Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:06:48 (1315653): wrapper (7.7.26015): starting
04:06:48 (1315653): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:06:48] Arguments: --nthreads 8
[2025-06-05 04:06:48] Threads: 8
[2025-06-05 04:06:48] Checking for CVMFS
[2025-06-05 04:06:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:06:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:06:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:06:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:06:49] 2.12.6.0 863165 33977 489376 146811 3 21 38019392 40960001 27063 16776704 1 161211210 99.682 143435236 27398 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 04:06:49] CVMFS is ok
[2025-06-05 04:06:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:06:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:06:49] Further information can be found at the LHC@home message board.
[2025-06-05 04:06:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:06:49] Checking for apptainer binary...
[2025-06-05 04:06:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:06:49] Running /usr/bin/apptainer --version
[2025-06-05 04:06:49] apptainer version 1.4.1-1.el9
[2025-06-05 04:06:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:06:49] c7-11-14.aglt2.org
[2025-06-05 04:06:49] apptainer works
[2025-06-05 04:06:49] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:06:49] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:06:49] Starting ATLAS job with PandaID=6667924046
[2025-06-05 04:06:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:31:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:31:07] 2025-06-05 10:30:53,819 | INFO     | extracted standard info from prmon json
[2025-06-05 06:31:07] 2025-06-05 10:30:53,819 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:31:07] 2025-06-05 10:30:53,819 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:31:07] 2025-06-05 10:30:53,820 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:31:07] 2025-06-05 10:30:53,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:31:07] 2025-06-05 10:30:53,821 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:31:07] 2025-06-05 10:30:53,821 | INFO     | sum of square deviations: 869174485.8865247
[2025-06-05 06:31:07] 2025-06-05 10:30:53,822 | INFO     | sum of deviations: 34404314523.72341
[2025-06-05 06:31:07] 2025-06-05 10:30:53,822 | INFO     | mean x: 1749115141.0283687
[2025-06-05 06:31:07] 2025-06-05 10:30:53,822 | INFO     | mean y: 2169338.3191489363
[2025-06-05 06:31:07] 2025-06-05 10:30:53,822 | INFO     | -- intersect: -69232614272.21042
[2025-06-05 06:31:07] 2025-06-05 10:30:53,822 | INFO     | intersect: -69232614272.21042
[2025-06-05 06:31:07] 2025-06-05 10:30:53,822 | INFO     | chi2: 2.1549431400696797
[2025-06-05 06:31:07] 2025-06-05 10:30:53,822 | INFO     | sum of square deviations: 779946125.8823526
[2025-06-05 06:31:07] 2025-06-05 10:30:53,823 | INFO     | sum of deviations: 34170410338.411747
[2025-06-05 06:31:07] 2025-06-05 10:30:53,823 | INFO     | mean x: 1749114988.5294118
[2025-06-05 06:31:07] 2025-06-05 10:30:53,823 | INFO     | mean y: 2168908.8970588236
[2025-06-05 06:31:07] 2025-06-05 10:30:53,823 | INFO     | -- intersect: -76628735334.00931
[2025-06-05 06:31:07] 2025-06-05 10:30:53,823 | INFO     | intersect: -76628735334.00931
[2025-06-05 06:31:07] 2025-06-05 10:30:53,823 | INFO     | chi2: 2.135951154136433
