Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:21:22 (236576): wrapper (7.7.26015): starting
02:21:22 (236576): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:21:22] Arguments: --nthreads 8
[2025-06-05 02:21:22] Threads: 8
[2025-06-05 02:21:22] Checking for CVMFS
[2025-06-05 02:21:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:21:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:21:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:21:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:21:24] 2.11.2.0 125399 13788 235536 146809 2 33 14109040 18432000 24211 130560 0 111046069 99.367 124124789 38617 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 02:21:24] CVMFS is ok
[2025-06-05 02:21:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:21:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:21:24] Further information can be found at the LHC@home message board.
[2025-06-05 02:21:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:21:24] Checking for apptainer binary...
[2025-06-05 02:21:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:21:24] Running /usr/bin/apptainer --version
[2025-06-05 02:21:25] apptainer version 1.3.2-1.el7
[2025-06-05 02:21:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:21:41] c-211-35-2.aglt2.org
[2025-06-05 02:21:41] apptainer works
[2025-06-05 02:21:42] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:21:42] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:21:42] Starting ATLAS job with PandaID=6667820074
[2025-06-05 02:21:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:29:02]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:29:02] 2025-06-05 10:28:47,003 | INFO     | sum of deviations: 122598855551.89658
[2025-06-05 06:29:02] 2025-06-05 10:28:47,003 | INFO     | mean x: 1749111917.5948277
[2025-06-05 06:29:02] 2025-06-05 10:28:47,003 | INFO     | mean y: 2420829.4137931033
[2025-06-05 06:29:02] 2025-06-05 10:28:47,003 | INFO     | -- intersect: -55381001329.778244
[2025-06-05 06:29:02] 2025-06-05 10:28:47,003 | INFO     | intersect: -55381001329.778244
[2025-06-05 06:29:02] 2025-06-05 10:28:47,003 | INFO     | chi2: 6.137586925287221
[2025-06-05 06:29:02] 2025-06-05 10:28:47,004 | INFO     | current chi2=6.137586925287221 (change=-0.13272210595768852 %)
[2025-06-05 06:29:02] 2025-06-05 10:28:47,004 | INFO     | right removable region: 231
[2025-06-05 06:29:02] 2025-06-05 10:28:47,004 | INFO     | sum of square deviations: 3871887429.913776
[2025-06-05 06:29:02] 2025-06-05 10:28:47,006 | INFO     | sum of deviations: 46473185773.80168
[2025-06-05 06:29:02] 2025-06-05 10:28:47,006 | INFO     | mean x: 1749112222.5948277
[2025-06-05 06:29:02] 2025-06-05 10:28:47,006 | INFO     | mean y: 2469979.168103448
[2025-06-05 06:29:02] 2025-06-05 10:28:47,006 | INFO     | -- intersect: -20991636572.552277
[2025-06-05 06:29:02] 2025-06-05 10:28:47,006 | INFO     | intersect: -20991636572.552277
[2025-06-05 06:29:02] 2025-06-05 10:28:47,006 | INFO     | chi2: 1.5563367248088975
[2025-06-05 06:29:02] 2025-06-05 10:28:47,006 | INFO     | current chi2=1.5563367248088975 (change=74.60887565982736 %)
[2025-06-05 06:29:02] 2025-06-05 10:28:47,007 | INFO     | sum of square deviations: 3626890079.8678393
[2025-06-05 06:29:02] 2025-06-05 10:28:47,008 | INFO     | sum of deviations: 4791420836.973568
[2025-06-05 06:29:02] 2025-06-05 10:28:47,008 | INFO     | mean x: 1749112375.0969162
[2025-06-05 06:29:02] 2025-06-05 10:28:47,008 | INFO     | mean y: 2495813.81938326
[2025-06-05 06:29:02] 2025-06-05 10:28:47,008 | INFO     | -- intersect: -2308225850.1117935
[2025-06-05 06:29:02] 2025-06-05 10:28:47,009 | INFO     | intersect: -2308225850.1117935
[2025-06-05 06:29:02] 2025-06-05 10:28:47,009 | INFO     | chi2: 0.22788381389986517
[2025-06-05 06:29:02] 2025-06-05 10:28:47,009 | INFO     | current chi2=0.22788381389986517 (change=85.35767933331735 %)
[2025-06-05 06:29:02] 2025-06-05 10:28:47,009 | INFO     | sum of square deviations: 3392464791.513517
[2025-06-05 06:29:02] 2025-06-05 10:28:47,011 | INFO     | sum of deviations: -9079020815.972979
[2025-06-05 06:29:02] 2025-06-05 10:28:47,011 | INFO     | mean x: 1749112527.5945945
[2025-06-05 06:29:02] 2025-06-05 10:28:47,011 | INFO     | mean y: 2504807.5225225226
[2025-06-05 06:29:02] 2025-06-05 10:28:47,011 | INFO     | -- intersect: 4683534685.042819
[2025-06-05 06:29:02] 2025-06-05 10:28:47,011 | INFO     | intersect: 4683534685.042819
[2025-06-05 06:29:02] 2025-06-05 10:28:47,012 | INFO     | chi2: 0.08134729728738399
[2025-06-05 06:29:02] 2025-06-05 10:28:47,012 | INFO     | current chi2=0.08134729728738399 (change=64.30317015708323 %)
[2025-06-05 06:29:02] 2025-06-05 10:28:47,012 | INFO     | sum of square deviations: 3168351858.967751
[2025-06-05 06:29:02] 2025-06-05 10:28:47,013 | INFO     | sum of deviations: -13784524017.387094
[2025-06-05 06:29:02] 2025-06-05 10:28:47,014 | INFO     | mean x: 1749112680.096774
[2025-06-05 06:29:02] 2025-06-05 10:28:47,014 | INFO     | mean y: 2507975.875576037
[2025-06-05 06:29:02] 2025-06-05 10:28:47,014 | INFO     | -- intersect: 7612359034.452622
[2025-06-05 06:29:02] 2025-06-05 10:28:47,014 | INFO     | intersect: 7612359034.452622
[2025-06-05 06:29:02] 2025-06-05 10:28:47,014 | INFO     | chi2: 0.04640163066032987
[2025-06-05 06:29:02] 2025-06-05 10:28:47,014 | INFO     | current chi2=0.04640163066032987 (change=42.95860808208287 %)
[2025-06-05 06:29:02] 2025-06-05 10:28:47,015 | INFO     | sum of square deviations: 2954332138.919797
[2025-06-05 06:29:02] 2025-06-05 10:28:47,016 | INFO     | sum of deviations: -11960415830.216978
[2025-06-05 06:29:02] 2025-06-05 10:28:47,016 | INFO     | mean x: 1749112832.5990567
[2025-06-05 06:29:02] 2025-06-05 10:28:47,016 | INFO     | mean y: 2506671.9150943398
[2025-06-05 06:29:02] 2025-06-05 10:28:47,016 | INFO     | -- intersect: 7083672846.9215765
[2025-06-05 06:29:02] 2025-06-05 10:28:47,016 | INFO     | intersect: 7083672846.9215765
[2025-06-05 06:29:02] 2025-06-05 10:28:47,017 | INFO     | chi2: 0.04568177462287721
[2025-06-05 06:29:02] 2025-06-05 10:28:47,017 | INFO     | current chi2=0.04568177462287721 (change=1.5513593535584302 %)
[2025-06-05 06:29:02] 2025-06-05 10:28:47,017 | INFO     | left removable region: 50
[2025-06-05 06:29:02] 2025-06-05 10:28:47,017 | INFO     | sum of square deviations: 1838630291.2044246
[2025-06-05 06:29:02] 2025-06-05 10:28:47,018 | INFO     | sum of deviations: 3780801236.696133
[2025-06-05 06:29:02] 2025-06-05 10:28:47,018 | INFO     | mean x: 1749113412.0662982
[2025-06-05 06:29:02] 2025-06-05 10:28:47,018 | INFO     | mean y: 2492643.44198895
[2025-06-05 06:29:02] 2025-06-05 10:28:47,018 | INFO     | -- intersect: -3594233780.0795484
[2025-06-05 06:29:02] 2025-06-05 10:28:47,019 | INFO     | intersect: -3594233780.0795484
[2025-06-05 06:29:02] 2025-06-05 10:28:47,019 | INFO     | chi2: 0.00023809841158541656
[2025-06-05 06:29:02] 2025-06-05 10:28:47,019 | INFO     | -- intersect: -3594233780.0795484
[2025-06-05 06:29:02] 2025-06-05 10:28:47,019 | INFO     | current memory leak: 2.06 B/s (using 181 data points, chi2=0.00)
[2025-06-05 06:29:02] 2025-06-05 10:28:47,020 | INFO     | ..............................
[2025-06-05 06:29:02] 2025-06-05 10:28:47,020 | INFO     | . Timing measurements:
[2025-06-05 06:29:02] 2025-06-05 10:28:47,020 | INFO     | . get job = 1 s
[2025-06-05 06:29:02] 2025-06-05 10:28:47,020 | INFO     | . initial setup = 11 s
[2025-06-05 06:29:02] 2025-06-05 10:28:47,020 | INFO     | . payload setup = 97 s
[2025-06-05 06:29:02] 2025-06-05 10:28:47,020 | INFO     | . stage-in = 0 s
[2025-06-05 06:29:02] 2025-06-05 10:28:47,020 | INFO     | . payload execution = 14503 s
[2025-06-05 06:29:02] 2025-06-05 10:28:47,020 | INFO     | . stage-out = 2 s
[2025-06-05 06:29:02] 2025-06-05 10:28:47,020 | INFO     | . log creation = 0 s
[2025-06-05 06:29:02] 2025-06-05 10:28:47,020 | INFO     | ..............................
[2025-06-05 06:29:02] 2025-06-05 10:28:47,351 | INFO     | 
[2025-06-05 06:29:02] 2025-06-05 10:28:47,351 | INFO     | job summary report
[2025-06-05 06:29:02] 2025-06-05 10:28:47,351 | INFO     | --------------------------------------------------
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | PanDA job id: 6667820074
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | task id: 44871837
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | errors: (none)
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | pilot state: finished 
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | transexitcode: 0
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | exeerrorcode: 0
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | exeerrordiag: 
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | exitcode: 0
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | exitmsg: OK
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | cpuconsumptiontime: 55051 s
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | nevents: 400
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | neventsw: 0
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | pid: 266223
[2025-06-05 06:29:02] 2025-06-05 10:28:47,352 | INFO     | pgrp: 266223
[2025-06-05 06:29:02] 2025-06-05 10:28:47,353 | INFO     | corecount: 8
[2025-06-05 06:29:02] 2025-06-05 10:28:47,353 | INFO     | event service: False
[2025-06-05 06:29:02] 2025-06-05 10:28:47,353 | INFO     | sizes: {0: 2397171, 1: 2397199, 2: 2397398, 13: 2397398, 24: 2397454, 35: 2397482, 45: 2397844, 46: 2397872, 14604: 2428497, 14605: 2428496, 14607: 2437493, 14608:
[2025-06-05 06:29:02] 2025-06-05 10:28:47,353 | INFO     | --------------------------------------------------
[2025-06-05 06:29:02] 2025-06-05 10:28:47,353 | INFO     | 
[2025-06-05 06:29:02] 2025-06-05 10:28:47,353 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 06:29:02] 2025-06-05 10:28:47,378 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,378 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,378 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,378 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:29:02] 2025-06-05 10:28:47,379 | INFO     | job 6667820074 has completed (purged errors)
[2025-06-05 06:29:02] 2025-06-05 10:28:47,380 | INFO     | overall cleanup function is called
[2025-06-05 06:29:02] 2025-06-05 10:28:48,387 | INFO     | --- collectZombieJob: --- 10, [266223]
[2025-06-05 06:29:02] 2025-06-05 10:28:48,387 | INFO     | zombie collector waiting for pid 266223
[2025-06-05 06:29:02] 2025-06-05 10:28:48,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:29:02] 2025-06-05 10:28:48,388 | INFO     | collected zombie processes
[2025-06-05 06:29:02] 2025-06-05 10:28:48,388 | INFO     | will attempt to kill all subprocesses of pid=266223
[2025-06-05 06:29:02] 2025-06-05 10:28:48,645 | INFO     | process IDs to be killed: [266223] (in reverse order)
[2025-06-05 06:29:02] 2025-06-05 10:28:48,753 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:29:02] 2025-06-05 10:28:48,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:29:02] 2025-06-05 10:28:48,763 | INFO     | did not find any defunct processes belonging to 266223
[2025-06-05 06:29:02] 2025-06-05 10:28:48,773 | INFO     | did not find any defunct processes belonging to 266223
[2025-06-05 06:29:02] 2025-06-05 10:28:48,773 | INFO     | ready for new job
[2025-06-05 06:29:02] 2025-06-05 10:28:48,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:29:02] 2025-06-05 10:28:48,776 | INFO     | **************************************
[2025-06-05 06:29:02] 2025-06-05 10:28:48,776 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:29:02] 2025-06-05 10:28:48,776 | INFO     | **************************************
[2025-06-05 06:29:02] 2025-06-05 10:28:48,776 | INFO     | 
[2025-06-05 06:29:02] 2025-06-05 10:28:48,781 | INFO     | architecture information:
[2025-06-05 06:29:02] 2025-06-05 10:28:48,782 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:29:02] 2025-06-05 10:28:48,805 | INFO     | cat /etc/os-release:
[2025-06-05 06:29:02] NAME="CentOS Linux"
[2025-06-05 06:29:02] VERSION="7 (Core)"
[2025-06-05 06:29:02] ID="centos"
[2025-06-05 06:29:02] ID_LIKE="rhel fedora"
[2025-06-05 06:29:02] VERSION_ID="7"
[2025-06-05 06:29:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:29:02] ANSI_COLOR="0;31"
[2025-06-05 06:29:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:29:02] HOME_URL="https://www.centos.org/"
[2025-06-05 06:29:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:29:02] 
[2025-06-05 06:29:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:29:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:29:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:29:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:29:02] 
[2025-06-05 06:29:02] 2025-06-05 10:28:48,805 | INFO     | **************************************
[2025-06-05 06:29:02] 2025-06-05 10:28:49,308 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 06:29:02] 2025-06-05 10:28:49,335 | INFO     | sufficient remaining disk space (106573070336 B)
[2025-06-05 06:29:02] 2025-06-05 10:28:49,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:29:02] 2025-06-05 10:28:49,336 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:29:02] 2025-06-05 10:28:49,336 | INFO     | update_server=False
[2025-06-05 06:29:02] 2025-06-05 10:28:49,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:29:02] 2025-06-05 10:28:49,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:29:02] 2025-06-05 10:28:49,400 | INFO     | all payload control threads have been joined
[2025-06-05 06:29:02] 2025-06-05 10:28:49,601 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:29:02] 2025-06-05 10:28:49,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:29:02] 2025-06-05 10:28:49,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:29:02] 2025-06-05 10:28:49,909 | INFO     | all data control threads have been joined
[2025-06-05 06:29:02] 2025-06-05 10:28:50,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:29:02] 2025-06-05 10:28:50,163 | INFO     | aborting loop
[2025-06-05 06:29:02] 2025-06-05 10:28:50,342 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:50,406 | INFO     | [payload] control thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:50,493 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:50,538 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:50,546 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:50,566 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:50,574 | INFO     | all job control threads have been joined
[2025-06-05 06:29:02] 2025-06-05 10:28:50,595 | INFO     | [job] validate thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:50,856 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:50,915 | INFO     | [data] control thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:51,166 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:51,248 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:51,343 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:51,419 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:51,579 | INFO     | [job] control thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:52,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:29:02] 2025-06-05 10:28:52,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:29:02] 2025-06-05 10:28:53,140 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:56,446 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:29:02] 2025-06-05 10:28:57,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139636523046720)>', '<ExcThread(monitor, started 139636080891648)>']
[2025-06-05 06:29:02] 2025-06-05 10:28:57,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:29:02] 2025-06-05 10:28:57,643 | INFO     | [monitor] control thread has ended
[2025-06-05 06:29:02] 2025-06-05 10:29:02,273 | INFO     | all workflow threads have been joined
[2025-06-05 06:29:02] 2025-06-05 10:29:02,277 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:29:02] 2025-06-05 10:29:02,277 | INFO     | traces error code: 0
[2025-06-05 06:29:02] 2025-06-05 10:29:02,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:29:02] 2025-06-05 10:29:02,568 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:29:02] 2025-06-05 10:29:02,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:29:02] 2025-06-05 10:29:02,576 [wrapper] pilotpid: 246949
[2025-06-05 06:29:02] 2025-06-05 10:29:02,578 [wrapper] Pilot exit status: 0
[2025-06-05 06:29:02] 2025-06-05 10:29:02,589 [wrapper] pandaids: 6667820074
[2025-06-05 06:29:02] 2025-06-05 10:29:02,666 [wrapper] cleanup supervisor_pilot 111532 246950
[2025-06-05 06:29:02] 2025-06-05 10:29:02,668 [wrapper] Test setup, not cleaning
[2025-06-05 06:29:02] 2025-06-05 10:29:02,671 [wrapper] apfmon messages muted
[2025-06-05 06:29:02] 2025-06-05 10:29:02,674 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:29:02] 2025-06-05 10:29:02,677 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:29:02]  *** Error codes and diagnostics ***
[2025-06-05 06:29:02]     "exeErrorCode": 0,
[2025-06-05 06:29:02]     "exeErrorDiag": "",
[2025-06-05 06:29:02]     "pilotErrorCode": 0,
[2025-06-05 06:29:02]     "pilotErrorDiag": "",
[2025-06-05 06:29:02]  *** Listing of results directory ***
[2025-06-05 06:29:02] total 418208
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas    495897 May 27 19:30 pilot3.tar.gz
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas      5111 May 27 20:20 queuedata.json
[2025-06-05 06:29:02] -rwx------ 1 boincer umatlas     37140 May 27 20:24 runpilot2-wrapper.sh
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas       100 Jun  5 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:29:02] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 02:21 run_atlas
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas       105 Jun  5 02:21 job.xml
[2025-06-05 06:29:02] -rw-r--r-- 2 boincer umatlas 223127848 Jun  5 02:21 EVNT.44871834._001430.pool.root.1
[2025-06-05 06:29:02] drwxrwx--x 2 boincer umatlas      4096 Jun  5 02:21 shared
[2025-06-05 06:29:02] -rw-r--r-- 2 boincer umatlas    508889 Jun  5 02:21 input.tar.gz
[2025-06-05 06:29:02] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 02:21 start_atlas.sh
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas         0 Jun  5 02:21 boinc_lockfile
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 02:21 pandaJob.out
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas    986926 Jun  5 02:23 agis_schedconf.cvmfs.json
[2025-06-05 06:29:02] drwx------ 4 boincer umatlas      4096 Jun  5 02:23 pilot3
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas      6385 Jun  5 06:22 init_data.xml
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas 197942108 Jun  5 06:27 HITS.44871837._075732.pool.root.1
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas       531 Jun  5 06:28 boinc_task_state.xml
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas      1061 Jun  5 06:28 memory_monitor_summary.json
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas   1598969 Jun  5 06:28 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas    414098 Jun  5 06:28 log.44871837._075732.job.log.tgz.1
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas        95 Jun  5 06:28 pilot_heartbeat.json
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas      7757 Jun  5 06:28 heartbeat.json
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 06:28 boinc_mmap_file
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas        28 Jun  5 06:28 wrapper_checkpoint.txt
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas      4354 Jun  5 06:29 pilotlog.txt
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas   1258891 Jun  5 06:29 log.44871837._075732.job.log.1
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas       357 Jun  5 06:29 output.list
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas       620 Jun  5 06:29 runtime_log
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas   1689600 Jun  5 06:29 result.tar.gz
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas       663 Jun  5 06:29 wVNMDmTmJe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6cSKDmxDZwAn.diag
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas      8670 Jun  5 06:29 runtime_log.err
[2025-06-05 06:29:02] -rw-r--r-- 1 boincer umatlas     20875 Jun  5 06:29 stderr.txt
[2025-06-05 06:29:02] HITS file was successfully produced:
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas 197942108 Jun  5 06:27 shared/HITS.pool.root.1
[2025-06-05 06:29:02]  *** Contents of shared directory: ***
[2025-06-05 06:29:02] total 413376
[2025-06-05 06:29:02] -rw-r--r-- 2 boincer umatlas 223127848 Jun  5 02:21 ATLAS.root_0
[2025-06-05 06:29:02] -rw-r--r-- 2 boincer umatlas    508889 Jun  5 02:21 input.tar.gz
[2025-06-05 06:29:02] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 02:21 start_atlas.sh
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas 197942108 Jun  5 06:27 HITS.pool.root.1
[2025-06-05 06:29:02] -rw------- 1 boincer umatlas   1689600 Jun  5 06:29 result.tar.gz
06:29:04 (236576): run_atlas exited; CPU time 55513.005841
06:29:04 (236576): called boinc_finish(0)

</stderr_txt>
]]>

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