Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:35:59 (3399329): wrapper (7.7.26015): starting
04:35:59 (3399329): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 04:35:59] Arguments: --nthreads 12
[2025-06-05 04:35:59] Threads: 12
[2025-06-05 04:35:59] Checking for CVMFS
[2025-06-05 04:36:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:36:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:36:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:36:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:36:00] 2.12.6.0 665990 24511 427000 146812 1 70 31853299 32935936 9769 16776704 1 83972480 99.631 79198247 33894 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 04:36:00] CVMFS is ok
[2025-06-05 04:36:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:36:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:36:00] Further information can be found at the LHC@home message board.
[2025-06-05 04:36:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:36:00] Checking for apptainer binary...
[2025-06-05 04:36:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:36:00] Running /usr/bin/apptainer --version
[2025-06-05 04:36:00] apptainer version 1.4.1-1.el9
[2025-06-05 04:36:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:36:00] c6-6-39-1.aglt2.org
[2025-06-05 04:36:00] apptainer works
[2025-06-05 04:36:00] Set ATHENA_PROC_NUMBER=12
[2025-06-05 04:36:00] Set ATHENA_CORE_NUMBER=12
[2025-06-05 04:36:00] Starting ATLAS job with PandaID=6680537539
[2025-06-05 04:36:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:51:09]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:51:09]  filetype=log
[2025-06-05 05:51:09]  guid=8b1632bd-2439-4052-a443-ac31d7444ebb
[2025-06-05 05:51:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 05:51:09]  is_altstaged=None
[2025-06-05 05:51:09]  is_tar=False
[2025-06-05 05:51:09]  lfn=log.44871837._102287.job.log.tgz.1
[2025-06-05 05:51:09]  mtime=0
[2025-06-05 05:51:09]  protocol_id=None
[2025-06-05 05:51:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 05:51:09]  replicas=None
[2025-06-05 05:51:09]  scope=mc23_13p6TeV
[2025-06-05 05:51:09]  status=None
[2025-06-05 05:51:09]  status_code=0
[2025-06-05 05:51:09]  storage_token=
[2025-06-05 05:51:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6680537539/log.44871837._102287.job.log.tgz.1
[2025-06-05 05:51:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/65/log.44871837._102287.job.log.tgz.1
[2025-06-05 05:51:09]  workdir=None
[2025-06-05 05:51:09] ]
[2025-06-05 05:51:09] 2025-06-05 09:50:47,395 | INFO     | transferring file log.44871837._102287.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6680537539/log.44871837._102287.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 05:51:09] 2025-06-05 09:50:47,395 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6680537539/log.44871837._102287.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._102287.job
[2025-06-05 05:51:09] 2025-06-05 09:50:47,407 | INFO     | adding to output.list: log.44871837._102287.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/65/log.44871837._102287.job.log.tg
[2025-06-05 05:51:09] 2025-06-05 09:50:47,408 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 05:51:09] 2025-06-05 09:50:47,408 | INFO     | summary of transferred files:
[2025-06-05 05:51:09] 2025-06-05 09:50:47,408 | INFO     |  -- lfn=log.44871837._102287.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 05:51:09] 2025-06-05 09:50:47,408 | INFO     | stage-out finished correctly
[2025-06-05 05:51:09] 2025-06-05 09:50:48,424 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 05:51:09] 2025-06-05 09:50:49,420 | INFO     | monitor loop #333: job 0:6680537539 is in state 'finished'
[2025-06-05 05:51:09] 2025-06-05 09:50:49,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:51:09] 2025-06-05 09:50:51,208 | INFO     | job 6680537539 has state=finished
[2025-06-05 05:51:09] 2025-06-05 09:50:51,209 | INFO     | preparing for final server update for job 6680537539 in state='finished'
[2025-06-05 05:51:09] 2025-06-05 09:50:51,209 | INFO     | this job has now completed (state=finished)
[2025-06-05 05:51:09] 2025-06-05 09:50:51,209 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 05:51:09] 2025-06-05 09:50:51,209 | INFO     | log transfer has been attempted: DONE
[2025-06-05 05:51:09] 2025-06-05 09:50:51,209 | INFO     | job 6680537539 has finished - writing final server update
[2025-06-05 05:51:09] 2025-06-05 09:50:51,210 | INFO     | total number of processed events: 400 (read)
[2025-06-05 05:51:09] 2025-06-05 09:50:51,226 | INFO     | executing command: lscpu
[2025-06-05 05:51:09] 2025-06-05 09:50:51,297 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 05:51:09] 2025-06-05 09:50:51,924 | INFO     | monitor loop #334: job 0:6680537539 is in state 'finished'
[2025-06-05 05:51:09] 2025-06-05 09:50:51,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:51:09] 2025-06-05 09:50:54,128 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 05:51:09] 2025-06-05 09:50:54,129 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680537539/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:51:09] 2025-06-05 09:50:54,129 | INFO     | extracted standard info from prmon json
