Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:40:00 (10237): wrapper (7.7.26015): starting
21:40:00 (10237): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 21:40:00] Arguments: --nthreads 8
[2025-06-05 21:40:00] Threads: 8
[2025-06-05 21:40:00] Checking for CVMFS
[2025-06-05 21:40:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 21:40:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 21:40:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 21:40:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 21:40:02] 2.11.2.0 14465 35076 94136 146830 3 59 18238689 25165824 4684 130560 0 19139727 99.812 20900186 2057 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 21:40:02] CVMFS is ok
[2025-06-05 21:40:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 21:40:02] Checking for apptainer binary...
[2025-06-05 21:40:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 21:40:02] Running /usr/bin/apptainer --version
[2025-06-05 21:40:02] apptainer version 1.3.2-1.el7
[2025-06-05 21:40:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 21:41:16] cg-vwn249.simple-grid.lan
[2025-06-05 21:41:16] apptainer works
[2025-06-05 21:41:16] Set ATHENA_PROC_NUMBER=8
[2025-06-05 21:41:16] Set ATHENA_CORE_NUMBER=8
[2025-06-05 21:41:16] Starting ATLAS job with PandaID=6668231708
[2025-06-05 21:41:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:30:12]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:30:12] 2025-06-06 01:26:31,383 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:30:12] 2025-06-06 01:26:31,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:30:12] 2025-06-06 01:26:31,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:30:12] 2025-06-06 01:26:31,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:30:12] 2025-06-06 01:26:31,391 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:30:12] 2025-06-06 01:26:31,392 | INFO     | sum of square deviations: 10842205148.0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,395 | INFO     | sum of deviations: 169565078484.99997
[2025-06-06 03:30:12] 2025-06-06 01:26:31,396 | INFO     | mean x: 1749163089.0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,396 | INFO     | mean y: 2441206.73088685
[2025-06-06 03:30:12] 2025-06-06 01:26:31,396 | INFO     | -- intersect: -27353338583.514233
[2025-06-06 03:30:12] 2025-06-06 01:26:31,396 | INFO     | intersect: -27353338583.514233
[2025-06-06 03:30:12] 2025-06-06 01:26:31,396 | INFO     | chi2: 7.884796727578655
[2025-06-06 03:30:12] 2025-06-06 01:26:31,397 | INFO     | sum of square deviations: 10352419220.5
[2025-06-06 03:30:12] 2025-06-06 01:26:31,400 | INFO     | sum of deviations: 188886690563.99997
[2025-06-06 03:30:12] 2025-06-06 01:26:31,400 | INFO     | mean x: 1749162936.5
[2025-06-06 03:30:12] 2025-06-06 01:26:31,401 | INFO     | mean y: 2447136.894409938
[2025-06-06 03:30:12] 2025-06-06 01:26:31,401 | INFO     | -- intersect: -31912179898.151
[2025-06-06 03:30:12] 2025-06-06 01:26:31,401 | INFO     | intersect: -31912179898.151
[2025-06-06 03:30:12] 2025-06-06 01:26:31,401 | INFO     | chi2: 7.127264936915808
[2025-06-06 03:30:12] 2025-06-06 01:26:31,401 | INFO     | current chi2=7.127264936915808 (change=9.607499303225248 %)
[2025-06-06 03:30:12] 2025-06-06 01:26:31,401 | INFO     | right removable region: 321
[2025-06-06 03:30:12] 2025-06-06 01:26:31,402 | INFO     | sum of square deviations: 10352419220.5
[2025-06-06 03:30:12] 2025-06-06 01:26:31,405 | INFO     | sum of deviations: 54819870888.0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,406 | INFO     | mean x: 1749163241.5
[2025-06-06 03:30:12] 2025-06-06 01:26:31,406 | INFO     | mean y: 2476916.751552795
