Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:54:02 (998297): wrapper (7.7.26015): starting
03:54:02 (998297): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 03:54:02] Arguments: --nthreads 8
[2025-06-05 03:54:02] Threads: 8
[2025-06-05 03:54:02] Checking for CVMFS
[2025-06-05 03:54:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:54:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:54:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:54:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:54:03] 2.12.6.0 10250 32569 581340 146810 3 527 29798386 32935936 22394 16776704 1 174926162 99.684 137920463 27841 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 03:54:03] CVMFS is ok
[2025-06-05 03:54:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 03:54:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 03:54:03] Further information can be found at the LHC@home message board.
[2025-06-05 03:54:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:54:03] Checking for apptainer binary...
[2025-06-05 03:54:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:54:03] Running /usr/bin/apptainer --version
[2025-06-05 03:54:03] apptainer version 1.4.1-1.el9
[2025-06-05 03:54:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:54:04] c6-12-29-2.aglt2.org
[2025-06-05 03:54:04] apptainer works
[2025-06-05 03:54:04] Set ATHENA_PROC_NUMBER=8
[2025-06-05 03:54:04] Set ATHENA_CORE_NUMBER=8
[2025-06-05 03:54:04] Starting ATLAS job with PandaID=6668688178
[2025-06-05 03:54:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:22:19]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:22:19] 2025-06-05 10:22:06,982 | INFO     | extracted standard info from prmon json
[2025-06-05 06:22:19] 2025-06-05 10:22:06,982 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:22:19] 2025-06-05 10:22:06,982 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:22:19] 2025-06-05 10:22:06,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:22:19] 2025-06-05 10:22:06,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:22:19] 2025-06-05 10:22:06,986 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:22:19] 2025-06-05 10:22:06,986 | INFO     | sum of square deviations: 945294930.6482742
[2025-06-05 06:22:19] 2025-06-05 10:22:06,987 | INFO     | sum of deviations: 19833486636.95861
[2025-06-05 06:22:19] 2025-06-05 10:22:06,987 | INFO     | mean x: 1749114498.0965517
[2025-06-05 06:22:19] 2025-06-05 10:22:06,987 | INFO     | mean y: 2101243.7172413794
[2025-06-05 06:22:19] 2025-06-05 10:22:06,988 | INFO     | -- intersect: -36696539465.926414
[2025-06-05 06:22:19] 2025-06-05 10:22:06,988 | INFO     | intersect: -36696539465.926414
[2025-06-05 06:22:19] 2025-06-05 10:22:06,988 | INFO     | chi2: 2.6002403329892334
[2025-06-05 06:22:19] 2025-06-05 10:22:06,988 | INFO     | sum of square deviations: 850841615.6000012
[2025-06-05 06:22:19] 2025-06-05 10:22:06,989 | INFO     | sum of deviations: 27382645281.0
[2025-06-05 06:22:19] 2025-06-05 10:22:06,989 | INFO     | mean x: 1749114345.6
[2025-06-05 06:22:19] 2025-06-05 10:22:06,989 | INFO     | mean y: 2113092.6071428573
[2025-06-05 06:22:19] 2025-06-05 10:22:06,989 | INFO     | -- intersect: -56289653557.40341
[2025-06-05 06:22:19] 2025-06-05 10:22:06,989 | INFO     | intersect: -56289653557.40341
[2025-06-05 06:22:19] 2025-06-05 10:22:06,990 | INFO     | chi2: 1.9305088222793452
