-06-05 11:13:08,328 | INFO     | job summary report
[2025-06-05 07:13:29] 2025-06-05 11:13:08,328 | INFO     | --------------------------------------------------
[2025-06-05 07:13:29] 2025-06-05 11:13:08,328 | INFO     | PanDA job id: 6667885164
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | task id: 44871837
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | errors: (none)
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | pilot state: finished 
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | transexitcode: 0
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | exeerrorcode: 0
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | exeerrordiag: 
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | exitcode: 0
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | exitmsg: OK
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | cpuconsumptiontime: 52380 s
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | nevents: 400
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | neventsw: 0
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | pid: 2365595
[2025-06-05 07:13:29] 2025-06-05 11:13:08,329 | INFO     | pgrp: 2365595
[2025-06-05 07:13:29] 2025-06-05 11:13:08,330 | INFO     | corecount: 8
[2025-06-05 07:13:29] 2025-06-05 11:13:08,330 | INFO     | event service: False
[2025-06-05 07:13:29] 2025-06-05 11:13:08,330 | INFO     | sizes: {0: 2397220, 1: 2397419, 12: 2397419, 18: 2397653, 23: 2397681, 8642: 2425549, 8644: 2434546, 8661: 2434688}
[2025-06-05 07:13:29] 2025-06-05 11:13:08,330 | INFO     | --------------------------------------------------
[2025-06-05 07:13:29] 2025-06-05 11:13:08,330 | INFO     | 
[2025-06-05 07:13:29] 2025-06-05 11:13:08,330 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 07:13:29] 2025-06-05 11:13:08,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:13:29] 2025-06-05 11:13:08,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,414 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:13:29] 2025-06-05 11:13:08,414 | INFO     | job 6667885164 has completed (purged errors)
[2025-06-05 07:13:29] 2025-06-05 11:13:08,414 | INFO     | overall cleanup function is called
[2025-06-05 07:13:29] 2025-06-05 11:13:08,527 | INFO     | number of running child processes to parent process 2365595: 1
[2025-06-05 07:13:29] 2025-06-05 11:13:08,527 | INFO     | maximum number of monitored processes: 6
[2025-06-05 07:13:29] 2025-06-05 11:13:08,527 | INFO     | aborting job monitoring since job object (job id=6667885164) has expired
[2025-06-05 07:13:29] 2025-06-05 11:13:09,433 | INFO     | --- collectZombieJob: --- 10, [2365595]
[2025-06-05 07:13:29] 2025-06-05 11:13:09,434 | INFO     | zombie collector waiting for pid 2365595
[2025-06-05 07:13:29] 2025-06-05 11:13:09,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:13:29] 2025-06-05 11:13:09,435 | INFO     | collected zombie processes
[2025-06-05 07:13:29] 2025-06-05 11:13:09,435 | INFO     | will attempt to kill all subprocesses of pid=2365595
[2025-06-05 07:13:29] 2025-06-05 11:13:09,962 | INFO     | process IDs to be killed: [2365595] (in reverse order)
[2025-06-05 07:13:29] 2025-06-05 11:13:10,081 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:13:29] 2025-06-05 11:13:10,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:13:29] 2025-06-05 11:13:10,110 | INFO     | did not find any defunct processes belonging to 2365595
[2025-06-05 07:13:29] 2025-06-05 11:13:10,134 | INFO     | did not find any defunct processes belonging to 2365595
[2025-06-05 07:13:29] 2025-06-05 11:13:10,134 | INFO     | ready for new job
[2025-06-05 07:13:29] 2025-06-05 11:13:10,135 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:13:29] 2025-06-05 11:13:10,136 | INFO     | **************************************
[2025-06-05 07:13:29] 2025-06-05 11:13:10,136 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:13:29] 2025-06-05 11:13:10,136 | INFO     | **************************************
[2025-06-05 07:13:29] 2025-06-05 11:13:10,136 | INFO     | 
[2025-06-05 07:13:29] 2025-06-05 11:13:10,154 | INFO     | architecture information:
[2025-06-05 07:13:29] 2025-06-05 11:13:10,162 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:13:29] 2025-06-05 11:13:10,247 | INFO     | cat /etc/os-release:
[2025-06-05 07:13:29] NAME="CentOS Linux"
[2025-06-05 07:13:29] VERSION="7 (Core)"
[2025-06-05 07:13:29] ID="centos"
[2025-06-05 07:13:29] ID_LIKE="rhel fedora"
[2025-06-05 07:13:29] VERSION_ID="7"
[2025-06-05 07:13:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:13:29] ANSI_COLOR="0;31"