[2025-06-06 03:30:12] 2025-06-06 01:26:31,406 | INFO     | -- intersect: -9259986379.864668
[2025-06-06 03:30:12] 2025-06-06 01:26:31,406 | INFO     | intersect: -9259986379.864668
[2025-06-06 03:30:12] 2025-06-06 01:26:31,407 | INFO     | chi2: 3.0067292538771224
[2025-06-06 03:30:12] 2025-06-06 01:26:31,407 | INFO     | current chi2=3.0067292538771224 (change=61.86674992697675 %)
[2025-06-06 03:30:12] 2025-06-06 01:26:31,407 | INFO     | sum of square deviations: 9877610318.0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,410 | INFO     | sum of deviations: -18190676593.0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,411 | INFO     | mean x: 1749163394.0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,411 | INFO     | mean y: 2500299.665615142
[2025-06-06 03:30:12] 2025-06-06 01:26:31,411 | INFO     | -- intersect: 3223771901.217394
[2025-06-06 03:30:12] 2025-06-06 01:26:31,411 | INFO     | intersect: 3223771901.217394
[2025-06-06 03:30:12] 2025-06-06 01:26:31,412 | INFO     | chi2: 0.9346667149898957
[2025-06-06 03:30:12] 2025-06-06 01:26:31,412 | INFO     | current chi2=0.9346667149898957 (change=68.91417097882491 %)
[2025-06-06 03:30:12] 2025-06-06 01:26:31,412 | INFO     | sum of square deviations: 9417545878.0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,415 | INFO     | sum of deviations: -24590771979.5
[2025-06-06 03:30:12] 2025-06-06 01:26:31,416 | INFO     | mean x: 1749163546.5
[2025-06-06 03:30:12] 2025-06-06 01:26:31,416 | INFO     | mean y: 2502394.144230769
[2025-06-06 03:30:12] 2025-06-06 01:26:31,416 | INFO     | -- intersect: 4569858102.7388525
[2025-06-06 03:30:12] 2025-06-06 01:26:31,416 | INFO     | intersect: 4569858102.7388525
[2025-06-06 03:30:12] 2025-06-06 01:26:31,417 | INFO     | chi2: 0.8886262668201581
[2025-06-06 03:30:12] 2025-06-06 01:26:31,417 | INFO     | current chi2=0.8886262668201581 (change=4.925867951790211 %)
[2025-06-06 03:30:12] 2025-06-06 01:26:31,417 | INFO     | left removable region: 30
[2025-06-06 03:30:12] 2025-06-06 01:26:31,417 | INFO     | sum of square deviations: 7641036290.0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,420 | INFO     | sum of deviations: 9775928807.999983
[2025-06-06 03:30:12] 2025-06-06 01:26:31,420 | INFO     | mean x: 1749163821.0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,420 | INFO     | mean y: 2504951.3951890036
[2025-06-06 03:30:12] 2025-06-06 01:26:31,421 | INFO     | -- intersect: -2235372260.3652105
[2025-06-06 03:30:12] 2025-06-06 01:26:31,421 | INFO     | intersect: -2235372260.3652105
[2025-06-06 03:30:12] 2025-06-06 01:26:31,421 | INFO     | chi2: 0.0005304097007054779
[2025-06-06 03:30:12] 2025-06-06 01:26:31,421 | INFO     | -- intersect: -2235372260.3652105
[2025-06-06 03:30:12] 2025-06-06 01:26:31,422 | INFO     | current memory leak: 1.28 B/s (using 291 data points, chi2=0.00)
[2025-06-06 03:30:12] 2025-06-06 01:26:31,423 | INFO     | ..............................
[2025-06-06 03:30:12] 2025-06-06 01:26:31,423 | INFO     | . Timing measurements:
[2025-06-06 03:30:12] 2025-06-06 01:26:31,423 | INFO     | . get job = 0 s
[2025-06-06 03:30:12] 2025-06-06 01:26:31,423 | INFO     | . initial setup = 12 s
[2025-06-06 03:30:12] 2025-06-06 01:26:31,423 | INFO     | . payload setup = 134 s
[2025-06-06 03:30:12] 2025-06-06 01:26:31,423 | INFO     | . stage-in = 0 s
[2025-06-06 03:30:12] 2025-06-06 01:26:31,423 | INFO     | . payload execution = 20100 s
[2025-06-06 03:30:12] 2025-06-06 01:26:31,423 | INFO     | . stage-out = 3 s
[2025-06-06 03:30:12] 2025-06-06 01:26:31,423 | INFO     | . log creation = 1 s
[2025-06-06 03:30:12] 2025-06-06 01:26:31,423 | INFO     | ..............................
