Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:36:59 (2251840): wrapper (7.7.26015): starting
04:36:59 (2251840): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:36:59] Arguments: --nthreads 8
[2025-06-05 04:36:59] Threads: 8
[2025-06-05 04:36:59] Checking for CVMFS
[2025-06-05 04:36:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:37:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:37:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:37:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:37:00] 2.12.6.0 5356 1031 213048 146812 2 528 26230253 32935936 25573 16776704 0 6443339 99.577 5579510 23436 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 04:37:00] CVMFS is ok
[2025-06-05 04:37:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:37:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:37:00] Further information can be found at the LHC@home message board.
[2025-06-05 04:37:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:37:00] Checking for apptainer binary...
[2025-06-05 04:37:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:37:00] Running /usr/bin/apptainer --version
[2025-06-05 04:37:00] apptainer version 1.4.1-1.el9
[2025-06-05 04:37:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:37:00] c7-16-8.aglt2.org
[2025-06-05 04:37:00] apptainer works
[2025-06-05 04:37:00] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:37:00] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:37:00] Starting ATLAS job with PandaID=6680538701
[2025-06-05 04:37:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:55:54]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:55:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 05:55:54]  is_altstaged=None
[2025-06-05 05:55:54]  is_tar=False
[2025-06-05 05:55:54]  lfn=log.45006595._057076.job.log.tgz.1
[2025-06-05 05:55:54]  mtime=0
[2025-06-05 05:55:54]  protocol_id=None
[2025-06-05 05:55:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 05:55:54]  replicas=None
[2025-06-05 05:55:54]  scope=mc23_13p6TeV
[2025-06-05 05:55:54]  status=None
[2025-06-05 05:55:54]  status_code=0
[2025-06-05 05:55:54]  storage_token=
[2025-06-05 05:55:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6680538701/log.45006595._057076.job.log.tgz.1
[2025-06-05 05:55:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/8d/log.45006595._057076.job.log.tgz.1
[2025-06-05 05:55:54]  workdir=None
[2025-06-05 05:55:54] ]
[2025-06-05 05:55:54] 2025-06-05 09:55:37,571 | INFO     | transferring file log.45006595._057076.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6680538701/log.45006595._057076.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 05:55:54] 2025-06-05 09:55:37,572 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6680538701/log.45006595._057076.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._057076.job
[2025-06-05 05:55:54] 2025-06-05 09:55:37,592 | INFO     | adding to output.list: log.45006595._057076.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/8d/log.45006595._057076.job.log.tg
[2025-06-05 05:55:54] 2025-06-05 09:55:37,593 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 05:55:54] 2025-06-05 09:55:37,593 | INFO     | summary of transferred files:
[2025-06-05 05:55:54] 2025-06-05 09:55:37,594 | INFO     |  -- lfn=log.45006595._057076.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 05:55:54] 2025-06-05 09:55:37,594 | INFO     | stage-out finished correctly
[2025-06-05 05:55:54] 2025-06-05 09:55:37,674 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 05:55:54] 2025-06-05 09:55:38,440 | WARNING  | process 2263714 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 05:55:54] 2025-06-05 09:55:38,440 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680538701/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:55:54] 2025-06-05 09:55:38,495 | INFO     | job 6680538701 has state=finished
[2025-06-05 05:55:54] 2025-06-05 09:55:38,495 | INFO     | preparing for final server update for job 6680538701 in state='finished'
[2025-06-05 05:55:54] 2025-06-05 09:55:38,496 | INFO     | this job has now completed (state=finished)
[2025-06-05 05:55:54] 2025-06-05 09:55:38,496 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 05:55:54] 2025-06-05 09:55:38,496 | INFO     | log transfer has been attempted: DONE
[2025-06-05 05:55:54] 2025-06-05 09:55:38,496 | INFO     | job 6680538701 has finished - writing final server update
[2025-06-05 05:55:54] 2025-06-05 09:55:38,496 | INFO     | total number of processed events: 400 (read)
[2025-06-05 05:55:54] 2025-06-05 09:55:38,509 | INFO     | executing command: lscpu
[2025-06-05 05:55:54] 2025-06-05 09:55:38,583 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 05:55:54] 2025-06-05 09:55:38,894 | INFO     | number of running child processes to parent process 2263714: 1
[2025-06-05 05:55:54] 2025-06-05 09:55:38,894 | INFO     | maximum number of monitored processes: 6
[2025-06-05 05:55:54] 2025-06-05 09:55:40,952 | INFO     | PID=2256192 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 05:55:54] 2025-06-05 09:55:40,953 | INFO     | .. there are 20 such processes running
[2025-06-05 05:55:54] 2025-06-05 09:55:41,398 | INFO     | monitor loop #338: job 0:6680538701 is in state 'finished'
