Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:22:44 (3301642): wrapper (7.7.26015): starting
06:22:44 (3301642): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 06:22:44] Arguments: --nthreads 12
[2025-06-05 06:22:44] Threads: 12
[2025-06-05 06:22:44] Checking for CVMFS
[2025-06-05 06:22:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:22:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:22:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:22:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:22:44] 2.12.6.0 2658689 24586 501376 146816 2 195 31619087 32935937 9182 16776704 1 97297730 99.591 119253031 34406 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 06:22:44] CVMFS is ok
[2025-06-05 06:22:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 06:22:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 06:22:44] Further information can be found at the LHC@home message board.
[2025-06-05 06:22:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:22:44] Checking for apptainer binary...
[2025-06-05 06:22:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:22:44] Running /usr/bin/apptainer --version
[2025-06-05 06:22:44] apptainer version 1.4.1-1.el9
[2025-06-05 06:22:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:22:44] c6-5-7-2.aglt2.org
[2025-06-05 06:22:44] apptainer works
[2025-06-05 06:22:44] Set ATHENA_PROC_NUMBER=12
[2025-06-05 06:22:44] Set ATHENA_CORE_NUMBER=12
[2025-06-05 06:22:44] Starting ATLAS job with PandaID=6668531310
[2025-06-05 06:22:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:48:55]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:48:55] 2025-06-05 12:48:30,446 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:48:55] 2025-06-05 12:48:30,945 | INFO     | PID=3305554 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 08:48:55] 2025-06-05 12:48:30,945 | INFO     | .. there are 15 such processes running
[2025-06-05 08:48:55] 2025-06-05 12:48:32,951 | INFO     | monitor loop #588: job 0:6668531310 is in state 'finished'
[2025-06-05 08:48:55] 2025-06-05 12:48:32,951 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:48:55] 2025-06-05 12:48:35,454 | INFO     | monitor loop #589: job 0:6668531310 is in state 'finished'
[2025-06-05 08:48:55] 2025-06-05 12:48:35,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:48:55] 2025-06-05 12:48:35,843 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 08:48:55] 2025-06-05 12:48:35,844 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668531310/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:48:55] 2025-06-05 12:48:35,844 | INFO     | extracted standard info from prmon json
[2025-06-05 08:48:55] 2025-06-05 12:48:35,845 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:48:55] 2025-06-05 12:48:35,845 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:48:55] 2025-06-05 12:48:35,852 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:48:55] 2025-06-05 12:48:35,852 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:48:55] 2025-06-05 12:48:35,878 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:48:55] 2025-06-05 12:48:35,879 | INFO     | sum of square deviations: 906749276.97902
[2025-06-05 08:48:55] 2025-06-05 12:48:35,880 | INFO     | sum of deviations: -33497147673.41957
[2025-06-05 08:48:55] 2025-06-05 12:48:35,880 | INFO     | mean x: 1749123326.1188812
[2025-06-05 08:48:55] 2025-06-05 12:48:35,880 | INFO     | mean y: 2536207.3776223776
[2025-06-05 08:48:55] 2025-06-05 12:48:35,880 | INFO     | -- intersect: 64618680759.74061
