Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:38:04 (4113065): wrapper (7.7.26015): starting
02:38:04 (4113065): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 02:38:04] Arguments: --nthreads 12
[2025-06-05 02:38:04] Threads: 12
[2025-06-05 02:38:04] Checking for CVMFS
[2025-06-05 02:38:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:38:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:38:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:38:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:38:05] 2.12.6.0 504633 24351 414324 146809 0 220 20444932 32935937 14014 16776704 0 103148877 99.635 102414814 32123 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 02:38:05] CVMFS is ok
[2025-06-05 02:38:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:38:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:38:05] Further information can be found at the LHC@home message board.
[2025-06-05 02:38:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:38:05] Checking for apptainer binary...
[2025-06-05 02:38:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:38:05] Running /usr/bin/apptainer --version
[2025-06-05 02:38:05] apptainer version 1.4.1-1.el9
[2025-06-05 02:38:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:38:05] c6-5-37-2.aglt2.org
[2025-06-05 02:38:05] apptainer works
[2025-06-05 02:38:05] Set ATHENA_PROC_NUMBER=12
[2025-06-05 02:38:05] Set ATHENA_CORE_NUMBER=12
[2025-06-05 02:38:06] Starting ATLAS job with PandaID=6667732240
[2025-06-05 02:38:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:23:05]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:23:05] 2025-06-05 09:22:49,551 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 05:23:05] 2025-06-05 09:22:49,739 | WARNING  | process 4127266 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 05:23:05] 2025-06-05 09:22:49,740 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667732240/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:23:05] 2025-06-05 09:22:49,741 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667732240/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:23:05] 2025-06-05 09:22:50,024 | INFO     | number of running child processes to parent process 4127266: 1
[2025-06-05 05:23:05] 2025-06-05 09:22:50,024 | INFO     | maximum number of monitored processes: 6
[2025-06-05 05:23:05] 2025-06-05 09:22:52,526 | INFO     | monitor loop #657: job 0:6667732240 is in state 'finished'
[2025-06-05 05:23:05] 2025-06-05 09:22:52,526 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 05:23:05] 2025-06-05 09:22:53,159 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 05:23:05] 2025-06-05 09:22:53,159 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667732240/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 05:23:05] 2025-06-05 09:22:53,160 | INFO     | extracted standard info from prmon json
[2025-06-05 05:23:05] 2025-06-05 09:22:53,160 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:23:05] 2025-06-05 09:22:53,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:23:05] 2025-06-05 09:22:53,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:23:05] 2025-06-05 09:22:53,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:23:05] 2025-06-05 09:22:53,165 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:23:05] 2025-06-05 09:22:53,165 | INFO     | sum of square deviations: 1294045852.2360194
[2025-06-05 05:23:05] 2025-06-05 09:22:53,166 | INFO     | sum of deviations: -18473346427.590065
[2025-06-05 05:23:05] 2025-06-05 09:22:53,166 | INFO     | mean x: 1749110473.204969
[2025-06-05 05:23:05] 2025-06-05 09:22:53,167 | INFO     | mean y: 2374434.9875776395
