Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:50:39 (230025): wrapper (7.7.26015): starting
02:50:39 (230025): wrapper: running run_atlas (--nthreads 9)
[2025-06-05 02:50:39] Arguments: --nthreads 9
[2025-06-05 02:50:39] Threads: 9
[2025-06-05 02:50:39] Checking for CVMFS
[2025-06-05 02:50:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:50:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:50:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:50:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:50:40] 2.11.2.0 6627 29885 255756 146809 3 159 15046548 18432000 11397 130560 0 76751308 99.467 80906523 32027 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 02:50:40] CVMFS is ok
[2025-06-05 02:50:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:50:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:50:40] Further information can be found at the LHC@home message board.
[2025-06-05 02:50:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:50:40] Checking for apptainer binary...
[2025-06-05 02:50:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:50:40] Running /usr/bin/apptainer --version
[2025-06-05 02:50:41] apptainer version 1.3.2-1.el7
[2025-06-05 02:50:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:50:50] c-210-35-1.aglt2.org
[2025-06-05 02:50:50] apptainer works
[2025-06-05 02:50:50] Set ATHENA_PROC_NUMBER=9
[2025-06-05 02:50:50] Set ATHENA_CORE_NUMBER=9
[2025-06-05 02:50:51] Starting ATLAS job with PandaID=6667882902
[2025-06-05 02:50:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:09:25]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:09:25] 2025-06-05 11:09:09,852 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 07:09:25] 2025-06-05 11:09:09,852 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667882902/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 07:09:25] 2025-06-05 11:09:09,853 | INFO     | extracted standard info from prmon json
[2025-06-05 07:09:25] 2025-06-05 11:09:09,853 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:09:25] 2025-06-05 11:09:09,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:09:25] 2025-06-05 11:09:09,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:09:25] 2025-06-05 11:09:09,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:09:25] 2025-06-05 11:09:09,858 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:09:25] 2025-06-05 11:09:09,858 | INFO     | sum of square deviations: 4787032791.638566
[2025-06-05 07:09:25] 2025-06-05 11:09:09,859 | INFO     | sum of deviations: 6591493883.915659
[2025-06-05 07:09:25] 2025-06-05 11:09:09,860 | INFO     | mean x: 1749114115.3975904
[2025-06-05 07:09:25] 2025-06-05 11:09:09,860 | INFO     | mean y: 2531214.5261044176
[2025-06-05 07:09:25] 2025-06-05 11:09:09,860 | INFO     | -- intersect: -2405907477.1936946
[2025-06-05 07:09:25] 2025-06-05 11:09:09,860 | INFO     | intersect: -2405907477.1936946
[2025-06-05 07:09:25] 2025-06-05 11:09:09,860 | INFO     | chi2: 2.322649624834726
[2025-06-05 07:09:25] 2025-06-05 11:09:09,861 | INFO     | sum of square deviations: 4504434430.831966
[2025-06-05 07:09:25] 2025-06-05 11:09:09,862 | INFO     | sum of deviations: 23124911970.385246
[2025-06-05 07:09:25] 2025-06-05 11:09:09,862 | INFO     | mean x: 1749113962.9057376
[2025-06-05 07:09:25] 2025-06-05 11:09:09,862 | INFO     | mean y: 2539987.581967213
[2025-06-05 07:09:25] 2025-06-05 11:09:09,862 | INFO     | -- intersect: -8977079327.444033
[2025-06-05 07:09:25] 2025-06-05 11:09:09,862 | INFO     | intersect: -8977079327.444033