[2025-06-05 05:55:54] 2025-06-05 09:55:41,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:55:54] 2025-06-05 09:55:42,185 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 05:55:54] 2025-06-05 09:55:42,186 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680538701/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:55:54] 2025-06-05 09:55:42,186 | INFO     | extracted standard info from prmon json
[2025-06-05 05:55:54] 2025-06-05 09:55:42,187 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:55:54] 2025-06-05 09:55:42,187 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:55:54] 2025-06-05 09:55:42,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:55:54] 2025-06-05 09:55:42,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:55:54] 2025-06-05 09:55:42,189 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:55:54] 2025-06-05 09:55:42,190 | INFO     | sum of square deviations: 106336877.5
[2025-06-05 05:55:54] 2025-06-05 09:55:42,191 | INFO     | sum of deviations: -14120174897.000002
[2025-06-05 05:55:54] 2025-06-05 09:55:42,191 | INFO     | mean x: 1749115080.5
[2025-06-05 05:55:54] 2025-06-05 09:55:42,191 | INFO     | mean y: 2380777.9714285713
[2025-06-05 05:55:54] 2025-06-05 09:55:42,191 | INFO     | -- intersect: 232262453034.09198
[2025-06-05 05:55:54] 2025-06-05 09:55:42,191 | INFO     | intersect: 232262453034.09198
[2025-06-05 05:55:54] 2025-06-05 09:55:42,191 | INFO     | chi2: 0.17978254642109295
[2025-06-05 05:55:54] 2025-06-05 09:55:42,191 | INFO     | -- intersect: 232262453034.09198
[2025-06-05 05:55:54] 2025-06-05 09:55:42,191 | INFO     | current memory leak: -132.79 B/s (using 70 data points, chi2=0.18)
[2025-06-05 05:55:54] 2025-06-05 09:55:42,192 | INFO     | ..............................
[2025-06-05 05:55:54] 2025-06-05 09:55:42,192 | INFO     | . Timing measurements:
[2025-06-05 05:55:54] 2025-06-05 09:55:42,192 | INFO     | . get job = 0 s
[2025-06-05 05:55:54] 2025-06-05 09:55:42,192 | INFO     | . initial setup = 3 s
[2025-06-05 05:55:54] 2025-06-05 09:55:42,192 | INFO     | . payload setup = 10 s
[2025-06-05 05:55:54] 2025-06-05 09:55:42,192 | INFO     | . stage-in = 0 s
[2025-06-05 05:55:54] 2025-06-05 09:55:42,192 | INFO     | . payload execution = 4670 s
[2025-06-05 05:55:54] 2025-06-05 09:55:42,192 | INFO     | . stage-out = 0 s
[2025-06-05 05:55:54] 2025-06-05 09:55:42,192 | INFO     | . log creation = 0 s
[2025-06-05 05:55:54] 2025-06-05 09:55:42,192 | INFO     | ..............................
[2025-06-05 05:55:54] 2025-06-05 09:55:42,253 | INFO     | 
[2025-06-05 05:55:54] 2025-06-05 09:55:42,253 | INFO     | job summary report
[2025-06-05 05:55:54] 2025-06-05 09:55:42,253 | INFO     | --------------------------------------------------
[2025-06-05 05:55:54] 2025-06-05 09:55:42,253 | INFO     | PanDA job id: 6680538701
[2025-06-05 05:55:54] 2025-06-05 09:55:42,253 | INFO     | task id: 45006595
[2025-06-05 05:55:54] 2025-06-05 09:55:42,253 | INFO     | errors: (none)
[2025-06-05 05:55:54] 2025-06-05 09:55:42,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:55:54] 2025-06-05 09:55:42,253 | INFO     | pilot state: finished 
[2025-06-05 05:55:54] 2025-06-05 09:55:42,253 | INFO     | transexitcode: 0
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | exeerrorcode: 0
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | exeerrordiag: 
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | exitcode: 0
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | exitmsg: OK
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | cpuconsumptiontime: 27859 s
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | nevents: 400
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | neventsw: 0
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | pid: 2263714
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | pgrp: 2263714
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | corecount: 8
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | event service: False
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | sizes: {0: 2397291, 6: 2397497, 11: 2397525, 4685: 2423475, 4686: 2432472, 4690: 2432586}
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | --------------------------------------------------
[2025-06-05 05:55:54] 2025-06-05 09:55:42,254 | INFO     | 
[2025-06-05 05:55:54] 2025-06-05 09:55:42,255 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 05:55:54] 2025-06-05 09:55:42,277 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,278 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,278 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,278 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,278 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,278 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,278 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,278 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | job 6680538701 has completed (purged errors)
[2025-06-05 05:55:54] 2025-06-05 09:55:42,279 | INFO     | overall cleanup function is called
[2025-06-05 05:55:54] 2025-06-05 09:55:43,288 | INFO     | --- collectZombieJob: --- 10, [2263714]
[2025-06-05 05:55:54] 2025-06-05 09:55:43,288 | INFO     | zombie collector waiting for pid 2263714
[2025-06-05 05:55:54] 2025-06-05 09:55:43,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:55:54] 2025-06-05 09:55:43,288 | INFO     | collected zombie processes