[2025-06-05 05:23:05] 2025-06-05 09:22:53,167 | INFO     | -- intersect: 24972064385.161037
[2025-06-05 05:23:05] 2025-06-05 09:22:53,167 | INFO     | intersect: 24972064385.161037
[2025-06-05 05:23:05] 2025-06-05 09:22:53,167 | INFO     | chi2: 2.764702144012232
[2025-06-05 05:23:05] 2025-06-05 09:22:53,168 | INFO     | sum of square deviations: 1177197912.0192287
[2025-06-05 05:23:05] 2025-06-05 09:22:53,169 | INFO     | sum of deviations: -8049125668.519222
[2025-06-05 05:23:05] 2025-06-05 09:22:53,169 | INFO     | mean x: 1749110320.7115386
[2025-06-05 05:23:05] 2025-06-05 09:22:53,169 | INFO     | mean y: 2387737.7884615385
[2025-06-05 05:23:05] 2025-06-05 09:22:53,169 | INFO     | -- intersect: 11961981477.945526
[2025-06-05 05:23:05] 2025-06-05 09:22:53,169 | INFO     | intersect: 11961981477.945526
[2025-06-05 05:23:05] 2025-06-05 09:22:53,169 | INFO     | chi2: 2.1053986525306296
[2025-06-05 05:23:05] 2025-06-05 09:22:53,169 | INFO     | current chi2=2.1053986525306296 (change=23.847179809568864 %)
[2025-06-05 05:23:05] 2025-06-05 09:22:53,170 | INFO     | right removable region: 155
[2025-06-05 05:23:05] 2025-06-05 09:22:53,170 | INFO     | sum of square deviations: 1177177782.0192287
[2025-06-05 05:23:05] 2025-06-05 09:22:53,171 | INFO     | sum of deviations: -45345931259.019226
[2025-06-05 05:23:05] 2025-06-05 09:22:53,171 | INFO     | mean x: 1749110625.7115386
[2025-06-05 05:23:05] 2025-06-05 09:22:53,171 | INFO     | mean y: 2409125.621794872
[2025-06-05 05:23:05] 2025-06-05 09:22:53,171 | INFO     | -- intersect: 67379700312.58709
[2025-06-05 05:23:05] 2025-06-05 09:22:53,171 | INFO     | intersect: 67379700312.58709
[2025-06-05 05:23:05] 2025-06-05 09:22:53,172 | INFO     | chi2: 1.070311381901227
[2025-06-05 05:23:05] 2025-06-05 09:22:53,172 | INFO     | current chi2=1.070311381901227 (change=61.28655724381383 %)
[2025-06-05 05:23:05] 2025-06-05 09:22:53,172 | INFO     | sum of square deviations: 1067565661.7880816
[2025-06-05 05:23:05] 2025-06-05 09:22:53,173 | INFO     | sum of deviations: -48425711319.37748
[2025-06-05 05:23:05] 2025-06-05 09:22:53,174 | INFO     | mean x: 1749110778.218543
[2025-06-05 05:23:05] 2025-06-05 09:22:53,174 | INFO     | mean y: 2413323.9205298014
[2025-06-05 05:23:05] 2025-06-05 09:22:53,174 | INFO     | -- intersect: 79343606698.15695
[2025-06-05 05:23:05] 2025-06-05 09:22:53,174 | INFO     | intersect: 79343606698.15695
[2025-06-05 05:23:05] 2025-06-05 09:22:53,174 | INFO     | chi2: 0.9774946246697764
[2025-06-05 05:23:05] 2025-06-05 09:22:53,175 | INFO     | current chi2=0.9774946246697764 (change=8.671939661762487 %)
[2025-06-05 05:23:05] 2025-06-05 09:22:53,175 | INFO     | left removable region: 20
[2025-06-05 05:23:05] 2025-06-05 09:22:53,175 | INFO     | sum of square deviations: 762891522.414814
[2025-06-05 05:23:05] 2025-06-05 09:22:53,176 | INFO     | sum of deviations: -25991933605.251846
[2025-06-05 05:23:05] 2025-06-05 09:22:53,176 | INFO     | mean x: 1749110900.237037
[2025-06-05 05:23:05] 2025-06-05 09:22:53,176 | INFO     | mean y: 2410493.5703703705
[2025-06-05 05:23:05] 2025-06-05 09:22:53,176 | INFO     | -- intersect: 59595121975.37848
[2025-06-05 05:23:05] 2025-06-05 09:22:53,176 | INFO     | intersect: 59595121975.37848
[2025-06-05 05:23:05] 2025-06-05 09:22:53,177 | INFO     | chi2: 0.2576383829628734
[2025-06-05 05:23:05] 2025-06-05 09:22:53,177 | INFO     | -- intersect: 59595121975.37848
[2025-06-05 05:23:05] 2025-06-05 09:22:53,177 | INFO     | current memory leak: -34.07 B/s (using 135 data points, chi2=0.26)
[2025-06-05 05:23:05] 2025-06-05 09:22:53,178 | INFO     | ..............................
