Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:16:08 (996123): wrapper (7.7.26015): starting
14:16:08 (996123): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 14:16:08] Arguments: --nthreads 12
[2025-06-06 14:16:08] Threads: 12
[2025-06-06 14:16:08] Checking for CVMFS
[2025-06-06 14:16:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 14:16:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 14:16:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 14:16:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 14:16:13] 2.12.7.0 4529 2456 45592 146862 3 56 2759599 4096001 912 130560 0 2773104 99.993 561593 151 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 14:16:13] CVMFS is ok
[2025-06-06 14:16:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 14:16:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 14:16:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 14:16:13] Further information can be found at the LHC@home message board.
[2025-06-06 14:16:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 14:16:13] Checking for apptainer binary...
[2025-06-06 14:16:13] apptainer is not installed, using version from CVMFS
[2025-06-06 14:16:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 14:16:17] martinpcalt
[2025-06-06 14:16:17] apptainer works
[2025-06-06 14:16:17] Set ATHENA_PROC_NUMBER=12
[2025-06-06 14:16:17] Set ATHENA_CORE_NUMBER=12
[2025-06-06 14:16:17] Starting ATLAS job with PandaID=6668687110
[2025-06-06 14:16:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 17:54:33]  *** The last 200 lines of the pilot log: ***
[2025-06-06 17:54:33] 2025-06-06 17:54:12,001 | INFO     | extracted standard info from prmon json
[2025-06-06 17:54:33] 2025-06-06 17:54:12,001 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 17:54:33] 2025-06-06 17:54:12,001 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 17:54:33] 2025-06-06 17:54:12,001 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 17:54:33] 2025-06-06 17:54:12,001 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 17:54:33] 2025-06-06 17:54:12,004 | INFO     | fitting pss+swap vs Time
[2025-06-06 17:54:33] 2025-06-06 17:54:12,004 | INFO     | sum of square deviations: 2817928288.3285203
[2025-06-06 17:54:33] 2025-06-06 17:54:12,005 | INFO     | sum of deviations: 4281153539.6714916
[2025-06-06 17:54:33] 2025-06-06 17:54:12,005 | INFO     | mean x: 1749226014.7729468
[2025-06-06 17:54:33] 2025-06-06 17:54:12,005 | INFO     | mean y: 2602350.2270531403
[2025-06-06 17:54:33] 2025-06-06 17:54:12,005 | INFO     | -- intersect: -2654919197.020216
[2025-06-06 17:54:33] 2025-06-06 17:54:12,005 | INFO     | intersect: -2654919197.020216
[2025-06-06 17:54:33] 2025-06-06 17:54:12,005 | INFO     | chi2: 6.151377972395995
[2025-06-06 17:54:33] 2025-06-06 17:54:12,005 | INFO     | sum of square deviations: 2621173292.51981
[2025-06-06 17:54:33] 2025-06-06 17:54:12,006 | INFO     | sum of deviations: 61008899570.846504
[2025-06-06 17:54:33] 2025-06-06 17:54:12,006 | INFO     | mean x: 1749225861.40099
[2025-06-06 17:54:33] 2025-06-06 17:54:12,006 | INFO     | mean y: 2646358.7673267326
[2025-06-06 17:54:33] 2025-06-06 17:54:12,006 | INFO     | -- intersect: -40711313763.399574
[2025-06-06 17:54:33] 2025-06-06 17:54:12,006 | INFO     | intersect: -40711313763.399574
[2025-06-06 17:54:33] 2025-06-06 17:54:12,007 | INFO     | chi2: 3.0245723612626825
