Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:37:07 (10115): wrapper (7.7.26015): starting
03:37:07 (10115): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 03:37:07] Arguments: --nthreads 12
[2025-06-05 03:37:07] Threads: 12
[2025-06-05 03:37:07] Checking for CVMFS
[2025-06-05 03:37:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:37:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:37:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:37:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:37:07] 2.11.2.0 28623 29455 86988 146810 1 1 19215710 20275201 1 130560 0 14652595 99.983 5498569 6801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 03:37:07] CVMFS is ok
[2025-06-05 03:37:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 03:37:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 03:37:07] Further information can be found at the LHC@home message board.
[2025-06-05 03:37:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:37:07] Checking for apptainer binary...
[2025-06-05 03:37:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:37:07] Running /usr/bin/apptainer --version
[2025-06-05 03:37:07] apptainer version 1.3.2-1.el7
[2025-06-05 03:37:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:37:09] c-205-20.aglt2.org
[2025-06-05 03:37:09] apptainer works
[2025-06-05 03:37:09] Set ATHENA_PROC_NUMBER=12
[2025-06-05 03:37:09] Set ATHENA_CORE_NUMBER=12
[2025-06-05 03:37:09] Starting ATLAS job with PandaID=6667667664
[2025-06-05 03:37:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:07:01]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:07:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 05:07:01]  replicas=None
[2025-06-05 05:07:01]  scope=mc23_13p6TeV
[2025-06-05 05:07:01]  status=None
[2025-06-05 05:07:01]  status_code=0
[2025-06-05 05:07:01]  storage_token=
[2025-06-05 05:07:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667667664/log.44871837._074576.job.log.tgz.1
[2025-06-05 05:07:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/7b/log.44871837._074576.job.log.tgz.1
[2025-06-05 05:07:01]  workdir=None
[2025-06-05 05:07:01] ]
[2025-06-05 05:07:01] 2025-06-05 09:06:32,477 | INFO     | transferring file log.44871837._074576.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667667664/log.44871837._074576.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 05:07:01] 2025-06-05 09:06:32,477 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667667664/log.44871837._074576.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._074576.job
[2025-06-05 05:07:01] 2025-06-05 09:06:32,498 | INFO     | adding to output.list: log.44871837._074576.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/7b/log.44871837._074576.job.log.tg
[2025-06-05 05:07:01] 2025-06-05 09:06:32,499 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 05:07:01] 2025-06-05 09:06:32,500 | INFO     | summary of transferred files:
[2025-06-05 05:07:01] 2025-06-05 09:06:32,500 | INFO     |  -- lfn=log.44871837._074576.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 05:07:01] 2025-06-05 09:06:32,500 | INFO     | stage-out finished correctly
[2025-06-05 05:07:01] 2025-06-05 09:06:32,843 | WARNING  | process 20247 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 05:07:01] 2025-06-05 09:06:32,843 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667667664/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:07:01] 2025-06-05 09:06:32,937 | INFO     | number of running child processes to parent process 20247: 1
[2025-06-05 05:07:01] 2025-06-05 09:06:32,937 | INFO     | maximum number of monitored processes: 6
[2025-06-05 05:07:01] 2025-06-05 09:06:34,707 | INFO     | PID=13719 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 05:07:01] 2025-06-05 09:06:34,998 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 05:07:01] 2025-06-05 09:06:35,440 | INFO     | monitor loop #399: job 0:6667667664 is in state 'finished'
