Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:32:03 (2783775): wrapper (7.7.26015): starting
03:32:03 (2783775): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 03:32:03] Arguments: --nthreads 8
[2025-06-05 03:32:03] Threads: 8
[2025-06-05 03:32:03] Checking for CVMFS
[2025-06-05 03:32:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:32:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:32:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:32:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:32:04] 2.12.6.0 861369 33943 528524 146810 2 648 27134125 40960000 18677 16776704 0 159062210 99.662 146656705 26147 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 03:32:04] CVMFS is ok
[2025-06-05 03:32:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 03:32:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 03:32:04] Further information can be found at the LHC@home message board.
[2025-06-05 03:32:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:32:04] Checking for apptainer binary...
[2025-06-05 03:32:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:32:04] Running /usr/bin/apptainer --version
[2025-06-05 03:32:05] apptainer version 1.4.1-1.el9
[2025-06-05 03:32:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:32:05] c7-13-33.aglt2.org
[2025-06-05 03:32:05] apptainer works
[2025-06-05 03:32:05] Set ATHENA_PROC_NUMBER=8
[2025-06-05 03:32:05] Set ATHENA_CORE_NUMBER=8
[2025-06-05 03:32:05] Starting ATLAS job with PandaID=6667883172
[2025-06-05 03:32:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:44:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:44:51] 2025-06-05 09:44:27,279 | INFO     | monitor loop #559: job 0:6667883172 is in state 'finished'
[2025-06-05 05:44:51] 2025-06-05 09:44:27,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:44:51] 2025-06-05 09:44:29,788 | INFO     | monitor loop #560: job 0:6667883172 is in state 'finished'
[2025-06-05 05:44:51] 2025-06-05 09:44:29,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:44:51] 2025-06-05 09:44:29,824 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 05:44:51] 2025-06-05 09:44:29,824 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667883172/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:44:51] 2025-06-05 09:44:29,825 | INFO     | extracted standard info from prmon json
[2025-06-05 05:44:51] 2025-06-05 09:44:29,825 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:44:51] 2025-06-05 09:44:29,825 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:44:51] 2025-06-05 09:44:29,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:44:51] 2025-06-05 09:44:29,826 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:44:51] 2025-06-05 09:44:29,827 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:44:51] 2025-06-05 09:44:29,828 | INFO     | sum of square deviations: 665632126.8062029
[2025-06-05 05:44:51] 2025-06-05 09:44:29,828 | INFO     | sum of deviations: -9534469926.821703
[2025-06-05 05:44:51] 2025-06-05 09:44:29,828 | INFO     | mean x: 1749112689.0387597
[2025-06-05 05:44:51] 2025-06-05 09:44:29,828 | INFO     | mean y: 2240524.3643410853
[2025-06-05 05:44:51] 2025-06-05 09:44:29,828 | INFO     | -- intersect: 25056413333.42066
[2025-06-05 05:44:51] 2025-06-05 09:44:29,828 | INFO     | intersect: 25056413333.42066
[2025-06-05 05:44:51] 2025-06-05 09:44:29,829 | INFO     | chi2: 1.8471338083326416
[2025-06-05 05:44:51] 2025-06-05 09:44:29,829 | INFO     | sum of square deviations: 591195046.7983859
[2025-06-05 05:44:51] 2025-06-05 09:44:29,829 | INFO     | sum of deviations: -7890733692.056451
[2025-06-05 05:44:51] 2025-06-05 09:44:29,830 | INFO     | mean x: 1749112536.5403225
[2025-06-05 05:44:51] 2025-06-05 09:44:29,830 | INFO     | mean y: 2243840.9112903224
