Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:07:16 (823127): wrapper (7.7.26015): starting
04:07:16 (823127): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 04:07:16] Arguments: --nthreads 10
[2025-06-05 04:07:16] Threads: 10
[2025-06-05 04:07:16] Checking for CVMFS
[2025-06-05 04:07:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:07:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:07:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:07:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:07:16] 2.12.6.0 1696626 24926 280976 146810 0 412 32680763 32935937 17882 16776704 0 87614069 99.633 96305361 30111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 04:07:16] CVMFS is ok
[2025-06-05 04:07:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:07:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:07:16] Further information can be found at the LHC@home message board.
[2025-06-05 04:07:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:07:16] Checking for apptainer binary...
[2025-06-05 04:07:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:07:16] Running /usr/bin/apptainer --version
[2025-06-05 04:07:16] apptainer version 1.4.1-1.el9
[2025-06-05 04:07:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:07:16] c-4-38.aglt2.org
[2025-06-05 04:07:16] apptainer works
[2025-06-05 04:07:16] Set ATHENA_PROC_NUMBER=10
[2025-06-05 04:07:16] Set ATHENA_CORE_NUMBER=10
[2025-06-05 04:07:16] Starting ATLAS job with PandaID=6668327102
[2025-06-05 04:07:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:57:44]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:57:44] 2025-06-05 09:57:28,548 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668327102/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:57:44] 2025-06-05 09:57:28,549 | INFO     | extracted standard info from prmon json
[2025-06-05 05:57:44] 2025-06-05 09:57:28,550 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:57:44] 2025-06-05 09:57:28,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:57:44] 2025-06-05 09:57:28,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:57:44] 2025-06-05 09:57:28,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:57:44] 2025-06-05 09:57:28,553 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:57:44] 2025-06-05 09:57:28,554 | INFO     | sum of square deviations: 390540799.8796308
[2025-06-05 05:57:44] 2025-06-05 09:57:28,554 | INFO     | sum of deviations: 21529402661.638893
[2025-06-05 05:57:44] 2025-06-05 09:57:28,554 | INFO     | mean x: 1749114144.601852
[2025-06-05 05:57:44] 2025-06-05 09:57:28,554 | INFO     | mean y: 2304168.8055555555
[2025-06-05 05:57:44] 2025-06-05 09:57:28,555 | INFO     | -- intersect: -96421379942.83601
[2025-06-05 05:57:44] 2025-06-05 09:57:28,555 | INFO     | intersect: -96421379942.83601
[2025-06-05 05:57:44] 2025-06-05 09:57:28,555 | INFO     | chi2: 1.586855739064423
[2025-06-05 05:57:44] 2025-06-05 09:57:28,555 | INFO     | sum of square deviations: 338766439.825242
[2025-06-05 05:57:44] 2025-06-05 09:57:28,556 | INFO     | sum of deviations: 20966946068.611656
[2025-06-05 05:57:44] 2025-06-05 09:57:28,556 | INFO     | mean x: 1749113992.106796
[2025-06-05 05:57:44] 2025-06-05 09:57:28,556 | INFO     | mean y: 2302424.126213592
[2025-06-05 05:57:44] 2025-06-05 09:57:28,556 | INFO     | -- intersect: -108253930865.32202
[2025-06-05 05:57:44] 2025-06-05 09:57:28,556 | INFO     | intersect: -108253930865.32202
[2025-06-05 05:57:44] 2025-06-05 09:57:28,557 | INFO     | chi2: 1.5767577645926674
[2025-06-05 05:57:44] 2025-06-05 09:57:28,557 | INFO     | current chi2=1.5767577645926674 (change=0.6363511328199933 %)
[2025-06-05 05:57:44] 2025-06-05 09:57:28,557 | INFO     | right removable region: 102
[2025-06-05 05:57:44] 2025-06-05 09:57:28,557 | INFO     | sum of square deviations: 338759729.825242
[2025-06-05 05:57:44] 2025-06-05 09:57:28,558 | INFO     | sum of deviations: 3682789605.951457
[2025-06-05 05:57:44] 2025-06-05 09:57:28,558 | INFO     | mean x: 1749114297.106796
[2025-06-05 05:57:44] 2025-06-05 09:57:28,558 | INFO     | mean y: 2355994.640776699
[2025-06-05 05:57:44] 2025-06-05 09:57:28,558 | INFO     | -- intersect: -19012950093.62737
[2025-06-05 05:57:44] 2025-06-05 09:57:28,558 | INFO     | intersect: -19012950093.62737
[2025-06-05 05:57:44] 2025-06-05 09:57:28,559 | INFO     | chi2: 0.046159892760445534
[2025-06-05 05:57:44] 2025-06-05 09:57:28,559 | INFO     | current chi2=0.046159892760445534 (change=97.09110969421452 %)
[2025-06-05 05:57:44] 2025-06-05 09:57:28,559 | INFO     | sum of square deviations: 291775607.4795911
[2025-06-05 05:57:44] 2025-06-05 09:57:28,559 | INFO     | sum of deviations: 2865758258.153061
[2025-06-05 05:57:44] 2025-06-05 09:57:28,560 | INFO     | mean x: 1749114449.6020408
[2025-06-05 05:57:44] 2025-06-05 09:57:28,560 | INFO     | mean y: 2358642.2346938774
[2025-06-05 05:57:44] 2025-06-05 09:57:28,560 | INFO     | -- intersect: -17177073256.480515
[2025-06-05 05:57:44] 2025-06-05 09:57:28,560 | INFO     | intersect: -17177073256.480515
[2025-06-05 05:57:44] 2025-06-05 09:57:28,560 | INFO     | chi2: 0.020717571051979307
[2025-06-05 05:57:44] 2025-06-05 09:57:28,560 | INFO     | current chi2=0.020717571051979307 (change=55.11780939462619 %)
[2025-06-05 05:57:44] 2025-06-05 09:57:28,561 | INFO     | sum of square deviations: 249355565.3118274
[2025-06-05 05:57:44] 2025-06-05 09:57:28,561 | INFO     | sum of deviations: 2127567938.0430107
[2025-06-05 05:57:44] 2025-06-05 09:57:28,561 | INFO     | mean x: 1749114602.0860214
[2025-06-05 05:57:44] 2025-06-05 09:57:28,561 | INFO     | mean y: 2361288.494623656
[2025-06-05 05:57:44] 2025-06-05 09:57:28,561 | INFO     | -- intersect: -14921549243.469618
[2025-06-05 05:57:44] 2025-06-05 09:57:28,562 | INFO     | intersect: -14921549243.469618
[2025-06-05 05:57:44] 2025-06-05 09:57:28,562 | INFO     | chi2: 0.020114158248141986
[2025-06-05 05:57:44] 2025-06-05 09:57:28,562 | INFO     | current chi2=0.020114158248141986 (change=2.912565388690544 %)
[2025-06-05 05:57:44] 2025-06-05 09:57:28,562 | INFO     | left removable region: 30
[2025-06-05 05:57:44] 2025-06-05 09:57:28,562 | INFO     | sum of square deviations: 115707851.94444431
[2025-06-05 05:57:44] 2025-06-05 09:57:28,563 | INFO     | sum of deviations: 784366073.3888888
[2025-06-05 05:57:44] 2025-06-05 09:57:28,563 | INFO     | mean x: 1749114876.5277777
[2025-06-05 05:57:44] 2025-06-05 09:57:28,563 | INFO     | mean y: 2370119.8055555555
[2025-06-05 05:57:44] 2025-06-05 09:57:28,563 | INFO     | -- intersect: -11854615767.953445
[2025-06-05 05:57:44] 2025-06-05 09:57:28,563 | INFO     | intersect: -11854615767.953445
[2025-06-05 05:57:44] 2025-06-05 09:57:28,563 | INFO     | chi2: 0.008474126188750493
[2025-06-05 05:57:44] 2025-06-05 09:57:28,563 | INFO     | -- intersect: -11854615767.953445
[2025-06-05 05:57:44] 2025-06-05 09:57:28,564 | INFO     | current memory leak: 6.78 B/s (using 72 data points, chi2=0.01)
[2025-06-05 05:57:44] 2025-06-05 09:57:28,564 | INFO     | ..............................
[2025-06-05 05:57:44] 2025-06-05 09:57:28,564 | INFO     | . Timing measurements:
[2025-06-05 05:57:44] 2025-06-05 09:57:28,565 | INFO     | . get job = 0 s
[2025-06-05 05:57:44] 2025-06-05 09:57:28,565 | INFO     | . initial setup = 4 s
[2025-06-05 05:57:44] 2025-06-05 09:57:28,565 | INFO     | . payload setup = 9 s
[2025-06-05 05:57:44] 2025-06-05 09:57:28,565 | INFO     | . stage-in = 0 s
[2025-06-05 05:57:44] 2025-06-05 09:57:28,565 | INFO     | . payload execution = 6560 s
[2025-06-05 05:57:44] 2025-06-05 09:57:28,565 | INFO     | . stage-out = 0 s
[2025-06-05 05:57:44] 2025-06-05 09:57:28,565 | INFO     | . log creation = 0 s
[2025-06-05 05:57:44] 2025-06-05 09:57:28,565 | INFO     | ..............................