[2025-06-05 05:07:01] 2025-06-05 09:06:35,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:07:01] 2025-06-05 09:06:36,853 | INFO     | job 6667667664 has state=finished
[2025-06-05 05:07:01] 2025-06-05 09:06:36,853 | INFO     | preparing for final server update for job 6667667664 in state='finished'
[2025-06-05 05:07:01] 2025-06-05 09:06:36,861 | INFO     | this job has now completed (state=finished)
[2025-06-05 05:07:01] 2025-06-05 09:06:36,861 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 05:07:01] 2025-06-05 09:06:36,861 | INFO     | log transfer has been attempted: DONE
[2025-06-05 05:07:01] 2025-06-05 09:06:36,861 | INFO     | job 6667667664 has finished - writing final server update
[2025-06-05 05:07:01] 2025-06-05 09:06:36,862 | INFO     | total number of processed events: 400 (read)
[2025-06-05 05:07:01] 2025-06-05 09:06:36,863 | INFO     | executing command: lscpu
[2025-06-05 05:07:01] 2025-06-05 09:06:36,889 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 05:07:01] 2025-06-05 09:06:37,713 | INFO     | 5356s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 05:07:01] 2025-06-05 09:06:37,944 | INFO     | monitor loop #400: job 0:6667667664 is in state 'finished'
[2025-06-05 05:07:01] 2025-06-05 09:06:37,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:07:01] 2025-06-05 09:06:40,447 | INFO     | monitor loop #401: job 0:6667667664 is in state 'finished'
[2025-06-05 05:07:01] 2025-06-05 09:06:40,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:07:01] 2025-06-05 09:06:41,522 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 05:07:01] 2025-06-05 09:06:41,522 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667667664/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:07:01] 2025-06-05 09:06:41,523 | INFO     | extracted standard info from prmon json
[2025-06-05 05:07:01] 2025-06-05 09:06:41,523 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:07:01] 2025-06-05 09:06:41,523 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:07:01] 2025-06-05 09:06:41,524 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:07:01] 2025-06-05 09:06:41,524 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:07:01] 2025-06-05 09:06:41,527 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:07:01] 2025-06-05 09:06:41,528 | INFO     | sum of square deviations: 164765880.0
[2025-06-05 05:07:01] 2025-06-05 09:06:41,528 | INFO     | sum of deviations: -10270437752.0
[2025-06-05 05:07:01] 2025-06-05 09:06:41,529 | INFO     | mean x: 1749111820.0
[2025-06-05 05:07:01] 2025-06-05 09:06:41,529 | INFO     | mean y: 2758869.4444444445
[2025-06-05 05:07:01] 2025-06-05 09:06:41,529 | INFO     | -- intersect: 109031060533.58406
[2025-06-05 05:07:01] 2025-06-05 09:06:41,529 | INFO     | intersect: 109031060533.58406
[2025-06-05 05:07:01] 2025-06-05 09:06:41,529 | INFO     | chi2: 0.06623651609320717
[2025-06-05 05:07:01] 2025-06-05 09:06:41,529 | INFO     | -- intersect: 109031060533.58406
[2025-06-05 05:07:01] 2025-06-05 09:06:41,529 | INFO     | current memory leak: -62.33 B/s (using 81 data points, chi2=0.07)
[2025-06-05 05:07:01] 2025-06-05 09:06:41,530 | INFO     | ..............................
[2025-06-05 05:07:01] 2025-06-05 09:06:41,530 | INFO     | . Timing measurements:
[2025-06-05 05:07:01] 2025-06-05 09:06:41,530 | INFO     | . get job = 0 s
[2025-06-05 05:07:01] 2025-06-05 09:06:41,530 | INFO     | . initial setup = 2 s
[2025-06-05 05:07:01] 2025-06-05 09:06:41,530 | INFO     | . payload setup = 9 s
[2025-06-05 05:07:01] 2025-06-05 09:06:41,530 | INFO     | . stage-in = 0 s
[2025-06-05 05:07:01] 2025-06-05 09:06:41,530 | INFO     | . payload execution = 5317 s
[2025-06-05 05:07:01] 2025-06-05 09:06:41,531 | INFO     | . stage-out = 0 s
[2025-06-05 05:07:01] 2025-06-05 09:06:41,531 | INFO     | . log creation = 0 s
[2025-06-05 05:07:01] 2025-06-05 09:06:41,531 | INFO     | ..............................
