Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:29:13 (351028): wrapper (7.7.26015): starting
02:29:13 (351028): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:29:13] Arguments: --nthreads 8
[2025-06-05 02:29:13] Threads: 8
[2025-06-05 02:29:13] Checking for CVMFS
[2025-06-05 02:29:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:29:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:29:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:29:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:29:13] 2.12.6.0 183172 127 31148 146809 2 1 99869 40960000 0 16776704 0 45 89.796 5183 61702 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 02:29:13] CVMFS is ok
[2025-06-05 02:29:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:29:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:29:13] Further information can be found at the LHC@home message board.
[2025-06-05 02:29:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:29:13] Checking for apptainer binary...
[2025-06-05 02:29:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:29:13] Running /usr/bin/apptainer --version
[2025-06-05 02:29:13] apptainer version 1.4.1-1.el9
[2025-06-05 02:29:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:29:14] c-1-1.aglt2.org
[2025-06-05 02:29:14] apptainer works
[2025-06-05 02:29:14] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:29:14] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:29:14] Starting ATLAS job with PandaID=6667821063
[2025-06-05 02:29:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:30:29]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:30:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 03:30:29]  is_altstaged=None
[2025-06-05 03:30:29]  is_tar=False
[2025-06-05 03:30:29]  lfn=log.44871837._075973.job.log.tgz.1
[2025-06-05 03:30:29]  mtime=0
[2025-06-05 03:30:29]  protocol_id=None
[2025-06-05 03:30:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 03:30:29]  replicas=None
[2025-06-05 03:30:29]  scope=mc23_13p6TeV
[2025-06-05 03:30:29]  status=None
[2025-06-05 03:30:29]  status_code=0
[2025-06-05 03:30:29]  storage_token=
[2025-06-05 03:30:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667821063/log.44871837._075973.job.log.tgz.1
[2025-06-05 03:30:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/bf/log.44871837._075973.job.log.tgz.1
[2025-06-05 03:30:29]  workdir=None
[2025-06-05 03:30:29] ]
[2025-06-05 03:30:29] 2025-06-05 07:30:04,388 | INFO     | transferring file log.44871837._075973.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667821063/log.44871837._075973.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 03:30:29] 2025-06-05 07:30:04,388 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667821063/log.44871837._075973.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._075973.job
[2025-06-05 03:30:29] 2025-06-05 07:30:04,399 | INFO     | adding to output.list: log.44871837._075973.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f0/bf/log.44871837._075973.job.log.tg
[2025-06-05 03:30:29] 2025-06-05 07:30:04,399 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 03:30:29] 2025-06-05 07:30:04,399 | INFO     | summary of transferred files:
[2025-06-05 03:30:29] 2025-06-05 07:30:04,400 | INFO     |  -- lfn=log.44871837._075973.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 03:30:29] 2025-06-05 07:30:04,400 | INFO     | stage-out finished correctly
[2025-06-05 03:30:29] 2025-06-05 07:30:04,444 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 03:30:29] 2025-06-05 07:30:05,034 | INFO     | monitor loop #278: job 0:6667821063 is in state 'finished'
[2025-06-05 03:30:29] 2025-06-05 07:30:05,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:30:29] 2025-06-05 07:30:07,060 | INFO     | job 6667821063 has state=finished
[2025-06-05 03:30:29] 2025-06-05 07:30:07,060 | INFO     | preparing for final server update for job 6667821063 in state='finished'
[2025-06-05 03:30:29] 2025-06-05 07:30:07,060 | INFO     | this job has now completed (state=finished)
[2025-06-05 03:30:29] 2025-06-05 07:30:07,061 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 03:30:29] 2025-06-05 07:30:07,061 | INFO     | log transfer has been attempted: DONE
[2025-06-05 03:30:29] 2025-06-05 07:30:07,061 | INFO     | job 6667821063 has finished - writing final server update
[2025-06-05 03:30:29] 2025-06-05 07:30:07,061 | INFO     | total number of processed events: 400 (read)
[2025-06-05 03:30:29] 2025-06-05 07:30:07,075 | INFO     | executing command: lscpu
[2025-06-05 03:30:29] 2025-06-05 07:30:07,141 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 03:30:29] 2025-06-05 07:30:07,536 | INFO     | monitor loop #279: job 0:6667821063 is in state 'finished'
[2025-06-05 03:30:29] 2025-06-05 07:30:07,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:30:29] 2025-06-05 07:30:09,319 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 03:30:29] 2025-06-05 07:30:09,319 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667821063/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:30:29] 2025-06-05 07:30:09,320 | INFO     | extracted standard info from prmon json
[2025-06-05 03:30:29] 2025-06-05 07:30:09,320 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:30:29] 2025-06-05 07:30:09,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:30:29] 2025-06-05 07:30:09,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:30:29] 2025-06-05 07:30:09,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:30:29] 2025-06-05 07:30:09,321 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:30:29] 2025-06-05 07:30:09,321 | INFO     | sum of square deviations: 46147842.0
[2025-06-05 03:30:29] 2025-06-05 07:30:09,321 | INFO     | sum of deviations: -7360296966.000001
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | mean x: 1749106876.0
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | mean y: 2550528.8113207547
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | -- intersect: 278974339342.5232
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | intersect: 278974339342.5232
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | chi2: 0.1230843386410842
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | -- intersect: 278974339342.5232
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | current memory leak: -159.49 B/s (using 53 data points, chi2=0.12)
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | ..............................
