Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:28:47 (2985229): wrapper (7.7.26015): starting
04:28:47 (2985229): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:28:47] Arguments: --nthreads 8
[2025-06-05 04:28:47] Threads: 8
[2025-06-05 04:28:47] Checking for CVMFS
[2025-06-05 04:28:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:28:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:28:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:28:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:28:48] 2.12.6.0 7995 2538 161072 146812 0 65 27876932 32935936 19194 16776704 0 22044191 99.947 2451208 35321 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 04:28:48] CVMFS is ok
[2025-06-05 04:28:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:28:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:28:48] Further information can be found at the LHC@home message board.
[2025-06-05 04:28:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:28:48] Checking for apptainer binary...
[2025-06-05 04:28:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:28:48] Running /usr/bin/apptainer --version
[2025-06-05 04:28:48] apptainer version 1.4.1-1.el9
[2025-06-05 04:28:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:28:49] c6-8-25-2.aglt2.org
[2025-06-05 04:28:49] apptainer works
[2025-06-05 04:28:49] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:28:49] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:28:49] Starting ATLAS job with PandaID=6668688782
[2025-06-05 04:28:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:53:19]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:53:19] 2025-06-05 10:53:03,261 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 06:53:19] 2025-06-05 10:53:05,134 | INFO     | monitor loop #602: job 0:6668688782 is in state 'finished'
[2025-06-05 06:53:19] 2025-06-05 10:53:05,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 06:53:19] 2025-06-05 10:53:07,638 | INFO     | monitor loop #603: job 0:6668688782 is in state 'finished'
[2025-06-05 06:53:19] 2025-06-05 10:53:07,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 06:53:19] 2025-06-05 10:53:07,650 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 06:53:19] 2025-06-05 10:53:07,650 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668688782/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 06:53:19] 2025-06-05 10:53:07,651 | INFO     | extracted standard info from prmon json
[2025-06-05 06:53:19] 2025-06-05 10:53:07,651 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:53:19] 2025-06-05 10:53:07,652 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:53:19] 2025-06-05 10:53:07,652 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:53:19] 2025-06-05 10:53:07,652 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:53:19] 2025-06-05 10:53:07,655 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:53:19] 2025-06-05 10:53:07,655 | INFO     | sum of square deviations: 850825255.0
[2025-06-05 06:53:19] 2025-06-05 10:53:07,656 | INFO     | sum of deviations: -17998958503.5
[2025-06-05 06:53:19] 2025-06-05 10:53:07,656 | INFO     | mean x: 1749116481.5
[2025-06-05 06:53:19] 2025-06-05 10:53:07,656 | INFO     | mean y: 2274978.6642857143
[2025-06-05 06:53:19] 2025-06-05 10:53:07,656 | INFO     | -- intersect: 37004320678.76098
[2025-06-05 06:53:19] 2025-06-05 10:53:07,656 | INFO     | intersect: 37004320678.76098
[2025-06-05 06:53:19] 2025-06-05 10:53:07,657 | INFO     | chi2: 2.0646187091444133
[2025-06-05 06:53:19] 2025-06-05 10:53:07,657 | INFO     | sum of square deviations: 762879420.0
[2025-06-05 06:53:19] 2025-06-05 10:53:07,658 | INFO     | sum of deviations: -15588431599.000002
[2025-06-05 06:53:19] 2025-06-05 10:53:07,658 | INFO     | mean x: 1749116329.0