[2025-06-05 05:44:51] 2025-06-05 09:44:29,830 | INFO     | -- intersect: 23347806862.828552
[2025-06-05 05:44:51] 2025-06-05 09:44:29,830 | INFO     | intersect: 23347806862.828552
[2025-06-05 05:44:51] 2025-06-05 09:44:29,831 | INFO     | chi2: 1.845767111011596
[2025-06-05 05:44:51] 2025-06-05 09:44:29,831 | INFO     | current chi2=1.845767111011596 (change=0.07399016329408385 %)
[2025-06-05 05:44:51] 2025-06-05 09:44:29,831 | INFO     | right removable region: 123
[2025-06-05 05:44:51] 2025-06-05 09:44:29,831 | INFO     | sum of square deviations: 591191996.7983859
[2025-06-05 05:44:51] 2025-06-05 09:44:29,831 | INFO     | sum of deviations: -27229688364.60484
[2025-06-05 05:44:51] 2025-06-05 09:44:29,831 | INFO     | mean x: 1749112841.5403225
[2025-06-05 05:44:51] 2025-06-05 09:44:29,832 | INFO     | mean y: 2276168.620967742
[2025-06-05 05:44:51] 2025-06-05 09:44:29,832 | INFO     | -- intersect: 80564594074.81877
[2025-06-05 05:44:51] 2025-06-05 09:44:29,832 | INFO     | intersect: 80564594074.81877
[2025-06-05 05:44:51] 2025-06-05 09:44:29,832 | INFO     | chi2: 0.3055308552152386
[2025-06-05 05:44:51] 2025-06-05 09:44:29,832 | INFO     | current chi2=0.3055308552152386 (change=83.4591920825144 %)
[2025-06-05 05:44:51] 2025-06-05 09:44:29,832 | INFO     | sum of square deviations: 522519416.78991646
[2025-06-05 05:44:51] 2025-06-05 09:44:29,832 | INFO     | sum of deviations: -24161527289.15967
[2025-06-05 05:44:51] 2025-06-05 09:44:29,833 | INFO     | mean x: 1749112994.0420167
[2025-06-05 05:44:51] 2025-06-05 09:44:29,833 | INFO     | mean y: 2269323.831932773
[2025-06-05 05:44:51] 2025-06-05 09:44:29,833 | INFO     | -- intersect: 80882022265.83882
[2025-06-05 05:44:51] 2025-06-05 09:44:29,833 | INFO     | intersect: 80882022265.83882
[2025-06-05 05:44:51] 2025-06-05 09:44:29,833 | INFO     | chi2: 0.30445890602685255
[2025-06-05 05:44:51] 2025-06-05 09:44:29,833 | INFO     | current chi2=0.30445890602685255 (change=0.3508480960559237 %)
[2025-06-05 05:44:51] 2025-06-05 09:44:29,833 | INFO     | left removable region: 20
[2025-06-05 05:44:51] 2025-06-05 09:44:29,833 | INFO     | sum of square deviations: 338826455.8446595
[2025-06-05 05:44:51] 2025-06-05 09:44:29,834 | INFO     | sum of deviations: -12361050304.378643
[2025-06-05 05:44:51] 2025-06-05 09:44:29,834 | INFO     | mean x: 1749113116.038835
[2025-06-05 05:44:51] 2025-06-05 09:44:29,834 | INFO     | mean y: 2248752.844660194
[2025-06-05 05:44:51] 2025-06-05 09:44:29,834 | INFO     | -- intersect: 63813308492.869675
[2025-06-05 05:44:51] 2025-06-05 09:44:29,834 | INFO     | intersect: 63813308492.869675
[2025-06-05 05:44:51] 2025-06-05 09:44:29,834 | INFO     | chi2: 0.26261063679466995
[2025-06-05 05:44:51] 2025-06-05 09:44:29,834 | INFO     | -- intersect: 63813308492.869675
[2025-06-05 05:44:51] 2025-06-05 09:44:29,834 | INFO     | current memory leak: -36.48 B/s (using 103 data points, chi2=0.26)
[2025-06-05 05:44:51] 2025-06-05 09:44:29,835 | INFO     | ..............................
[2025-06-05 05:44:51] 2025-06-05 09:44:29,835 | INFO     | . Timing measurements:
[2025-06-05 05:44:51] 2025-06-05 09:44:29,835 | INFO     | . get job = 0 s
[2025-06-05 05:44:51] 2025-06-05 09:44:29,835 | INFO     | . initial setup = 3 s
[2025-06-05 05:44:51] 2025-06-05 09:44:29,835 | INFO     | . payload setup = 14 s
[2025-06-05 05:44:51] 2025-06-05 09:44:29,835 | INFO     | . stage-in = 0 s
[2025-06-05 05:44:51] 2025-06-05 09:44:29,835 | INFO     | . payload execution = 7874 s
[2025-06-05 05:44:51] 2025-06-05 09:44:29,835 | INFO     | . stage-out = 1 s
[2025-06-05 05:44:51] 2025-06-05 09:44:29,835 | INFO     | . log creation = 0 s
[2025-06-05 05:44:51] 2025-06-05 09:44:29,835 | INFO     | ..............................