[2025-06-05 05:55:54] 2025-06-05 09:55:43,288 | INFO     | will attempt to kill all subprocesses of pid=2263714
[2025-06-05 05:55:54] 2025-06-05 09:55:43,707 | INFO     | process IDs to be killed: [2263714] (in reverse order)
[2025-06-05 05:55:54] 2025-06-05 09:55:43,822 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:55:54] 2025-06-05 09:55:43,823 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:55:54] 2025-06-05 09:55:43,841 | INFO     | did not find any defunct processes belonging to 2263714
[2025-06-05 05:55:54] 2025-06-05 09:55:43,858 | INFO     | did not find any defunct processes belonging to 2263714
[2025-06-05 05:55:54] 2025-06-05 09:55:43,858 | INFO     | ready for new job
[2025-06-05 05:55:54] 2025-06-05 09:55:43,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:55:54] 2025-06-05 09:55:43,860 | INFO     | **************************************
[2025-06-05 05:55:54] 2025-06-05 09:55:43,860 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:55:54] 2025-06-05 09:55:43,860 | INFO     | **************************************
[2025-06-05 05:55:54] 2025-06-05 09:55:43,860 | INFO     | 
[2025-06-05 05:55:54] 2025-06-05 09:55:43,877 | INFO     | architecture information:
[2025-06-05 05:55:54] 2025-06-05 09:55:43,877 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:55:54] 2025-06-05 09:55:43,895 | INFO     | cat /etc/os-release:
[2025-06-05 05:55:54] NAME="CentOS Linux"
[2025-06-05 05:55:54] VERSION="7 (Core)"
[2025-06-05 05:55:54] ID="centos"
[2025-06-05 05:55:54] ID_LIKE="rhel fedora"
[2025-06-05 05:55:54] VERSION_ID="7"
[2025-06-05 05:55:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:55:54] ANSI_COLOR="0;31"
[2025-06-05 05:55:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:55:54] HOME_URL="https://www.centos.org/"
[2025-06-05 05:55:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:55:54] 
[2025-06-05 05:55:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:55:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:55:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:55:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:55:54] 
[2025-06-05 05:55:54] 2025-06-05 09:55:43,895 | INFO     | **************************************
[2025-06-05 05:55:54] 2025-06-05 09:55:44,398 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 05:55:54] 2025-06-05 09:55:44,417 | INFO     | sufficient remaining disk space (76653002752 B)
[2025-06-05 05:55:54] 2025-06-05 09:55:44,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:55:54] 2025-06-05 09:55:44,418 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:55:54] 2025-06-05 09:55:44,418 | INFO     | update_server=False
[2025-06-05 05:55:54] 2025-06-05 09:55:44,418 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:55:54] 2025-06-05 09:55:44,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:55:54] 2025-06-05 09:55:44,660 | INFO     | all data control threads have been joined
[2025-06-05 05:55:54] 2025-06-05 09:55:44,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:55:54] 2025-06-05 09:55:44,909 | INFO     | aborting loop
[2025-06-05 05:55:54] 2025-06-05 09:55:44,964 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:55:54] 2025-06-05 09:55:44,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:55:54] 2025-06-05 09:55:44,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:55:54] 2025-06-05 09:55:45,066 | INFO     | all job control threads have been joined
[2025-06-05 05:55:54] 2025-06-05 09:55:45,423 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:45,426 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:45,660 | INFO     | [data] control thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:45,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:55:54] 2025-06-05 09:55:45,685 | INFO     | all payload control threads have been joined
[2025-06-05 05:55:54] 2025-06-05 09:55:45,719 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:45,730 | INFO     | [job] validate thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:45,914 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:46,015 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:46,071 | INFO     | [job] control thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:46,133 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:46,385 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:46,690 | INFO     | [payload] control thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:46,693 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:46,882 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:47,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:55:54] 2025-06-05 09:55:47,685 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:48,272 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:48,426 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:55:54] 2025-06-05 09:55:49,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243990558528)>', '<ExcThread(monitor, started 140243718084352)>']
[2025-06-05 05:55:54] 2025-06-05 09:55:49,990 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:55:54] 2025-06-05 09:55:49,990 | INFO     | [monitor] control thread has ended
[2025-06-05 05:55:54] 2025-06-05 09:55:54,418 | INFO     | all workflow threads have been joined
[2025-06-05 05:55:54] 2025-06-05 09:55:54,418 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:55:54] 2025-06-05 09:55:54,418 | INFO     | traces error code: 0