[2025-06-05 08:48:55] 2025-06-05 12:48:35,880 | INFO     | intersect: 64618680759.74061
[2025-06-05 08:48:55] 2025-06-05 12:48:35,881 | INFO     | chi2: 1.9460637203880753
[2025-06-05 08:48:55] 2025-06-05 12:48:35,881 | INFO     | sum of square deviations: 814921004.6449295
[2025-06-05 08:48:55] 2025-06-05 12:48:35,904 | INFO     | sum of deviations: -29241059892.35506
[2025-06-05 08:48:55] 2025-06-05 12:48:35,904 | INFO     | mean x: 1749123173.615942
[2025-06-05 08:48:55] 2025-06-05 12:48:35,904 | INFO     | mean y: 2543251.615942029
[2025-06-05 08:48:55] 2025-06-05 12:48:35,904 | INFO     | -- intersect: 62764719201.53506
[2025-06-05 08:48:55] 2025-06-05 12:48:35,904 | INFO     | intersect: 62764719201.53506
[2025-06-05 08:48:55] 2025-06-05 12:48:35,905 | INFO     | chi2: 1.9464889336930276
[2025-06-05 08:48:55] 2025-06-05 12:48:35,905 | INFO     | current chi2=1.9464889336930276 (change=-0.021849916860249126 %)
[2025-06-05 08:48:55] 2025-06-05 12:48:35,905 | INFO     | right removable region: 137
[2025-06-05 08:48:55] 2025-06-05 12:48:35,905 | INFO     | sum of square deviations: 814919114.405798
[2025-06-05 08:48:55] 2025-06-05 12:48:35,906 | INFO     | sum of deviations: -57664317503.260864
[2025-06-05 08:48:55] 2025-06-05 12:48:35,906 | INFO     | mean x: 1749123478.6231885
[2025-06-05 08:48:55] 2025-06-05 12:48:35,906 | INFO     | mean y: 2575885.9565217393
[2025-06-05 08:48:55] 2025-06-05 12:48:35,906 | INFO     | -- intersect: 123771928991.97572
[2025-06-05 08:48:55] 2025-06-05 12:48:35,906 | INFO     | intersect: 123771928991.97572
[2025-06-05 08:48:55] 2025-06-05 12:48:35,906 | INFO     | chi2: 0.282958146974799
[2025-06-05 08:48:55] 2025-06-05 12:48:35,906 | INFO     | current chi2=0.282958146974799 (change=85.45997523049384 %)
[2025-06-05 08:48:55] 2025-06-05 12:48:35,906 | INFO     | sum of square deviations: 729507676.8270662
[2025-06-05 08:48:55] 2025-06-05 12:48:35,907 | INFO     | sum of deviations: -54566897259.51129
[2025-06-05 08:48:55] 2025-06-05 12:48:35,907 | INFO     | mean x: 1749123631.1278195
[2025-06-05 08:48:55] 2025-06-05 12:48:35,907 | INFO     | mean y: 2570324.030075188
[2025-06-05 08:48:55] 2025-06-05 12:48:35,907 | INFO     | -- intersect: 130836353854.67363
[2025-06-05 08:48:55] 2025-06-05 12:48:35,919 | INFO     | intersect: 130836353854.67363
[2025-06-05 08:48:55] 2025-06-05 12:48:35,920 | INFO     | chi2: 0.2675247410837554
[2025-06-05 08:48:55] 2025-06-05 12:48:35,920 | INFO     | current chi2=0.2675247410837554 (change=5.454306955303225 %)
[2025-06-05 08:48:55] 2025-06-05 12:48:35,920 | INFO     | left removable region: 20
[2025-06-05 08:48:55] 2025-06-05 12:48:35,920 | INFO     | sum of square deviations: 496621143.811965
[2025-06-05 08:48:55] 2025-06-05 12:48:35,921 | INFO     | sum of deviations: -41419237214.22224
[2025-06-05 08:48:55] 2025-06-05 12:48:35,921 | INFO     | mean x: 1749123753.1367521
[2025-06-05 08:48:55] 2025-06-05 12:48:35,921 | INFO     | mean y: 2563471.888888889
[2025-06-05 08:48:55] 2025-06-05 12:48:35,921 | INFO     | -- intersect: 145883125648.74313
[2025-06-05 08:48:55] 2025-06-05 12:48:35,921 | INFO     | intersect: 145883125648.74313
[2025-06-05 08:48:55] 2025-06-05 12:48:35,921 | INFO     | chi2: 0.24917750233913025
[2025-06-05 08:48:55] 2025-06-05 12:48:35,921 | INFO     | -- intersect: 145883125648.74313
[2025-06-05 08:48:55] 2025-06-05 12:48:35,921 | INFO     | current memory leak: -83.40 B/s (using 117 data points, chi2=0.25)
[2025-06-05 08:48:55] 2025-06-05 12:48:35,922 | INFO     | ..............................