[2025-06-05 07:09:25] 2025-06-05 11:09:09,863 | INFO     | chi2: 1.5433472600706077
[2025-06-05 07:09:25] 2025-06-05 11:09:09,863 | INFO     | current chi2=1.5433472600706077 (change=33.552299771411775 %)
[2025-06-05 07:09:25] 2025-06-05 11:09:09,863 | INFO     | sum of square deviations: 4233170357.8158846
[2025-06-05 07:09:25] 2025-06-05 11:09:09,864 | INFO     | sum of deviations: 22467343583.301254
[2025-06-05 07:09:25] 2025-06-05 11:09:09,864 | INFO     | mean x: 1749113810.4100418
[2025-06-05 07:09:25] 2025-06-05 11:09:09,864 | INFO     | mean y: 2539617.8744769874
[2025-06-05 07:09:25] 2025-06-05 11:09:09,864 | INFO     | -- intersect: -9280795949.337502
[2025-06-05 07:09:25] 2025-06-05 11:09:09,865 | INFO     | intersect: -9280795949.337502
[2025-06-05 07:09:25] 2025-06-05 11:09:09,865 | INFO     | chi2: 1.5440238925588163
[2025-06-05 07:09:25] 2025-06-05 11:09:09,865 | INFO     | current chi2=1.5440238925588163 (change=-0.043841882233143 %)
[2025-06-05 07:09:25] 2025-06-05 11:09:09,865 | INFO     | right removable region: 238
[2025-06-05 07:09:25] 2025-06-05 11:09:09,865 | INFO     | sum of square deviations: 4504374040.831966
[2025-06-05 07:09:25] 2025-06-05 11:09:09,867 | INFO     | sum of deviations: -31241207432.610657
[2025-06-05 07:09:25] 2025-06-05 11:09:09,867 | INFO     | mean x: 1749114267.9057376
[2025-06-05 07:09:25] 2025-06-05 11:09:09,867 | INFO     | mean y: 2551434.3647540985
[2025-06-05 07:09:25] 2025-06-05 11:09:09,867 | INFO     | -- intersect: 12133968845.892405
[2025-06-05 07:09:25] 2025-06-05 11:09:09,867 | INFO     | intersect: 12133968845.892405
[2025-06-05 07:09:25] 2025-06-05 11:09:09,867 | INFO     | chi2: 0.9047336379461204
[2025-06-05 07:09:25] 2025-06-05 11:09:09,867 | INFO     | current chi2=0.9047336379461204 (change=61.0473474659141 %)
[2025-06-05 07:09:25] 2025-06-05 11:09:09,868 | INFO     | sum of square deviations: 4233064339.991621
[2025-06-05 07:09:25] 2025-06-05 11:09:09,869 | INFO     | sum of deviations: -25983328609.33474
[2025-06-05 07:09:25] 2025-06-05 11:09:09,869 | INFO     | mean x: 1749114420.414226
[2025-06-05 07:09:25] 2025-06-05 11:09:09,869 | INFO     | mean y: 2548452.5690376568
[2025-06-05 07:09:25] 2025-06-05 11:09:09,869 | INFO     | -- intersect: 10738934935.425776
[2025-06-05 07:09:25] 2025-06-05 11:09:09,869 | INFO     | intersect: 10738934935.425776
[2025-06-05 07:09:25] 2025-06-05 11:09:09,869 | INFO     | chi2: 0.8819404836389346
[2025-06-05 07:09:25] 2025-06-05 11:09:09,870 | INFO     | current chi2=0.8819404836389346 (change=2.519322080135055 %)
[2025-06-05 07:09:25] 2025-06-05 11:09:09,870 | INFO     | left removable region: 20
[2025-06-05 07:09:25] 2025-06-05 11:09:09,870 | INFO     | sum of square deviations: 3212367104.224764
[2025-06-05 07:09:25] 2025-06-05 11:09:09,871 | INFO     | sum of deviations: 5577673612.587159
[2025-06-05 07:09:25] 2025-06-05 11:09:09,871 | INFO     | mean x: 1749114389.940367
[2025-06-05 07:09:25] 2025-06-05 11:09:09,871 | INFO     | mean y: 2548117.660550459
[2025-06-05 07:09:25] 2025-06-05 11:09:09,871 | INFO     | -- intersect: -3034461309.230985
[2025-06-05 07:09:25] 2025-06-05 11:09:09,871 | INFO     | intersect: -3034461309.230985
[2025-06-05 07:09:25] 2025-06-05 11:09:09,872 | INFO     | chi2: 0.00044878529158378267
[2025-06-05 07:09:25] 2025-06-05 11:09:09,872 | INFO     | -- intersect: -3034461309.230985
[2025-06-05 07:09:25] 2025-06-05 11:09:09,872 | INFO     | current memory leak: 1.74 B/s (using 218 data points, chi2=0.00)
[2025-06-05 07:09:25] 2025-06-05 11:09:09,872 | INFO     | ..............................