[2025-06-05 06:53:19] 2025-06-05 10:53:07,658 | INFO     | mean y: 2279119.762962963
[2025-06-05 06:53:19] 2025-06-05 10:53:07,658 | INFO     | -- intersect: 35743157086.17931
[2025-06-05 06:53:19] 2025-06-05 10:53:07,658 | INFO     | intersect: 35743157086.17931
[2025-06-05 06:53:19] 2025-06-05 10:53:07,658 | INFO     | chi2: 2.0636566147035635
[2025-06-05 06:53:19] 2025-06-05 10:53:07,658 | INFO     | current chi2=2.0636566147035635 (change=0.046599134096213364 %)
[2025-06-05 06:53:19] 2025-06-05 10:53:07,658 | INFO     | right removable region: 134
[2025-06-05 06:53:19] 2025-06-05 10:53:07,659 | INFO     | sum of square deviations: 762879420.0
[2025-06-05 06:53:19] 2025-06-05 10:53:07,659 | INFO     | sum of deviations: -39038649581.99999
[2025-06-05 06:53:19] 2025-06-05 10:53:07,660 | INFO     | mean x: 1749116634.0
[2025-06-05 06:53:19] 2025-06-05 10:53:07,660 | INFO     | mean y: 2310970.274074074
[2025-06-05 06:53:19] 2025-06-05 10:53:07,660 | INFO     | -- intersect: 89509446125.09755
[2025-06-05 06:53:19] 2025-06-05 10:53:07,660 | INFO     | intersect: 89509446125.09755
[2025-06-05 06:53:19] 2025-06-05 10:53:07,661 | INFO     | chi2: 0.4002538146950631
[2025-06-05 06:53:19] 2025-06-05 10:53:07,661 | INFO     | current chi2=0.4002538146950631 (change=80.61366910401921 %)
[2025-06-05 06:53:19] 2025-06-05 10:53:07,661 | INFO     | sum of square deviations: 681212772.5
[2025-06-05 06:53:19] 2025-06-05 10:53:07,661 | INFO     | sum of deviations: -38656156615.50001
[2025-06-05 06:53:19] 2025-06-05 10:53:07,662 | INFO     | mean x: 1749116786.5
[2025-06-05 06:53:19] 2025-06-05 10:53:07,662 | INFO     | mean y: 2310161.4384615384
[2025-06-05 06:53:19] 2025-06-05 10:53:07,662 | INFO     | -- intersect: 99257836727.1035
[2025-06-05 06:53:19] 2025-06-05 10:53:07,662 | INFO     | intersect: 99257836727.1035
[2025-06-05 06:53:19] 2025-06-05 10:53:07,662 | INFO     | chi2: 0.3557036719191884
[2025-06-05 06:53:19] 2025-06-05 10:53:07,662 | INFO     | current chi2=0.3557036719191884 (change=11.130472999942707 %)
[2025-06-05 06:53:19] 2025-06-05 10:53:07,662 | INFO     | left removable region: 20
[2025-06-05 06:53:19] 2025-06-05 10:53:07,662 | INFO     | sum of square deviations: 459366752.5
[2025-06-05 06:53:19] 2025-06-05 10:53:07,663 | INFO     | sum of deviations: -27547659871.5
[2025-06-05 06:53:19] 2025-06-05 10:53:07,663 | INFO     | mean x: 1749116908.5
[2025-06-05 06:53:19] 2025-06-05 10:53:07,663 | INFO     | mean y: 2298548.8859649124
[2025-06-05 06:53:19] 2025-06-05 10:53:07,663 | INFO     | -- intersect: 104894690975.23509
[2025-06-05 06:53:19] 2025-06-05 10:53:07,663 | INFO     | intersect: 104894690975.23509
[2025-06-05 06:53:19] 2025-06-05 10:53:07,664 | INFO     | chi2: 0.3345165446055312
[2025-06-05 06:53:19] 2025-06-05 10:53:07,664 | INFO     | -- intersect: 104894690975.23509
[2025-06-05 06:53:19] 2025-06-05 10:53:07,664 | INFO     | current memory leak: -59.97 B/s (using 114 data points, chi2=0.33)
[2025-06-05 06:53:19] 2025-06-05 10:53:07,664 | INFO     | ..............................
[2025-06-05 06:53:19] 2025-06-05 10:53:07,664 | INFO     | . Timing measurements:
[2025-06-05 06:53:19] 2025-06-05 10:53:07,665 | INFO     | . get job = 0 s
[2025-06-05 06:53:19] 2025-06-05 10:53:07,665 | INFO     | . initial setup = 3 s
[2025-06-05 06:53:19] 2025-06-05 10:53:07,665 | INFO     | . payload setup = 18 s
[2025-06-05 06:53:19] 2025-06-05 10:53:07,665 | INFO     | . stage-in = 0 s
[2025-06-05 06:53:19] 2025-06-05 10:53:07,665 | INFO     | . payload execution = 8552 s
[2025-06-05 06:53:19] 2025-06-05 10:53:07,665 | INFO     | . stage-out = 0 s
[2025-06-05 06:53:19] 2025-06-05 10:53:07,665 | INFO     | . log creation = 0 s
[2025-06-05 06:53:19] 2025-06-05 10:53:07,665 | INFO     | ..............................