[2025-06-05 08:48:55] 2025-06-05 12:48:35,922 | INFO     | . Timing measurements:
[2025-06-05 08:48:55] 2025-06-05 12:48:35,922 | INFO     | . get job = 0 s
[2025-06-05 08:48:55] 2025-06-05 12:48:35,922 | INFO     | . initial setup = 2 s
[2025-06-05 08:48:55] 2025-06-05 12:48:35,922 | INFO     | . payload setup = 5 s
[2025-06-05 08:48:55] 2025-06-05 12:48:35,922 | INFO     | . stage-in = 0 s
[2025-06-05 08:48:55] 2025-06-05 12:48:35,922 | INFO     | . payload execution = 8706 s
[2025-06-05 08:48:55] 2025-06-05 12:48:35,922 | INFO     | . stage-out = 1 s
[2025-06-05 08:48:55] 2025-06-05 12:48:35,923 | INFO     | . log creation = 0 s
[2025-06-05 08:48:55] 2025-06-05 12:48:35,923 | INFO     | ..............................
[2025-06-05 08:48:55] 2025-06-05 12:48:36,138 | INFO     | 
[2025-06-05 08:48:55] 2025-06-05 12:48:36,138 | INFO     | job summary report
[2025-06-05 08:48:55] 2025-06-05 12:48:36,138 | INFO     | --------------------------------------------------
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | PanDA job id: 6668531310
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | task id: 44871837
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | errors: (none)
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | pilot state: finished 
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | transexitcode: 0
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | exeerrorcode: 0
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | exeerrordiag: 
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | exitcode: 0
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | exitmsg: OK
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | cpuconsumptiontime: 49216 s
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | nevents: 400
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | neventsw: 0
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | pid: 3315322
[2025-06-05 08:48:55] 2025-06-05 12:48:36,139 | INFO     | pgrp: 3315322
[2025-06-05 08:48:55] 2025-06-05 12:48:36,140 | INFO     | corecount: 12
[2025-06-05 08:48:55] 2025-06-05 12:48:36,140 | INFO     | event service: False
[2025-06-05 08:48:55] 2025-06-05 12:48:36,140 | INFO     | sizes: {0: 2397391, 4: 2397597, 11: 2397625, 8715: 2425529, 8716: 2425528, 8717: 2434525, 8718: 2434709, 8729: 2434879}
[2025-06-05 08:48:55] 2025-06-05 12:48:36,140 | INFO     | --------------------------------------------------
[2025-06-05 08:48:55] 2025-06-05 12:48:36,140 | INFO     | 
[2025-06-05 08:48:55] 2025-06-05 12:48:36,140 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 08:48:55] 2025-06-05 12:48:36,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,197 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:48:55] 2025-06-05 12:48:36,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:48:55] 2025-06-05 12:48:36,199 | INFO     | job 6668531310 has completed (purged errors)
[2025-06-05 08:48:55] 2025-06-05 12:48:36,199 | INFO     | overall cleanup function is called
[2025-06-05 08:48:55] 2025-06-05 12:48:37,211 | INFO     | --- collectZombieJob: --- 10, [3315322]
[2025-06-05 08:48:55] 2025-06-05 12:48:37,212 | INFO     | zombie collector waiting for pid 3315322
[2025-06-05 08:48:55] 2025-06-05 12:48:37,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:48:55] 2025-06-05 12:48:37,212 | INFO     | collected zombie processes
[2025-06-05 08:48:55] 2025-06-05 12:48:37,212 | INFO     | will attempt to kill all subprocesses of pid=3315322
[2025-06-05 08:48:55] 2025-06-05 12:48:37,457 | INFO     | process IDs to be killed: [3315322] (in reverse order)
[2025-06-05 08:48:55] 2025-06-05 12:48:37,541 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:48:55] 2025-06-05 12:48:37,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:48:55] 2025-06-05 12:48:37,554 | INFO     | did not find any defunct processes belonging to 3315322
[2025-06-05 08:48:55] 2025-06-05 12:48:37,568 | INFO     | did not find any defunct processes belonging to 3315322
[2025-06-05 08:48:55] 2025-06-05 12:48:37,569 | INFO     | ready for new job
[2025-06-05 08:48:55] 2025-06-05 12:48:37,569 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:48:55] 2025-06-05 12:48:37,572 | INFO     | **************************************
[2025-06-05 08:48:55] 2025-06-05 12:48:37,573 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:48:55] 2025-06-05 12:48:37,573 | INFO     | **************************************
[2025-06-05 08:48:55] 2025-06-05 12:48:37,573 | INFO     | 
[2025-06-05 08:48:55] 2025-06-05 12:48:37,589 | INFO     | architecture information:
[2025-06-05 08:48:55] 2025-06-05 12:48:37,590 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:48:55] 2025-06-05 12:48:37,625 | INFO     | cat /etc/os-release:
