Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:30:41 (28542): wrapper (7.7.26015): starting
04:30:41 (28542): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:30:41] Arguments: --nthreads 8
[2025-06-05 04:30:41] Threads: 8
[2025-06-05 04:30:41] Checking for CVMFS
[2025-06-05 04:30:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:30:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:30:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:30:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:30:41] 2.11.2.0 29495 109061 311556 146812 3 105 14670834 18432000 8155 130560 0 278689972 98.784 736415645 37240 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 04:30:41] CVMFS is ok
[2025-06-05 04:30:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:30:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:30:41] Further information can be found at the LHC@home message board.
[2025-06-05 04:30:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:30:41] Checking for apptainer binary...
[2025-06-05 04:30:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:30:41] Running /usr/bin/apptainer --version
[2025-06-05 04:30:42] apptainer version 1.3.2-1.el7
[2025-06-05 04:30:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:30:46] c-211-7.aglt2.org
[2025-06-05 04:30:46] apptainer works
[2025-06-05 04:30:46] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:30:46] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:30:46] Starting ATLAS job with PandaID=6667885281
[2025-06-05 04:30:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:03:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:03:51] 2025-06-05 12:03:37,074 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:03:51] 2025-06-05 12:03:37,075 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667885281/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:03:51] 2025-06-05 12:03:37,075 | INFO     | extracted standard info from prmon json
[2025-06-05 08:03:51] 2025-06-05 12:03:37,075 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:03:51] 2025-06-05 12:03:37,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:03:51] 2025-06-05 12:03:37,076 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:03:51] 2025-06-05 12:03:37,076 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:03:51] 2025-06-05 12:03:37,078 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:03:51] 2025-06-05 12:03:37,078 | INFO     | sum of square deviations: 2790352713.7644095
[2025-06-05 08:03:51] 2025-06-05 12:03:37,079 | INFO     | sum of deviations: -20892183623.317303
[2025-06-05 08:03:51] 2025-06-05 12:03:37,079 | INFO     | mean x: 1749118674.5336537
[2025-06-05 08:03:51] 2025-06-05 12:03:37,079 | INFO     | mean y: 2504931.7596153845
[2025-06-05 08:03:51] 2025-06-05 12:03:37,079 | INFO     | -- intersect: 13098665982.321266
[2025-06-05 08:03:51] 2025-06-05 12:03:37,079 | INFO     | intersect: 13098665982.321266
[2025-06-05 08:03:51] 2025-06-05 12:03:37,079 | INFO     | chi2: 2.6186195482018113
[2025-06-05 08:03:51] 2025-06-05 12:03:37,080 | INFO     | sum of square deviations: 2593923258.7586155
[2025-06-05 08:03:51] 2025-06-05 12:03:37,080 | INFO     | sum of deviations: -6887611148.999998
[2025-06-05 08:03:51] 2025-06-05 12:03:37,080 | INFO     | mean x: 1749118522.0344827
[2025-06-05 08:03:51] 2025-06-05 12:03:37,080 | INFO     | mean y: 2515595.285714286
[2025-06-05 08:03:51] 2025-06-05 12:03:37,080 | INFO     | -- intersect: 4646927565.68942
[2025-06-05 08:03:51] 2025-06-05 12:03:37,081 | INFO     | intersect: 4646927565.68942
