Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:39:52 (4003534): wrapper (7.7.26015): starting
04:39:52 (4003534): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:39:52] Arguments: --nthreads 8
[2025-06-05 04:39:52] Threads: 8
[2025-06-05 04:39:52] Checking for CVMFS
[2025-06-05 04:39:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:39:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:39:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:39:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:39:52] 2.12.6.0 46158 24982 269740 146812 2 581 27945235 40960000 25979 16776704 0 390326260 99.778 221652074 33982 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 04:39:52] CVMFS is ok
[2025-06-05 04:39:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:39:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:39:52] Further information can be found at the LHC@home message board.
[2025-06-05 04:39:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:39:52] Checking for apptainer binary...
[2025-06-05 04:39:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:39:52] Running /usr/bin/apptainer --version
[2025-06-05 04:39:52] apptainer version 1.4.1-1.el9
[2025-06-05 04:39:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:39:53] c8-6-11.aglt2.org
[2025-06-05 04:39:53] apptainer works
[2025-06-05 04:39:53] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:39:53] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:39:53] Starting ATLAS job with PandaID=6667885139
[2025-06-05 04:39:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:31:01]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:31:01]  guid=22e6c61c-8913-4d52-82e6-e30bc4b0bbc0
[2025-06-05 05:31:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 05:31:01]  is_altstaged=None
[2025-06-05 05:31:01]  is_tar=False
[2025-06-05 05:31:01]  lfn=log.44871837._077263.job.log.tgz.1
[2025-06-05 05:31:01]  mtime=0
[2025-06-05 05:31:01]  protocol_id=None
[2025-06-05 05:31:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 05:31:01]  replicas=None
[2025-06-05 05:31:01]  scope=mc23_13p6TeV
[2025-06-05 05:31:01]  status=None
[2025-06-05 05:31:01]  status_code=0
[2025-06-05 05:31:01]  storage_token=
[2025-06-05 05:31:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667885139/log.44871837._077263.job.log.tgz.1
[2025-06-05 05:31:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/0b/log.44871837._077263.job.log.tgz.1
[2025-06-05 05:31:01]  workdir=None
[2025-06-05 05:31:01] ]
[2025-06-05 05:31:01] 2025-06-05 09:30:35,467 | INFO     | transferring file log.44871837._077263.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667885139/log.44871837._077263.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 05:31:01] 2025-06-05 09:30:35,467 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667885139/log.44871837._077263.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._077263.job
[2025-06-05 05:31:01] 2025-06-05 09:30:35,481 | INFO     | adding to output.list: log.44871837._077263.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f8/0b/log.44871837._077263.job.log.tg
[2025-06-05 05:31:01] 2025-06-05 09:30:35,481 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 05:31:01] 2025-06-05 09:30:35,482 | INFO     | summary of transferred files:
[2025-06-05 05:31:01] 2025-06-05 09:30:35,482 | INFO     |  -- lfn=log.44871837._077263.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 05:31:01] 2025-06-05 09:30:35,482 | INFO     | stage-out finished correctly
[2025-06-05 05:31:01] 2025-06-05 09:30:35,599 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 05:31:01] 2025-06-05 09:30:37,133 | INFO     | monitor loop #225: job 0:6667885139 is in state 'finished'
[2025-06-05 05:31:01] 2025-06-05 09:30:37,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:31:01] 2025-06-05 09:30:37,271 | INFO     | job 6667885139 has state=finished
[2025-06-05 05:31:01] 2025-06-05 09:30:37,271 | INFO     | preparing for final server update for job 6667885139 in state='finished'
[2025-06-05 05:31:01] 2025-06-05 09:30:37,271 | INFO     | this job has now completed (state=finished)
[2025-06-05 05:31:01] 2025-06-05 09:30:37,271 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 05:31:01] 2025-06-05 09:30:37,271 | INFO     | log transfer has been attempted: DONE
[2025-06-05 05:31:01] 2025-06-05 09:30:37,271 | INFO     | job 6667885139 has finished - writing final server update
[2025-06-05 05:31:01] 2025-06-05 09:30:37,271 | INFO     | total number of processed events: 400 (read)
[2025-06-05 05:31:01] 2025-06-05 09:30:37,289 | INFO     | executing command: lscpu
[2025-06-05 05:31:01] 2025-06-05 09:30:37,362 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 05:31:01] 2025-06-05 09:30:39,637 | INFO     | monitor loop #226: job 0:6667885139 is in state 'finished'
[2025-06-05 05:31:01] 2025-06-05 09:30:39,637 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:31:01] 2025-06-05 09:30:40,348 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 05:31:01] 2025-06-05 09:30:40,349 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667885139/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:31:01] 2025-06-05 09:30:40,349 | INFO     | extracted standard info from prmon json