[2025-06-05 08:48:55] NAME="CentOS Linux"
[2025-06-05 08:48:55] VERSION="7 (Core)"
[2025-06-05 08:48:55] ID="centos"
[2025-06-05 08:48:55] ID_LIKE="rhel fedora"
[2025-06-05 08:48:55] VERSION_ID="7"
[2025-06-05 08:48:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:48:55] ANSI_COLOR="0;31"
[2025-06-05 08:48:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:48:55] HOME_URL="https://www.centos.org/"
[2025-06-05 08:48:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:48:55] 
[2025-06-05 08:48:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:48:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:48:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:48:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:48:55] 
[2025-06-05 08:48:55] 2025-06-05 12:48:37,625 | INFO     | **************************************
[2025-06-05 08:48:55] 2025-06-05 12:48:38,131 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 08:48:55] 2025-06-05 12:48:38,155 | INFO     | sufficient remaining disk space (76323749888 B)
[2025-06-05 08:48:55] 2025-06-05 12:48:38,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:48:55] 2025-06-05 12:48:38,155 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:48:55] 2025-06-05 12:48:38,155 | INFO     | update_server=False
[2025-06-05 08:48:55] 2025-06-05 12:48:38,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:48:55] 2025-06-05 12:48:38,674 | INFO     | all data control threads have been joined
[2025-06-05 08:48:55] 2025-06-05 12:48:38,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:48:55] 2025-06-05 12:48:38,972 | INFO     | aborting loop
[2025-06-05 08:48:55] 2025-06-05 12:48:38,979 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:48:55] 2025-06-05 12:48:38,979 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:48:55] 2025-06-05 12:48:38,979 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:48:55] 2025-06-05 12:48:39,162 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:39,380 | INFO     | all job control threads have been joined
[2025-06-05 08:48:55] 2025-06-05 12:48:39,390 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:48:55] 2025-06-05 12:48:39,407 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:39,417 | INFO     | [job] validate thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:39,640 | INFO     | all payload control threads have been joined
[2025-06-05 08:48:55] 2025-06-05 12:48:39,681 | INFO     | [data] control thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:39,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:48:55] 2025-06-05 12:48:39,743 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:39,977 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:40,037 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:40,300 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:40,384 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:40,387 | INFO     | [job] control thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:40,431 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:40,646 | INFO     | [payload] control thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:41,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:48:55] 2025-06-05 12:48:41,398 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:42,158 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:43,752 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:48,664 | INFO     | job.realtimelogging is not enabled
[2025-06-05 08:48:55] 2025-06-05 12:48:49,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:48:55] 2025-06-05 12:48:49,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288649783104)>', '<ExcThread(monitor, started 140288144152320)>']
[2025-06-05 08:48:55] 2025-06-05 12:48:50,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:48:55] 2025-06-05 12:48:50,042 | INFO     | [monitor] control thread has ended
[2025-06-05 08:48:55] 2025-06-05 12:48:54,997 | INFO     | all workflow threads have been joined
[2025-06-05 08:48:55] 2025-06-05 12:48:54,998 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:48:55] 2025-06-05 12:48:54,998 | INFO     | traces error code: 0
[2025-06-05 08:48:55] 2025-06-05 12:48:54,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:48:55] 2025-06-05 12:48:55,192 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:48:55] 2025-06-05 12:48:55,196 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:48:55] 2025-06-05 12:48:55,199 [wrapper] pilotpid: 3305554
[2025-06-05 08:48:55] 2025-06-05 12:48:55,202 [wrapper] Pilot exit status: 0
[2025-06-05 08:48:55] 2025-06-05 12:48:55,214 [wrapper] pandaids: 6668531310
[2025-06-05 08:48:55] 2025-06-05 12:48:55,290 [wrapper] cleanup supervisor_pilot 3767908 3305555
