Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:49:39 (16822): wrapper (7.7.26015): starting
15:49:39 (16822): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 15:49:39] Arguments: --nthreads 8
[2025-06-05 15:49:39] Threads: 8
[2025-06-05 15:49:39] Checking for CVMFS
[2025-06-05 15:49:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 15:49:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 15:49:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 15:49:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 15:49:42] 2.11.2.0 2200 34726 92096 146820 1 159 17455357 25165825 2858 130560 0 18373499 99.761 21724601 2233 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 15:49:42] CVMFS is ok
[2025-06-05 15:49:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 15:49:42] Checking for apptainer binary...
[2025-06-05 15:49:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 15:49:42] Running /usr/bin/apptainer --version
[2025-06-05 15:49:42] apptainer version 1.3.2-1.el7
[2025-06-05 15:49:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 15:49:54] cg-vwn296.simple-grid.lan
[2025-06-05 15:49:54] apptainer works
[2025-06-05 15:49:54] Set ATHENA_PROC_NUMBER=8
[2025-06-05 15:49:54] Set ATHENA_CORE_NUMBER=8
[2025-06-05 15:49:54] Starting ATLAS job with PandaID=6667883355
[2025-06-05 15:49:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:23:20]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:23:20] 2025-06-05 19:06:58,542 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 21:23:20] 2025-06-05 19:06:58,543 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:23:20] 2025-06-05 19:06:58,543 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:23:20] 2025-06-05 19:06:58,550 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:23:20] 2025-06-05 19:06:58,550 | INFO     | sum of square deviations: 9148487810.0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,554 | INFO     | sum of deviations: 33885133145.999996
[2025-06-05 21:23:20] 2025-06-05 19:06:58,554 | INFO     | mean x: 1749140899.0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,554 | INFO     | mean y: 2482129.4692556635
[2025-06-05 21:23:20] 2025-06-05 19:06:58,554 | INFO     | -- intersect: -6476170242.887038
[2025-06-05 21:23:20] 2025-06-05 19:06:58,554 | INFO     | intersect: -6476170242.887038
[2025-06-05 21:23:20] 2025-06-05 19:06:58,555 | INFO     | chi2: 2.446134111297226
[2025-06-05 21:23:20] 2025-06-05 19:06:58,556 | INFO     | sum of square deviations: 8711530780.0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,559 | INFO     | sum of deviations: 53704217335.50001
[2025-06-05 21:23:20] 2025-06-05 19:06:58,559 | INFO     | mean x: 1749140746.5
[2025-06-05 21:23:20] 2025-06-05 19:06:58,559 | INFO     | mean y: 2488952.5361842103
[2025-06-05 21:23:20] 2025-06-05 19:06:58,559 | INFO     | -- intersect: -10780487905.684217
[2025-06-05 21:23:20] 2025-06-05 19:06:58,559 | INFO     | intersect: -10780487905.684217
[2025-06-05 21:23:20] 2025-06-05 19:06:58,560 | INFO     | chi2: 1.6725973016422142
[2025-06-05 21:23:20] 2025-06-05 19:06:58,560 | INFO     | current chi2=1.6725973016422142 (change=31.62282910338028 %)
[2025-06-05 21:23:20] 2025-06-05 19:06:58,561 | INFO     | sum of square deviations: 8288713550.0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,564 | INFO     | sum of deviations: 52731060881.0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,564 | INFO     | mean x: 1749140594.0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,564 | INFO     | mean y: 2488601.5117056854
[2025-06-05 21:23:20] 2025-06-05 19:06:58,564 | INFO     | -- intersect: -11125177784.262054