[2025-06-05 05:31:01] 2025-06-05 09:30:40,349 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:31:01] 2025-06-05 09:30:40,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:31:01] 2025-06-05 09:30:40,349 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:31:01] 2025-06-05 09:30:40,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:31:01] 2025-06-05 09:30:40,350 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:31:01] 2025-06-05 09:30:40,350 | INFO     | sum of square deviations: 24640462.0
[2025-06-05 05:31:01] 2025-06-05 09:30:40,350 | INFO     | sum of deviations: -5103782953.0
[2025-06-05 05:31:01] 2025-06-05 09:30:40,350 | INFO     | mean x: 1749114415.0
[2025-06-05 05:31:01] 2025-06-05 09:30:40,350 | INFO     | mean y: 2761995.2558139535
[2025-06-05 05:31:01] 2025-06-05 09:30:40,350 | INFO     | -- intersect: 362297118899.9099
[2025-06-05 05:31:01] 2025-06-05 09:30:40,350 | INFO     | intersect: 362297118899.9099
[2025-06-05 05:31:01] 2025-06-05 09:30:40,350 | INFO     | chi2: 0.08510719969255785
[2025-06-05 05:31:01] 2025-06-05 09:30:40,350 | INFO     | -- intersect: 362297118899.9099
[2025-06-05 05:31:01] 2025-06-05 09:30:40,350 | INFO     | current memory leak: -207.13 B/s (using 43 data points, chi2=0.09)
[2025-06-05 05:31:01] 2025-06-05 09:30:40,351 | INFO     | ..............................
[2025-06-05 05:31:01] 2025-06-05 09:30:40,351 | INFO     | . Timing measurements:
[2025-06-05 05:31:01] 2025-06-05 09:30:40,351 | INFO     | . get job = 0 s
[2025-06-05 05:31:01] 2025-06-05 09:30:40,351 | INFO     | . initial setup = 2 s
[2025-06-05 05:31:01] 2025-06-05 09:30:40,351 | INFO     | . payload setup = 6 s
[2025-06-05 05:31:01] 2025-06-05 09:30:40,351 | INFO     | . stage-in = 0 s
[2025-06-05 05:31:01] 2025-06-05 09:30:40,351 | INFO     | . payload execution = 3007 s
[2025-06-05 05:31:01] 2025-06-05 09:30:40,351 | INFO     | . stage-out = 0 s
[2025-06-05 05:31:01] 2025-06-05 09:30:40,351 | INFO     | . log creation = 0 s
[2025-06-05 05:31:01] 2025-06-05 09:30:40,351 | INFO     | ..............................
[2025-06-05 05:31:01] 2025-06-05 09:30:40,383 | INFO     | 
[2025-06-05 05:31:01] 2025-06-05 09:30:40,383 | INFO     | job summary report
[2025-06-05 05:31:01] 2025-06-05 09:30:40,383 | INFO     | --------------------------------------------------
[2025-06-05 05:31:01] 2025-06-05 09:30:40,383 | INFO     | PanDA job id: 6667885139
[2025-06-05 05:31:01] 2025-06-05 09:30:40,383 | INFO     | task id: 44871837
[2025-06-05 05:31:01] 2025-06-05 09:30:40,383 | INFO     | errors: (none)
[2025-06-05 05:31:01] 2025-06-05 09:30:40,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:31:01] 2025-06-05 09:30:40,383 | INFO     | pilot state: finished 
[2025-06-05 05:31:01] 2025-06-05 09:30:40,383 | INFO     | transexitcode: 0
[2025-06-05 05:31:01] 2025-06-05 09:30:40,383 | INFO     | exeerrorcode: 0
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | exeerrordiag: 
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | exitcode: 0
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | exitmsg: OK
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | cpuconsumptiontime: 21918 s
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | nevents: 400
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | neventsw: 0
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | pid: 4041215
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | pgrp: 4041215
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | corecount: 8
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | event service: False
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | sizes: {0: 2397278, 1: 2397392, 5: 2397626, 11: 2397682, 3017: 2422911, 3018: 2432036, 3022: 2432150}
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | --------------------------------------------------
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | 
[2025-06-05 05:31:01] 2025-06-05 09:30:40,384 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 05:31:01] 2025-06-05 09:30:40,395 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | job 6667885139 has completed (purged errors)
[2025-06-05 05:31:01] 2025-06-05 09:30:40,396 | INFO     | overall cleanup function is called
[2025-06-05 05:31:01] 2025-06-05 09:30:41,404 | INFO     | --- collectZombieJob: --- 10, [4041215]
[2025-06-05 05:31:01] 2025-06-05 09:30:41,404 | INFO     | zombie collector waiting for pid 4041215
[2025-06-05 05:31:01] 2025-06-05 09:30:41,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:31:01] 2025-06-05 09:30:41,404 | INFO     | collected zombie processes
[2025-06-05 05:31:01] 2025-06-05 09:30:41,404 | INFO     | will attempt to kill all subprocesses of pid=4041215
[2025-06-05 05:31:01] 2025-06-05 09:30:41,856 | INFO     | process IDs to be killed: [4041215] (in reverse order)
[2025-06-05 05:31:01] 2025-06-05 09:30:42,007 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:31:01] 2025-06-05 09:30:42,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:31:01] 2025-06-05 09:30:42,032 | INFO     | did not find any defunct processes belonging to 4041215
[2025-06-05 05:31:01] 2025-06-05 09:30:42,052 | INFO     | did not find any defunct processes belonging to 4041215