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | . Timing measurements:
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | . get job = 0 s
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | . initial setup = 2 s
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | . payload setup = 5 s
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | . stage-in = 0 s
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | . payload execution = 3617 s
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | . stage-out = 0 s
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | . log creation = 0 s
[2025-06-05 03:30:29] 2025-06-05 07:30:09,322 | INFO     | ..............................
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | 
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | job summary report
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | --------------------------------------------------
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | PanDA job id: 6667821063
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | task id: 44871837
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | errors: (none)
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | pilot state: finished 
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | transexitcode: 0
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | exeerrorcode: 0
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | exeerrordiag: 
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | exitcode: 0
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | exitmsg: OK
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | cpuconsumptiontime: 26921 s
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | nevents: 400
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | neventsw: 0
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | pid: 361137
[2025-06-05 03:30:29] 2025-06-05 07:30:09,371 | INFO     | pgrp: 361137
[2025-06-05 03:30:29] 2025-06-05 07:30:09,372 | INFO     | corecount: 8
[2025-06-05 03:30:29] 2025-06-05 07:30:09,372 | INFO     | event service: False
[2025-06-05 03:30:29] 2025-06-05 07:30:09,372 | INFO     | sizes: {0: 2397227, 1: 2397369, 3: 2397575, 11: 2397603, 3626: 2423140, 3628: 2432265, 3633: 2432379}
[2025-06-05 03:30:29] 2025-06-05 07:30:09,372 | INFO     | --------------------------------------------------
[2025-06-05 03:30:29] 2025-06-05 07:30:09,372 | INFO     | 
[2025-06-05 03:30:29] 2025-06-05 07:30:09,372 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 03:30:29] 2025-06-05 07:30:09,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:30:29] 2025-06-05 07:30:09,383 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:30:29] 2025-06-05 07:30:09,384 | INFO     | job 6667821063 has completed (purged errors)
[2025-06-05 03:30:29] 2025-06-05 07:30:09,384 | INFO     | overall cleanup function is called
[2025-06-05 03:30:29] 2025-06-05 07:30:10,390 | INFO     | --- collectZombieJob: --- 10, [361137]
[2025-06-05 03:30:29] 2025-06-05 07:30:10,391 | INFO     | zombie collector waiting for pid 361137
[2025-06-05 03:30:29] 2025-06-05 07:30:10,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:30:29] 2025-06-05 07:30:10,391 | INFO     | collected zombie processes
[2025-06-05 03:30:29] 2025-06-05 07:30:10,391 | INFO     | will attempt to kill all subprocesses of pid=361137
[2025-06-05 03:30:29] 2025-06-05 07:30:10,462 | INFO     | PID=354703 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 03:30:29] 2025-06-05 07:30:10,463 | INFO     | .. there are 2 such processes running
[2025-06-05 03:30:29] 2025-06-05 07:30:10,565 | INFO     | process IDs to be killed: [361137] (in reverse order)
[2025-06-05 03:30:29] 2025-06-05 07:30:10,611 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:30:29] 2025-06-05 07:30:10,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:30:29] 2025-06-05 07:30:10,616 | INFO     | did not find any defunct processes belonging to 361137
[2025-06-05 03:30:29] 2025-06-05 07:30:10,620 | INFO     | did not find any defunct processes belonging to 361137
[2025-06-05 03:30:29] 2025-06-05 07:30:10,620 | INFO     | ready for new job
[2025-06-05 03:30:29] 2025-06-05 07:30:10,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:30:29] 2025-06-05 07:30:10,622 | INFO     | **************************************
[2025-06-05 03:30:29] 2025-06-05 07:30:10,622 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:30:29] 2025-06-05 07:30:10,622 | INFO     | **************************************
[2025-06-05 03:30:29] 2025-06-05 07:30:10,622 | INFO     | 
[2025-06-05 03:30:29] 2025-06-05 07:30:10,636 | INFO     | architecture information:
[2025-06-05 03:30:29] 2025-06-05 07:30:10,637 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:30:29] 2025-06-05 07:30:10,645 | INFO     | cat /etc/os-release:
[2025-06-05 03:30:29] NAME="CentOS Linux"
[2025-06-05 03:30:29] VERSION="7 (Core)"
[2025-06-05 03:30:29] ID="centos"
[2025-06-05 03:30:29] ID_LIKE="rhel fedora"
[2025-06-05 03:30:29] VERSION_ID="7"
[2025-06-05 03:30:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:30:29] ANSI_COLOR="0;31"
[2025-06-05 03:30:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:30:29] HOME_URL="https://www.centos.org/"
[2025-06-05 03:30:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:30:29] 
[2025-06-05 03:30:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:30:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:30:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:30:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:30:29] 
[2025-06-05 03:30:29] 2025-06-05 07:30:10,646 | INFO     | **************************************
[2025-06-05 03:30:29] 2025-06-05 07:30:11,148 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 03:30:29] 2025-06-05 07:30:11,159 | INFO     | sufficient remaining disk space (107920490496 B)
[2025-06-05 03:30:29] 2025-06-05 07:30:11,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:30:29] 2025-06-05 07:30:11,159 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:30:29] 2025-06-05 07:30:11,159 | INFO     | update_server=False
[2025-06-05 03:30:29] 2025-06-05 07:30:11,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:30:29] 2025-06-05 07:30:11,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:30:29] 2025-06-05 07:30:11,160 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:30:29] 2025-06-05 07:30:11,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:30:29] 2025-06-05 07:30:11,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:30:29] 2025-06-05 07:30:11,160 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:30:29] 2025-06-05 07:30:11,161 | INFO     | aborting loop
[2025-06-05 03:30:29] 2025-06-05 07:30:11,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:30:29] 2025-06-05 07:30:11,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:30:29] 2025-06-05 07:30:11,261 | INFO     | all payload control threads have been joined
[2025-06-05 03:30:29] 2025-06-05 07:30:11,672 | INFO     | all data control threads have been joined
[2025-06-05 03:30:29] 2025-06-05 07:30:11,745 | INFO     | all job control threads have been joined
[2025-06-05 03:30:29] 2025-06-05 07:30:12,165 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:12,166 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:12,166 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:12,267 | INFO     | [payload] control thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:12,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:30:29] 2025-06-05 07:30:12,677 | INFO     | [data] control thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:12,750 | INFO     | [job] control thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:12,753 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:12,960 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:13,053 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:13,263 | INFO     | [job] validate thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:13,518 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:13,649 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:13,668 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:14,461 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:15,166 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:21,283 | INFO     | job.realtimelogging is not enabled
[2025-06-05 03:30:29] 2025-06-05 07:30:22,289 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:30:29] 2025-06-05 07:30:23,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140029202585408)>', '<ExcThread(monitor, started 140028835501824)>']
[2025-06-05 03:30:29] 2025-06-05 07:30:24,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:30:29] 2025-06-05 07:30:24,206 | INFO     | [monitor] control thread has ended
[2025-06-05 03:30:29] 2025-06-05 07:30:29,018 | INFO     | all workflow threads have been joined
[2025-06-05 03:30:29] 2025-06-05 07:30:29,018 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:30:29] 2025-06-05 07:30:29,018 | INFO     | traces error code: 0
[2025-06-05 03:30:29] 2025-06-05 07:30:29,018 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:30:29] 2025-06-05 07:30:29,094 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:30:29] 2025-06-05 07:30:29,096 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:30:29] 2025-06-05 07:30:29,097 [wrapper] pilotpid: 354703
[2025-06-05 03:30:29] 2025-06-05 07:30:29,099 [wrapper] Pilot exit status: 0
[2025-06-05 03:30:29] 2025-06-05 07:30:29,107 [wrapper] pandaids: 6667821063