[2025-06-05 08:48:55] 2025-06-05 12:48:55,294 [wrapper] Test setup, not cleaning
[2025-06-05 08:48:55] 2025-06-05 12:48:55,298 [wrapper] apfmon messages muted
[2025-06-05 08:48:55] 2025-06-05 12:48:55,301 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:48:55] 2025-06-05 12:48:55,305 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:48:55]  *** Error codes and diagnostics ***
[2025-06-05 08:48:55]     "exeErrorCode": 0,
[2025-06-05 08:48:55]     "exeErrorDiag": "",
[2025-06-05 08:48:55]     "pilotErrorCode": 0,
[2025-06-05 08:48:55]     "pilotErrorDiag": "",
[2025-06-05 08:48:55]  *** Listing of results directory ***
[2025-06-05 08:48:55] total 416512
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas    495897 May 28 09:15 pilot3.tar.gz
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas      5111 May 28 09:46 queuedata.json
[2025-06-05 08:48:55] -rwx------. 1 boincer umatlas     37140 May 28 09:47 runpilot2-wrapper.sh
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas       100 Jun  5 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:48:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 06:22 run_atlas
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas       105 Jun  5 06:22 job.xml
[2025-06-05 08:48:55] -rw-r--r--. 2 boincer umatlas 224404465 Jun  5 06:22 EVNT.44871834._003319.pool.root.1
[2025-06-05 08:48:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 06:22 shared
[2025-06-05 08:48:55] -rw-r--r--. 2 boincer umatlas    508876 Jun  5 06:22 input.tar.gz
[2025-06-05 08:48:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 06:22 start_atlas.sh
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas         0 Jun  5 06:22 boinc_lockfile
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 06:22 pandaJob.out
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas    982836 Jun  5 06:22 agis_schedconf.cvmfs.json
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas   1598969 Jun  5 06:22 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:48:55] drwx------. 4 boincer umatlas      4096 Jun  5 06:22 pilot3
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 08:36 init_data.xml
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas 195897887 Jun  5 08:47 HITS.44871837._085136.pool.root.1
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas        95 Jun  5 08:47 pilot_heartbeat.json
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas       530 Jun  5 08:47 boinc_task_state.xml
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas      1053 Jun  5 08:48 memory_monitor_summary.json
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas    413100 Jun  5 08:48 log.44871837._085136.job.log.tgz.1
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas      7719 Jun  5 08:48 heartbeat.json
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 08:48 boinc_mmap_file
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas        27 Jun  5 08:48 wrapper_checkpoint.txt
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas      4425 Jun  5 08:48 pilotlog.txt
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas    780407 Jun  5 08:48 log.44871837._085136.job.log.1
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas       357 Jun  5 08:48 output.list
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas       620 Jun  5 08:48 runtime_log
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas   1208320 Jun  5 08:48 result.tar.gz
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas      8661 Jun  5 08:48 runtime_log.err
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas       654 Jun  5 08:48 fftLDmCJWe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2GcKDmYaVSon.diag
[2025-06-05 08:48:55] -rw-r--r--. 1 boincer umatlas     21213 Jun  5 08:48 stderr.txt
[2025-06-05 08:48:55] HITS file was successfully produced:
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas 195897887 Jun  5 08:47 shared/HITS.pool.root.1
[2025-06-05 08:48:55]  *** Contents of shared directory: ***
[2025-06-05 08:48:55] total 412156
[2025-06-05 08:48:55] -rw-r--r--. 2 boincer umatlas 224404465 Jun  5 06:22 ATLAS.root_0
[2025-06-05 08:48:55] -rw-r--r--. 2 boincer umatlas    508876 Jun  5 06:22 input.tar.gz
[2025-06-05 08:48:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 06:22 start_atlas.sh
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas 195897887 Jun  5 08:47 HITS.pool.root.1
[2025-06-05 08:48:55] -rw-------. 1 boincer umatlas   1208320 Jun  5 08:48 result.tar.gz
08:48:56 (3301642): run_atlas exited; CPU time 49382.802826
08:48:56 (3301642): called boinc_finish(0)

</stderr_txt>
]]>

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