[2025-06-05 06:22:19] 2025-06-05 10:22:06,990 | INFO     | current chi2=1.9305088222793452 (change=25.75652343412294 %)
[2025-06-05 06:22:19] 2025-06-05 10:22:06,990 | INFO     | sum of square deviations: 762891265.7481488
[2025-06-05 06:22:19] 2025-06-05 10:22:06,991 | INFO     | sum of deviations: 26217815108.014816
[2025-06-05 06:22:19] 2025-06-05 10:22:06,991 | INFO     | mean x: 1749114193.0962963
[2025-06-05 06:22:19] 2025-06-05 10:22:06,991 | INFO     | mean y: 2111059.2296296298
[2025-06-05 06:22:19] 2025-06-05 10:22:06,991 | INFO     | -- intersect: -60108621067.755005
[2025-06-05 06:22:19] 2025-06-05 10:22:06,991 | INFO     | intersect: -60108621067.755005
[2025-06-05 06:22:19] 2025-06-05 10:22:06,991 | INFO     | chi2: 1.9301414737961302
[2025-06-05 06:22:19] 2025-06-05 10:22:06,991 | INFO     | current chi2=1.9301414737961302 (change=0.01902858349962009 %)
[2025-06-05 06:22:19] 2025-06-05 10:22:06,991 | INFO     | right removable region: 134
[2025-06-05 06:22:19] 2025-06-05 10:22:06,992 | INFO     | sum of square deviations: 850833075.6000012
[2025-06-05 06:22:19] 2025-06-05 10:22:06,992 | INFO     | sum of deviations: -5180923219.6
[2025-06-05 06:22:19] 2025-06-05 10:22:06,993 | INFO     | mean x: 1749114650.6
[2025-06-05 06:22:19] 2025-06-05 10:22:06,993 | INFO     | mean y: 2141304.2928571426
[2025-06-05 06:22:19] 2025-06-05 10:22:06,993 | INFO     | -- intersect: 10652912844.463182
[2025-06-05 06:22:19] 2025-06-05 10:22:06,993 | INFO     | intersect: 10652912844.463182
[2025-06-05 06:22:19] 2025-06-05 10:22:06,993 | INFO     | chi2: 0.7906858979022253
[2025-06-05 06:22:19] 2025-06-05 10:22:06,993 | INFO     | current chi2=0.7906858979022253 (change=69.59181473070785 %)
[2025-06-05 06:22:19] 2025-06-05 10:22:06,993 | INFO     | sum of square deviations: 762882970.5481482
[2025-06-05 06:22:19] 2025-06-05 10:22:06,994 | INFO     | sum of deviations: -5197008416.548148
[2025-06-05 06:22:19] 2025-06-05 10:22:06,994 | INFO     | mean x: 1749114803.1037037
[2025-06-05 06:22:19] 2025-06-05 10:22:06,994 | INFO     | mean y: 2141213.8962962963
[2025-06-05 06:22:19] 2025-06-05 10:22:06,994 | INFO     | -- intersect: 11917683576.452145
[2025-06-05 06:22:19] 2025-06-05 10:22:06,995 | INFO     | intersect: 11917683576.452145
[2025-06-05 06:22:19] 2025-06-05 10:22:06,995 | INFO     | chi2: 0.7581741036821412
[2025-06-05 06:22:19] 2025-06-05 10:22:06,995 | INFO     | current chi2=0.7581741036821412 (change=4.111846980746892 %)
[2025-06-05 06:22:19] 2025-06-05 10:22:06,995 | INFO     | left removable region: 20
[2025-06-05 06:22:19] 2025-06-05 10:22:06,995 | INFO     | sum of square deviations: 459371643.236842
[2025-06-05 06:22:19] 2025-06-05 10:22:06,996 | INFO     | sum of deviations: 1502022199.1315787
[2025-06-05 06:22:19] 2025-06-05 10:22:06,996 | INFO     | mean x: 1749114772.6052632
[2025-06-05 06:22:19] 2025-06-05 10:22:06,996 | INFO     | mean y: 2157831.1140350876
[2025-06-05 06:22:19] 2025-06-05 10:22:06,996 | INFO     | -- intersect: -5716978854.751351
[2025-06-05 06:22:19] 2025-06-05 10:22:06,996 | INFO     | intersect: -5716978854.751351
[2025-06-05 06:22:19] 2025-06-05 10:22:06,996 | INFO     | chi2: 0.05547080592014824
[2025-06-05 06:22:19] 2025-06-05 10:22:06,996 | INFO     | -- intersect: -5716978854.751351
[2025-06-05 06:22:19] 2025-06-05 10:22:06,997 | INFO     | current memory leak: 3.27 B/s (using 114 data points, chi2=0.06)
[2025-06-05 06:22:19] 2025-06-05 10:22:06,997 | INFO     | ..............................