[2025-06-05 06:53:19] 2025-06-05 10:53:07,763 | INFO     | 
[2025-06-05 06:53:19] 2025-06-05 10:53:07,763 | INFO     | job summary report
[2025-06-05 06:53:19] 2025-06-05 10:53:07,763 | INFO     | --------------------------------------------------
[2025-06-05 06:53:19] 2025-06-05 10:53:07,763 | INFO     | PanDA job id: 6668688782
[2025-06-05 06:53:19] 2025-06-05 10:53:07,763 | INFO     | task id: 44871837
[2025-06-05 06:53:19] 2025-06-05 10:53:07,763 | INFO     | errors: (none)
[2025-06-05 06:53:19] 2025-06-05 10:53:07,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:53:19] 2025-06-05 10:53:07,763 | INFO     | pilot state: finished 
[2025-06-05 06:53:19] 2025-06-05 10:53:07,763 | INFO     | transexitcode: 0
[2025-06-05 06:53:19] 2025-06-05 10:53:07,763 | INFO     | exeerrorcode: 0
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | exeerrordiag: 
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | exitcode: 0
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | exitmsg: OK
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | cpuconsumptiontime: 51855 s
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | nevents: 400
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | neventsw: 0
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | pid: 2999548
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | pgrp: 2999548
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | corecount: 8
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | event service: False
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | sizes: {0: 2397392, 1: 2397420, 12: 2397420, 18: 2397654, 22: 2397682, 8574: 2425786, 8576: 2434727, 8578: 2434783, 8583: 2434953}
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | --------------------------------------------------
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | 
[2025-06-05 06:53:19] 2025-06-05 10:53:07,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 06:53:19] 2025-06-05 10:53:07,788 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,788 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,791 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,791 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,791 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,791 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:53:19] 2025-06-05 10:53:07,791 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,791 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:53:19] 2025-06-05 10:53:07,791 | INFO     | job 6668688782 has completed (purged errors)
[2025-06-05 06:53:19] 2025-06-05 10:53:07,791 | INFO     | overall cleanup function is called
[2025-06-05 06:53:19] 2025-06-05 10:53:08,800 | INFO     | --- collectZombieJob: --- 10, [2999548]
[2025-06-05 06:53:19] 2025-06-05 10:53:08,801 | INFO     | zombie collector waiting for pid 2999548
[2025-06-05 06:53:19] 2025-06-05 10:53:08,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:53:19] 2025-06-05 10:53:08,801 | INFO     | collected zombie processes
[2025-06-05 06:53:19] 2025-06-05 10:53:08,801 | INFO     | will attempt to kill all subprocesses of pid=2999548
[2025-06-05 06:53:19] 2025-06-05 10:53:09,127 | INFO     | process IDs to be killed: [2999548] (in reverse order)
[2025-06-05 06:53:19] 2025-06-05 10:53:09,236 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:53:19] 2025-06-05 10:53:09,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:53:19] 2025-06-05 10:53:09,249 | INFO     | did not find any defunct processes belonging to 2999548
[2025-06-05 06:53:19] 2025-06-05 10:53:09,261 | INFO     | did not find any defunct processes belonging to 2999548
[2025-06-05 06:53:19] 2025-06-05 10:53:09,261 | INFO     | ready for new job
[2025-06-05 06:53:19] 2025-06-05 10:53:09,261 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:53:19] 2025-06-05 10:53:09,263 | INFO     | **************************************
[2025-06-05 06:53:19] 2025-06-05 10:53:09,263 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:53:19] 2025-06-05 10:53:09,263 | INFO     | **************************************
[2025-06-05 06:53:19] 2025-06-05 10:53:09,263 | INFO     | 
[2025-06-05 06:53:19] 2025-06-05 10:53:09,281 | INFO     | architecture information:
[2025-06-05 06:53:19] 2025-06-05 10:53:09,281 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:53:19] 2025-06-05 10:53:09,297 | INFO     | cat /etc/os-release:
[2025-06-05 06:53:19] NAME="CentOS Linux"
[2025-06-05 06:53:19] VERSION="7 (Core)"
[2025-06-05 06:53:19] ID="centos"
[2025-06-05 06:53:19] ID_LIKE="rhel fedora"
[2025-06-05 06:53:19] VERSION_ID="7"
[2025-06-05 06:53:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:53:19] ANSI_COLOR="0;31"