[2025-06-05 05:23:05] 2025-06-05 09:22:53,178 | INFO     | . Timing measurements:
[2025-06-05 05:23:05] 2025-06-05 09:22:53,178 | INFO     | . get job = 0 s
[2025-06-05 05:23:05] 2025-06-05 09:22:53,178 | INFO     | . initial setup = 2 s
[2025-06-05 05:23:05] 2025-06-05 09:22:53,178 | INFO     | . payload setup = 24 s
[2025-06-05 05:23:05] 2025-06-05 09:22:53,178 | INFO     | . stage-in = 0 s
[2025-06-05 05:23:05] 2025-06-05 09:22:53,178 | INFO     | . payload execution = 9791 s
[2025-06-05 05:23:05] 2025-06-05 09:22:53,178 | INFO     | . stage-out = 0 s
[2025-06-05 05:23:05] 2025-06-05 09:22:53,179 | INFO     | . log creation = 0 s
[2025-06-05 05:23:05] 2025-06-05 09:22:53,179 | INFO     | ..............................
[2025-06-05 05:23:05] 2025-06-05 09:22:53,741 | INFO     | 
[2025-06-05 05:23:05] 2025-06-05 09:22:53,742 | INFO     | job summary report
[2025-06-05 05:23:05] 2025-06-05 09:22:53,742 | INFO     | --------------------------------------------------
[2025-06-05 05:23:05] 2025-06-05 09:22:53,742 | INFO     | PanDA job id: 6667732240
[2025-06-05 05:23:05] 2025-06-05 09:22:53,742 | INFO     | task id: 44871837
[2025-06-05 05:23:05] 2025-06-05 09:22:53,742 | INFO     | errors: (none)
[2025-06-05 05:23:05] 2025-06-05 09:22:53,742 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:23:05] 2025-06-05 09:22:53,742 | INFO     | pilot state: finished 
[2025-06-05 05:23:05] 2025-06-05 09:22:53,742 | INFO     | transexitcode: 0
[2025-06-05 05:23:05] 2025-06-05 09:22:53,742 | INFO     | exeerrorcode: 0
[2025-06-05 05:23:05] 2025-06-05 09:22:53,742 | INFO     | exeerrordiag: 
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | exitcode: 0
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | exitmsg: OK
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | cpuconsumptiontime: 49952 s
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | nevents: 400
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | neventsw: 0
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | pid: 4127266
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | pgrp: 4127266
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | corecount: 12
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | event service: False
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | sizes: {0: 2396563, 1: 2397248, 2: 2397447, 13: 2397447, 17: 2397709, 23: 2397737, 9819: 2426177, 9820: 2435118, 9823: 2435174, 9827: 2435344}
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | --------------------------------------------------
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | 
[2025-06-05 05:23:05] 2025-06-05 09:22:53,743 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 05:23:05] 2025-06-05 09:22:53,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,763 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,763 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,763 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,763 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,763 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:23:05] 2025-06-05 09:22:53,763 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,763 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:23:05] 2025-06-05 09:22:53,763 | INFO     | job 6667732240 has completed (purged errors)
[2025-06-05 05:23:05] 2025-06-05 09:22:53,763 | INFO     | overall cleanup function is called
[2025-06-05 05:23:05] 2025-06-05 09:22:54,770 | INFO     | --- collectZombieJob: --- 10, [4127266]
[2025-06-05 05:23:05] 2025-06-05 09:22:54,770 | INFO     | zombie collector waiting for pid 4127266
[2025-06-05 05:23:05] 2025-06-05 09:22:54,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:23:05] 2025-06-05 09:22:54,771 | INFO     | collected zombie processes
[2025-06-05 05:23:05] 2025-06-05 09:22:54,771 | INFO     | will attempt to kill all subprocesses of pid=4127266
[2025-06-05 05:23:05] 2025-06-05 09:22:54,978 | INFO     | process IDs to be killed: [4127266] (in reverse order)
[2025-06-05 05:23:05] 2025-06-05 09:22:55,058 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:23:05] 2025-06-05 09:22:55,059 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:23:05] 2025-06-05 09:22:55,069 | INFO     | did not find any defunct processes belonging to 4127266
[2025-06-05 05:23:05] 2025-06-05 09:22:55,079 | INFO     | did not find any defunct processes belonging to 4127266
[2025-06-05 05:23:05] 2025-06-05 09:22:55,079 | INFO     | ready for new job
[2025-06-05 05:23:05] 2025-06-05 09:22:55,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:23:05] 2025-06-05 09:22:55,081 | INFO     | **************************************
[2025-06-05 05:23:05] 2025-06-05 09:22:55,081 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:23:05] 2025-06-05 09:22:55,081 | INFO     | **************************************