[2025-06-05 05:31:01] 2025-06-05 09:30:42,052 | INFO     | ready for new job
[2025-06-05 05:31:01] 2025-06-05 09:30:42,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:31:01] 2025-06-05 09:30:42,053 | INFO     | **************************************
[2025-06-05 05:31:01] 2025-06-05 09:30:42,055 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:31:01] 2025-06-05 09:30:42,055 | INFO     | **************************************
[2025-06-05 05:31:01] 2025-06-05 09:30:42,055 | INFO     | 
[2025-06-05 05:31:01] 2025-06-05 09:30:42,071 | INFO     | architecture information:
[2025-06-05 05:31:01] 2025-06-05 09:30:42,071 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:31:01] 2025-06-05 09:30:42,082 | INFO     | cat /etc/os-release:
[2025-06-05 05:31:01] NAME="CentOS Linux"
[2025-06-05 05:31:01] VERSION="7 (Core)"
[2025-06-05 05:31:01] ID="centos"
[2025-06-05 05:31:01] ID_LIKE="rhel fedora"
[2025-06-05 05:31:01] VERSION_ID="7"
[2025-06-05 05:31:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:31:01] ANSI_COLOR="0;31"
[2025-06-05 05:31:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:31:01] HOME_URL="https://www.centos.org/"
[2025-06-05 05:31:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:31:01] 
[2025-06-05 05:31:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:31:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:31:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:31:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:31:01] 
[2025-06-05 05:31:01] 2025-06-05 09:30:42,082 | INFO     | **************************************
[2025-06-05 05:31:01] 2025-06-05 09:30:42,585 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 05:31:01] 2025-06-05 09:30:42,596 | INFO     | sufficient remaining disk space (173258309632 B)
[2025-06-05 05:31:01] 2025-06-05 09:30:42,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:31:01] 2025-06-05 09:30:42,597 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:31:01] 2025-06-05 09:30:42,597 | INFO     | update_server=False
[2025-06-05 05:31:01] 2025-06-05 09:30:42,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:31:01] 2025-06-05 09:30:42,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:31:01] 2025-06-05 09:30:42,626 | INFO     | all data control threads have been joined
[2025-06-05 05:31:01] 2025-06-05 09:30:42,785 | INFO     | PID=4014540 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 05:31:01] 2025-06-05 09:30:42,785 | INFO     | .. there are 16 such processes running
[2025-06-05 05:31:01] 2025-06-05 09:30:42,786 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:31:01] 2025-06-05 09:30:42,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:31:01] 2025-06-05 09:30:42,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:31:01] 2025-06-05 09:30:43,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:31:01] 2025-06-05 09:30:43,145 | INFO     | aborting loop
[2025-06-05 05:31:01] 2025-06-05 09:30:43,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:31:01] 2025-06-05 09:30:43,601 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:43,631 | INFO     | [data] control thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:43,667 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:43,771 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:43,793 | INFO     | all payload control threads have been joined
[2025-06-05 05:31:01] 2025-06-05 09:30:43,799 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:43,850 | INFO     | all job control threads have been joined
[2025-06-05 05:31:01] 2025-06-05 09:30:44,071 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:44,149 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:44,430 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:44,799 | INFO     | [payload] control thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:44,855 | INFO     | [job] control thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:44,991 | INFO     | [job] validate thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:45,016 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:45,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:31:01] 2025-06-05 09:30:45,528 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:46,398 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:46,603 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:53,165 | INFO     | job.realtimelogging is not enabled
[2025-06-05 05:31:01] 2025-06-05 09:30:54,171 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:31:01] 2025-06-05 09:30:56,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060551112512)>', '<ExcThread(monitor, started 140060049516288)>']
[2025-06-05 05:31:01] 2025-06-05 09:30:56,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:31:01] 2025-06-05 09:30:56,847 | INFO     | [monitor] control thread has ended
[2025-06-05 05:31:01] 2025-06-05 09:31:01,065 | INFO     | all workflow threads have been joined
[2025-06-05 05:31:01] 2025-06-05 09:31:01,066 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:31:01] 2025-06-05 09:31:01,066 | INFO     | traces error code: 0