[2025-06-05 06:22:19] 2025-06-05 10:22:06,997 | INFO     | . Timing measurements:
[2025-06-05 06:22:19] 2025-06-05 10:22:06,997 | INFO     | . get job = 0 s
[2025-06-05 06:22:19] 2025-06-05 10:22:06,997 | INFO     | . initial setup = 4 s
[2025-06-05 06:22:19] 2025-06-05 10:22:06,997 | INFO     | . payload setup = 10 s
[2025-06-05 06:22:19] 2025-06-05 10:22:06,998 | INFO     | . stage-in = 0 s
[2025-06-05 06:22:19] 2025-06-05 10:22:06,998 | INFO     | . payload execution = 8816 s
[2025-06-05 06:22:19] 2025-06-05 10:22:06,998 | INFO     | . stage-out = 1 s
[2025-06-05 06:22:19] 2025-06-05 10:22:06,998 | INFO     | . log creation = 0 s
[2025-06-05 06:22:19] 2025-06-05 10:22:06,998 | INFO     | ..............................
[2025-06-05 06:22:19] 2025-06-05 10:22:07,099 | INFO     | 
[2025-06-05 06:22:19] 2025-06-05 10:22:07,099 | INFO     | job summary report
[2025-06-05 06:22:19] 2025-06-05 10:22:07,099 | INFO     | --------------------------------------------------
[2025-06-05 06:22:19] 2025-06-05 10:22:07,099 | INFO     | PanDA job id: 6668688178
[2025-06-05 06:22:19] 2025-06-05 10:22:07,099 | INFO     | task id: 44871837
[2025-06-05 06:22:19] 2025-06-05 10:22:07,099 | INFO     | errors: (none)
[2025-06-05 06:22:19] 2025-06-05 10:22:07,099 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:22:19] 2025-06-05 10:22:07,099 | INFO     | pilot state: finished 
[2025-06-05 06:22:19] 2025-06-05 10:22:07,099 | INFO     | transexitcode: 0
[2025-06-05 06:22:19] 2025-06-05 10:22:07,099 | INFO     | exeerrorcode: 0
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | exeerrordiag: 
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | exitcode: 0
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | exitmsg: OK
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | cpuconsumptiontime: 52664 s
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | nevents: 400
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | neventsw: 0
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | pid: 1021718
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | pgrp: 1021718
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | corecount: 8
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | event service: False
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | sizes: {0: 2397221, 1: 2397420, 7: 2397626, 11: 2397654, 8830: 2425503, 8832: 2434628, 8840: 2434742}
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | --------------------------------------------------
[2025-06-05 06:22:19] 2025-06-05 10:22:07,100 | INFO     | 
[2025-06-05 06:22:19] 2025-06-05 10:22:07,101 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-05 06:22:19] 2025-06-05 10:22:07,118 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,119 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,120 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:22:19] 2025-06-05 10:22:07,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:22:19] 2025-06-05 10:22:07,120 | INFO     | job 6668688178 has completed (purged errors)
[2025-06-05 06:22:19] 2025-06-05 10:22:07,120 | INFO     | overall cleanup function is called
[2025-06-05 06:22:19] 2025-06-05 10:22:08,128 | INFO     | --- collectZombieJob: --- 10, [1021718]
[2025-06-05 06:22:19] 2025-06-05 10:22:08,129 | INFO     | zombie collector waiting for pid 1021718
[2025-06-05 06:22:19] 2025-06-05 10:22:08,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:22:19] 2025-06-05 10:22:08,130 | INFO     | collected zombie processes
[2025-06-05 06:22:19] 2025-06-05 10:22:08,130 | INFO     | will attempt to kill all subprocesses of pid=1021718
[2025-06-05 06:22:19] 2025-06-05 10:22:08,445 | INFO     | process IDs to be killed: [1021718] (in reverse order)
[2025-06-05 06:22:19] 2025-06-05 10:22:08,541 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:22:19] 2025-06-05 10:22:08,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:22:19] 2025-06-05 10:22:08,558 | INFO     | did not find any defunct processes belonging to 1021718
[2025-06-05 06:22:19] 2025-06-05 10:22:08,575 | INFO     | did not find any defunct processes belonging to 1021718
[2025-06-05 06:22:19] 2025-06-05 10:22:08,575 | INFO     | ready for new job
[2025-06-05 06:22:19] 2025-06-05 10:22:08,575 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:22:19] 2025-06-05 10:22:08,578 | INFO     | **************************************
[2025-06-05 06:22:19] 2025-06-05 10:22:08,579 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:22:19] 2025-06-05 10:22:08,579 | INFO     | **************************************
[2025-06-05 06:22:19] 2025-06-05 10:22:08,579 | INFO     | 
[2025-06-05 06:22:19] 2025-06-05 10:22:08,602 | INFO     | architecture information:
[2025-06-05 06:22:19] 2025-06-05 10:22:08,603 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:22:19] 2025-06-05 10:22:08,617 | INFO     | cat /etc/os-release:
[2025-06-05 06:22:19] NAME="CentOS Linux"
[2025-06-05 06:22:19] VERSION="7 (Core)"
[2025-06-05 06:22:19] ID="centos"
[2025-06-05 06:22:19] ID_LIKE="rhel fedora"
[2025-06-05 06:22:19] VERSION_ID="7"
[2025-06-05 06:22:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:22:19] ANSI_COLOR="0;31"
[2025-06-05 06:22:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:22:19] HOME_URL="https://www.centos.org/"
[2025-06-05 06:22:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:22:19] 
[2025-06-05 06:22:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:22:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:22:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:22:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:22:19] 
[2025-06-05 06:22:19] 2025-06-05 10:22:08,617 | INFO     | **************************************
[2025-06-05 06:22:19] 2025-06-05 10:22:09,120 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-05 06:22:19] 2025-06-05 10:22:09,137 | INFO     | sufficient remaining disk space (96041172992 B)
[2025-06-05 06:22:19] 2025-06-05 10:22:09,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:22:19] 2025-06-05 10:22:09,137 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:22:19] 2025-06-05 10:22:09,138 | INFO     | update_server=False
[2025-06-05 06:22:19] 2025-06-05 10:22:09,138 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:22:19] 2025-06-05 10:22:09,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:22:19] 2025-06-05 10:22:09,138 | INFO     | aborting loop
[2025-06-05 06:22:19] 2025-06-05 10:22:09,383 | INFO     | all job control threads have been joined
[2025-06-05 06:22:19] 2025-06-05 10:22:09,385 | INFO     | PID=1003776 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 06:22:19] 2025-06-05 10:22:09,385 | INFO     | .. there are 20 such processes running
[2025-06-05 06:22:19] 2025-06-05 10:22:09,386 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:22:19] 2025-06-05 10:22:09,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:22:19] 2025-06-05 10:22:09,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:22:19] 2025-06-05 10:22:09,429 | INFO     | all data control threads have been joined
[2025-06-05 06:22:19] 2025-06-05 10:22:09,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:22:19] 2025-06-05 10:22:09,668 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:22:19] 2025-06-05 10:22:10,142 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:10,143 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:10,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:10,386 | INFO     | all payload control threads have been joined
[2025-06-05 06:22:19] 2025-06-05 10:22:10,388 | INFO     | [job] control thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:10,435 | INFO     | [data] control thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:10,593 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:10,983 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:11,015 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:11,020 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:11,200 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:11,232 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:11,391 | INFO     | [payload] control thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:11,475 | INFO     | [job] validate thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:11,514 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:12,111 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:22:19] 2025-06-05 10:22:13,117 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:13,675 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:22:19] 2025-06-05 10:22:13,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843915908928)>', '<ExcThread(monitor, started 139843413710592)>']
[2025-06-05 06:22:19] 2025-06-05 10:22:14,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:22:19] 2025-06-05 10:22:14,411 | INFO     | [monitor] control thread has ended
[2025-06-05 06:22:19] 2025-06-05 10:22:18,717 | INFO     | all workflow threads have been joined
[2025-06-05 06:22:19] 2025-06-05 10:22:18,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:22:19] 2025-06-05 10:22:18,718 | INFO     | traces error code: 0
[2025-06-05 06:22:19] 2025-06-05 10:22:18,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:22:19] 2025-06-05 10:22:18,888 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:22:19] 2025-06-05 10:22:18,891 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:22:19] 2025-06-05 10:22:18,893 [wrapper] pilotpid: 1003776
[2025-06-05 06:22:19] 2025-06-05 10:22:18,896 [wrapper] Pilot exit status: 0
[2025-06-05 06:22:19] 2025-06-05 10:22:18,910 [wrapper] pandaids: 6668688178