[2025-06-05 05:23:05] 2025-06-05 09:22:55,081 | INFO     | 
[2025-06-05 05:23:05] 2025-06-05 09:22:55,096 | INFO     | architecture information:
[2025-06-05 05:23:05] 2025-06-05 09:22:55,097 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:23:05] 2025-06-05 09:22:55,110 | INFO     | cat /etc/os-release:
[2025-06-05 05:23:05] NAME="CentOS Linux"
[2025-06-05 05:23:05] VERSION="7 (Core)"
[2025-06-05 05:23:05] ID="centos"
[2025-06-05 05:23:05] ID_LIKE="rhel fedora"
[2025-06-05 05:23:05] VERSION_ID="7"
[2025-06-05 05:23:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:23:05] ANSI_COLOR="0;31"
[2025-06-05 05:23:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:23:05] HOME_URL="https://www.centos.org/"
[2025-06-05 05:23:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:23:05] 
[2025-06-05 05:23:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:23:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:23:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:23:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:23:05] 
[2025-06-05 05:23:05] 2025-06-05 09:22:55,110 | INFO     | **************************************
[2025-06-05 05:23:05] 2025-06-05 09:22:55,612 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 05:23:05] 2025-06-05 09:22:55,627 | INFO     | sufficient remaining disk space (76239863808 B)
[2025-06-05 05:23:05] 2025-06-05 09:22:55,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:23:05] 2025-06-05 09:22:55,628 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:23:05] 2025-06-05 09:22:55,628 | INFO     | update_server=False
[2025-06-05 05:23:05] 2025-06-05 09:22:55,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:23:05] 2025-06-05 09:22:55,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:23:05] 2025-06-05 09:22:55,688 | INFO     | all job control threads have been joined
[2025-06-05 05:23:05] 2025-06-05 09:22:56,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:23:05] 2025-06-05 09:22:56,035 | INFO     | aborting loop
[2025-06-05 05:23:05] 2025-06-05 09:22:56,339 | INFO     | all payload control threads have been joined
[2025-06-05 05:23:05] 2025-06-05 09:22:56,388 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:23:05] 2025-06-05 09:22:56,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:23:05] 2025-06-05 09:22:56,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:23:05] 2025-06-05 09:22:56,587 | INFO     | all data control threads have been joined
[2025-06-05 05:23:05] 2025-06-05 09:22:56,632 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:56,693 | INFO     | [job] control thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:56,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:23:05] 2025-06-05 09:22:57,040 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:57,051 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:57,197 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:57,343 | INFO     | [payload] control thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:57,592 | INFO     | [data] control thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:57,612 | INFO     | [job] validate thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:57,695 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:57,892 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:57,973 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:57,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:58,063 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:58,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:23:05] 2025-06-05 09:22:58,753 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:59,292 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:22:59,634 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:23:05] 2025-06-05 09:23:00,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067124426560)>', '<ExcThread(monitor, started 140066332604160)>']
[2025-06-05 05:23:05] 2025-06-05 09:23:00,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:23:05] 2025-06-05 09:23:00,411 | INFO     | [monitor] control thread has ended
[2025-06-05 05:23:05] 2025-06-05 09:23:05,427 | INFO     | all workflow threads have been joined
[2025-06-05 05:23:05] 2025-06-05 09:23:05,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:23:05] 2025-06-05 09:23:05,428 | INFO     | traces error code: 0
[2025-06-05 05:23:05] 2025-06-05 09:23:05,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:23:05] 2025-06-05 09:23:05,593 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:23:05] 2025-06-05 09:23:05,596 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:23:05] 2025-06-05 09:23:05,599 [wrapper] pilotpid: 4116757
[2025-06-05 05:23:05] 2025-06-05 09:23:05,602 [wrapper] Pilot exit status: 0
[2025-06-05 05:23:05] 2025-06-05 09:23:05,613 [wrapper] pandaids: 6667732240