[2025-06-05 05:07:01] 2025-06-05 09:06:41,615 | INFO     | 
[2025-06-05 05:07:01] 2025-06-05 09:06:41,615 | INFO     | job summary report
[2025-06-05 05:07:01] 2025-06-05 09:06:41,615 | INFO     | --------------------------------------------------
[2025-06-05 05:07:01] 2025-06-05 09:06:41,615 | INFO     | PanDA job id: 6667667664
[2025-06-05 05:07:01] 2025-06-05 09:06:41,615 | INFO     | task id: 44871837
[2025-06-05 05:07:01] 2025-06-05 09:06:41,616 | INFO     | errors: (none)
[2025-06-05 05:07:01] 2025-06-05 09:06:41,616 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:07:01] 2025-06-05 09:06:41,616 | INFO     | pilot state: finished 
[2025-06-05 05:07:01] 2025-06-05 09:06:41,616 | INFO     | transexitcode: 0
[2025-06-05 05:07:01] 2025-06-05 09:06:41,616 | INFO     | exeerrorcode: 0
[2025-06-05 05:07:01] 2025-06-05 09:06:41,616 | INFO     | exeerrordiag: 
[2025-06-05 05:07:01] 2025-06-05 09:06:41,617 | INFO     | exitcode: 0
[2025-06-05 05:07:01] 2025-06-05 09:06:41,617 | INFO     | exitmsg: OK
[2025-06-05 05:07:01] 2025-06-05 09:06:41,617 | INFO     | cpuconsumptiontime: 58090 s
[2025-06-05 05:07:01] 2025-06-05 09:06:41,617 | INFO     | nevents: 400
[2025-06-05 05:07:01] 2025-06-05 09:06:41,617 | INFO     | neventsw: 0
[2025-06-05 05:07:01] 2025-06-05 09:06:41,617 | INFO     | pid: 20247
[2025-06-05 05:07:01] 2025-06-05 09:06:41,617 | INFO     | pgrp: 20247
[2025-06-05 05:07:01] 2025-06-05 09:06:41,618 | INFO     | corecount: 12
[2025-06-05 05:07:01] 2025-06-05 09:06:41,618 | INFO     | event service: False
[2025-06-05 05:07:01] 2025-06-05 09:06:41,618 | INFO     | sizes: {0: 2397391, 1: 2397419, 5: 2397625, 11: 2397681, 5330: 2424041, 5333: 2432982, 5335: 2433166, 5342: 2433336}
[2025-06-05 05:07:01] 2025-06-05 09:06:41,618 | INFO     | --------------------------------------------------
[2025-06-05 05:07:01] 2025-06-05 09:06:41,618 | INFO     | 
[2025-06-05 05:07:01] 2025-06-05 09:06:41,618 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 05:07:01] 2025-06-05 09:06:41,640 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,640 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,640 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,640 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,643 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:07:01] 2025-06-05 09:06:41,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:07:01] 2025-06-05 09:06:41,643 | INFO     | job 6667667664 has completed (purged errors)
[2025-06-05 05:07:01] 2025-06-05 09:06:41,644 | INFO     | overall cleanup function is called
[2025-06-05 05:07:01] 2025-06-05 09:06:42,652 | INFO     | --- collectZombieJob: --- 10, [20247]
[2025-06-05 05:07:01] 2025-06-05 09:06:42,652 | INFO     | zombie collector waiting for pid 20247
[2025-06-05 05:07:01] 2025-06-05 09:06:42,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:07:01] 2025-06-05 09:06:42,652 | INFO     | collected zombie processes
[2025-06-05 05:07:01] 2025-06-05 09:06:42,653 | INFO     | will attempt to kill all subprocesses of pid=20247
[2025-06-05 05:07:01] 2025-06-05 09:06:42,745 | INFO     | process IDs to be killed: [20247] (in reverse order)
[2025-06-05 05:07:01] 2025-06-05 09:06:42,796 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:07:01] 2025-06-05 09:06:42,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:07:01] 2025-06-05 09:06:42,799 | INFO     | did not find any defunct processes belonging to 20247
[2025-06-05 05:07:01] 2025-06-05 09:06:42,802 | INFO     | did not find any defunct processes belonging to 20247
[2025-06-05 05:07:01] 2025-06-05 09:06:42,802 | INFO     | ready for new job
[2025-06-05 05:07:01] 2025-06-05 09:06:42,802 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:07:01] 2025-06-05 09:06:42,803 | INFO     | **************************************
[2025-06-05 05:07:01] 2025-06-05 09:06:42,803 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:07:01] 2025-06-05 09:06:42,803 | INFO     | **************************************
[2025-06-05 05:07:01] 2025-06-05 09:06:42,803 | INFO     | 
[2025-06-05 05:07:01] 2025-06-05 09:06:42,804 | INFO     | architecture information:
[2025-06-05 05:07:01] 2025-06-05 09:06:42,805 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:07:01] 2025-06-05 09:06:42,818 | INFO     | cat /etc/os-release:
[2025-06-05 05:07:01] NAME="CentOS Linux"
[2025-06-05 05:07:01] VERSION="7 (Core)"
[2025-06-05 05:07:01] ID="centos"
[2025-06-05 05:07:01] ID_LIKE="rhel fedora"
[2025-06-05 05:07:01] VERSION_ID="7"
[2025-06-05 05:07:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:07:01] ANSI_COLOR="0;31"