[2025-06-05 06:53:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:53:19] HOME_URL="https://www.centos.org/"
[2025-06-05 06:53:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:53:19] 
[2025-06-05 06:53:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:53:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:53:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:53:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:53:19] 
[2025-06-05 06:53:19] 2025-06-05 10:53:09,298 | INFO     | **************************************
[2025-06-05 06:53:19] 2025-06-05 10:53:09,800 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 06:53:19] 2025-06-05 10:53:09,820 | INFO     | sufficient remaining disk space (76612108288 B)
[2025-06-05 06:53:19] 2025-06-05 10:53:09,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:53:19] 2025-06-05 10:53:09,820 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:53:19] 2025-06-05 10:53:09,820 | INFO     | update_server=False
[2025-06-05 06:53:19] 2025-06-05 10:53:09,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:53:19] 2025-06-05 10:53:09,821 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 06:53:19] 2025-06-05 10:53:09,821 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:53:19] 2025-06-05 10:53:09,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:53:19] 2025-06-05 10:53:09,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:53:19] 2025-06-05 10:53:09,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:53:19] 2025-06-05 10:53:10,030 | INFO     | all payload control threads have been joined
[2025-06-05 06:53:19] 2025-06-05 10:53:10,142 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 06:53:19] 2025-06-05 10:53:10,142 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 06:53:19] 2025-06-05 10:53:10,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:53:19] 2025-06-05 10:53:10,142 | INFO     | will abort loop
[2025-06-05 06:53:19] 2025-06-05 10:53:10,732 | INFO     | all data control threads have been joined
[2025-06-05 06:53:19] 2025-06-05 10:53:10,826 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:10,879 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:10,920 | INFO     | all job control threads have been joined
[2025-06-05 06:53:19] 2025-06-05 10:53:11,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:53:19] 2025-06-05 10:53:11,036 | INFO     | [payload] control thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:11,149 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:11,271 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:11,329 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:11,543 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:11,582 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:11,737 | INFO     | [data] control thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:11,777 | INFO     | [job] validate thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:11,926 | INFO     | [job] control thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:12,222 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:12,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:12,774 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:53:19] 2025-06-05 10:53:13,023 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:13,779 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:13,827 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:53:19] 2025-06-05 10:53:14,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041551382336)>', '<ExcThread(monitor, started 140040747341568)>']
[2025-06-05 06:53:19] 2025-06-05 10:53:14,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:53:19] 2025-06-05 10:53:14,847 | INFO     | [monitor] control thread has ended
[2025-06-05 06:53:19] 2025-06-05 10:53:19,468 | INFO     | all workflow threads have been joined
[2025-06-05 06:53:19] 2025-06-05 10:53:19,468 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:53:19] 2025-06-05 10:53:19,468 | INFO     | traces error code: 0
[2025-06-05 06:53:19] 2025-06-05 10:53:19,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:53:19] 2025-06-05 10:53:19,614 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:53:19] 2025-06-05 10:53:19,617 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:53:19] 2025-06-05 10:53:19,619 [wrapper] pilotpid: 2988957
[2025-06-05 06:53:19] 2025-06-05 10:53:19,621 [wrapper] Pilot exit status: 0
[2025-06-05 06:53:19] 2025-06-05 10:53:19,630 [wrapper] pandaids: 6668688782
[2025-06-05 06:53:19] 2025-06-05 10:53:19,693 [wrapper] cleanup supervisor_pilot 3343895 2988958
[2025-06-05 06:53:19] 2025-06-05 10:53:19,696 [wrapper] Test setup, not cleaning