[2025-06-05 05:23:05] 2025-06-05 09:23:05,669 [wrapper] cleanup supervisor_pilot  340805 4116758
[2025-06-05 05:23:05] 2025-06-05 09:23:05,672 [wrapper] Test setup, not cleaning
[2025-06-05 05:23:05] 2025-06-05 09:23:05,675 [wrapper] apfmon messages muted
[2025-06-05 05:23:05] 2025-06-05 09:23:05,678 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:23:05] 2025-06-05 09:23:05,682 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:23:05]  *** Error codes and diagnostics ***
[2025-06-05 05:23:05]     "exeErrorCode": 0,
[2025-06-05 05:23:05]     "exeErrorDiag": "",
[2025-06-05 05:23:05]     "pilotErrorCode": 0,
[2025-06-05 05:23:05]     "pilotErrorDiag": "",
[2025-06-05 05:23:05]  *** Listing of results directory ***
[2025-06-05 05:23:05] total 415308
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas    495897 May 27 19:30 pilot3.tar.gz
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas      5111 May 27 20:20 queuedata.json
[2025-06-05 05:23:05] -rwx------. 1 boincer umatlas     37140 May 27 20:20 runpilot2-wrapper.sh
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas       100 Jun  5 02:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:23:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 02:38 run_atlas
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas       105 Jun  5 02:38 job.xml
[2025-06-05 05:23:05] -rw-r--r--. 2 boincer umatlas 221190700 Jun  5 02:38 EVNT.44871834._002965.pool.root.1
[2025-06-05 05:23:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 02:38 start_atlas.sh
[2025-06-05 05:23:05] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 02:38 shared
[2025-06-05 05:23:05] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 02:38 input.tar.gz
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas         0 Jun  5 02:38 boinc_lockfile
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 02:38 pandaJob.out
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas    986926 Jun  5 02:38 agis_schedconf.cvmfs.json
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas   1598969 Jun  5 02:38 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:23:05] drwx------. 4 boincer umatlas      4096 Jun  5 02:38 pilot3
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas      6842 Jun  5 05:18 init_data.xml
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas 197695802 Jun  5 05:22 HITS.44871837._075674.pool.root.1
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas       530 Jun  5 05:22 boinc_task_state.xml
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas        95 Jun  5 05:22 pilot_heartbeat.json
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas      1042 Jun  5 05:22 memory_monitor_summary.json
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas    412796 Jun  5 05:22 log.44871837._075674.job.log.tgz.1
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas      7726 Jun  5 05:22 heartbeat.json
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 05:23 boinc_mmap_file
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas        27 Jun  5 05:23 wrapper_checkpoint.txt
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas      4353 Jun  5 05:23 pilotlog.txt
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas    865104 Jun  5 05:23 log.44871837._075674.job.log.1
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas       357 Jun  5 05:23 output.list
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas       620 Jun  5 05:23 runtime_log
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas   1300480 Jun  5 05:23 result.tar.gz
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 05:23 runtime_log.err
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas       654 Jun  5 05:23 e2QMDmFiJe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjlaKDmSRVW7n.diag
[2025-06-05 05:23:05] -rw-r--r--. 1 boincer umatlas     21334 Jun  5 05:23 stderr.txt
[2025-06-05 05:23:05] HITS file was successfully produced:
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas 197695802 Jun  5 05:22 shared/HITS.pool.root.1
[2025-06-05 05:23:05]  *** Contents of shared directory: ***
[2025-06-05 05:23:05] total 410864
[2025-06-05 05:23:05] -rw-r--r--. 2 boincer umatlas 221190700 Jun  5 02:38 ATLAS.root_0
[2025-06-05 05:23:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 02:38 start_atlas.sh
[2025-06-05 05:23:05] -rw-r--r--. 2 boincer umatlas    508875 Jun  5 02:38 input.tar.gz
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas 197695802 Jun  5 05:22 HITS.pool.root.1
[2025-06-05 05:23:05] -rw-------. 1 boincer umatlas   1300480 Jun  5 05:23 result.tar.gz
05:23:06 (4113065): run_atlas exited; CPU time 50151.428234
05:23:06 (4113065): called boinc_finish(0)

</stderr_txt>
]]>

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