[2025-06-05 03:30:29] 2025-06-05 07:30:29,140 [wrapper] cleanup supervisor_pilot  452631 354704
[2025-06-05 03:30:29] 2025-06-05 07:30:29,142 [wrapper] Test setup, not cleaning
[2025-06-05 03:30:29] 2025-06-05 07:30:29,143 [wrapper] apfmon messages muted
[2025-06-05 03:30:29] 2025-06-05 07:30:29,145 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:30:29] 2025-06-05 07:30:29,146 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:30:29]  *** Error codes and diagnostics ***
[2025-06-05 03:30:29]     "exeErrorCode": 0,
[2025-06-05 03:30:29]     "exeErrorDiag": "",
[2025-06-05 03:30:29]     "pilotErrorCode": 0,
[2025-06-05 03:30:29]     "pilotErrorDiag": "",
[2025-06-05 03:30:29]  *** Listing of results directory ***
[2025-06-05 03:30:29] total 418864
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas    495897 May 27 19:30 pilot3.tar.gz
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas      5111 May 27 20:30 queuedata.json
[2025-06-05 03:30:29] -rwx------. 1 boincer umatlas     37140 May 27 20:31 runpilot2-wrapper.sh
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas       100 Jun  5 02:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:30:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 02:29 run_atlas
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas       105 Jun  5 02:29 job.xml
[2025-06-05 03:30:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 02:29 start_atlas.sh
[2025-06-05 03:30:29] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 02:29 shared
[2025-06-05 03:30:29] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 02:29 input.tar.gz
[2025-06-05 03:30:29] -rw-r--r--. 2 boincer umatlas 227311464 Jun  5 02:29 EVNT.44871834._002974.pool.root.1
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas         0 Jun  5 02:29 boinc_lockfile
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas      2558 Jun  5 02:29 pandaJob.out
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas    986926 Jun  5 02:29 agis_schedconf.cvmfs.json
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas   1598969 Jun  5 02:29 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:30:29] drwx------. 4 boincer umatlas      4096 Jun  5 02:29 pilot3
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas      6832 Jun  5 03:27 init_data.xml
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas 196468735 Jun  5 03:29 HITS.44871837._075973.pool.root.1
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas       529 Jun  5 03:29 boinc_task_state.xml
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas      1022 Jun  5 03:29 memory_monitor_summary.json
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas        95 Jun  5 03:30 pilot_heartbeat.json
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas    289059 Jun  5 03:30 log.44871837._075973.job.log.tgz.1
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas      7696 Jun  5 03:30 heartbeat.json
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 03:30 boinc_mmap_file
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas        27 Jun  5 03:30 wrapper_checkpoint.txt
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas      4549 Jun  5 03:30 pilotlog.txt
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas    367781 Jun  5 03:30 log.44871837._075973.job.log.1
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas       357 Jun  5 03:30 output.list
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas       620 Jun  5 03:30 runtime_log
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas    675840 Jun  5 03:30 result.tar.gz
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas      8644 Jun  5 03:30 runtime_log.err
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas       646 Jun  5 03:30 Nm7NDmksJe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJoaKDm8zLbMn.diag
[2025-06-05 03:30:29] -rw-r--r--. 1 boincer umatlas     21388 Jun  5 03:30 stderr.txt
[2025-06-05 03:30:29] HITS file was successfully produced:
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas 196468735 Jun  5 03:29 shared/HITS.pool.root.1
[2025-06-05 03:30:29]  *** Contents of shared directory: ***
[2025-06-05 03:30:29] total 415028
[2025-06-05 03:30:29] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 02:29 start_atlas.sh
[2025-06-05 03:30:29] -rw-r--r--. 2 boincer umatlas    508879 Jun  5 02:29 input.tar.gz
[2025-06-05 03:30:29] -rw-r--r--. 2 boincer umatlas 227311464 Jun  5 02:29 ATLAS.root_0
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas 196468735 Jun  5 03:29 HITS.pool.root.1
[2025-06-05 03:30:29] -rw-------. 1 boincer umatlas    675840 Jun  5 03:30 result.tar.gz
03:30:30 (351028): run_atlas exited; CPU time 26969.218071
03:30:30 (351028): called boinc_finish(0)

</stderr_txt>
]]>

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