[2025-06-05 21:23:20] 2025-06-05 19:06:58,564 | INFO     | intersect: -11125177784.262054
[2025-06-05 21:23:20] 2025-06-05 19:06:58,565 | INFO     | chi2: 1.673080522877598
[2025-06-05 21:23:20] 2025-06-05 19:06:58,565 | INFO     | current chi2=1.673080522877598 (change=-0.02889047082100146 %)
[2025-06-05 21:23:20] 2025-06-05 19:06:58,565 | INFO     | right removable region: 298
[2025-06-05 21:23:20] 2025-06-05 19:06:58,566 | INFO     | sum of square deviations: 8711530780.0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,572 | INFO     | sum of deviations: -19677733342.5
[2025-06-05 21:23:20] 2025-06-05 19:06:58,572 | INFO     | mean x: 1749141051.5
[2025-06-05 21:23:20] 2025-06-05 19:06:58,572 | INFO     | mean y: 2500707.8190789474
[2025-06-05 21:23:20] 2025-06-05 19:06:58,575 | INFO     | -- intersect: 3953486138.3999786
[2025-06-05 21:23:20] 2025-06-05 19:06:58,576 | INFO     | intersect: 3953486138.3999786
[2025-06-05 21:23:20] 2025-06-05 19:06:58,576 | INFO     | chi2: 0.8564467444073146
[2025-06-05 21:23:20] 2025-06-05 19:06:58,577 | INFO     | current chi2=0.8564467444073146 (change=64.98774370334395 %)
[2025-06-05 21:23:20] 2025-06-05 19:06:58,577 | INFO     | sum of square deviations: 8288713550.0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,580 | INFO     | sum of deviations: -15893460879.0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,580 | INFO     | mean x: 1749141204.0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,580 | INFO     | mean y: 2499323.6120401337
[2025-06-05 21:23:20] 2025-06-05 19:06:58,580 | INFO     | -- intersect: 3356446486.8145804
[2025-06-05 21:23:20] 2025-06-05 19:06:58,581 | INFO     | intersect: 3356446486.8145804
[2025-06-05 21:23:20] 2025-06-05 19:06:58,581 | INFO     | chi2: 0.8372321042715176
[2025-06-05 21:23:20] 2025-06-05 19:06:58,581 | INFO     | current chi2=0.8372321042715176 (change=2.243530057329375 %)
[2025-06-05 21:23:20] 2025-06-05 19:06:58,581 | INFO     | left removable region: 20
[2025-06-05 21:23:20] 2025-06-05 19:06:58,582 | INFO     | sum of square deviations: 6662039329.5
[2025-06-05 21:23:20] 2025-06-05 19:06:58,584 | INFO     | sum of deviations: 11391709983.999998
[2025-06-05 21:23:20] 2025-06-05 19:06:58,585 | INFO     | mean x: 1749141173.5
[2025-06-05 21:23:20] 2025-06-05 19:06:58,585 | INFO     | mean y: 2503621.158273381
[2025-06-05 21:23:20] 2025-06-05 19:06:58,585 | INFO     | -- intersect: -2988428732.145755
[2025-06-05 21:23:20] 2025-06-05 19:06:58,585 | INFO     | intersect: -2988428732.145755
[2025-06-05 21:23:20] 2025-06-05 19:06:58,585 | INFO     | chi2: 0.002260542337012222
[2025-06-05 21:23:20] 2025-06-05 19:06:58,586 | INFO     | -- intersect: -2988428732.145755
[2025-06-05 21:23:20] 2025-06-05 19:06:58,586 | INFO     | current memory leak: 1.71 B/s (using 278 data points, chi2=0.00)
[2025-06-05 21:23:20] 2025-06-05 19:06:58,587 | INFO     | ..............................
[2025-06-05 21:23:20] 2025-06-05 19:06:58,587 | INFO     | . Timing measurements:
[2025-06-05 21:23:20] 2025-06-05 19:06:58,587 | INFO     | . get job = 0 s
[2025-06-05 21:23:20] 2025-06-05 19:06:58,587 | INFO     | . initial setup = 2 s
[2025-06-05 21:23:20] 2025-06-05 19:06:58,587 | INFO     | . payload setup = 16 s
[2025-06-05 21:23:20] 2025-06-05 19:06:58,587 | INFO     | . stage-in = 0 s
[2025-06-05 21:23:20] 2025-06-05 19:06:58,587 | INFO     | . payload execution = 18856 s
[2025-06-05 21:23:20] 2025-06-05 19:06:58,588 | INFO     | . stage-out = 4 s
[2025-06-05 21:23:20] 2025-06-05 19:06:58,588 | INFO     | . log creation = 1 s
[2025-06-05 21:23:20] 2025-06-05 19:06:58,588 | INFO     | ..............................