[2025-06-05 07:09:25] 2025-06-05 11:09:09,872 | INFO     | . Timing measurements:
[2025-06-05 07:09:25] 2025-06-05 11:09:09,873 | INFO     | . get job = 0 s
[2025-06-05 07:09:25] 2025-06-05 11:09:09,873 | INFO     | . initial setup = 3 s
[2025-06-05 07:09:25] 2025-06-05 11:09:09,873 | INFO     | . payload setup = 72 s
[2025-06-05 07:09:25] 2025-06-05 11:09:09,873 | INFO     | . stage-in = 0 s
[2025-06-05 07:09:25] 2025-06-05 11:09:09,873 | INFO     | . payload execution = 15237 s
[2025-06-05 07:09:25] 2025-06-05 11:09:09,873 | INFO     | . stage-out = 4 s
[2025-06-05 07:09:25] 2025-06-05 11:09:09,873 | INFO     | . log creation = 1 s
[2025-06-05 07:09:25] 2025-06-05 11:09:09,873 | INFO     | ..............................
[2025-06-05 07:09:25] 2025-06-05 11:09:09,958 | INFO     | 
[2025-06-05 07:09:25] 2025-06-05 11:09:09,958 | INFO     | job summary report
[2025-06-05 07:09:25] 2025-06-05 11:09:09,958 | INFO     | --------------------------------------------------
[2025-06-05 07:09:25] 2025-06-05 11:09:09,958 | INFO     | PanDA job id: 6667882902
[2025-06-05 07:09:25] 2025-06-05 11:09:09,958 | INFO     | task id: 44871837
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | errors: (none)
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | pilot state: finished 
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | transexitcode: 0
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | exeerrorcode: 0
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | exeerrordiag: 
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | exitcode: 0
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | exitmsg: OK
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | cpuconsumptiontime: 57438 s
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | nevents: 400
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | neventsw: 0
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | pid: 242952
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | pgrp: 242952
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | corecount: 9
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | event service: False
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397370, 23: 2397632, 34: 2397632, 15314: 2428522, 15318: 2437463, 15321: 2437519, 15344: 2437689}
[2025-06-05 07:09:25] 2025-06-05 11:09:09,959 | INFO     | --------------------------------------------------
[2025-06-05 07:09:25] 2025-06-05 11:09:09,960 | INFO     | 
[2025-06-05 07:09:25] 2025-06-05 11:09:09,960 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 07:09:25] 2025-06-05 11:09:10,048 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,048 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | job 6667882902 has completed (purged errors)
[2025-06-05 07:09:25] 2025-06-05 11:09:10,049 | INFO     | overall cleanup function is called
[2025-06-05 07:09:25] 2025-06-05 11:09:11,056 | INFO     | --- collectZombieJob: --- 10, [242952]
[2025-06-05 07:09:25] 2025-06-05 11:09:11,056 | INFO     | zombie collector waiting for pid 242952
[2025-06-05 07:09:25] 2025-06-05 11:09:11,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:09:25] 2025-06-05 11:09:11,057 | INFO     | collected zombie processes
[2025-06-05 07:09:25] 2025-06-05 11:09:11,057 | INFO     | will attempt to kill all subprocesses of pid=242952
[2025-06-05 07:09:25] 2025-06-05 11:09:11,386 | INFO     | process IDs to be killed: [242952] (in reverse order)
[2025-06-05 07:09:25] 2025-06-05 11:09:11,794 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:09:25] 2025-06-05 11:09:11,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:09:25] 2025-06-05 11:09:11,809 | INFO     | did not find any defunct processes belonging to 242952
[2025-06-05 07:09:25] 2025-06-05 11:09:11,815 | INFO     | did not find any defunct processes belonging to 242952
[2025-06-05 07:09:25] 2025-06-05 11:09:11,816 | INFO     | ready for new job
[2025-06-05 07:09:25] 2025-06-05 11:09:11,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:09:25] 2025-06-05 11:09:11,818 | INFO     | **************************************
[2025-06-05 07:09:25] 2025-06-05 11:09:11,818 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:09:25] 2025-06-05 11:09:11,818 | INFO     | **************************************
[2025-06-05 07:09:25] 2025-06-05 11:09:11,818 | INFO     | 
[2025-06-05 07:09:25] 2025-06-05 11:09:11,821 | INFO     | architecture information:
[2025-06-05 07:09:25] 2025-06-05 11:09:11,822 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:09:25] 2025-06-05 11:09:12,008 | INFO     | cat /etc/os-release:
[2025-06-05 07:09:25] NAME="CentOS Linux"