[2025-06-06 17:54:33] 2025-06-06 17:54:12,007 | INFO     | current chi2=3.0245723612626825 (change=50.83097844360561 %)
[2025-06-06 17:54:33] 2025-06-06 17:54:12,007 | INFO     | sum of square deviations: 2433813498.9543223
[2025-06-06 17:54:33] 2025-06-06 17:54:12,008 | INFO     | sum of deviations: 58830131062.20309
[2025-06-06 17:54:33] 2025-06-06 17:54:12,016 | INFO     | mean x: 1749225707.9847715
[2025-06-06 17:54:33] 2025-06-06 17:54:12,016 | INFO     | mean y: 2644583.4010152286
[2025-06-06 17:54:33] 2025-06-06 17:54:12,016 | INFO     | -- intersect: -42279632880.477264
[2025-06-06 17:54:33] 2025-06-06 17:54:12,016 | INFO     | intersect: -42279632880.477264
[2025-06-06 17:54:33] 2025-06-06 17:54:12,016 | INFO     | chi2: 3.027214074717315
[2025-06-06 17:54:33] 2025-06-06 17:54:12,016 | INFO     | current chi2=3.027214074717315 (change=-0.08734171774053799 %)
[2025-06-06 17:54:33] 2025-06-06 17:54:12,016 | INFO     | right removable region: 196
[2025-06-06 17:54:33] 2025-06-06 17:54:12,017 | INFO     | sum of square deviations: 2617438300.712881
[2025-06-06 17:54:33] 2025-06-06 17:54:12,017 | INFO     | sum of deviations: -52984901690.9802
[2025-06-06 17:54:33] 2025-06-06 17:54:12,017 | INFO     | mean x: 1749226169.5940595
[2025-06-06 17:54:33] 2025-06-06 17:54:12,018 | INFO     | mean y: 2646371.6831683167
[2025-06-06 17:54:33] 2025-06-06 17:54:12,018 | INFO     | -- intersect: 35412297329.25807
[2025-06-06 17:54:33] 2025-06-06 17:54:12,018 | INFO     | intersect: 35412297329.25807
[2025-06-06 17:54:33] 2025-06-06 17:54:12,018 | INFO     | chi2: 3.4693754596341693
[2025-06-06 17:54:33] 2025-06-06 17:54:12,018 | INFO     | current chi2=3.4693754596341693 (change=43.60002790914783 %)
[2025-06-06 17:54:33] 2025-06-06 17:54:12,018 | INFO     | sum of square deviations: 2426341551.0355263
[2025-06-06 17:54:33] 2025-06-06 17:54:12,019 | INFO     | sum of deviations: -61161675303.213196
[2025-06-06 17:54:33] 2025-06-06 17:54:12,019 | INFO     | mean x: 1749226324.532995
[2025-06-06 17:54:33] 2025-06-06 17:54:12,019 | INFO     | mean y: 2652946.8020304567
[2025-06-06 17:54:33] 2025-06-06 17:54:12,019 | INFO     | -- intersect: 44096038087.59567
[2025-06-06 17:54:33] 2025-06-06 17:54:12,019 | INFO     | intersect: 44096038087.59567
[2025-06-06 17:54:33] 2025-06-06 17:54:12,019 | INFO     | chi2: 3.3870585928380645
[2025-06-06 17:54:33] 2025-06-06 17:54:12,019 | INFO     | current chi2=3.3870585928380645 (change=2.372671039899057 %)
[2025-06-06 17:54:33] 2025-06-06 17:54:12,019 | INFO     | left removable region: 20
[2025-06-06 17:54:33] 2025-06-06 17:54:12,020 | INFO     | sum of square deviations: 1731038030.9090917
[2025-06-06 17:54:33] 2025-06-06 17:54:12,024 | INFO     | sum of deviations: 4314553774.909093
[2025-06-06 17:54:33] 2025-06-06 17:54:12,024 | INFO     | mean x: 1749226297.7272727
[2025-06-06 17:54:33] 2025-06-06 17:54:12,024 | INFO     | mean y: 2689569.727272727
[2025-06-06 17:54:33] 2025-06-06 17:54:12,025 | INFO     | -- intersect: -4357197845.378174
[2025-06-06 17:54:33] 2025-06-06 17:54:12,025 | INFO     | intersect: -4357197845.378174
[2025-06-06 17:54:33] 2025-06-06 17:54:12,025 | INFO     | chi2: 0.002407097229616555
[2025-06-06 17:54:33] 2025-06-06 17:54:12,025 | INFO     | -- intersect: -4357197845.378174
[2025-06-06 17:54:33] 2025-06-06 17:54:12,025 | INFO     | current memory leak: 2.49 B/s (using 176 data points, chi2=0.00)
[2025-06-06 17:54:33] 2025-06-06 17:54:12,025 | INFO     | ..............................