[2025-06-06 03:30:12] 2025-06-06 01:26:31,549 | INFO     | 
[2025-06-06 03:30:12] 2025-06-06 01:26:31,549 | INFO     | job summary report
[2025-06-06 03:30:12] 2025-06-06 01:26:31,549 | INFO     | --------------------------------------------------
[2025-06-06 03:30:12] 2025-06-06 01:26:31,549 | INFO     | PanDA job id: 6668231708
[2025-06-06 03:30:12] 2025-06-06 01:26:31,549 | INFO     | task id: 44871837
[2025-06-06 03:30:12] 2025-06-06 01:26:31,549 | INFO     | errors: (none)
[2025-06-06 03:30:12] 2025-06-06 01:26:31,549 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | pilot state: finished 
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | transexitcode: 0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | exeerrorcode: 0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | exeerrordiag: 
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | exitcode: 0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | exitmsg: OK
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | cpuconsumptiontime: 72797 s
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | nevents: 400
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | neventsw: 0
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | pid: 26263
[2025-06-06 03:30:12] 2025-06-06 01:26:31,550 | INFO     | pgrp: 26263
[2025-06-06 03:30:12] 2025-06-06 01:26:31,551 | INFO     | corecount: 8
[2025-06-06 03:30:12] 2025-06-06 01:26:31,551 | INFO     | event service: False
[2025-06-06 03:30:12] 2025-06-06 01:26:31,551 | INFO     | sizes: {0: 2396564, 1: 2397250, 2: 2397449, 13: 2397449, 23: 2397505, 34: 2397533, 45: 2397689, 56: 2397717, 66: 2397745, 77: 2397773, 88: 2397829, 89: 2398343, 99
[2025-06-06 03:30:12] 2025-06-06 01:26:31,551 | INFO     | --------------------------------------------------
[2025-06-06 03:30:12] 2025-06-06 01:26:31,551 | INFO     | 
[2025-06-06 03:30:12] 2025-06-06 01:26:31,551 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2025-06-06 03:30:12] 2025-06-06 01:26:31,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,582 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,583 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:30:12] 2025-06-06 01:26:31,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:30:12] 2025-06-06 01:26:31,584 | INFO     | job 6668231708 has completed (purged errors)
[2025-06-06 03:30:12] 2025-06-06 01:26:31,584 | INFO     | overall cleanup function is called
[2025-06-06 03:30:12] 2025-06-06 01:26:32,594 | INFO     | --- collectZombieJob: --- 10, [26263]
[2025-06-06 03:30:12] 2025-06-06 01:26:32,594 | INFO     | zombie collector waiting for pid 26263
[2025-06-06 03:30:12] 2025-06-06 01:26:32,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:30:12] 2025-06-06 01:26:32,594 | INFO     | collected zombie processes
[2025-06-06 03:30:12] 2025-06-06 01:26:32,594 | INFO     | will attempt to kill all subprocesses of pid=26263
[2025-06-06 03:30:12] 2025-06-06 01:26:32,689 | INFO     | process IDs to be killed: [26263] (in reverse order)
[2025-06-06 03:30:12] 2025-06-06 01:26:32,763 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:30:12] 2025-06-06 01:26:32,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:30:12] 2025-06-06 01:26:32,768 | INFO     | did not find any defunct processes belonging to 26263
[2025-06-06 03:30:12] 2025-06-06 01:26:32,772 | INFO     | did not find any defunct processes belonging to 26263
[2025-06-06 03:30:12] 2025-06-06 01:26:32,772 | INFO     | ready for new job
[2025-06-06 03:30:12] 2025-06-06 01:26:32,772 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:30:12] 2025-06-06 01:26:32,775 | INFO     | **************************************
[2025-06-06 03:30:12] 2025-06-06 01:26:32,775 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:30:12] 2025-06-06 01:26:32,775 | INFO     | **************************************
[2025-06-06 03:30:12] 2025-06-06 01:26:32,775 | INFO     | 
[2025-06-06 03:30:12] 2025-06-06 01:26:32,776 | INFO     | pilot is running in a VM
[2025-06-06 03:30:12] 2025-06-06 01:26:32,776 | INFO     | architecture information:
[2025-06-06 03:30:12] 2025-06-06 01:26:32,776 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:30:12] 2025-06-06 01:26:32,797 | INFO     | cat /etc/os-release:
[2025-06-06 03:30:12] NAME="CentOS Linux"
[2025-06-06 03:30:12] VERSION="7 (Core)"
[2025-06-06 03:30:12] ID="centos"
[2025-06-06 03:30:12] ID_LIKE="rhel fedora"
[2025-06-06 03:30:12] VERSION_ID="7"
[2025-06-06 03:30:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:30:12] ANSI_COLOR="0;31"