[2025-06-05 05:51:09] 2025-06-05 09:50:54,129 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:51:09] 2025-06-05 09:50:54,129 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:51:09] 2025-06-05 09:50:54,129 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:51:09] 2025-06-05 09:50:54,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:51:09] 2025-06-05 09:50:54,131 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:51:09] 2025-06-05 09:50:54,131 | INFO     | sum of square deviations: 89127252.5
[2025-06-05 05:51:09] 2025-06-05 09:50:54,131 | INFO     | sum of deviations: -12437721941.000002
[2025-06-05 05:51:09] 2025-06-05 09:50:54,131 | INFO     | mean x: 1749114884.5
[2025-06-05 05:51:09] 2025-06-05 09:50:54,131 | INFO     | mean y: 2607692.272727273
[2025-06-05 05:51:09] 2025-06-05 09:50:54,131 | INFO     | -- intersect: 244091861720.106
[2025-06-05 05:51:09] 2025-06-05 09:50:54,131 | INFO     | intersect: 244091861720.106
[2025-06-05 05:51:09] 2025-06-05 09:50:54,131 | INFO     | chi2: 0.12683418518011888
[2025-06-05 05:51:09] 2025-06-05 09:50:54,131 | INFO     | -- intersect: 244091861720.106
[2025-06-05 05:51:09] 2025-06-05 09:50:54,131 | INFO     | current memory leak: -139.55 B/s (using 66 data points, chi2=0.13)
[2025-06-05 05:51:09] 2025-06-05 09:50:54,132 | INFO     | ..............................
[2025-06-05 05:51:09] 2025-06-05 09:50:54,132 | INFO     | . Timing measurements:
[2025-06-05 05:51:09] 2025-06-05 09:50:54,132 | INFO     | . get job = 0 s
[2025-06-05 05:51:09] 2025-06-05 09:50:54,132 | INFO     | . initial setup = 2 s
[2025-06-05 05:51:09] 2025-06-05 09:50:54,132 | INFO     | . payload setup = 6 s
[2025-06-05 05:51:09] 2025-06-05 09:50:54,132 | INFO     | . stage-in = 0 s
[2025-06-05 05:51:09] 2025-06-05 09:50:54,132 | INFO     | . payload execution = 4450 s
[2025-06-05 05:51:09] 2025-06-05 09:50:54,132 | INFO     | . stage-out = 0 s
[2025-06-05 05:51:09] 2025-06-05 09:50:54,132 | INFO     | . log creation = 0 s
[2025-06-05 05:51:09] 2025-06-05 09:50:54,132 | INFO     | ..............................
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | 
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | job summary report
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | --------------------------------------------------
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | PanDA job id: 6680537539
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | task id: 44871837
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | errors: (none)
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | pilot state: finished 
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | transexitcode: 0
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | exeerrorcode: 0
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | exeerrordiag: 
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | exitcode: 0
[2025-06-05 05:51:09] 2025-06-05 09:50:54,350 | INFO     | exitmsg: OK
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | cpuconsumptiontime: 46669 s
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | nevents: 400
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | neventsw: 0
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | pid: 3409313
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | pgrp: 3409313
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | corecount: 12
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | event service: False
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | sizes: {0: 2397120, 1: 2397319, 5: 2397525, 11: 2397581, 4460: 2423651, 4461: 2432775, 4462: 2432775, 4468: 2432945}
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | --------------------------------------------------
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | 
[2025-06-05 05:51:09] 2025-06-05 09:50:54,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 05:51:09] 2025-06-05 09:50:54,367 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,367 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,367 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,367 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:51:09] 2025-06-05 09:50:54,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:51:09] 2025-06-05 09:50:54,369 | INFO     | job 6680537539 has completed (purged errors)
[2025-06-05 05:51:09] 2025-06-05 09:50:54,369 | INFO     | overall cleanup function is called
[2025-06-05 05:51:09] 2025-06-05 09:50:55,376 | INFO     | --- collectZombieJob: --- 10, [3409313]
[2025-06-05 05:51:09] 2025-06-05 09:50:55,376 | INFO     | zombie collector waiting for pid 3409313
[2025-06-05 05:51:09] 2025-06-05 09:50:55,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:51:09] 2025-06-05 09:50:55,376 | INFO     | collected zombie processes
[2025-06-05 05:51:09] 2025-06-05 09:50:55,376 | INFO     | will attempt to kill all subprocesses of pid=3409313
[2025-06-05 05:51:09] 2025-06-05 09:50:55,550 | INFO     | process IDs to be killed: [3409313] (in reverse order)
[2025-06-05 05:51:09] 2025-06-05 09:50:55,621 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:51:09] 2025-06-05 09:50:55,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:51:09] 2025-06-05 09:50:55,630 | INFO     | did not find any defunct processes belonging to 3409313