[2025-06-06 17:54:33] 2025-06-06 17:54:12,025 | INFO     | . Timing measurements:
[2025-06-06 17:54:33] 2025-06-06 17:54:12,025 | INFO     | . get job = 0 s
[2025-06-06 17:54:33] 2025-06-06 17:54:12,026 | INFO     | . initial setup = 4 s
[2025-06-06 17:54:33] 2025-06-06 17:54:12,026 | INFO     | . payload setup = 61 s
[2025-06-06 17:54:33] 2025-06-06 17:54:12,026 | INFO     | . stage-in = 0 s
[2025-06-06 17:54:33] 2025-06-06 17:54:12,026 | INFO     | . payload execution = 12762 s
[2025-06-06 17:54:33] 2025-06-06 17:54:12,026 | INFO     | . stage-out = 17 s
[2025-06-06 17:54:33] 2025-06-06 17:54:12,026 | INFO     | . log creation = 0 s
[2025-06-06 17:54:33] 2025-06-06 17:54:12,026 | INFO     | ..............................
[2025-06-06 17:54:33] 2025-06-06 17:54:12,568 | INFO     | 
[2025-06-06 17:54:33] 2025-06-06 17:54:12,568 | INFO     | job summary report
[2025-06-06 17:54:33] 2025-06-06 17:54:12,568 | INFO     | --------------------------------------------------
[2025-06-06 17:54:33] 2025-06-06 17:54:12,568 | INFO     | PanDA job id: 6668687110
[2025-06-06 17:54:33] 2025-06-06 17:54:12,568 | INFO     | task id: 44871837
[2025-06-06 17:54:33] 2025-06-06 17:54:12,568 | INFO     | errors: (none)
[2025-06-06 17:54:33] 2025-06-06 17:54:12,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 17:54:33] 2025-06-06 17:54:12,568 | INFO     | pilot state: finished 
[2025-06-06 17:54:33] 2025-06-06 17:54:12,568 | INFO     | transexitcode: 0
[2025-06-06 17:54:33] 2025-06-06 17:54:12,568 | INFO     | exeerrorcode: 0
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | exeerrordiag: 
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | exitcode: 0
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | exitmsg: OK
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | cpuconsumptiontime: 41534 s
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | nevents: 400
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | neventsw: 0
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | pid: 1006200
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | pgrp: 1006200
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | corecount: 12
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | event service: False
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | sizes: {0: 2396563, 1: 2397271, 2: 2397470, 12: 2397470, 23: 2397498, 34: 2397526, 38: 2397888, 45: 2397916, 12830: 2427446, 12831: 2427445, 12849: 2436824, 12926:
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | --------------------------------------------------
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | 
[2025-06-06 17:54:33] 2025-06-06 17:54:12,569 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 17:54:33] 2025-06-06 17:54:12,624 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,625 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 17:54:33] 2025-06-06 17:54:12,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,626 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 17:54:33] 2025-06-06 17:54:12,626 | INFO     | job 6668687110 has completed (purged errors)
[2025-06-06 17:54:33] 2025-06-06 17:54:12,626 | INFO     | overall cleanup function is called
[2025-06-06 17:54:33] 2025-06-06 17:54:13,656 | INFO     | --- collectZombieJob: --- 10, [1006200]
[2025-06-06 17:54:33] 2025-06-06 17:54:13,656 | INFO     | zombie collector waiting for pid 1006200
[2025-06-06 17:54:33] 2025-06-06 17:54:13,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 17:54:33] 2025-06-06 17:54:13,656 | INFO     | collected zombie processes
[2025-06-06 17:54:33] 2025-06-06 17:54:13,656 | INFO     | will attempt to kill all subprocesses of pid=1006200