[2025-06-05 06:53:19] 2025-06-05 10:53:19,698 [wrapper] apfmon messages muted
[2025-06-05 06:53:19] 2025-06-05 10:53:19,700 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:53:19] 2025-06-05 10:53:19,702 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:53:19]  *** Error codes and diagnostics ***
[2025-06-05 06:53:19]     "exeErrorCode": 0,
[2025-06-05 06:53:19]     "exeErrorDiag": "",
[2025-06-05 06:53:19]     "pilotErrorCode": 0,
[2025-06-05 06:53:19]     "pilotErrorDiag": "",
[2025-06-05 06:53:19]  *** Listing of results directory ***
[2025-06-05 06:53:19] total 421740
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas    495897 May 28 12:21 pilot3.tar.gz
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas      5111 May 28 12:36 queuedata.json
[2025-06-05 06:53:19] -rwx------. 1 boincer umatlas     37140 May 28 12:36 runpilot2-wrapper.sh
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas       100 Jun  5 04:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:53:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 04:28 run_atlas
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas       105 Jun  5 04:28 job.xml
[2025-06-05 06:53:19] -rw-r--r--. 2 boincer umatlas 225932674 Jun  5 04:28 EVNT.44871834._003392.pool.root.1
[2025-06-05 06:53:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 04:28 start_atlas.sh
[2025-06-05 06:53:19] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 04:28 shared
[2025-06-05 06:53:19] -rw-r--r--. 2 boincer umatlas    508876 Jun  5 04:28 input.tar.gz
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas         0 Jun  5 04:28 boinc_lockfile
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 04:28 pandaJob.out
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas    983281 Jun  5 04:29 agis_schedconf.cvmfs.json
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas   1598969 Jun  5 04:29 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:53:19] drwx------. 4 boincer umatlas      4096 Jun  5 04:29 pilot3
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas      6852 Jun  5 06:47 init_data.xml
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas 199853514 Jun  5 06:52 HITS.44871837._087081.pool.root.1
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas       530 Jun  5 06:52 boinc_task_state.xml
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas      1041 Jun  5 06:52 memory_monitor_summary.json
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas    336436 Jun  5 06:53 log.44871837._087081.job.log.tgz.1
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas        27 Jun  5 06:53 wrapper_checkpoint.txt
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 06:53 boinc_mmap_file
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas      7725 Jun  5 06:53 heartbeat.json
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas        95 Jun  5 06:53 pilot_heartbeat.json
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas      4662 Jun  5 06:53 pilotlog.txt
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas    785999 Jun  5 06:53 log.44871837._087081.job.log.1
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas       357 Jun  5 06:53 output.list
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas       620 Jun  5 06:53 runtime_log
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas   1146880 Jun  5 06:53 result.tar.gz
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas      8664 Jun  5 06:53 runtime_log.err
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas       654 Jun  5 06:53 8JEODmRwYe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVmTKDmf1E7Go.diag
[2025-06-05 06:53:19] -rw-r--r--. 1 boincer umatlas     21191 Jun  5 06:53 stderr.txt
[2025-06-05 06:53:19] HITS file was successfully produced:
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas 199853514 Jun  5 06:52 shared/HITS.pool.root.1
[2025-06-05 06:53:19]  *** Contents of shared directory: ***
[2025-06-05 06:53:19] total 417448
[2025-06-05 06:53:19] -rw-r--r--. 2 boincer umatlas 225932674 Jun  5 04:28 ATLAS.root_0
[2025-06-05 06:53:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 04:28 start_atlas.sh
[2025-06-05 06:53:19] -rw-r--r--. 2 boincer umatlas    508876 Jun  5 04:28 input.tar.gz
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas 199853514 Jun  5 06:52 HITS.pool.root.1
[2025-06-05 06:53:19] -rw-------. 1 boincer umatlas   1146880 Jun  5 06:53 result.tar.gz
06:53:21 (2985229): run_atlas exited; CPU time 52156.866783
06:53:21 (2985229): called boinc_finish(0)

</stderr_txt>
]]>

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