[2025-06-05 08:03:51] 2025-06-05 12:03:37,081 | INFO     | chi2: 1.8527816203528187
[2025-06-05 08:03:51] 2025-06-05 12:03:37,081 | INFO     | current chi2=1.8527816203528187 (change=29.245864614998712 %)
[2025-06-05 08:03:51] 2025-06-05 12:03:37,081 | INFO     | sum of square deviations: 2406935841.2525177
[2025-06-05 08:03:51] 2025-06-05 12:03:37,082 | INFO     | sum of deviations: -6805648606.575756
[2025-06-05 08:03:51] 2025-06-05 12:03:37,082 | INFO     | mean x: 1749118369.5353534
[2025-06-05 08:03:51] 2025-06-05 12:03:37,082 | INFO     | mean y: 2515662.9393939395
[2025-06-05 08:03:51] 2025-06-05 12:03:37,082 | INFO     | -- intersect: 4948175115.236972
[2025-06-05 08:03:51] 2025-06-05 12:03:37,082 | INFO     | intersect: 4948175115.236972
[2025-06-05 08:03:51] 2025-06-05 12:03:37,082 | INFO     | chi2: 1.8516700482686486
[2025-06-05 08:03:51] 2025-06-05 12:03:37,082 | INFO     | current chi2=1.8516700482686486 (change=0.059994770671270355 %)
[2025-06-05 08:03:51] 2025-06-05 12:03:37,082 | INFO     | right removable region: 197
[2025-06-05 08:03:51] 2025-06-05 12:03:37,083 | INFO     | sum of square deviations: 2593918988.7586155
[2025-06-05 08:03:51] 2025-06-05 12:03:37,083 | INFO     | sum of deviations: -56413363726.96547
[2025-06-05 08:03:51] 2025-06-05 12:03:37,083 | INFO     | mean x: 1749118827.0344827
[2025-06-05 08:03:51] 2025-06-05 12:03:37,083 | INFO     | mean y: 2532250.4236453203
[2025-06-05 08:03:51] 2025-06-05 12:03:37,083 | INFO     | -- intersect: 38042917096.21338
[2025-06-05 08:03:51] 2025-06-05 12:03:37,084 | INFO     | intersect: 38042917096.21338
[2025-06-05 08:03:51] 2025-06-05 12:03:37,084 | INFO     | chi2: 0.9917747671284918
[2025-06-05 08:03:51] 2025-06-05 12:03:37,084 | INFO     | current chi2=0.9917747671284918 (change=62.12604584696021 %)
[2025-06-05 08:03:51] 2025-06-05 12:03:37,084 | INFO     | sum of square deviations: 2406927301.2525177
[2025-06-05 08:03:51] 2025-06-05 12:03:37,085 | INFO     | sum of deviations: -53205035815.95958
[2025-06-05 08:03:51] 2025-06-05 12:03:37,085 | INFO     | mean x: 1749118979.5353534
[2025-06-05 08:03:51] 2025-06-05 12:03:37,085 | INFO     | mean y: 2529601.0656565656
[2025-06-05 08:03:51] 2025-06-05 12:03:37,085 | INFO     | -- intersect: 38666737657.58882
[2025-06-05 08:03:51] 2025-06-05 12:03:37,085 | INFO     | intersect: 38666737657.58882
[2025-06-05 08:03:51] 2025-06-05 12:03:37,085 | INFO     | chi2: 0.9822199706417692
[2025-06-05 08:03:51] 2025-06-05 12:03:37,085 | INFO     | current chi2=0.9822199706417692 (change=0.9634038698510902 %)
[2025-06-05 08:03:51] 2025-06-05 12:03:37,085 | INFO     | left removable region: 20
[2025-06-05 08:03:51] 2025-06-05 12:03:37,085 | INFO     | sum of square deviations: 1719430186.723162
[2025-06-05 08:03:51] 2025-06-05 12:03:37,086 | INFO     | sum of deviations: -26738693354.474594
[2025-06-05 08:03:51] 2025-06-05 12:03:37,086 | INFO     | mean x: 1749118949.039548
[2025-06-05 08:03:51] 2025-06-05 12:03:37,086 | INFO     | mean y: 2531134.0677966103
[2025-06-05 08:03:51] 2025-06-05 12:03:37,086 | INFO     | -- intersect: 27202911574.05564
[2025-06-05 08:03:51] 2025-06-05 12:03:37,086 | INFO     | intersect: 27202911574.05564
[2025-06-05 08:03:51] 2025-06-05 12:03:37,086 | INFO     | chi2: 0.1655603787491507
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | -- intersect: 27202911574.05564
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | current memory leak: -15.55 B/s (using 177 data points, chi2=0.17)
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | ..............................