[2025-06-06 17:54:33] 2025-06-06 17:54:13,800 | INFO     | process IDs to be killed: [1006200] (in reverse order)
[2025-06-06 17:54:33] 2025-06-06 17:54:13,860 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 17:54:33] 2025-06-06 17:54:13,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 17:54:33] 2025-06-06 17:54:13,862 | INFO     | did not find any defunct processes belonging to 1006200
[2025-06-06 17:54:33] 2025-06-06 17:54:13,863 | INFO     | did not find any defunct processes belonging to 1006200
[2025-06-06 17:54:33] 2025-06-06 17:54:13,864 | INFO     | ready for new job
[2025-06-06 17:54:33] 2025-06-06 17:54:13,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 17:54:33] 2025-06-06 17:54:13,869 | INFO     | **************************************
[2025-06-06 17:54:33] 2025-06-06 17:54:13,869 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 17:54:33] 2025-06-06 17:54:13,869 | INFO     | **************************************
[2025-06-06 17:54:33] 2025-06-06 17:54:13,869 | INFO     | 
[2025-06-06 17:54:33] 2025-06-06 17:54:13,892 | INFO     | architecture information:
[2025-06-06 17:54:33] 2025-06-06 17:54:13,912 | INFO     | executing command: cat /etc/os-release
[2025-06-06 17:54:33] 2025-06-06 17:54:13,948 | INFO     | cat /etc/os-release:
[2025-06-06 17:54:33] NAME="CentOS Linux"
[2025-06-06 17:54:33] VERSION="7 (Core)"
[2025-06-06 17:54:33] ID="centos"
[2025-06-06 17:54:33] ID_LIKE="rhel fedora"
[2025-06-06 17:54:33] VERSION_ID="7"
[2025-06-06 17:54:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 17:54:33] ANSI_COLOR="0;31"
[2025-06-06 17:54:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 17:54:33] HOME_URL="https://www.centos.org/"
[2025-06-06 17:54:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 17:54:33] 
[2025-06-06 17:54:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 17:54:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 17:54:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 17:54:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 17:54:33] 
[2025-06-06 17:54:33] 2025-06-06 17:54:13,948 | INFO     | **************************************
[2025-06-06 17:54:33] 2025-06-06 17:54:14,452 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 17:54:33] 2025-06-06 17:54:14,520 | INFO     | sufficient remaining disk space (279065919488 B)
[2025-06-06 17:54:33] 2025-06-06 17:54:14,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 17:54:33] 2025-06-06 17:54:14,520 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 17:54:33] 2025-06-06 17:54:14,520 | INFO     | update_server=False
[2025-06-06 17:54:33] 2025-06-06 17:54:14,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 17:54:33] 2025-06-06 17:54:14,564 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 17:54:33] 2025-06-06 17:54:14,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 17:54:33] 2025-06-06 17:54:14,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 17:54:33] 2025-06-06 17:54:14,612 | INFO     | all payload control threads have been joined
[2025-06-06 17:54:33] 2025-06-06 17:54:14,656 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 17:54:33] 2025-06-06 17:54:14,656 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 17:54:33] 2025-06-06 17:54:14,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:54:33] 2025-06-06 17:54:14,656 | INFO     | will abort loop
[2025-06-06 17:54:33] 2025-06-06 17:54:14,924 | INFO     | all job control threads have been joined
[2025-06-06 17:54:33] 2025-06-06 17:54:14,976 | INFO     | all data control threads have been joined