[2025-06-05 07:09:25] VERSION="7 (Core)"
[2025-06-05 07:09:25] ID="centos"
[2025-06-05 07:09:25] ID_LIKE="rhel fedora"
[2025-06-05 07:09:25] VERSION_ID="7"
[2025-06-05 07:09:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:09:25] ANSI_COLOR="0;31"
[2025-06-05 07:09:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:09:25] HOME_URL="https://www.centos.org/"
[2025-06-05 07:09:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:09:25] 
[2025-06-05 07:09:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:09:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:09:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:09:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:09:25] 
[2025-06-05 07:09:25] 2025-06-05 11:09:12,008 | INFO     | **************************************
[2025-06-05 07:09:25] 2025-06-05 11:09:12,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 07:09:25] 2025-06-05 11:09:12,599 | INFO     | sufficient remaining disk space (57582551040 B)
[2025-06-05 07:09:25] 2025-06-05 11:09:12,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:09:25] 2025-06-05 11:09:12,599 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:09:25] 2025-06-05 11:09:12,599 | INFO     | update_server=False
[2025-06-05 07:09:25] 2025-06-05 11:09:12,599 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:09:25] 2025-06-05 11:09:12,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:09:25] 2025-06-05 11:09:12,600 | INFO     | aborting loop
[2025-06-05 07:09:25] 2025-06-05 11:09:12,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:09:25] 2025-06-05 11:09:13,021 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:09:25] 2025-06-05 11:09:13,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:09:25] 2025-06-05 11:09:13,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:09:25] 2025-06-05 11:09:13,163 | INFO     | all job control threads have been joined
[2025-06-05 07:09:25] 2025-06-05 11:09:13,268 | INFO     | all data control threads have been joined
[2025-06-05 07:09:25] 2025-06-05 11:09:13,605 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:13,607 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:13,613 | INFO     | all payload control threads have been joined
[2025-06-05 07:09:25] 2025-06-05 11:09:14,118 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,169 | INFO     | [job] control thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,274 | INFO     | [data] control thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,369 | INFO     | [job] validate thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,556 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,607 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,619 | INFO     | [payload] control thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,627 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,810 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,853 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,901 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,929 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:14,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:09:25] 2025-06-05 11:09:15,187 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:09:25] 2025-06-05 11:09:15,978 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:19,198 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:09:25] 2025-06-05 11:09:19,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374892693312)>', '<ExcThread(monitor, started 140374580369152)>']
[2025-06-05 07:09:25] 2025-06-05 11:09:20,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:09:25] 2025-06-05 11:09:20,068 | INFO     | [monitor] control thread has ended
[2025-06-05 07:09:25] 2025-06-05 11:09:24,326 | INFO     | all workflow threads have been joined
[2025-06-05 07:09:25] 2025-06-05 11:09:24,330 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:09:25] 2025-06-05 11:09:24,334 | INFO     | traces error code: 0
[2025-06-05 07:09:25] 2025-06-05 11:09:24,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:09:25] 2025-06-05 11:09:24,604 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:09:25] 2025-06-05 11:09:24,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:09:25] 2025-06-05 11:09:24,709 [wrapper] pilotpid: 235617
[2025-06-05 07:09:25] 2025-06-05 11:09:24,761 [wrapper] Pilot exit status: 0
[2025-06-05 07:09:25] 2025-06-05 11:09:24,923 [wrapper] pandaids: 6667882902
[2025-06-05 07:09:25] 2025-06-05 11:09:25,038 [wrapper] cleanup supervisor_pilot  31135 235618
[2025-06-05 07:09:25] 2025-06-05 11:09:25,051 [wrapper] Test setup, not cleaning