[2025-06-05 21:23:20] 2025-06-05 19:06:58,956 | INFO     | 
[2025-06-05 21:23:20] 2025-06-05 19:06:58,957 | INFO     | job summary report
[2025-06-05 21:23:20] 2025-06-05 19:06:58,957 | INFO     | --------------------------------------------------
[2025-06-05 21:23:20] 2025-06-05 19:06:58,957 | INFO     | PanDA job id: 6667883355
[2025-06-05 21:23:20] 2025-06-05 19:06:58,957 | INFO     | task id: 44871837
[2025-06-05 21:23:20] 2025-06-05 19:06:58,957 | INFO     | errors: (none)
[2025-06-05 21:23:20] 2025-06-05 19:06:58,957 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:23:20] 2025-06-05 19:06:58,957 | INFO     | pilot state: finished 
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | transexitcode: 0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | exeerrorcode: 0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | exeerrordiag: 
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | exitcode: 0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | exitmsg: OK
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | cpuconsumptiontime: 72436 s
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | nevents: 400
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | neventsw: 0
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | pid: 30451
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | pgrp: 30451
[2025-06-05 21:23:20] 2025-06-05 19:06:58,958 | INFO     | corecount: 8
[2025-06-05 21:23:20] 2025-06-05 19:06:58,959 | INFO     | event service: False
[2025-06-05 21:23:20] 2025-06-05 19:06:58,959 | INFO     | sizes: {0: 2396562, 1: 2397419, 2: 2397419, 12: 2397447, 13: 2397681, 23: 2397737, 18877: 2429708, 18883: 2438651, 18884: 2438707, 18972: 2438877}
[2025-06-05 21:23:20] 2025-06-05 19:06:58,959 | INFO     | --------------------------------------------------
[2025-06-05 21:23:20] 2025-06-05 19:06:58,959 | INFO     | 
[2025-06-05 21:23:20] 2025-06-05 19:06:58,959 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-06-05 21:23:20] 2025-06-05 19:06:59,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,392 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,392 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,392 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,392 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,393 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,394 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,394 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:23:20] 2025-06-05 19:06:59,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:23:20] 2025-06-05 19:06:59,394 | INFO     | job 6667883355 has completed (purged errors)
[2025-06-05 21:23:20] 2025-06-05 19:06:59,394 | INFO     | overall cleanup function is called
[2025-06-05 21:23:20] 2025-06-05 19:06:59,898 | INFO     | PID=20502 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 21:23:20] 2025-06-05 19:06:59,899 | INFO     | .. there are 9 such processes running
[2025-06-05 21:23:20] 2025-06-05 19:07:00,403 | INFO     | --- collectZombieJob: --- 10, [30451]
[2025-06-05 21:23:20] 2025-06-05 19:07:00,404 | INFO     | zombie collector waiting for pid 30451
[2025-06-05 21:23:20] 2025-06-05 19:07:00,404 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:23:20] 2025-06-05 19:07:00,404 | INFO     | collected zombie processes
[2025-06-05 21:23:20] 2025-06-05 19:07:00,404 | INFO     | will attempt to kill all subprocesses of pid=30451
[2025-06-05 21:23:20] 2025-06-05 19:07:00,521 | INFO     | process IDs to be killed: [30451] (in reverse order)
[2025-06-05 21:23:20] 2025-06-05 19:07:01,586 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:23:20] 2025-06-05 19:07:01,586 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:23:20] 2025-06-05 19:07:01,590 | INFO     | did not find any defunct processes belonging to 30451
[2025-06-05 21:23:20] 2025-06-05 19:07:01,594 | INFO     | did not find any defunct processes belonging to 30451
[2025-06-05 21:23:20] 2025-06-05 19:07:01,595 | INFO     | ready for new job
[2025-06-05 21:23:20] 2025-06-05 19:07:01,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:23:20] 2025-06-05 19:07:01,606 | INFO     | **************************************
[2025-06-05 21:23:20] 2025-06-05 19:07:01,606 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:23:20] 2025-06-05 19:07:01,606 | INFO     | **************************************
[2025-06-05 21:23:20] 2025-06-05 19:07:01,606 | INFO     | 
[2025-06-05 21:23:20] 2025-06-05 19:07:01,607 | INFO     | pilot is running in a VM
[2025-06-05 21:23:20] 2025-06-05 19:07:01,607 | INFO     | architecture information:
[2025-06-05 21:23:20] 2025-06-05 19:07:01,632 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:23:20] 2025-06-05 19:07:01,850 | INFO     | cat /etc/os-release:
[2025-06-05 21:23:20] NAME="CentOS Linux"
[2025-06-05 21:23:20] VERSION="7 (Core)"
[2025-06-05 21:23:20] ID="centos"
[2025-06-05 21:23:20] ID_LIKE="rhel fedora"
[2025-06-05 21:23:20] VERSION_ID="7"
[2025-06-05 21:23:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:23:20] ANSI_COLOR="0;31"
[2025-06-05 21:23:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:23:20] HOME_URL="https://www.centos.org/"
[2025-06-05 21:23:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:23:20] 
[2025-06-05 21:23:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:23:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:23:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:23:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:23:20] 
[2025-06-05 21:23:20] 2025-06-05 19:07:01,851 | INFO     | **************************************
[2025-06-05 21:23:20] 2025-06-05 19:07:02,354 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-06-05 21:23:20] 2025-06-05 19:07:02,613 | INFO     | sufficient remaining disk space (497479057408 B)
[2025-06-05 21:23:20] 2025-06-05 19:07:02,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:23:20] 2025-06-05 19:07:02,613 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:23:20] 2025-06-05 19:07:02,613 | INFO     | update_server=False
[2025-06-05 21:23:20] 2025-06-05 19:07:02,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:23:20] 2025-06-05 19:07:02,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:23:20] 2025-06-05 19:07:02,620 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 21:23:20] 2025-06-05 19:07:02,620 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:23:20] 2025-06-05 19:07:02,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:23:20] 2025-06-05 19:07:02,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:23:20] 2025-06-05 19:07:02,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:23:20] 2025-06-05 19:07:03,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:23:20] 2025-06-05 19:07:03,067 | INFO     | aborting loop
[2025-06-05 21:23:20] 2025-06-05 19:07:03,152 | INFO     | all payload control threads have been joined
[2025-06-05 21:23:20] 2025-06-05 19:07:03,599 | INFO     | all data control threads have been joined
[2025-06-05 21:23:20] 2025-06-05 19:07:03,619 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:03,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:23:20] 2025-06-05 19:07:03,875 | INFO     | [job] validate thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:04,022 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:04,073 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:04,158 | INFO     | [payload] control thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:04,262 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:04,279 | INFO     | all job control threads have been joined
[2025-06-05 21:23:20] 2025-06-05 19:07:04,292 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:04,605 | INFO     | [data] control thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:04,622 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:04,669 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:04,739 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:04,847 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:05,041 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:05,050 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:05,286 | INFO     | [job] control thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:06,632 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:23:20] 2025-06-05 19:07:07,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114593429312)>', '<ExcThread(monitor, started 140114156046080)>']
[2025-06-05 21:23:20] 2025-06-05 19:07:07,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:23:20] 2025-06-05 19:07:07,651 | INFO     | [monitor] control thread has ended
[2025-06-05 21:23:20] 2025-06-05 19:07:12,425 | INFO     | all workflow threads have been joined
[2025-06-05 21:23:20] 2025-06-05 19:07:12,426 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:23:20] 2025-06-05 19:07:12,426 | INFO     | traces error code: 0
[2025-06-05 21:23:20] 2025-06-05 19:07:12,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:23:20] 2025-06-05 19:07:13,032 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:23:20] 2025-06-05 19:07:13,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:23:20] 2025-06-05 19:07:13,159 [wrapper] pilotpid: 20502
[2025-06-05 21:23:20] 2025-06-05 19:07:13,286 [wrapper] Pilot exit status: 0
[2025-06-05 21:23:20] 2025-06-05 19:07:13,805 [wrapper] pandaids: 6667883355