[2025-06-06 17:54:33] 2025-06-06 17:54:15,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 17:54:33] 2025-06-06 17:54:15,528 | INFO     | [job] retrieve thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:15,620 | INFO     | [payload] control thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:15,660 | INFO     | [job] job monitor thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:15,692 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:15,932 | INFO     | [job] control thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:15,980 | INFO     | [data] control thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:16,020 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:16,124 | INFO     | [job] validate thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:16,172 | INFO     | [data] copytool_in thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:16,172 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:16,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:16,468 | INFO     | [payload] failed_post thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:16,476 | INFO     | [payload] validate_post thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:17,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 17:54:33] 2025-06-06 17:54:17,464 | INFO     | [data] copytool_out thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:17,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 17:54:33] 2025-06-06 17:54:18,252 | INFO     | [job] queue monitor thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:21,736 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 17:54:33] 2025-06-06 17:54:23,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140716432844608)>', '<ExcThread(monitor, started 140715988338432)>']
[2025-06-06 17:54:33] 2025-06-06 17:54:23,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 17:54:33] 2025-06-06 17:54:23,604 | INFO     | [monitor] control thread has ended
[2025-06-06 17:54:33] 2025-06-06 17:54:28,480 | INFO     | all workflow threads have been joined
[2025-06-06 17:54:33] 2025-06-06 17:54:28,480 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 17:54:33] 2025-06-06 17:54:28,520 | INFO     | traces error code: 0
[2025-06-06 17:54:33] 2025-06-06 17:54:28,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 17:54:33] 2025-06-06 17:54:29,957 [wrapper] ==== pilot stdout END ====
[2025-06-06 17:54:33] 2025-06-06 17:54:29,981 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 17:54:33] 2025-06-06 17:54:30,001 [wrapper] pilotpid: 999733
[2025-06-06 17:54:33] 2025-06-06 17:54:30,021 [wrapper] Pilot exit status: 0
[2025-06-06 17:54:33] 2025-06-06 17:54:30,149 [wrapper] pandaids: 6668687110
[2025-06-06 17:54:33] 2025-06-06 17:54:30,265 [wrapper] cleanup supervisor_pilot 1058515 999734
[2025-06-06 17:54:33] 2025-06-06 17:54:30,281 [wrapper] Test setup, not cleaning
[2025-06-06 17:54:33] 2025-06-06 17:54:30,309 [wrapper] apfmon messages muted
[2025-06-06 17:54:33] 2025-06-06 17:54:30,329 [wrapper] ==== wrapper stdout END ====
[2025-06-06 17:54:33] 2025-06-06 17:54:30,349 [wrapper] ==== wrapper stderr END ====
[2025-06-06 17:54:33]  *** Error codes and diagnostics ***
[2025-06-06 17:54:33]     "exeErrorCode": 0,
[2025-06-06 17:54:33]     "exeErrorDiag": "",
[2025-06-06 17:54:33]     "pilotErrorCode": 0,
[2025-06-06 17:54:33]     "pilotErrorDiag": "",
[2025-06-06 17:54:33]  *** Listing of results directory ***
[2025-06-06 17:54:33] total 421696
[2025-06-06 17:54:33] -rw-r--r-- 1 boinc boinc    495897 Mai 28 15:15 pilot3.tar.gz
[2025-06-06 17:54:33] -rw-r--r-- 1 boinc boinc      5111 Mai 28 15:39 queuedata.json