[2025-06-05 05:51:09] 2025-06-05 09:50:55,638 | INFO     | did not find any defunct processes belonging to 3409313
[2025-06-05 05:51:09] 2025-06-05 09:50:55,638 | INFO     | ready for new job
[2025-06-05 05:51:09] 2025-06-05 09:50:55,638 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:51:09] 2025-06-05 09:50:55,639 | INFO     | **************************************
[2025-06-05 05:51:09] 2025-06-05 09:50:55,640 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:51:09] 2025-06-05 09:50:55,640 | INFO     | **************************************
[2025-06-05 05:51:09] 2025-06-05 09:50:55,640 | INFO     | 
[2025-06-05 05:51:09] 2025-06-05 09:50:55,656 | INFO     | architecture information:
[2025-06-05 05:51:09] 2025-06-05 09:50:55,656 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:51:09] 2025-06-05 09:50:55,670 | INFO     | cat /etc/os-release:
[2025-06-05 05:51:09] NAME="CentOS Linux"
[2025-06-05 05:51:09] VERSION="7 (Core)"
[2025-06-05 05:51:09] ID="centos"
[2025-06-05 05:51:09] ID_LIKE="rhel fedora"
[2025-06-05 05:51:09] VERSION_ID="7"
[2025-06-05 05:51:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:51:09] ANSI_COLOR="0;31"
[2025-06-05 05:51:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:51:09] HOME_URL="https://www.centos.org/"
[2025-06-05 05:51:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:51:09] 
[2025-06-05 05:51:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:51:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:51:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:51:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:51:09] 
[2025-06-05 05:51:09] 2025-06-05 09:50:55,671 | INFO     | **************************************
[2025-06-05 05:51:09] 2025-06-05 09:50:56,174 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 05:51:09] 2025-06-05 09:50:56,193 | INFO     | sufficient remaining disk space (76554436608 B)
[2025-06-05 05:51:09] 2025-06-05 09:50:56,193 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:51:09] 2025-06-05 09:50:56,194 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:51:09] 2025-06-05 09:50:56,194 | INFO     | update_server=False
[2025-06-05 05:51:09] 2025-06-05 09:50:56,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:51:09] 2025-06-05 09:50:56,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:51:09] 2025-06-05 09:50:56,194 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:51:09] 2025-06-05 09:50:56,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:51:09] 2025-06-05 09:50:56,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:51:09] 2025-06-05 09:50:56,196 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:51:09] 2025-06-05 09:50:56,196 | INFO     | aborting loop
[2025-06-05 05:51:09] 2025-06-05 09:50:56,196 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:51:09] 2025-06-05 09:50:56,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:51:09] 2025-06-05 09:50:56,224 | INFO     | all data control threads have been joined
[2025-06-05 05:51:09] 2025-06-05 09:50:56,564 | INFO     | all payload control threads have been joined
[2025-06-05 05:51:09] 2025-06-05 09:50:57,197 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:57,198 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:57,199 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:57,201 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:57,229 | INFO     | [data] control thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:57,287 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:57,570 | INFO     | [payload] control thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:57,630 | INFO     | all job control threads have been joined
[2025-06-05 05:51:09] 2025-06-05 09:50:57,739 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:58,051 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:58,201 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:58,474 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:58,490 | INFO     | [job] validate thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:58,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:58,635 | INFO     | [job] control thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:58,665 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:50:59,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:51:09] 2025-06-05 09:51:03,027 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:51:09] 2025-06-05 09:51:03,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891370075968)>', '<ExcThread(monitor, started 139890884855552)>']
[2025-06-05 05:51:09] 2025-06-05 09:51:04,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:51:09] 2025-06-05 09:51:04,236 | INFO     | [monitor] control thread has ended
[2025-06-05 05:51:09] 2025-06-05 09:51:07,704 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-06-05 05:51:09] 2025-06-05 09:51:08,757 | INFO     | all workflow threads have been joined
[2025-06-05 05:51:09] 2025-06-05 09:51:08,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:51:09] 2025-06-05 09:51:08,763 | INFO     | traces error code: 0