[2025-06-05 21:23:20] 2025-06-05 19:07:14,646 [wrapper] cleanup supervisor_pilot  3385 20503
[2025-06-05 21:23:20] 2025-06-05 19:07:14,717 [wrapper] Test setup, not cleaning
[2025-06-05 21:23:20] 2025-06-05 19:07:14,781 [wrapper] apfmon messages muted
[2025-06-05 21:23:20] 2025-06-05 19:07:14,831 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:23:20] 2025-06-05 19:07:14,905 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:23:20]  *** Error codes and diagnostics ***
[2025-06-05 21:23:20]     "exeErrorCode": 0,
[2025-06-05 21:23:20]     "exeErrorDiag": "",
[2025-06-05 21:23:20]     "pilotErrorCode": 0,
[2025-06-05 21:23:20]     "pilotErrorDiag": "",
[2025-06-05 21:23:20]  *** Listing of results directory ***
[2025-06-05 21:23:20] total 418312
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc      5111 May 28 03:30 queuedata.json
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc    495897 May 28 03:31 pilot3.tar.gz
[2025-06-05 21:23:20] -rwx------. 1 boinc boinc     37140 May 28 03:34 runpilot2-wrapper.sh
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc       100 Jun  5 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:23:20] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 15:49 run_atlas
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc       105 Jun  5 15:49 job.xml
[2025-06-05 21:23:20] -rw-r--r--. 2 boinc boinc 223956462 Jun  5 15:49 EVNT.44871834._002999.pool.root.1
[2025-06-05 21:23:20] drwxrwx--x. 2 boinc boinc        68 Jun  5 15:49 shared
[2025-06-05 21:23:20] -rw-r--r--. 2 boinc boinc    508880 Jun  5 15:49 input.tar.gz
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc      6392 Jun  5 15:49 init_data.xml
[2025-06-05 21:23:20] -rw-r--r--. 2 boinc boinc     15093 Jun  5 15:49 start_atlas.sh
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc         0 Jun  5 15:49 boinc_lockfile
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc      2558 Jun  5 15:49 pandaJob.out
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc    983210 Jun  5 15:50 agis_schedconf.cvmfs.json
[2025-06-05 21:23:20] drwx------. 4 boinc boinc      4096 Jun  5 15:50 pilot3
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc 196480239 Jun  5 21:04 HITS.44871837._076660.pool.root.1
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc       531 Jun  5 21:04 boinc_task_state.xml
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc      1018 Jun  5 21:05 memory_monitor_summary.json
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc   1598969 Jun  5 21:05 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc    417144 Jun  5 21:05 log.44871837._076660.job.log.tgz.1
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc        95 Jun  5 21:06 pilot_heartbeat.json
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc      7687 Jun  5 21:06 heartbeat.json
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc      4540 Jun  5 21:07 pilotlog.txt
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc   1635015 Jun  5 21:07 log.44871837._076660.job.log.1
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc       357 Jun  5 21:07 output.list
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc       620 Jun  5 21:07 runtime_log
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc   2068480 Jun  5 21:07 result.tar.gz
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc      8673 Jun  5 21:07 runtime_log.err
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc       657 Jun  5 21:07 GVHODmVrKe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmhjSKDmeGCIXo.diag
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc      8192 Jun  5 21:23 boinc_mmap_file
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc        28 Jun  5 21:23 wrapper_checkpoint.txt
[2025-06-05 21:23:20] -rw-r--r--. 1 boinc boinc     20616 Jun  5 21:23 stderr.txt
[2025-06-05 21:23:20] HITS file was successfully produced:
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc 196480239 Jun  5 21:04 shared/HITS.pool.root.1
[2025-06-05 21:23:20]  *** Contents of shared directory: ***
[2025-06-05 21:23:20] total 413120
[2025-06-05 21:23:20] -rw-r--r--. 2 boinc boinc 223956462 Jun  5 15:49 ATLAS.root_0
[2025-06-05 21:23:20] -rw-r--r--. 2 boinc boinc    508880 Jun  5 15:49 input.tar.gz
[2025-06-05 21:23:20] -rw-r--r--. 2 boinc boinc     15093 Jun  5 15:49 start_atlas.sh
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc 196480239 Jun  5 21:04 HITS.pool.root.1
[2025-06-05 21:23:20] -rw-------. 1 boinc boinc   2068480 Jun  5 21:07 result.tar.gz
21:23:22 (16822): run_atlas exited; CPU time 72669.364285
21:23:22 (16822): called boinc_finish(0)

</stderr_txt>
]]>

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