[2025-06-06 03:30:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:30:12] HOME_URL="https://www.centos.org/"
[2025-06-06 03:30:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:30:12] 
[2025-06-06 03:30:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:30:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:30:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:30:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:30:12] 
[2025-06-06 03:30:12] 2025-06-06 01:26:32,797 | INFO     | **************************************
[2025-06-06 03:30:12] 2025-06-06 01:26:33,300 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2025-06-06 03:30:12] 2025-06-06 01:26:33,454 | INFO     | sufficient remaining disk space (471084302336 B)
[2025-06-06 03:30:12] 2025-06-06 01:26:33,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:30:12] 2025-06-06 01:26:33,454 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:30:12] 2025-06-06 01:26:33,454 | INFO     | update_server=False
[2025-06-06 03:30:12] 2025-06-06 01:26:33,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:30:12] 2025-06-06 01:26:33,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:30:12] 2025-06-06 01:26:33,455 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:30:12] 2025-06-06 01:26:33,460 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 03:30:12] 2025-06-06 01:26:33,460 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:30:12] 2025-06-06 01:26:33,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:30:12] 2025-06-06 01:26:33,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:30:12] 2025-06-06 01:26:33,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:30:12] 2025-06-06 01:26:33,468 | INFO     | aborting loop
[2025-06-06 03:30:12] 2025-06-06 01:26:33,571 | INFO     | all data control threads have been joined
[2025-06-06 03:30:12] 2025-06-06 01:26:33,663 | INFO     | all payload control threads have been joined
[2025-06-06 03:30:12] 2025-06-06 01:26:33,676 | INFO     | all job control threads have been joined
[2025-06-06 03:30:12] 2025-06-06 01:26:33,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:30:12] 2025-06-06 01:26:34,460 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:34,461 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:34,474 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:34,577 | INFO     | [data] control thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:34,669 | INFO     | [payload] control thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:34,682 | INFO     | [job] control thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:34,717 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:34,757 | INFO     | [job] validate thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:34,862 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:35,500 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:35,648 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:35,785 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:35,972 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:35,985 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:37,464 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:43,867 | INFO     | job.realtimelogging is not enabled
[2025-06-06 03:30:12] 2025-06-06 01:26:44,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:30:12] 2025-06-06 01:26:46,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139948881004352)>', '<ExcThread(monitor, started 139948221003520)>']
[2025-06-06 03:30:12] 2025-06-06 01:26:46,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:30:12] 2025-06-06 01:26:46,537 | INFO     | [monitor] control thread has ended
[2025-06-06 03:30:12] 2025-06-06 01:26:51,029 | INFO     | all workflow threads have been joined
[2025-06-06 03:30:12] 2025-06-06 01:26:51,029 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:30:12] 2025-06-06 01:26:51,029 | INFO     | traces error code: 0
[2025-06-06 03:30:12] 2025-06-06 01:26:51,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:30:12] 2025-06-06 01:26:51,499 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:30:12] 2025-06-06 01:26:51,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:30:12] 2025-06-06 01:26:51,687 [wrapper] pilotpid: 19662
[2025-06-06 03:30:12] 2025-06-06 01:26:51,753 [wrapper] Pilot exit status: 0
[2025-06-06 03:30:12] 2025-06-06 01:26:52,222 [wrapper] pandaids: 6668231708
[2025-06-06 03:30:12] 2025-06-06 01:26:53,025 [wrapper] cleanup supervisor_pilot 21450 19663
[2025-06-06 03:30:12] 2025-06-06 01:26:53,159 [wrapper] Test setup, not cleaning