[2025-06-05 05:07:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:07:01] HOME_URL="https://www.centos.org/"
[2025-06-05 05:07:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:07:01] 
[2025-06-05 05:07:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:07:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:07:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:07:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:07:01] 
[2025-06-05 05:07:01] 2025-06-05 09:06:42,818 | INFO     | **************************************
[2025-06-05 05:07:01] 2025-06-05 09:06:43,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 05:07:01] 2025-06-05 09:06:43,336 | INFO     | sufficient remaining disk space (29393682432 B)
[2025-06-05 05:07:01] 2025-06-05 09:06:43,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:07:01] 2025-06-05 09:06:43,337 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:07:01] 2025-06-05 09:06:43,337 | INFO     | update_server=False
[2025-06-05 05:07:01] 2025-06-05 09:06:43,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:07:01] 2025-06-05 09:06:43,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:07:01] 2025-06-05 09:06:43,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:07:01] 2025-06-05 09:06:43,338 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:07:01] 2025-06-05 09:06:43,339 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:07:01] 2025-06-05 09:06:43,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:07:01] 2025-06-05 09:06:43,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:07:01] 2025-06-05 09:06:43,693 | INFO     | all job control threads have been joined
[2025-06-05 05:07:01] 2025-06-05 09:06:43,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:07:01] 2025-06-05 09:06:43,956 | INFO     | aborting loop
[2025-06-05 05:07:01] 2025-06-05 09:06:44,186 | INFO     | all payload control threads have been joined
[2025-06-05 05:07:01] 2025-06-05 09:06:44,228 | INFO     | all data control threads have been joined
[2025-06-05 05:07:01] 2025-06-05 09:06:44,343 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:44,344 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:44,698 | INFO     | [job] control thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:44,823 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:44,869 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:44,961 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:44,988 | INFO     | [job] validate thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:45,191 | INFO     | [payload] control thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:45,224 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:45,233 | INFO     | [data] control thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:45,343 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:45,502 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:45,505 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:45,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:07:01] 2025-06-05 09:06:45,840 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:49,608 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:54,241 | INFO     | job.realtimelogging is not enabled
[2025-06-05 05:07:01] 2025-06-05 09:06:55,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:07:01] 2025-06-05 09:06:55,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447924086592)>', '<ExcThread(monitor, started 140447494166272)>']
[2025-06-05 05:07:01] 2025-06-05 09:06:56,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:07:01] 2025-06-05 09:06:56,402 | INFO     | [monitor] control thread has ended
[2025-06-05 05:07:01] 2025-06-05 09:07:00,998 | INFO     | all workflow threads have been joined
[2025-06-05 05:07:01] 2025-06-05 09:07:00,998 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:07:01] 2025-06-05 09:07:00,998 | INFO     | traces error code: 0
[2025-06-05 05:07:01] 2025-06-05 09:07:00,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:07:01] 2025-06-05 09:07:01,097 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:07:01] 2025-06-05 09:07:01,101 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:07:01] 2025-06-05 09:07:01,104 [wrapper] pilotpid: 13719
[2025-06-05 05:07:01] 2025-06-05 09:07:01,108 [wrapper] Pilot exit status: 0
[2025-06-05 05:07:01] 2025-06-05 09:07:01,124 [wrapper] pandaids: 6667667664
[2025-06-05 05:07:01] 2025-06-05 09:07:01,162 [wrapper] cleanup supervisor_pilot 10655 13720
[2025-06-05 05:07:01] 2025-06-05 09:07:01,166 [wrapper] Test setup, not cleaning