[2025-06-05 06:22:19] 2025-06-05 10:22:18,987 [wrapper] cleanup supervisor_pilot 1483328 1003777
[2025-06-05 06:22:19] 2025-06-05 10:22:18,990 [wrapper] Test setup, not cleaning
[2025-06-05 06:22:19] 2025-06-05 10:22:18,993 [wrapper] apfmon messages muted
[2025-06-05 06:22:19] 2025-06-05 10:22:18,996 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:22:19] 2025-06-05 10:22:18,999 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:22:19]  *** Error codes and diagnostics ***
[2025-06-05 06:22:19]     "exeErrorCode": 0,
[2025-06-05 06:22:19]     "exeErrorDiag": "",
[2025-06-05 06:22:19]     "pilotErrorCode": 0,
[2025-06-05 06:22:19]     "pilotErrorDiag": "",
[2025-06-05 06:22:19]  *** Listing of results directory ***
[2025-06-05 06:22:19] total 420384
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas    495897 May 28 11:15 pilot3.tar.gz
[2025-06-05 06:22:19] -rwx------. 1 boincer umatlas     37140 May 28 12:10 runpilot2-wrapper.sh
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas      5111 May 28 12:10 queuedata.json
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas       100 Jun  5 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:22:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 03:54 run_atlas
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas       105 Jun  5 03:54 job.xml
[2025-06-05 06:22:19] -rw-r--r--. 2 boincer umatlas 227775709 Jun  5 03:54 EVNT.44871834._003383.pool.root.1
[2025-06-05 06:22:19] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 03:54 shared
[2025-06-05 06:22:19] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 03:54 input.tar.gz
[2025-06-05 06:22:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 03:54 start_atlas.sh
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas         0 Jun  5 03:54 boinc_lockfile
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 03:54 pandaJob.out
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas    983087 Jun  5 03:54 agis_schedconf.cvmfs.json
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas   1598969 Jun  5 03:54 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:22:19] drwx------. 4 boincer umatlas      4096 Jun  5 03:54 pilot3
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas 196690708 Jun  5 06:21 HITS.44871837._086866.pool.root.1
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas       529 Jun  5 06:21 boinc_task_state.xml
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas        95 Jun  5 06:21 pilot_heartbeat.json
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas      1041 Jun  5 06:21 memory_monitor_summary.json
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas    345856 Jun  5 06:21 log.44871837._086866.job.log.tgz.1
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas      7722 Jun  5 06:22 heartbeat.json
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas      6859 Jun  5 06:22 init_data.xml
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 06:22 boinc_mmap_file
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas      4749 Jun  5 06:22 pilotlog.txt
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas        27 Jun  5 06:22 wrapper_checkpoint.txt
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas    742852 Jun  5 06:22 log.44871837._086866.job.log.1
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas       357 Jun  5 06:22 output.list
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas       620 Jun  5 06:22 runtime_log
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas   1105920 Jun  5 06:22 result.tar.gz
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas      8669 Jun  5 06:22 runtime_log.err
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas       654 Jun  5 06:22 MIkMDmcXYe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyYcKDm5Hn0zm.diag
[2025-06-05 06:22:19] -rw-r--r--. 1 boincer umatlas     20932 Jun  5 06:22 stderr.txt
[2025-06-05 06:22:19] HITS file was successfully produced:
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas 196690708 Jun  5 06:21 shared/HITS.pool.root.1
[2025-06-05 06:22:19]  *** Contents of shared directory: ***
[2025-06-05 06:22:19] total 416124
[2025-06-05 06:22:19] -rw-r--r--. 2 boincer umatlas 227775709 Jun  5 03:54 ATLAS.root_0
[2025-06-05 06:22:19] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 03:54 input.tar.gz
[2025-06-05 06:22:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 03:54 start_atlas.sh
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas 196690708 Jun  5 06:21 HITS.pool.root.1
[2025-06-05 06:22:19] -rw-------. 1 boincer umatlas   1105920 Jun  5 06:22 result.tar.gz
06:22:20 (998297): run_atlas exited; CPU time 52969.183958
06:22:20 (998297): called boinc_finish(0)

</stderr_txt>
]]>

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