[2025-06-06 03:30:12] 2025-06-06 01:26:53,249 [wrapper] apfmon messages muted
[2025-06-06 03:30:12] 2025-06-06 01:26:53,303 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:30:12] 2025-06-06 01:26:53,357 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:30:12]  *** Error codes and diagnostics ***
[2025-06-06 03:30:12]     "exeErrorCode": 0,
[2025-06-06 03:30:12]     "exeErrorDiag": "",
[2025-06-06 03:30:12]     "pilotErrorCode": 0,
[2025-06-06 03:30:12]     "pilotErrorDiag": "",
[2025-06-06 03:30:12]  *** Listing of results directory ***
[2025-06-06 03:30:12] total 422728
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc      5111 May 28 09:42 queuedata.json
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc    495897 May 28 09:44 pilot3.tar.gz
[2025-06-06 03:30:12] -rwx------. 1 boinc boinc     37140 May 28 09:44 runpilot2-wrapper.sh
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc       100 Jun  5 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:30:12] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 21:40 run_atlas
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc       105 Jun  5 21:40 job.xml
[2025-06-06 03:30:12] -rw-r--r--. 2 boinc boinc 223978635 Jun  5 21:40 EVNT.44871834._003158.pool.root.1
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc      6393 Jun  5 21:40 init_data.xml
[2025-06-06 03:30:12] -rw-r--r--. 2 boinc boinc     15093 Jun  5 21:40 start_atlas.sh
[2025-06-06 03:30:12] drwxrwx--x. 2 boinc boinc        68 Jun  5 21:40 shared
[2025-06-06 03:30:12] -rw-r--r--. 2 boinc boinc    508877 Jun  5 21:40 input.tar.gz
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc         0 Jun  5 21:40 boinc_lockfile
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc      2559 Jun  5 21:41 pandaJob.out
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc    987599 Jun  5 21:44 agis_schedconf.cvmfs.json
[2025-06-06 03:30:12] drwx------. 4 boinc boinc      4096 Jun  5 21:44 pilot3
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc 200660186 Jun  6 03:23 HITS.44871837._080890.pool.root.1
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc       531 Jun  6 03:23 boinc_task_state.xml
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc      1021 Jun  6 03:24 memory_monitor_summary.json
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc   1598969 Jun  6 03:24 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc    444204 Jun  6 03:24 log.44871837._080890.job.log.tgz.1
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc        95 Jun  6 03:26 pilot_heartbeat.json
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc      7698 Jun  6 03:26 heartbeat.json
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc      4612 Jun  6 03:26 pilotlog.txt
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc   1759922 Jun  6 03:26 log.44871837._080890.job.log.1
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc       357 Jun  6 03:26 output.list
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc       620 Jun  6 03:26 runtime_log
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc   2222080 Jun  6 03:26 result.tar.gz
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc      8673 Jun  6 03:26 runtime_log.err
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc       658 Jun  6 03:26 79DNDmGeQe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpZbKDmiPx2nm.diag
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc      8192 Jun  6 03:30 boinc_mmap_file
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc        28 Jun  6 03:30 wrapper_checkpoint.txt
[2025-06-06 03:30:12] -rw-r--r--. 1 boinc boinc     20508 Jun  6 03:30 stderr.txt
[2025-06-06 03:30:12] HITS file was successfully produced:
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc 200660186 Jun  6 03:23 shared/HITS.pool.root.1
[2025-06-06 03:30:12]  *** Contents of shared directory: ***
[2025-06-06 03:30:12] total 417380
[2025-06-06 03:30:12] -rw-r--r--. 2 boinc boinc 223978635 Jun  5 21:40 ATLAS.root_0
[2025-06-06 03:30:12] -rw-r--r--. 2 boinc boinc     15093 Jun  5 21:40 start_atlas.sh
[2025-06-06 03:30:12] -rw-r--r--. 2 boinc boinc    508877 Jun  5 21:40 input.tar.gz
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc 200660186 Jun  6 03:23 HITS.pool.root.1
[2025-06-06 03:30:12] -rw-------. 1 boinc boinc   2222080 Jun  6 03:26 result.tar.gz
03:30:14 (10237): run_atlas exited; CPU time 73074.417432
03:30:14 (10237): called boinc_finish(0)

</stderr_txt>
]]>

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