[2025-06-05 05:07:01] 2025-06-05 09:07:01,170 [wrapper] apfmon messages muted
[2025-06-05 05:07:01] 2025-06-05 09:07:01,174 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:07:01] 2025-06-05 09:07:01,178 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:07:01]  *** Error codes and diagnostics ***
[2025-06-05 05:07:01]     "exeErrorCode": 0,
[2025-06-05 05:07:01]     "exeErrorDiag": "",
[2025-06-05 05:07:01]     "pilotErrorCode": 0,
[2025-06-05 05:07:01]     "pilotErrorDiag": "",
[2025-06-05 05:07:01]  *** Listing of results directory ***
[2025-06-05 05:07:01] total 408912
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas    495897 May 27 18:42 pilot3.tar.gz
[2025-06-05 05:07:01] -rwx------ 1 boincer umatlas     37140 May 27 18:50 runpilot2-wrapper.sh
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas      5111 May 27 18:50 queuedata.json
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas       100 Jun  5 03:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:07:01] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 03:37 run_atlas
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas       105 Jun  5 03:37 job.xml
[2025-06-05 05:07:01] -rw-r--r-- 2 boincer umatlas 223697488 Jun  5 03:37 EVNT.44871834._002924.pool.root.1
[2025-06-05 05:07:01] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 03:37 start_atlas.sh
[2025-06-05 05:07:01] drwxrwx--x 2 boincer umatlas      4096 Jun  5 03:37 shared
[2025-06-05 05:07:01] -rw-r--r-- 2 boincer umatlas    508876 Jun  5 03:37 input.tar.gz
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas         0 Jun  5 03:37 boinc_lockfile
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 03:37 pandaJob.out
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas    983087 Jun  5 03:37 agis_schedconf.cvmfs.json
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas   1598969 Jun  5 03:37 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:07:01] drwx------ 4 boincer umatlas      4096 Jun  5 03:37 pilot3
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas      5868 Jun  5 05:04 init_data.xml
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas 189457533 Jun  5 05:06 HITS.44871837._074576.pool.root.1
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas       529 Jun  5 05:06 boinc_task_state.xml
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas      1047 Jun  5 05:06 memory_monitor_summary.json
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas    367613 Jun  5 05:06 log.44871837._074576.job.log.tgz.1
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas        95 Jun  5 05:06 pilot_heartbeat.json
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas      7753 Jun  5 05:06 heartbeat.json
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 05:06 boinc_mmap_file
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas        27 Jun  5 05:06 wrapper_checkpoint.txt
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas      4548 Jun  5 05:07 pilotlog.txt
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas    503325 Jun  5 05:07 log.44871837._074576.job.log.1
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas       357 Jun  5 05:07 output.list
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas       620 Jun  5 05:07 runtime_log
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas    890880 Jun  5 05:07 result.tar.gz
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas      8661 Jun  5 05:07 runtime_log.err
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas       659 Jun  5 05:07 C1PKDmXJIe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmNXSKDmxCHKum.diag
[2025-06-05 05:07:01] -rw-r--r-- 1 boincer umatlas     21934 Jun  5 05:07 stderr.txt
[2025-06-05 05:07:01] HITS file was successfully produced:
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas 189457533 Jun  5 05:06 shared/HITS.pool.root.1
[2025-06-05 05:07:01]  *** Contents of shared directory: ***
[2025-06-05 05:07:01] total 404868
[2025-06-05 05:07:01] -rw-r--r-- 2 boincer umatlas 223697488 Jun  5 03:37 ATLAS.root_0
[2025-06-05 05:07:01] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 03:37 start_atlas.sh
[2025-06-05 05:07:01] -rw-r--r-- 2 boincer umatlas    508876 Jun  5 03:37 input.tar.gz
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas 189457533 Jun  5 05:06 HITS.pool.root.1
[2025-06-05 05:07:01] -rw------- 1 boincer umatlas    890880 Jun  5 05:07 result.tar.gz
05:07:02 (10115): run_atlas exited; CPU time 58061.873304
05:07:02 (10115): called boinc_finish(0)

</stderr_txt>
]]>

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