[2025-06-06 17:54:33] -rwx------ 1 boinc boinc     37140 Mai 28 15:41 runpilot2-wrapper.sh
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc       100 Jun  6 14:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 17:54:33] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 14:16 run_atlas
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc       105 Jun  6 14:16 job.xml
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc      9334 Jun  6 14:16 init_data.xml
[2025-06-06 17:54:33] -rw-r--r-- 2 boinc boinc 223800463 Jun  6 14:16 EVNT.44871834._003369.pool.root.1
[2025-06-06 17:54:33] drwxrwx--x 2 boinc boinc      4096 Jun  6 14:16 shared
[2025-06-06 17:54:33] -rw-r--r-- 2 boinc boinc    508880 Jun  6 14:16 input.tar.gz
[2025-06-06 17:54:33] -rw-r--r-- 2 boinc boinc     15093 Jun  6 14:16 start_atlas.sh
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc         0 Jun  6 14:16 boinc_lockfile
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc      2558 Jun  6 14:16 pandaJob.out
[2025-06-06 17:54:33] -rw------- 1 boinc boinc    985728 Jun  6 14:17 agis_schedconf.cvmfs.json
[2025-06-06 17:54:33] drwx------ 4 boinc boinc      4096 Jun  6 14:17 pilot3
[2025-06-06 17:54:33] -rw------- 1 boinc boinc 200918064 Jun  6 17:46 HITS.44871837._086503.pool.root.1
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc       530 Jun  6 17:48 boinc_task_state.xml
[2025-06-06 17:54:33] -rw------- 1 boinc boinc      1043 Jun  6 17:52 memory_monitor_summary.json
[2025-06-06 17:54:33] -rw------- 1 boinc boinc   1598969 Jun  6 17:52 agis_ddmendpoints.agis.ALL.json
[2025-06-06 17:54:33] -rw------- 1 boinc boinc    430692 Jun  6 17:52 log.44871837._086503.job.log.tgz.1
[2025-06-06 17:54:33] -rw------- 1 boinc boinc        96 Jun  6 17:53 pilot_heartbeat.json
[2025-06-06 17:54:33] -rw------- 1 boinc boinc      7729 Jun  6 17:54 heartbeat.json
[2025-06-06 17:54:33] -rw------- 1 boinc boinc      4563 Jun  6 17:54 pilotlog.txt
[2025-06-06 17:54:33] -rw------- 1 boinc boinc   1198333 Jun  6 17:54 log.44871837._086503.job.log.1
[2025-06-06 17:54:33] -rw------- 1 boinc boinc       357 Jun  6 17:54 output.list
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc       620 Jun  6 17:54 runtime_log
[2025-06-06 17:54:33] -rw------- 1 boinc boinc   1648640 Jun  6 17:54 result.tar.gz
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc      8979 Jun  6 17:54 runtime_log.err
[2025-06-06 17:54:33] -rw------- 1 boinc boinc       664 Jun  6 17:54 ojwMDmY5Xe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxTcKDmTZQ38n.diag
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc        28 Jun  6 17:54 wrapper_checkpoint.txt
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 17:54 boinc_mmap_file
[2025-06-06 17:54:33] -rw-rw-r-- 1 boinc boinc     21055 Jun  6 17:54 stderr.txt
[2025-06-06 17:54:33] HITS file was successfully produced:
[2025-06-06 17:54:33] -rw------- 1 boinc boinc 200918064 Jun  6 17:46 shared/HITS.pool.root.1
[2025-06-06 17:54:33]  *** Contents of shared directory: ***
[2025-06-06 17:54:33] total 416904
[2025-06-06 17:54:33] -rw-r--r-- 2 boinc boinc 223800463 Jun  6 14:16 ATLAS.root_0
[2025-06-06 17:54:33] -rw-r--r-- 2 boinc boinc    508880 Jun  6 14:16 input.tar.gz
[2025-06-06 17:54:33] -rw-r--r-- 2 boinc boinc     15093 Jun  6 14:16 start_atlas.sh
[2025-06-06 17:54:33] -rw------- 1 boinc boinc 200918064 Jun  6 17:46 HITS.pool.root.1
[2025-06-06 17:54:33] -rw------- 1 boinc boinc   1648640 Jun  6 17:54 result.tar.gz
17:54:35 (996123): run_atlas exited; CPU time 41592.833788
17:54:35 (996123): called boinc_finish(0)

</stderr_txt>
]]>

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