[2025-06-05 05:44:51] 2025-06-05 09:44:29,907 | INFO     | 
[2025-06-05 05:44:51] 2025-06-05 09:44:29,907 | INFO     | job summary report
[2025-06-05 05:44:51] 2025-06-05 09:44:29,907 | INFO     | --------------------------------------------------
[2025-06-05 05:44:51] 2025-06-05 09:44:29,907 | INFO     | PanDA job id: 6667883172
[2025-06-05 05:44:51] 2025-06-05 09:44:29,907 | INFO     | task id: 44871837
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | errors: (none)
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | pilot state: finished 
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | transexitcode: 0
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | exeerrorcode: 0
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | exeerrordiag: 
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | exitcode: 0
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | exitmsg: OK
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | cpuconsumptiontime: 42233 s
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | nevents: 400
[2025-06-05 05:44:51] 2025-06-05 09:44:29,908 | INFO     | neventsw: 0
[2025-06-05 05:44:51] 2025-06-05 09:44:29,909 | INFO     | pid: 2794636
[2025-06-05 05:44:51] 2025-06-05 09:44:29,909 | INFO     | pgrp: 2794636
[2025-06-05 05:44:51] 2025-06-05 09:44:29,909 | INFO     | corecount: 8
[2025-06-05 05:44:51] 2025-06-05 09:44:29,909 | INFO     | event service: False
[2025-06-05 05:44:51] 2025-06-05 09:44:29,909 | INFO     | sizes: {0: 2397392, 9: 2397598, 11: 2397626, 7892: 2425137, 7893: 2425136, 7895: 2434133, 7896: 2434317, 7909: 2434487}
[2025-06-05 05:44:51] 2025-06-05 09:44:29,909 | INFO     | --------------------------------------------------
[2025-06-05 05:44:51] 2025-06-05 09:44:29,909 | INFO     | 
[2025-06-05 05:44:51] 2025-06-05 09:44:29,909 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 05:44:51] 2025-06-05 09:44:29,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | job 6667883172 has completed (purged errors)
[2025-06-05 05:44:51] 2025-06-05 09:44:29,954 | INFO     | overall cleanup function is called
[2025-06-05 05:44:51] 2025-06-05 09:44:30,966 | INFO     | --- collectZombieJob: --- 10, [2794636]
[2025-06-05 05:44:51] 2025-06-05 09:44:30,966 | INFO     | zombie collector waiting for pid 2794636
[2025-06-05 05:44:51] 2025-06-05 09:44:30,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:44:51] 2025-06-05 09:44:30,966 | INFO     | collected zombie processes
[2025-06-05 05:44:51] 2025-06-05 09:44:30,966 | INFO     | will attempt to kill all subprocesses of pid=2794636
[2025-06-05 05:44:51] 2025-06-05 09:44:31,458 | INFO     | process IDs to be killed: [2794636] (in reverse order)
[2025-06-05 05:44:51] 2025-06-05 09:44:31,587 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:44:51] 2025-06-05 09:44:31,587 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:44:51] 2025-06-05 09:44:31,601 | INFO     | did not find any defunct processes belonging to 2794636
[2025-06-05 05:44:51] 2025-06-05 09:44:31,616 | INFO     | did not find any defunct processes belonging to 2794636
[2025-06-05 05:44:51] 2025-06-05 09:44:31,616 | INFO     | ready for new job
[2025-06-05 05:44:51] 2025-06-05 09:44:31,616 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:44:51] 2025-06-05 09:44:31,618 | INFO     | **************************************
[2025-06-05 05:44:51] 2025-06-05 09:44:31,618 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:44:51] 2025-06-05 09:44:31,618 | INFO     | **************************************
[2025-06-05 05:44:51] 2025-06-05 09:44:31,618 | INFO     | 
[2025-06-05 05:44:51] 2025-06-05 09:44:31,635 | INFO     | architecture information:
[2025-06-05 05:44:51] 2025-06-05 09:44:31,635 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:44:51] 2025-06-05 09:44:31,655 | INFO     | cat /etc/os-release:
[2025-06-05 05:44:51] NAME="CentOS Linux"
[2025-06-05 05:44:51] VERSION="7 (Core)"
[2025-06-05 05:44:51] ID="centos"
[2025-06-05 05:44:51] ID_LIKE="rhel fedora"
[2025-06-05 05:44:51] VERSION_ID="7"
[2025-06-05 05:44:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:44:51] ANSI_COLOR="0;31"
[2025-06-05 05:44:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:44:51] HOME_URL="https://www.centos.org/"
[2025-06-05 05:44:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:44:51] 
[2025-06-05 05:44:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:44:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:44:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:44:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:44:51] 