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | . Timing measurements:
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | . get job = 0 s
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | . initial setup = 3 s
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | . payload setup = 19 s
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | . stage-in = 0 s
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | . payload execution = 12671 s
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | . stage-out = 2 s
[2025-06-05 08:03:51] 2025-06-05 12:03:37,087 | INFO     | . log creation = 0 s
[2025-06-05 08:03:51] 2025-06-05 12:03:37,088 | INFO     | ..............................
[2025-06-05 08:03:51] 2025-06-05 12:03:37,141 | INFO     | 
[2025-06-05 08:03:51] 2025-06-05 12:03:37,141 | INFO     | job summary report
[2025-06-05 08:03:51] 2025-06-05 12:03:37,141 | INFO     | --------------------------------------------------
[2025-06-05 08:03:51] 2025-06-05 12:03:37,141 | INFO     | PanDA job id: 6667885281
[2025-06-05 08:03:51] 2025-06-05 12:03:37,141 | INFO     | task id: 44871837
[2025-06-05 08:03:51] 2025-06-05 12:03:37,141 | INFO     | errors: (none)
[2025-06-05 08:03:51] 2025-06-05 12:03:37,141 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:03:51] 2025-06-05 12:03:37,141 | INFO     | pilot state: finished 
[2025-06-05 08:03:51] 2025-06-05 12:03:37,141 | INFO     | transexitcode: 0
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | exeerrorcode: 0
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | exeerrordiag: 
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | exitcode: 0
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | exitmsg: OK
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | cpuconsumptiontime: 73144 s
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | nevents: 400
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | neventsw: 0
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | pid: 40291
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | pgrp: 40291
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | corecount: 8
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | event service: False
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | sizes: {0: 2397391, 11: 2397391, 14: 2397625, 22: 2397653, 12694: 2427195, 12697: 2436136, 12699: 2436320, 12703: 2436490}
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | --------------------------------------------------
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | 
[2025-06-05 08:03:51] 2025-06-05 12:03:37,142 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 08:03:51] 2025-06-05 12:03:37,161 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,163 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:03:51] 2025-06-05 12:03:37,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,163 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:03:51] 2025-06-05 12:03:37,163 | INFO     | job 6667885281 has completed (purged errors)
[2025-06-05 08:03:51] 2025-06-05 12:03:37,163 | INFO     | overall cleanup function is called
[2025-06-05 08:03:51] 2025-06-05 12:03:38,170 | INFO     | --- collectZombieJob: --- 10, [40291]
[2025-06-05 08:03:51] 2025-06-05 12:03:38,170 | INFO     | zombie collector waiting for pid 40291
[2025-06-05 08:03:51] 2025-06-05 12:03:38,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:03:51] 2025-06-05 12:03:38,171 | INFO     | collected zombie processes
[2025-06-05 08:03:51] 2025-06-05 12:03:38,171 | INFO     | will attempt to kill all subprocesses of pid=40291
[2025-06-05 08:03:51] 2025-06-05 12:03:38,303 | INFO     | process IDs to be killed: [40291] (in reverse order)
[2025-06-05 08:03:51] 2025-06-05 12:03:38,366 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:03:51] 2025-06-05 12:03:38,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:03:51] 2025-06-05 12:03:38,369 | INFO     | did not find any defunct processes belonging to 40291
[2025-06-05 08:03:51] 2025-06-05 12:03:38,372 | INFO     | did not find any defunct processes belonging to 40291
[2025-06-05 08:03:51] 2025-06-05 12:03:38,372 | INFO     | ready for new job
[2025-06-05 08:03:51] 2025-06-05 12:03:38,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:03:51] 2025-06-05 12:03:38,373 | INFO     | **************************************
[2025-06-05 08:03:51] 2025-06-05 12:03:38,373 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:03:51] 2025-06-05 12:03:38,373 | INFO     | **************************************
[2025-06-05 08:03:51] 2025-06-05 12:03:38,373 | INFO     | 
[2025-06-05 08:03:51] 2025-06-05 12:03:38,375 | INFO     | architecture information:
[2025-06-05 08:03:51] 2025-06-05 12:03:38,375 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:03:51] 2025-06-05 12:03:38,385 | INFO     | cat /etc/os-release:
[2025-06-05 08:03:51] NAME="CentOS Linux"
[2025-06-05 08:03:51] VERSION="7 (Core)"
[2025-06-05 08:03:51] ID="centos"
[2025-06-05 08:03:51] ID_LIKE="rhel fedora"
[2025-06-05 08:03:51] VERSION_ID="7"
[2025-06-05 08:03:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:03:51] ANSI_COLOR="0;31"
[2025-06-05 08:03:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:03:51] HOME_URL="https://www.centos.org/"
[2025-06-05 08:03:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:03:51] 
[2025-06-05 08:03:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:03:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:03:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:03:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:03:51] 
[2025-06-05 08:03:51] 2025-06-05 12:03:38,386 | INFO     | **************************************
[2025-06-05 08:03:51] 2025-06-05 12:03:38,888 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 08:03:51] 2025-06-05 12:03:38,898 | INFO     | sufficient remaining disk space (57578356736 B)
[2025-06-05 08:03:51] 2025-06-05 12:03:38,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:03:51] 2025-06-05 12:03:38,899 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:03:51] 2025-06-05 12:03:38,899 | INFO     | update_server=False
[2025-06-05 08:03:51] 2025-06-05 12:03:38,899 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:03:51] 2025-06-05 12:03:38,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:03:51] 2025-06-05 12:03:38,904 | INFO     | all job control threads have been joined
[2025-06-05 08:03:51] 2025-06-05 12:03:38,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:03:51] 2025-06-05 12:03:38,985 | INFO     | aborting loop
[2025-06-05 08:03:51] 2025-06-05 12:03:39,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:03:51] 2025-06-05 12:03:39,141 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:03:51] 2025-06-05 12:03:39,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:03:51] 2025-06-05 12:03:39,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:03:51] 2025-06-05 12:03:39,407 | INFO     | all data control threads have been joined
[2025-06-05 08:03:51] 2025-06-05 12:03:39,905 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:39,906 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:39,909 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:39,909 | INFO     | [job] control thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:39,919 | INFO     | [job] validate thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:39,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:03:51] 2025-06-05 12:03:39,990 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:40,103 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:40,190 | INFO     | all payload control threads have been joined
[2025-06-05 08:03:51] 2025-06-05 12:03:40,412 | INFO     | [data] control thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:40,513 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:40,565 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:40,885 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:40,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:40,902 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:41,136 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:41,195 | INFO     | [payload] control thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:43,985 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:03:51] 2025-06-05 12:03:45,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520960345920)>', '<ExcThread(monitor, started 140520391177984)>']
[2025-06-05 08:03:51] 2025-06-05 12:03:46,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:03:51] 2025-06-05 12:03:46,175 | INFO     | [monitor] control thread has ended
[2025-06-05 08:03:51] 2025-06-05 12:03:50,683 | INFO     | all workflow threads have been joined
[2025-06-05 08:03:51] 2025-06-05 12:03:50,710 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:03:51] 2025-06-05 12:03:50,711 | INFO     | traces error code: 0
[2025-06-05 08:03:51] 2025-06-05 12:03:50,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:03:51] 2025-06-05 12:03:50,821 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:03:51] 2025-06-05 12:03:50,824 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:03:51] 2025-06-05 12:03:50,827 [wrapper] pilotpid: 32256
[2025-06-05 08:03:51] 2025-06-05 12:03:50,829 [wrapper] Pilot exit status: 0
[2025-06-05 08:03:51] 2025-06-05 12:03:50,870 [wrapper] pandaids: 6667885281
[2025-06-05 08:03:51] 2025-06-05 12:03:50,905 [wrapper] cleanup supervisor_pilot 32829 32257