[2025-06-05 07:09:25] 2025-06-05 11:09:25,061 [wrapper] apfmon messages muted
[2025-06-05 07:09:25] 2025-06-05 11:09:25,064 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:09:25] 2025-06-05 11:09:25,069 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:09:25]  *** Error codes and diagnostics ***
[2025-06-05 07:09:25]     "exeErrorCode": 0,
[2025-06-05 07:09:25]     "exeErrorDiag": "",
[2025-06-05 07:09:25]     "pilotErrorCode": 0,
[2025-06-05 07:09:25]     "pilotErrorDiag": "",
[2025-06-05 07:09:25]  *** Listing of results directory ***
[2025-06-05 07:09:25] total 421464
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas    495897 May 27 20:38 pilot3.tar.gz
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas      5111 May 27 21:02 queuedata.json
[2025-06-05 07:09:25] -rwx------ 1 boincer umatlas     37140 May 27 21:02 runpilot2-wrapper.sh
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas       100 Jun  5 02:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:09:25] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 02:50 run_atlas
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas       105 Jun  5 02:50 job.xml
[2025-06-05 07:09:25] -rw-r--r-- 2 boincer umatlas 222171915 Jun  5 02:50 EVNT.44871834._001333.pool.root.1
[2025-06-05 07:09:25] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 02:50 start_atlas.sh
[2025-06-05 07:09:25] drwxrwx--x 2 boincer umatlas      4096 Jun  5 02:50 shared
[2025-06-05 07:09:25] -rw-r--r-- 2 boincer umatlas    508887 Jun  5 02:50 input.tar.gz
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas         0 Jun  5 02:50 boinc_lockfile
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 02:50 pandaJob.out
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas    986926 Jun  5 02:52 agis_schedconf.cvmfs.json
[2025-06-05 07:09:25] drwx------ 4 boincer umatlas      4096 Jun  5 02:52 pilot3
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas      6354 Jun  5 07:00 init_data.xml
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas 202127967 Jun  5 07:07 HITS.44871837._076207.pool.root.1
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas       530 Jun  5 07:07 boinc_task_state.xml
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas      1060 Jun  5 07:08 memory_monitor_summary.json
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas   1598969 Jun  5 07:08 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas    433908 Jun  5 07:08 log.44871837._076207.job.log.tgz.1
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas        95 Jun  5 07:08 pilot_heartbeat.json
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas      7756 Jun  5 07:09 heartbeat.json
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 07:09 boinc_mmap_file
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas        28 Jun  5 07:09 wrapper_checkpoint.txt
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas      4353 Jun  5 07:09 pilotlog.txt
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas   1291016 Jun  5 07:09 log.44871837._076207.job.log.1
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas       357 Jun  5 07:09 output.list
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas       620 Jun  5 07:09 runtime_log
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas   1740800 Jun  5 07:09 result.tar.gz
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas       664 Jun  5 07:09 x7GKDmSMKe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmufSKDmDRIgcm.diag
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas      8670 Jun  5 07:09 runtime_log.err
[2025-06-05 07:09:25] -rw-r--r-- 1 boincer umatlas     20905 Jun  5 07:09 stderr.txt
[2025-06-05 07:09:25] HITS file was successfully produced:
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas 202127967 Jun  5 07:07 shared/HITS.pool.root.1
[2025-06-05 07:09:25]  *** Contents of shared directory: ***
[2025-06-05 07:09:25] total 416584
[2025-06-05 07:09:25] -rw-r--r-- 2 boincer umatlas 222171915 Jun  5 02:50 ATLAS.root_0
[2025-06-05 07:09:25] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 02:50 start_atlas.sh
[2025-06-05 07:09:25] -rw-r--r-- 2 boincer umatlas    508887 Jun  5 02:50 input.tar.gz
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas 202127967 Jun  5 07:07 HITS.pool.root.1
[2025-06-05 07:09:25] -rw------- 1 boincer umatlas   1740800 Jun  5 07:09 result.tar.gz
07:09:26 (230025): run_atlas exited; CPU time 57669.294827
07:09:26 (230025): called boinc_finish(0)

</stderr_txt>
]]>

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