[2025-06-05 06:31:07] 2025-06-05 10:30:53,823 | INFO     | current chi2=2.135951154136433 (change=0.8813219049776274 %)
[2025-06-05 06:31:07] 2025-06-05 10:30:53,823 | INFO     | right removable region: 135
[2025-06-05 06:31:07] 2025-06-05 10:30:53,824 | INFO     | sum of square deviations: 779943685.8823526
[2025-06-05 06:31:07] 2025-06-05 10:30:53,824 | INFO     | sum of deviations: 9423222884.352943
[2025-06-05 06:31:07] 2025-06-05 10:30:53,824 | INFO     | mean x: 1749115293.5294118
[2025-06-05 06:31:07] 2025-06-05 10:30:53,824 | INFO     | mean y: 2211648.661764706
[2025-06-05 06:31:07] 2025-06-05 10:30:53,824 | INFO     | -- intersect: -21130472107.488644
[2025-06-05 06:31:07] 2025-06-05 10:30:53,824 | INFO     | intersect: -21130472107.488644
[2025-06-05 06:31:07] 2025-06-05 10:30:53,825 | INFO     | chi2: 0.3350341730496222
[2025-06-05 06:31:07] 2025-06-05 10:30:53,825 | INFO     | current chi2=0.3350341730496222 (change=84.45276040838883 %)
[2025-06-05 06:31:07] 2025-06-05 10:30:53,825 | INFO     | sum of square deviations: 697038585.877862
[2025-06-05 06:31:07] 2025-06-05 10:30:53,825 | INFO     | sum of deviations: -669690064.068702
[2025-06-05 06:31:07] 2025-06-05 10:30:53,825 | INFO     | mean x: 1749115446.0305343
[2025-06-05 06:31:07] 2025-06-05 10:30:53,825 | INFO     | mean y: 2230304.2671755725
[2025-06-05 06:31:07] 2025-06-05 10:30:53,825 | INFO     | -- intersect: 1682718671.551044
[2025-06-05 06:31:07] 2025-06-05 10:30:53,826 | INFO     | intersect: 1682718671.551044
[2025-06-05 06:31:07] 2025-06-05 10:30:53,826 | INFO     | chi2: 0.079553366072985
[2025-06-05 06:31:07] 2025-06-05 10:30:53,826 | INFO     | current chi2=0.079553366072985 (change=76.25514873636419 %)
[2025-06-05 06:31:07] 2025-06-05 10:30:53,826 | INFO     | sum of square deviations: 620226623.373014
[2025-06-05 06:31:07] 2025-06-05 10:30:53,826 | INFO     | sum of deviations: -2576528281.952381
[2025-06-05 06:31:07] 2025-06-05 10:30:53,827 | INFO     | mean x: 1749115598.5317461
[2025-06-05 06:31:07] 2025-06-05 10:30:53,827 | INFO     | mean y: 2234100.238095238
[2025-06-05 06:31:07] 2025-06-05 10:30:53,827 | INFO     | -- intersect: 7268361735.186045
[2025-06-05 06:31:07] 2025-06-05 10:30:53,827 | INFO     | intersect: 7268361735.186045
[2025-06-05 06:31:07] 2025-06-05 10:30:53,827 | INFO     | chi2: 0.06655133747850743
[2025-06-05 06:31:07] 2025-06-05 10:30:53,827 | INFO     | current chi2=0.06655133747850743 (change=16.343781836395276 %)
[2025-06-05 06:31:07] 2025-06-05 10:30:53,827 | INFO     | left removable region: 30
[2025-06-05 06:31:07] 2025-06-05 10:30:53,827 | INFO     | sum of square deviations: 358930588.9904774
[2025-06-05 06:31:07] 2025-06-05 10:30:53,827 | INFO     | sum of deviations: -2549690425.457143
[2025-06-05 06:31:07] 2025-06-05 10:30:53,828 | INFO     | mean x: 1749115873.0095239
[2025-06-05 06:31:07] 2025-06-05 10:30:53,828 | INFO     | mean y: 2239267.4571428574
[2025-06-05 06:31:07] 2025-06-05 10:30:53,828 | INFO     | -- intersect: 12427215380.445421
[2025-06-05 06:31:07] 2025-06-05 10:30:53,828 | INFO     | intersect: 12427215380.445421
[2025-06-05 06:31:07] 2025-06-05 10:30:53,828 | INFO     | chi2: 0.044239895190131905
[2025-06-05 06:31:07] 2025-06-05 10:30:53,828 | INFO     | -- intersect: 12427215380.445421
[2025-06-05 06:31:07] 2025-06-05 10:30:53,828 | INFO     | current memory leak: -7.10 B/s (using 105 data points, chi2=0.04)
[2025-06-05 06:31:07] 2025-06-05 10:30:53,829 | INFO     | ..............................
[2025-06-05 06:31:07] 2025-06-05 10:30:53,829 | INFO     | . Timing measurements:
[2025-06-05 06:31:07] 2025-06-05 10:30:53,829 | INFO     | . get job = 0 s
[2025-06-05 06:31:07] 2025-06-05 10:30:53,829 | INFO     | . initial setup = 4 s
[2025-06-05 06:31:07] 2025-06-05 10:30:53,829 | INFO     | . payload setup = 13 s
[2025-06-05 06:31:07] 2025-06-05 10:30:53,829 | INFO     | . stage-in = 0 s
[2025-06-05 06:31:07] 2025-06-05 10:30:53,829 | INFO     | . payload execution = 8581 s
[2025-06-05 06:31:07] 2025-06-05 10:30:53,829 | INFO     | . stage-out = 0 s
[2025-06-05 06:31:07] 2025-06-05 10:30:53,829 | INFO     | . log creation = 0 s
[2025-06-05 06:31:07] 2025-06-05 10:30:53,829 | INFO     | ..............................
[2025-06-05 06:31:07] 2025-06-05 10:30:53,899 | INFO     | 
[2025-06-05 06:31:07] 2025-06-05 10:30:53,899 | INFO     | job summary report
[2025-06-05 06:31:07] 2025-06-05 10:30:53,899 | INFO     | --------------------------------------------------
[2025-06-05 06:31:07] 2025-06-05 10:30:53,899 | INFO     | PanDA job id: 6667924046
[2025-06-05 06:31:07] 2025-06-05 10:30:53,899 | INFO     | task id: 44871837
[2025-06-05 06:31:07] 2025-06-05 10:30:53,899 | INFO     | errors: (none)
[2025-06-05 06:31:07] 2025-06-05 10:30:53,899 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:31:07] 2025-06-05 10:30:53,899 | INFO     | pilot state: finished 
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | transexitcode: 0
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | exeerrorcode: 0
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | exeerrordiag: 
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | exitcode: 0
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | exitmsg: OK
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | cpuconsumptiontime: 42139 s
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | nevents: 400
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | neventsw: 0
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | pid: 1337177
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | pgrp: 1337177
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | corecount: 8
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | event service: False
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | sizes: {0: 2397392, 9: 2397598, 11: 2397626, 8597: 2425533, 8598: 2434529, 8605: 2434643}
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | --------------------------------------------------
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | 
[2025-06-05 06:31:07] 2025-06-05 10:30:53,900 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 06:31:07] 2025-06-05 10:30:53,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,928 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:31:07] 2025-06-05 10:30:53,929 | INFO     | job 6667924046 has completed (purged errors)
[2025-06-05 06:31:07] 2025-06-05 10:30:53,929 | INFO     | overall cleanup function is called
[2025-06-05 06:31:07] 2025-06-05 10:30:54,937 | INFO     | --- collectZombieJob: --- 10, [1337177]
[2025-06-05 06:31:07] 2025-06-05 10:30:54,937 | INFO     | zombie collector waiting for pid 1337177
[2025-06-05 06:31:07] 2025-06-05 10:30:54,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:31:07] 2025-06-05 10:30:54,937 | INFO     | collected zombie processes
[2025-06-05 06:31:07] 2025-06-05 10:30:54,937 | INFO     | will attempt to kill all subprocesses of pid=1337177
[2025-06-05 06:31:07] 2025-06-05 10:30:55,317 | INFO     | process IDs to be killed: [1337177] (in reverse order)
[2025-06-05 06:31:07] 2025-06-05 10:30:55,471 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:31:07] 2025-06-05 10:30:55,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:31:07] 2025-06-05 10:30:55,488 | INFO     | did not find any defunct processes belonging to 1337177
[2025-06-05 06:31:07] 2025-06-05 10:30:55,501 | INFO     | did not find any defunct processes belonging to 1337177
[2025-06-05 06:31:07] 2025-06-05 10:30:55,501 | INFO     | ready for new job
[2025-06-05 06:31:07] 2025-06-05 10:30:55,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:31:07] 2025-06-05 10:30:55,503 | INFO     | **************************************
[2025-06-05 06:31:07] 2025-06-05 10:30:55,503 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:31:07] 2025-06-05 10:30:55,503 | INFO     | **************************************
[2025-06-05 06:31:07] 2025-06-05 10:30:55,503 | INFO     | 
[2025-06-05 06:31:07] 2025-06-05 10:30:55,519 | INFO     | architecture information:
[2025-06-05 06:31:07] 2025-06-05 10:30:55,519 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:31:07] 2025-06-05 10:30:55,536 | INFO     | cat /etc/os-release:
[2025-06-05 06:31:07] NAME="CentOS Linux"
[2025-06-05 06:31:07] VERSION="7 (Core)"
[2025-06-05 06:31:07] ID="centos"
[2025-06-05 06:31:07] ID_LIKE="rhel fedora"
[2025-06-05 06:31:07] VERSION_ID="7"
[2025-06-05 06:31:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:31:07] ANSI_COLOR="0;31"
[2025-06-05 06:31:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:31:07] HOME_URL="https://www.centos.org/"
[2025-06-05 06:31:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:31:07] 
[2025-06-05 06:31:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:31:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:31:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:31:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:31:07] 
[2025-06-05 06:31:07] 2025-06-05 10:30:55,537 | INFO     | **************************************
[2025-06-05 06:31:07] 2025-06-05 10:30:56,039 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 06:31:07] 2025-06-05 10:30:56,060 | INFO     | sufficient remaining disk space (85818605568 B)
[2025-06-05 06:31:07] 2025-06-05 10:30:56,060 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:31:07] 2025-06-05 10:30:56,060 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:31:07] 2025-06-05 10:30:56,060 | INFO     | update_server=False
[2025-06-05 06:31:07] 2025-06-05 10:30:56,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:31:07] 2025-06-05 10:30:56,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:31:07] 2025-06-05 10:30:56,430 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 06:31:07] 2025-06-05 10:30:56,432 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 06:31:07] 2025-06-05 10:30:56,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:31:07] 2025-06-05 10:30:56,432 | INFO     | will abort loop
[2025-06-05 06:31:07] 2025-06-05 10:30:56,439 | INFO     | all data control threads have been joined
[2025-06-05 06:31:07] 2025-06-05 10:30:56,713 | INFO     | all job control threads have been joined
[2025-06-05 06:31:07] 2025-06-05 10:30:56,824 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:31:07] 2025-06-05 10:30:56,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:31:07] 2025-06-05 10:30:56,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:31:07] 2025-06-05 10:30:56,984 | INFO     | all payload control threads have been joined
[2025-06-05 06:31:07] 2025-06-05 10:30:57,066 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:57,219 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:57,344 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:57,439 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:57,444 | INFO     | [data] control thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:57,483 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:57,718 | INFO     | [job] control thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:57,844 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:57,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:31:07] 2025-06-05 10:30:57,989 | INFO     | [payload] control thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:58,001 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:58,041 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:58,067 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:58,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:58,493 | INFO     | [job] validate thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:30:58,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:31:07] 2025-06-05 10:30:59,916 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:31:01,980 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:31:07] 2025-06-05 10:31:02,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200976893760)>', '<ExcThread(monitor, started 140200172824320)>']
[2025-06-05 06:31:07] 2025-06-05 10:31:02,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:31:07] 2025-06-05 10:31:02,856 | INFO     | [monitor] control thread has ended
[2025-06-05 06:31:07] 2025-06-05 10:31:07,335 | INFO     | all workflow threads have been joined
[2025-06-05 06:31:07] 2025-06-05 10:31:07,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:31:07] 2025-06-05 10:31:07,335 | INFO     | traces error code: 0
[2025-06-05 06:31:07] 2025-06-05 10:31:07,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:31:07] 2025-06-05 10:31:07,497 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:31:07] 2025-06-05 10:31:07,500 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:31:07] 2025-06-05 10:31:07,503 [wrapper] pilotpid: 1323501
[2025-06-05 06:31:07] 2025-06-05 10:31:07,506 [wrapper] Pilot exit status: 0
[2025-06-05 06:31:07] 2025-06-05 10:31:07,520 [wrapper] pandaids: 6667924046
[2025-06-05 06:31:07] 2025-06-05 10:31:07,624 [wrapper] cleanup supervisor_pilot 2807695 1323502
[2025-06-05 06:31:07] 2025-06-05 10:31:07,627 [wrapper] Test setup, not cleaning
[2025-06-05 06:31:07] 2025-06-05 10:31:07,630 [wrapper] apfmon messages muted
[2025-06-05 06:31:07] 2025-06-05 10:31:07,633 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:31:07] 2025-06-05 10:31:07,637 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:31:07]  *** Error codes and diagnostics ***
[2025-06-05 06:31:07]     "exeErrorCode": 0,
[2025-06-05 06:31:07]     "exeErrorDiag": "",
[2025-06-05 06:31:07]     "pilotErrorCode": 0,
[2025-06-05 06:31:07]     "pilotErrorDiag": "",
[2025-06-05 06:31:07]  *** Listing of results directory ***
[2025-06-05 06:31:07] total 421296
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas    495897 May 27 23:41 pilot3.tar.gz
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas      5111 May 27 23:50 queuedata.json
[2025-06-05 06:31:07] -rwx------. 1 boincer umatlas     37140 May 27 23:54 runpilot2-wrapper.sh
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas       100 Jun  5 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:31:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 04:06 run_atlas
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas       105 Jun  5 04:06 job.xml
[2025-06-05 06:31:07] -rw-r--r--. 2 boincer umatlas 226178680 Jun  5 04:06 EVNT.44871834._003058.pool.root.1
[2025-06-05 06:31:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 04:06 start_atlas.sh
[2025-06-05 06:31:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 04:06 shared
[2025-06-05 06:31:07] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 04:06 input.tar.gz
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas         0 Jun  5 04:06 boinc_lockfile
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 04:06 pandaJob.out
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas    983087 Jun  5 04:07 agis_schedconf.cvmfs.json
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas   1598969 Jun  5 04:07 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:31:07] drwx------. 4 boincer umatlas      4096 Jun  5 04:07 pilot3
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas       529 Jun  5 06:30 boinc_task_state.xml
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas 199102773 Jun  5 06:30 HITS.44871837._078232.pool.root.1
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas        95 Jun  5 06:30 pilot_heartbeat.json
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas      1034 Jun  5 06:30 memory_monitor_summary.json
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas    351415 Jun  5 06:30 log.44871837._078232.job.log.tgz.1
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas      6896 Jun  5 06:30 init_data.xml
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas      7693 Jun  5 06:30 heartbeat.json
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas        27 Jun  5 06:31 wrapper_checkpoint.txt
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas      4539 Jun  5 06:31 pilotlog.txt
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 06:31 boinc_mmap_file
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas    797731 Jun  5 06:31 log.44871837._078232.job.log.1
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas       357 Jun  5 06:31 output.list
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas       620 Jun  5 06:31 runtime_log
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas   1167360 Jun  5 06:31 result.tar.gz
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas      8659 Jun  5 06:31 runtime_log.err
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas       655 Jun  5 06:31 rkXNDmN3Me7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpBbKDmicN0On.diag
[2025-06-05 06:31:07] -rw-r--r--. 1 boincer umatlas     20840 Jun  5 06:31 stderr.txt
[2025-06-05 06:31:07] HITS file was successfully produced:
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas 199102773 Jun  5 06:30 shared/HITS.pool.root.1
[2025-06-05 06:31:07]  *** Contents of shared directory: ***
[2025-06-05 06:31:07] total 416980
[2025-06-05 06:31:07] -rw-r--r--. 2 boincer umatlas 226178680 Jun  5 04:06 ATLAS.root_0
[2025-06-05 06:31:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 04:06 start_atlas.sh
[2025-06-05 06:31:07] -rw-r--r--. 2 boincer umatlas    508883 Jun  5 04:06 input.tar.gz
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas 199102773 Jun  5 06:30 HITS.pool.root.1
[2025-06-05 06:31:07] -rw-------. 1 boincer umatlas   1167360 Jun  5 06:31 result.tar.gz
06:31:09 (1315653): run_atlas exited; CPU time 42268.222598
06:31:09 (1315653): called boinc_finish(0)

</stderr_txt>
]]>

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