[2025-06-05 07:13:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:13:29] HOME_URL="https://www.centos.org/"
[2025-06-05 07:13:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:13:29] 
[2025-06-05 07:13:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:13:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:13:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:13:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:13:29] 
[2025-06-05 07:13:29] 2025-06-05 11:13:10,248 | INFO     | **************************************
[2025-06-05 07:13:29] 2025-06-05 11:13:10,751 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 07:13:29] 2025-06-05 11:13:10,799 | INFO     | sufficient remaining disk space (96232013824 B)
[2025-06-05 07:13:29] 2025-06-05 11:13:10,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:13:29] 2025-06-05 11:13:10,800 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:13:29] 2025-06-05 11:13:10,800 | INFO     | update_server=False
[2025-06-05 07:13:29] 2025-06-05 11:13:10,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:13:29] 2025-06-05 11:13:10,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:13:29] 2025-06-05 11:13:10,945 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:13:29] 2025-06-05 11:13:10,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:13:29] 2025-06-05 11:13:10,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:13:29] 2025-06-05 11:13:10,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:13:29] 2025-06-05 11:13:11,040 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 07:13:29] 2025-06-05 11:13:11,040 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 07:13:29] 2025-06-05 11:13:11,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:13:29] 2025-06-05 11:13:11,041 | INFO     | will abort loop
[2025-06-05 07:13:29] 2025-06-05 11:13:11,072 | INFO     | all data control threads have been joined
[2025-06-05 07:13:29] 2025-06-05 11:13:11,417 | INFO     | all job control threads have been joined
[2025-06-05 07:13:29] 2025-06-05 11:13:11,806 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:11,823 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:11,942 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:12,046 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:12,078 | INFO     | [data] control thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:12,120 | INFO     | all payload control threads have been joined
[2025-06-05 07:13:29] 2025-06-05 11:13:12,131 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:12,151 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:12,259 | INFO     | [job] validate thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:12,300 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:12,423 | INFO     | [job] control thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:12,853 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:12,994 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:13,126 | INFO     | [payload] control thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:13,137 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:13:29] 2025-06-05 11:13:14,143 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:14,810 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:21,024 | INFO     | job.realtimelogging is not enabled
[2025-06-05 07:13:29] 2025-06-05 11:13:22,030 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:13:29] 2025-06-05 11:13:23,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139647070578496)>', '<ExcThread(monitor, started 139646348547840)>']
[2025-06-05 07:13:29] 2025-06-05 11:13:24,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:13:29] 2025-06-05 11:13:24,023 | INFO     | [monitor] control thread has ended
[2025-06-05 07:13:29] 2025-06-05 11:13:28,833 | INFO     | all workflow threads have been joined
[2025-06-05 07:13:29] 2025-06-05 11:13:28,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:13:29] 2025-06-05 11:13:28,834 | INFO     | traces error code: 0
[2025-06-05 07:13:29] 2025-06-05 11:13:28,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:13:29] 2025-06-05 11:13:29,180 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:13:29] 2025-06-05 11:13:29,204 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:13:29] 2025-06-05 11:13:29,242 [wrapper] pilotpid: 2357588
[2025-06-05 07:13:29] 2025-06-05 11:13:29,281 [wrapper] Pilot exit status: 0
[2025-06-05 07:13:29] 2025-06-05 11:13:29,444 [wrapper] pandaids: 6667885164
[2025-06-05 07:13:29] 2025-06-05 11:13:29,558 [wrapper] cleanup supervisor_pilot 2862164 2357589
[2025-06-05 07:13:29] 2025-06-05 11:13:29,562 [wrapper] Test setup, not cleaning
[2025-06-05 07:13:29] 2025-06-05 11:13:29,576 [wrapper] apfmon messages muted
[2025-06-05 07:13:29] 2025-06-05 11:13:29,587 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:13:29] 2025-06-05 11:13:29,605 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:13:29]  *** Error codes and diagnostics ***
[2025-06-05 07:13:29]     "exeErrorCode": 0,
[2025-06-05 07:13:29]     "exeErrorDiag": "",
[2025-06-05 07:13:29]     "pilotErrorCode": 0,
[2025-06-05 07:13:29]     "pilotErrorDiag": "",
[2025-06-05 07:13:29]  *** Listing of results directory ***
[2025-06-05 07:13:29] total 418768
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas    495897 May 27 21:31 pilot3.tar.gz
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas      5111 May 27 22:20 queuedata.json
[2025-06-05 07:13:29] -rwx------. 1 boincer umatlas     37140 May 27 22:25 runpilot2-wrapper.sh
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas       100 Jun  5 04:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:13:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 04:47 run_atlas
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas       105 Jun  5 04:47 job.xml
[2025-06-05 07:13:29] -rw-r--r--. 2 boincer umatlas 224288684 Jun  5 04:47 EVNT.44871834._003024.pool.root.1
[2025-06-05 07:13:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 04:47 shared
[2025-06-05 07:13:29] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 04:47 input.tar.gz
[2025-06-05 07:13:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 04:47 start_atlas.sh
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas         0 Jun  5 04:47 boinc_lockfile
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 04:47 pandaJob.out
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas    983281 Jun  5 04:48 agis_schedconf.cvmfs.json
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas   1598969 Jun  5 04:48 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:13:29] drwx------. 4 boincer umatlas      4096 Jun  5 04:48 pilot3
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas      6856 Jun  5 07:04 init_data.xml
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas 198506161 Jun  5 07:12 HITS.44871837._077288.pool.root.1
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas       529 Jun  5 07:12 boinc_task_state.xml
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas      1043 Jun  5 07:12 memory_monitor_summary.json
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas        95 Jun  5 07:12 pilot_heartbeat.json
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas    333872 Jun  5 07:12 log.44871837._077288.job.log.tgz.1
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas      7721 Jun  5 07:13 heartbeat.json
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 07:13 boinc_mmap_file
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas        27 Jun  5 07:13 wrapper_checkpoint.txt
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas      4611 Jun  5 07:13 pilotlog.txt
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas    761623 Jun  5 07:13 log.44871837._077288.job.log.1
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas       357 Jun  5 07:13 output.list
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas       620 Jun  5 07:13 runtime_log
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas   1116160 Jun  5 07:13 result.tar.gz
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas       655 Jun  5 07:13 uJQMDmheLe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmf1aKDm7m0Dtn.diag
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas      8664 Jun  5 07:13 runtime_log.err
[2025-06-05 07:13:29] -rw-r--r--. 1 boincer umatlas     21301 Jun  5 07:13 stderr.txt
[2025-06-05 07:13:29] HITS file was successfully produced:
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas 198506161 Jun  5 07:12 shared/HITS.pool.root.1
[2025-06-05 07:13:29]  *** Contents of shared directory: ***
[2025-06-05 07:13:29] total 414504
[2025-06-05 07:13:29] -rw-r--r--. 2 boincer umatlas 224288684 Jun  5 04:47 ATLAS.root_0
[2025-06-05 07:13:29] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 04:47 input.tar.gz
[2025-06-05 07:13:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 04:47 start_atlas.sh
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas 198506161 Jun  5 07:12 HITS.pool.root.1
[2025-06-05 07:13:29] -rw-------. 1 boincer umatlas   1116160 Jun  5 07:13 result.tar.gz
07:13:31 (2352328): run_atlas exited; CPU time 52669.099958
07:13:31 (2352328): called boinc_finish(0)

</stderr_txt>
]]>

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