[2025-06-05 05:57:44] 2025-06-05 09:57:28,803 | INFO     | 
[2025-06-05 05:57:44] 2025-06-05 09:57:28,803 | INFO     | job summary report
[2025-06-05 05:57:44] 2025-06-05 09:57:28,803 | INFO     | --------------------------------------------------
[2025-06-05 05:57:44] 2025-06-05 09:57:28,803 | INFO     | PanDA job id: 6668327102
[2025-06-05 05:57:44] 2025-06-05 09:57:28,804 | INFO     | task id: 44871837
[2025-06-05 05:57:44] 2025-06-05 09:57:28,804 | INFO     | errors: (none)
[2025-06-05 05:57:44] 2025-06-05 09:57:28,804 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:57:44] 2025-06-05 09:57:28,804 | INFO     | pilot state: finished 
[2025-06-05 05:57:44] 2025-06-05 09:57:28,804 | INFO     | transexitcode: 0
[2025-06-05 05:57:44] 2025-06-05 09:57:28,804 | INFO     | exeerrorcode: 0
[2025-06-05 05:57:44] 2025-06-05 09:57:28,804 | INFO     | exeerrordiag: 
[2025-06-05 05:57:44] 2025-06-05 09:57:28,804 | INFO     | exitcode: 0
[2025-06-05 05:57:44] 2025-06-05 09:57:28,804 | INFO     | exitmsg: OK
[2025-06-05 05:57:44] 2025-06-05 09:57:28,805 | INFO     | cpuconsumptiontime: 56366 s
[2025-06-05 05:57:44] 2025-06-05 09:57:28,805 | INFO     | nevents: 400
[2025-06-05 05:57:44] 2025-06-05 09:57:28,805 | INFO     | neventsw: 0
[2025-06-05 05:57:44] 2025-06-05 09:57:28,805 | INFO     | pid: 837207
[2025-06-05 05:57:44] 2025-06-05 09:57:28,805 | INFO     | pgrp: 837207
[2025-06-05 05:57:44] 2025-06-05 09:57:28,805 | INFO     | corecount: 10
[2025-06-05 05:57:44] 2025-06-05 09:57:28,805 | INFO     | event service: False
[2025-06-05 05:57:44] 2025-06-05 09:57:28,805 | INFO     | sizes: {0: 2396564, 1: 2397420, 6: 2397626, 12: 2397654, 6573: 2424556, 6574: 2433497, 6577: 2433681, 6583: 2433851}
[2025-06-05 05:57:44] 2025-06-05 09:57:28,806 | INFO     | --------------------------------------------------
[2025-06-05 05:57:44] 2025-06-05 09:57:28,806 | INFO     | 
[2025-06-05 05:57:44] 2025-06-05 09:57:28,806 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 05:57:44] 2025-06-05 09:57:28,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,822 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,822 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,822 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,823 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,824 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:57:44] 2025-06-05 09:57:28,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,824 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:57:44] 2025-06-05 09:57:28,824 | INFO     | job 6668327102 has completed (purged errors)
[2025-06-05 05:57:44] 2025-06-05 09:57:28,824 | INFO     | overall cleanup function is called
[2025-06-05 05:57:44] 2025-06-05 09:57:29,832 | INFO     | --- collectZombieJob: --- 10, [837207]
[2025-06-05 05:57:44] 2025-06-05 09:57:29,833 | INFO     | zombie collector waiting for pid 837207
[2025-06-05 05:57:44] 2025-06-05 09:57:29,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:57:44] 2025-06-05 09:57:29,833 | INFO     | collected zombie processes
[2025-06-05 05:57:44] 2025-06-05 09:57:29,833 | INFO     | will attempt to kill all subprocesses of pid=837207
[2025-06-05 05:57:44] 2025-06-05 09:57:30,074 | INFO     | process IDs to be killed: [837207] (in reverse order)
[2025-06-05 05:57:44] 2025-06-05 09:57:30,135 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:57:44] 2025-06-05 09:57:30,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:57:44] 2025-06-05 09:57:30,143 | INFO     | did not find any defunct processes belonging to 837207
[2025-06-05 05:57:44] 2025-06-05 09:57:30,150 | INFO     | did not find any defunct processes belonging to 837207
[2025-06-05 05:57:44] 2025-06-05 09:57:30,151 | INFO     | ready for new job
[2025-06-05 05:57:44] 2025-06-05 09:57:30,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:57:44] 2025-06-05 09:57:30,152 | INFO     | **************************************
[2025-06-05 05:57:44] 2025-06-05 09:57:30,152 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:57:44] 2025-06-05 09:57:30,152 | INFO     | **************************************
[2025-06-05 05:57:44] 2025-06-05 09:57:30,152 | INFO     | 
[2025-06-05 05:57:44] 2025-06-05 09:57:30,165 | INFO     | architecture information:
[2025-06-05 05:57:44] 2025-06-05 09:57:30,166 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:57:44] 2025-06-05 09:57:30,178 | INFO     | cat /etc/os-release:
[2025-06-05 05:57:44] NAME="CentOS Linux"
[2025-06-05 05:57:44] VERSION="7 (Core)"
[2025-06-05 05:57:44] ID="centos"
[2025-06-05 05:57:44] ID_LIKE="rhel fedora"
[2025-06-05 05:57:44] VERSION_ID="7"