[2025-06-05 08:03:51] 2025-06-05 12:03:50,907 [wrapper] Test setup, not cleaning
[2025-06-05 08:03:51] 2025-06-05 12:03:50,910 [wrapper] apfmon messages muted
[2025-06-05 08:03:51] 2025-06-05 12:03:50,912 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:03:51] 2025-06-05 12:03:50,914 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:03:51]  *** Error codes and diagnostics ***
[2025-06-05 08:03:51]     "exeErrorCode": 0,
[2025-06-05 08:03:51]     "exeErrorDiag": "",
[2025-06-05 08:03:51]     "pilotErrorCode": 0,
[2025-06-05 08:03:51]     "pilotErrorDiag": "",
[2025-06-05 08:03:51]  *** Listing of results directory ***
[2025-06-05 08:03:51] total 423196
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas    495897 May 27 21:31 pilot3.tar.gz
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas      5111 May 27 22:25 queuedata.json
[2025-06-05 08:03:51] -rwx------ 1 boincer umatlas     37140 May 27 22:28 runpilot2-wrapper.sh
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas       100 Jun  5 04:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:03:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 04:30 run_atlas
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas       105 Jun  5 04:30 job.xml
[2025-06-05 08:03:51] -rw-r--r-- 2 boincer umatlas 226589033 Jun  5 04:30 EVNT.44871834._003028.pool.root.1
[2025-06-05 08:03:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 04:30 start_atlas.sh
[2025-06-05 08:03:51] drwxrwx--x 2 boincer umatlas      4096 Jun  5 04:30 shared
[2025-06-05 08:03:51] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 04:30 input.tar.gz
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas         0 Jun  5 04:30 boinc_lockfile
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 04:30 pandaJob.out
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas    983281 Jun  5 04:31 agis_schedconf.cvmfs.json
[2025-06-05 08:03:51] drwx------ 4 boincer umatlas      4096 Jun  5 04:31 pilot3
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas      6132 Jun  5 08:02 init_data.xml
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas 199842704 Jun  5 08:02 HITS.44871837._077405.pool.root.1
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas       531 Jun  5 08:03 boinc_task_state.xml
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas        95 Jun  5 08:03 pilot_heartbeat.json
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas      1059 Jun  5 08:03 memory_monitor_summary.json
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas   1598969 Jun  5 08:03 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas    396152 Jun  5 08:03 log.44871837._077405.job.log.tgz.1
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas      7749 Jun  5 08:03 heartbeat.json
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas        28 Jun  5 08:03 wrapper_checkpoint.txt
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 08:03 boinc_mmap_file
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas      4353 Jun  5 08:03 pilotlog.txt
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas   1150923 Jun  5 08:03 log.44871837._077405.job.log.1
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas       357 Jun  5 08:03 output.list
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas       620 Jun  5 08:03 runtime_log
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas   1566720 Jun  5 08:03 result.tar.gz
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas       661 Jun  5 08:03 WuhLDmjhLe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMnSKDmwkg2ym.diag
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas      8655 Jun  5 08:03 runtime_log.err
[2025-06-05 08:03:51] -rw-r--r-- 1 boincer umatlas     20877 Jun  5 08:03 stderr.txt
[2025-06-05 08:03:51] HITS file was successfully produced:
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas 199842704 Jun  5 08:02 shared/HITS.pool.root.1
[2025-06-05 08:03:51]  *** Contents of shared directory: ***
[2025-06-05 08:03:51] total 418492
[2025-06-05 08:03:51] -rw-r--r-- 2 boincer umatlas 226589033 Jun  5 04:30 ATLAS.root_0
[2025-06-05 08:03:51] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 04:30 start_atlas.sh
[2025-06-05 08:03:51] -rw-r--r-- 2 boincer umatlas    508877 Jun  5 04:30 input.tar.gz
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas 199842704 Jun  5 08:02 HITS.pool.root.1
[2025-06-05 08:03:51] -rw------- 1 boincer umatlas   1566720 Jun  5 08:03 result.tar.gz
08:03:52 (28542): run_atlas exited; CPU time 73385.527324
08:03:52 (28542): called boinc_finish(0)

</stderr_txt>
]]>

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