[2025-06-05 05:51:09] 2025-06-05 09:51:08,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:51:09] 2025-06-05 09:51:08,891 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:51:09] 2025-06-05 09:51:08,893 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:51:09] 2025-06-05 09:51:08,896 [wrapper] pilotpid: 3402932
[2025-06-05 05:51:09] 2025-06-05 09:51:08,898 [wrapper] Pilot exit status: 0
[2025-06-05 05:51:09] 2025-06-05 09:51:08,907 [wrapper] pandaids: 6680537539
[2025-06-05 05:51:09] 2025-06-05 09:51:08,956 [wrapper] cleanup supervisor_pilot 3726756 3402933
[2025-06-05 05:51:09] 2025-06-05 09:51:08,958 [wrapper] Test setup, not cleaning
[2025-06-05 05:51:09] 2025-06-05 09:51:08,961 [wrapper] apfmon messages muted
[2025-06-05 05:51:09] 2025-06-05 09:51:08,964 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:51:09] 2025-06-05 09:51:08,966 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:51:09]  *** Error codes and diagnostics ***
[2025-06-05 05:51:09]     "exeErrorCode": 0,
[2025-06-05 05:51:09]     "exeErrorDiag": "",
[2025-06-05 05:51:09]     "pilotErrorCode": 0,
[2025-06-05 05:51:09]     "pilotErrorDiag": "",
[2025-06-05 05:51:09]  *** Listing of results directory ***
[2025-06-05 05:51:09] total 414808
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas    495897 Jun  5 03:59 pilot3.tar.gz
[2025-06-05 05:51:09] -rwx------. 1 boincer umatlas     37140 Jun  5 04:35 runpilot2-wrapper.sh
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas      5112 Jun  5 04:35 queuedata.json
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas       100 Jun  5 04:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:51:09] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 04:35 run_atlas
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas       105 Jun  5 04:35 job.xml
[2025-06-05 05:51:09] -rw-r--r--. 2 boincer umatlas 224538170 Jun  5 04:35 EVNT.44871834._003240.pool.root.1
[2025-06-05 05:51:09] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 04:35 start_atlas.sh
[2025-06-05 05:51:09] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 04:35 shared
[2025-06-05 05:51:09] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 04:35 input.tar.gz
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas         0 Jun  5 04:35 boinc_lockfile
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 04:36 pandaJob.out
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas    983281 Jun  5 04:36 agis_schedconf.cvmfs.json
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas   1598969 Jun  5 04:36 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:51:09] drwx------. 4 boincer umatlas      4096 Jun  5 04:36 pilot3
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 05:49 init_data.xml
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas 194784959 Jun  5 05:50 HITS.44871837._102287.pool.root.1
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas       529 Jun  5 05:50 boinc_task_state.xml
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas        95 Jun  5 05:50 pilot_heartbeat.json
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas      1039 Jun  5 05:50 memory_monitor_summary.json
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas    360567 Jun  5 05:50 log.44871837._102287.job.log.tgz.1
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 05:50 boinc_mmap_file
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas        27 Jun  5 05:50 wrapper_checkpoint.txt
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas      7729 Jun  5 05:50 heartbeat.json
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas      4476 Jun  5 05:51 pilotlog.txt
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas    445725 Jun  5 05:51 log.44871837._102287.job.log.1
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas       357 Jun  5 05:51 output.list
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas       620 Jun  5 05:51 runtime_log
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas    829440 Jun  5 05:51 result.tar.gz
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas      8667 Jun  5 05:51 runtime_log.err
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas       654 Jun  5 05:51 rtYLDmXFLh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmI5nKDm5Bs0Jo.diag
[2025-06-05 05:51:09] -rw-r--r--. 1 boincer umatlas     21229 Jun  5 05:51 stderr.txt
[2025-06-05 05:51:09] HITS file was successfully produced:
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas 194784959 Jun  5 05:50 shared/HITS.pool.root.1
[2025-06-05 05:51:09]  *** Contents of shared directory: ***
[2025-06-05 05:51:09] total 410824
[2025-06-05 05:51:09] -rw-r--r--. 2 boincer umatlas 224538170 Jun  5 04:35 ATLAS.root_0
[2025-06-05 05:51:09] -rw-r--r--. 2 boincer umatlas     15095 Jun  5 04:35 start_atlas.sh
[2025-06-05 05:51:09] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 04:35 input.tar.gz
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas 194784959 Jun  5 05:50 HITS.pool.root.1
[2025-06-05 05:51:09] -rw-------. 1 boincer umatlas    829440 Jun  5 05:51 result.tar.gz
05:51:10 (3399329): run_atlas exited; CPU time 46715.241224
05:51:10 (3399329): called boinc_finish(0)

</stderr_txt>
]]>

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