[2025-06-05 05:57:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:57:44] ANSI_COLOR="0;31"
[2025-06-05 05:57:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:57:44] HOME_URL="https://www.centos.org/"
[2025-06-05 05:57:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:57:44] 
[2025-06-05 05:57:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:57:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:57:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:57:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:57:44] 
[2025-06-05 05:57:44] 2025-06-05 09:57:30,178 | INFO     | **************************************
[2025-06-05 05:57:44] 2025-06-05 09:57:30,681 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 05:57:44] 2025-06-05 09:57:30,698 | INFO     | sufficient remaining disk space (76554436608 B)
[2025-06-05 05:57:44] 2025-06-05 09:57:30,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:57:44] 2025-06-05 09:57:30,699 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:57:44] 2025-06-05 09:57:30,699 | INFO     | update_server=False
[2025-06-05 05:57:44] 2025-06-05 09:57:30,699 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:57:44] 2025-06-05 09:57:30,699 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:57:44] 2025-06-05 09:57:30,700 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:57:44] 2025-06-05 09:57:30,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:57:44] 2025-06-05 09:57:30,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:57:44] 2025-06-05 09:57:30,876 | INFO     | all payload control threads have been joined
[2025-06-05 05:57:44] 2025-06-05 09:57:30,889 | INFO     | all data control threads have been joined
[2025-06-05 05:57:44] 2025-06-05 09:57:30,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:57:44] 2025-06-05 09:57:30,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:57:44] 2025-06-05 09:57:30,960 | INFO     | aborting loop
[2025-06-05 05:57:44] 2025-06-05 09:57:31,705 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:31,728 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:31,796 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:31,881 | INFO     | [payload] control thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:31,895 | INFO     | [data] control thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:31,902 | INFO     | all job control threads have been joined
[2025-06-05 05:57:44] 2025-06-05 09:57:31,964 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:32,445 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:32,513 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:32,551 | INFO     | [job] validate thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:32,597 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:32,609 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:32,908 | INFO     | [job] control thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:32,937 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:33,018 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:33,678 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:57:44] 2025-06-05 09:57:33,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:57:44] 2025-06-05 09:57:34,684 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:37,910 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:57:44] 2025-06-05 09:57:39,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916206217024)>', '<ExcThread(monitor, started 139915689957120)>']
[2025-06-05 05:57:44] 2025-06-05 09:57:39,745 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:57:44] 2025-06-05 09:57:39,745 | INFO     | [monitor] control thread has ended
[2025-06-05 05:57:44] 2025-06-05 09:57:44,040 | INFO     | all workflow threads have been joined
[2025-06-05 05:57:44] 2025-06-05 09:57:44,040 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:57:44] 2025-06-05 09:57:44,041 | INFO     | traces error code: 0
[2025-06-05 05:57:44] 2025-06-05 09:57:44,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:57:44] 2025-06-05 09:57:44,194 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:57:44] 2025-06-05 09:57:44,196 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:57:44] 2025-06-05 09:57:44,198 [wrapper] pilotpid: 829251
[2025-06-05 05:57:44] 2025-06-05 09:57:44,200 [wrapper] Pilot exit status: 0
[2025-06-05 05:57:44] 2025-06-05 09:57:44,211 [wrapper] pandaids: 6668327102
[2025-06-05 05:57:44] 2025-06-05 09:57:44,252 [wrapper] cleanup supervisor_pilot 1225052 829252
[2025-06-05 05:57:44] 2025-06-05 09:57:44,254 [wrapper] Test setup, not cleaning