[2025-06-05 05:31:01] 2025-06-05 09:31:01,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:31:01] 2025-06-05 09:31:01,167 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:31:01] 2025-06-05 09:31:01,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:31:01] 2025-06-05 09:31:01,172 [wrapper] pilotpid: 4014540
[2025-06-05 05:31:01] 2025-06-05 09:31:01,173 [wrapper] Pilot exit status: 0
[2025-06-05 05:31:01] 2025-06-05 09:31:01,180 [wrapper] pandaids: 6667885139
[2025-06-05 05:31:01] 2025-06-05 09:31:01,283 [wrapper] cleanup supervisor_pilot 2024611 4014541
[2025-06-05 05:31:01] 2025-06-05 09:31:01,285 [wrapper] Test setup, not cleaning
[2025-06-05 05:31:01] 2025-06-05 09:31:01,286 [wrapper] apfmon messages muted
[2025-06-05 05:31:01] 2025-06-05 09:31:01,288 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:31:01] 2025-06-05 09:31:01,289 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:31:01]  *** Error codes and diagnostics ***
[2025-06-05 05:31:01]     "exeErrorCode": 0,
[2025-06-05 05:31:01]     "exeErrorDiag": "",
[2025-06-05 05:31:01]     "pilotErrorCode": 0,
[2025-06-05 05:31:01]     "pilotErrorDiag": "",
[2025-06-05 05:31:01]  *** Listing of results directory ***
[2025-06-05 05:31:01] total 420020
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas    495897 May 27 21:31 pilot3.tar.gz
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas      5111 May 27 22:20 queuedata.json
[2025-06-05 05:31:01] -rwx------. 1 boincer umatlas     37140 May 27 22:21 runpilot2-wrapper.sh
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas       100 Jun  5 04:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:31:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 04:39 run_atlas
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas       105 Jun  5 04:39 job.xml
[2025-06-05 05:31:01] -rw-r--r--. 2 boincer umatlas 224624585 Jun  5 04:39 EVNT.44871834._003023.pool.root.1
[2025-06-05 05:31:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 04:39 start_atlas.sh
[2025-06-05 05:31:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 04:39 shared
[2025-06-05 05:31:01] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 04:39 input.tar.gz
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas         0 Jun  5 04:39 boinc_lockfile
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 04:39 pandaJob.out
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas    983281 Jun  5 04:40 agis_schedconf.cvmfs.json
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas   1598969 Jun  5 04:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:31:01] drwx------. 4 boincer umatlas      4096 Jun  5 04:40 pilot3
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas        95 Jun  5 05:29 pilot_heartbeat.json
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas      7159 Jun  5 05:30 init_data.xml
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas       529 Jun  5 05:30 boinc_task_state.xml
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas 200461901 Jun  5 05:30 HITS.44871837._077263.pool.root.1
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas      1035 Jun  5 05:30 memory_monitor_summary.json
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas    281231 Jun  5 05:30 log.44871837._077263.job.log.tgz.1
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas      7694 Jun  5 05:30 heartbeat.json
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 05:31 boinc_mmap_file
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas        27 Jun  5 05:31 wrapper_checkpoint.txt
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas      4822 Jun  5 05:31 pilotlog.txt
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas    315229 Jun  5 05:31 log.44871837._077263.job.log.1
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas       357 Jun  5 05:31 output.list
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas       620 Jun  5 05:31 runtime_log
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas    614400 Jun  5 05:31 result.tar.gz
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 05:31 runtime_log.err
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas       651 Jun  5 05:31 IkIODmuaLe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwmSKDmrG0evm.diag
[2025-06-05 05:31:01] -rw-r--r--. 1 boincer umatlas     21342 Jun  5 05:31 stderr.txt
[2025-06-05 05:31:01] HITS file was successfully produced:
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas 200461901 Jun  5 05:30 shared/HITS.pool.root.1
[2025-06-05 05:31:01]  *** Contents of shared directory: ***
[2025-06-05 05:31:01] total 416244
[2025-06-05 05:31:01] -rw-r--r--. 2 boincer umatlas 224624585 Jun  5 04:39 ATLAS.root_0
[2025-06-05 05:31:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 04:39 start_atlas.sh
[2025-06-05 05:31:01] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 04:39 input.tar.gz
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas 200461901 Jun  5 05:30 HITS.pool.root.1
[2025-06-05 05:31:01] -rw-------. 1 boincer umatlas    614400 Jun  5 05:31 result.tar.gz
05:31:02 (4003534): run_atlas exited; CPU time 21999.383058
05:31:02 (4003534): called boinc_finish(0)

</stderr_txt>
]]>

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