[2025-06-05 05:44:51] 2025-06-05 09:44:31,655 | INFO     | **************************************
[2025-06-05 05:44:51] 2025-06-05 09:44:32,174 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 05:44:51] 2025-06-05 09:44:32,215 | INFO     | sufficient remaining disk space (86008397824 B)
[2025-06-05 05:44:51] 2025-06-05 09:44:32,215 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:44:51] 2025-06-05 09:44:32,215 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:44:51] 2025-06-05 09:44:32,215 | INFO     | update_server=False
[2025-06-05 05:44:51] 2025-06-05 09:44:32,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:44:51] 2025-06-05 09:44:32,216 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:44:51] 2025-06-05 09:44:32,216 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:44:51] 2025-06-05 09:44:32,216 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:44:51] 2025-06-05 09:44:32,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:44:51] 2025-06-05 09:44:32,293 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 05:44:51] 2025-06-05 09:44:32,293 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 05:44:51] 2025-06-05 09:44:32,293 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:44:51] 2025-06-05 09:44:32,293 | INFO     | will abort loop
[2025-06-05 05:44:51] 2025-06-05 09:44:32,463 | INFO     | all data control threads have been joined
[2025-06-05 05:44:51] 2025-06-05 09:44:32,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:44:51] 2025-06-05 09:44:32,713 | INFO     | all payload control threads have been joined
[2025-06-05 05:44:51] 2025-06-05 09:44:33,221 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:33,299 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:33,413 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:33,471 | INFO     | [data] control thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:33,498 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:33,659 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:33,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:44:51] 2025-06-05 09:44:33,719 | INFO     | [payload] control thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:33,830 | INFO     | all job control threads have been joined
[2025-06-05 05:44:51] 2025-06-05 09:44:33,903 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:34,177 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:34,570 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:34,656 | INFO     | [job] validate thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:34,836 | INFO     | [job] control thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:34,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:44:51] 2025-06-05 09:44:35,710 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:35,940 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:36,562 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:42,839 | INFO     | job.realtimelogging is not enabled
[2025-06-05 05:44:51] 2025-06-05 09:44:43,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:44:51] 2025-06-05 09:44:45,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139844105762624)>', '<ExcThread(monitor, started 139843388565248)>']
[2025-06-05 05:44:51] 2025-06-05 09:44:45,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:44:51] 2025-06-05 09:44:45,298 | INFO     | [monitor] control thread has ended
[2025-06-05 05:44:51] 2025-06-05 09:44:50,262 | INFO     | all workflow threads have been joined
[2025-06-05 05:44:51] 2025-06-05 09:44:50,262 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:44:51] 2025-06-05 09:44:50,263 | INFO     | traces error code: 0
[2025-06-05 05:44:51] 2025-06-05 09:44:50,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:44:51] 2025-06-05 09:44:50,459 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:44:51] 2025-06-05 09:44:50,484 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:44:51] 2025-06-05 09:44:50,516 [wrapper] pilotpid: 2788214
[2025-06-05 05:44:51] 2025-06-05 09:44:50,558 [wrapper] Pilot exit status: 0
[2025-06-05 05:44:51] 2025-06-05 09:44:50,698 [wrapper] pandaids: 6667883172
[2025-06-05 05:44:51] 2025-06-05 09:44:51,034 [wrapper] cleanup supervisor_pilot 3658801 2788215
[2025-06-05 05:44:51] 2025-06-05 09:44:51,038 [wrapper] Test setup, not cleaning
[2025-06-05 05:44:51] 2025-06-05 09:44:51,042 [wrapper] apfmon messages muted