[2025-06-05 05:55:54] 2025-06-05 09:55:54,419 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:55:54] 2025-06-05 09:55:54,541 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:55:54] 2025-06-05 09:55:54,544 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:55:54] 2025-06-05 09:55:54,548 [wrapper] pilotpid: 2256192
[2025-06-05 05:55:54] 2025-06-05 09:55:54,551 [wrapper] Pilot exit status: 0
[2025-06-05 05:55:54] 2025-06-05 09:55:54,568 [wrapper] pandaids: 6680538701
[2025-06-05 05:55:54] 2025-06-05 09:55:54,669 [wrapper] cleanup supervisor_pilot 2998478 2256193
[2025-06-05 05:55:54] 2025-06-05 09:55:54,673 [wrapper] Test setup, not cleaning
[2025-06-05 05:55:54] 2025-06-05 09:55:54,675 [wrapper] apfmon messages muted
[2025-06-05 05:55:54] 2025-06-05 09:55:54,678 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:55:54] 2025-06-05 09:55:54,680 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:55:54]  *** Error codes and diagnostics ***
[2025-06-05 05:55:54]     "exeErrorCode": 0,
[2025-06-05 05:55:54]     "exeErrorDiag": "",
[2025-06-05 05:55:54]     "pilotErrorCode": 0,
[2025-06-05 05:55:54]     "pilotErrorDiag": "",
[2025-06-05 05:55:54]  *** Listing of results directory ***
[2025-06-05 05:55:54] total 388912
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas    495897 Jun  5 03:59 pilot3.tar.gz
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas      5112 Jun  5 04:35 queuedata.json
[2025-06-05 05:55:54] -rwx------. 1 boincer umatlas     37140 Jun  5 04:36 runpilot2-wrapper.sh
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas       100 Jun  5 04:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:55:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 04:36 run_atlas
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas       105 Jun  5 04:36 job.xml
[2025-06-05 05:55:54] -rw-r--r--. 2 boincer umatlas 216157990 Jun  5 04:36 EVNT.45006593._002039.pool.root.1
[2025-06-05 05:55:54] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 04:36 start_atlas.sh
[2025-06-05 05:55:54] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 04:36 shared
[2025-06-05 05:55:54] -rw-r--r--. 2 boincer umatlas    508889 Jun  5 04:36 input.tar.gz
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas         0 Jun  5 04:36 boinc_lockfile
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas      2524 Jun  5 04:37 pandaJob.out
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas    983281 Jun  5 04:37 agis_schedconf.cvmfs.json
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas   1598969 Jun  5 04:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:55:54] drwx------. 4 boincer umatlas      4096 Jun  5 04:37 pilot3
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas 176748598 Jun  5 05:55 HITS.45006595._057076.pool.root.1
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas       529 Jun  5 05:55 boinc_task_state.xml
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas      6930 Jun  5 05:55 init_data.xml
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas        95 Jun  5 05:55 pilot_heartbeat.json
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas      1034 Jun  5 05:55 memory_monitor_summary.json
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas    298320 Jun  5 05:55 log.45006595._057076.job.log.tgz.1
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas      7696 Jun  5 05:55 heartbeat.json
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas        27 Jun  5 05:55 wrapper_checkpoint.txt
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas      4353 Jun  5 05:55 pilotlog.txt
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 05:55 boinc_mmap_file
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas    456892 Jun  5 05:55 log.45006595._057076.job.log.1
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas       357 Jun  5 05:55 output.list
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas       620 Jun  5 05:55 runtime_log
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas    778240 Jun  5 05:55 result.tar.gz
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas      8655 Jun  5 05:55 runtime_log.err
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas       652 Jun  5 05:55 bL0NDmVGLh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmK5nKDmWoZXFn.diag
[2025-06-05 05:55:54] -rw-r--r--. 1 boincer umatlas     21438 Jun  5 05:55 stderr.txt
[2025-06-05 05:55:54] HITS file was successfully produced:
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas 176748598 Jun  5 05:55 shared/HITS.pool.root.1
[2025-06-05 05:55:54]  *** Contents of shared directory: ***
[2025-06-05 05:55:54] total 384980
[2025-06-05 05:55:54] -rw-r--r--. 2 boincer umatlas 216157990 Jun  5 04:36 ATLAS.root_0
[2025-06-05 05:55:54] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 04:36 start_atlas.sh
[2025-06-05 05:55:54] -rw-r--r--. 2 boincer umatlas    508889 Jun  5 04:36 input.tar.gz
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas 176748598 Jun  5 05:55 HITS.pool.root.1
[2025-06-05 05:55:54] -rw-------. 1 boincer umatlas    778240 Jun  5 05:55 result.tar.gz
05:55:55 (2251840): run_atlas exited; CPU time 27980.425555
05:55:55 (2251840): called boinc_finish(0)

</stderr_txt>
]]>

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