[2025-06-05 05:57:44] 2025-06-05 09:57:44,257 [wrapper] apfmon messages muted
[2025-06-05 05:57:44] 2025-06-05 09:57:44,260 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:57:44] 2025-06-05 09:57:44,263 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:57:44]  *** Error codes and diagnostics ***
[2025-06-05 05:57:44]     "exeErrorCode": 0,
[2025-06-05 05:57:44]     "exeErrorDiag": "",
[2025-06-05 05:57:44]     "pilotErrorCode": 0,
[2025-06-05 05:57:44]     "pilotErrorDiag": "",
[2025-06-05 05:57:44]  *** Listing of results directory ***
[2025-06-05 05:57:44] total 416132
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas    495897 May 28 06:54 pilot3.tar.gz
[2025-06-05 05:57:44] -rwx------. 1 boincer umatlas     37140 May 28 06:56 runpilot2-wrapper.sh
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas      5111 May 28 06:56 queuedata.json
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas       100 Jun  5 04:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:57:44] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 04:07 run_atlas
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas       105 Jun  5 04:07 job.xml
[2025-06-05 05:57:44] -rw-r--r--. 2 boincer umatlas 225924489 Jun  5 04:07 EVNT.44871834._003247.pool.root.1
[2025-06-05 05:57:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 04:07 start_atlas.sh
[2025-06-05 05:57:44] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 04:07 shared
[2025-06-05 05:57:44] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 04:07 input.tar.gz
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas         0 Jun  5 04:07 boinc_lockfile
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 04:07 pandaJob.out
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas    983087 Jun  5 04:07 agis_schedconf.cvmfs.json
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas   1598969 Jun  5 04:07 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:57:44] drwx------. 4 boincer umatlas      4096 Jun  5 04:07 pilot3
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas      6674 Jun  5 05:56 init_data.xml
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas        95 Jun  5 05:56 pilot_heartbeat.json
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas 194399142 Jun  5 05:56 HITS.44871837._083191.pool.root.1
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas       529 Jun  5 05:56 boinc_task_state.xml
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas      1038 Jun  5 05:57 memory_monitor_summary.json
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas    360056 Jun  5 05:57 log.44871837._083191.job.log.tgz.1
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas      7711 Jun  5 05:57 heartbeat.json
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 05:57 boinc_mmap_file
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas        27 Jun  5 05:57 wrapper_checkpoint.txt
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas      4476 Jun  5 05:57 pilotlog.txt
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas    624414 Jun  5 05:57 log.44871837._083191.job.log.1
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas       357 Jun  5 05:57 output.list
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas       620 Jun  5 05:57 runtime_log
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas   1003520 Jun  5 05:57 result.tar.gz
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas       652 Jun  5 05:57 VQyLDmEdTe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJNTKDmDqhLwm.diag
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas      8651 Jun  5 05:57 runtime_log.err
[2025-06-05 05:57:44] -rw-r--r--. 1 boincer umatlas     20953 Jun  5 05:57 stderr.txt
[2025-06-05 05:57:44] HITS file was successfully produced:
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas 194399142 Jun  5 05:56 shared/HITS.pool.root.1
[2025-06-05 05:57:44]  *** Contents of shared directory: ***
[2025-06-05 05:57:44] total 411976
[2025-06-05 05:57:44] -rw-r--r--. 2 boincer umatlas 225924489 Jun  5 04:07 ATLAS.root_0
[2025-06-05 05:57:44] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 04:07 start_atlas.sh
[2025-06-05 05:57:44] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 04:07 input.tar.gz
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas 194399142 Jun  5 05:56 HITS.pool.root.1
[2025-06-05 05:57:44] -rw-------. 1 boincer umatlas   1003520 Jun  5 05:57 result.tar.gz
05:57:45 (823127): run_atlas exited; CPU time 56577.931146
05:57:45 (823127): called boinc_finish(0)

</stderr_txt>
]]>

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