[2025-06-05 05:44:51] 2025-06-05 09:44:51,072 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:44:51] 2025-06-05 09:44:51,086 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:44:51]  *** Error codes and diagnostics ***
[2025-06-05 05:44:51]     "exeErrorCode": 0,
[2025-06-05 05:44:51]     "exeErrorDiag": "",
[2025-06-05 05:44:51]     "pilotErrorCode": 0,
[2025-06-05 05:44:51]     "pilotErrorDiag": "",
[2025-06-05 05:44:51]  *** Listing of results directory ***
[2025-06-05 05:44:51] total 422724
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas    495897 May 27 20:38 pilot3.tar.gz
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas      5111 May 27 21:11 queuedata.json
[2025-06-05 05:44:51] -rwx------. 1 boincer umatlas     37140 May 27 21:14 runpilot2-wrapper.sh
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas       100 Jun  5 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:44:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 03:32 run_atlas
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas       105 Jun  5 03:32 job.xml
[2025-06-05 05:44:51] -rw-r--r--. 2 boincer umatlas 227919074 Jun  5 03:32 EVNT.44871834._002991.pool.root.1
[2025-06-05 05:44:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 03:32 start_atlas.sh
[2025-06-05 05:44:51] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 03:32 shared
[2025-06-05 05:44:51] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 03:32 input.tar.gz
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas         0 Jun  5 03:32 boinc_lockfile
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 03:32 pandaJob.out
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas    983087 Jun  5 03:32 agis_schedconf.cvmfs.json
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas   1598969 Jun  5 03:32 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:44:51] drwx------. 4 boincer umatlas      4096 Jun  5 03:32 pilot3
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas      6896 Jun  5 05:37 init_data.xml
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas       529 Jun  5 05:43 boinc_task_state.xml
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas 198965567 Jun  5 05:43 HITS.44871837._076477.pool.root.1
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas        95 Jun  5 05:43 pilot_heartbeat.json
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas      1029 Jun  5 05:44 memory_monitor_summary.json
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas    347080 Jun  5 05:44 log.44871837._076477.job.log.tgz.1
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas      7690 Jun  5 05:44 heartbeat.json
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 05:44 boinc_mmap_file
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas        27 Jun  5 05:44 wrapper_checkpoint.txt
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas      4734 Jun  5 05:44 pilotlog.txt
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas    731560 Jun  5 05:44 log.44871837._076477.job.log.1
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas       357 Jun  5 05:44 output.list
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas       620 Jun  5 05:44 runtime_log
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas   1095680 Jun  5 05:44 result.tar.gz
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas      8659 Jun  5 05:44 runtime_log.err
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas       653 Jun  5 05:44 jEHKDmUYKe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrhSKDmXtmVkm.diag
[2025-06-05 05:44:51] -rw-r--r--. 1 boincer umatlas     21127 Jun  5 05:44 stderr.txt
[2025-06-05 05:44:51] HITS file was successfully produced:
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas 198965567 Jun  5 05:43 shared/HITS.pool.root.1
[2025-06-05 05:44:51]  *** Contents of shared directory: ***
[2025-06-05 05:44:51] total 418476
[2025-06-05 05:44:51] -rw-r--r--. 2 boincer umatlas 227919074 Jun  5 03:32 ATLAS.root_0
[2025-06-05 05:44:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 03:32 start_atlas.sh
[2025-06-05 05:44:51] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 03:32 input.tar.gz
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas 198965567 Jun  5 05:43 HITS.pool.root.1
[2025-06-05 05:44:51] -rw-------. 1 boincer umatlas   1095680 Jun  5 05:44 result.tar.gz
05:44:53 (2783775): run_atlas exited; CPU time 42280.880488
05:44:53 (2783775): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN