Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:16:01 (14704): wrapper (7.7.26015): starting
02:16:01 (14704): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:16:01] Arguments: --nthreads 8
[2025-06-05 02:16:01] Threads: 8
[2025-06-05 02:16:01] Checking for CVMFS
[2025-06-05 02:16:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:16:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:16:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:16:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:16:02] 2.11.2.0 2857 36749 97424 146809 3 1 15738343 20275201 1 130560 0 12835882 99.962 7333451 8542 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 02:16:02] CVMFS is ok
[2025-06-05 02:16:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:16:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:16:02] Further information can be found at the LHC@home message board.
[2025-06-05 02:16:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:16:02] Checking for apptainer binary...
[2025-06-05 02:16:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:16:02] Running /usr/bin/apptainer --version
[2025-06-05 02:16:02] apptainer version 1.3.2-1.el7
[2025-06-05 02:16:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:16:03] c-204-22.aglt2.org
[2025-06-05 02:16:03] apptainer works
[2025-06-05 02:16:03] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:16:03] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:16:04] Starting ATLAS job with PandaID=6667732234
[2025-06-05 02:16:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:59:42]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:59:42] 2025-06-05 08:59:27,968 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667732234/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:59:42] 2025-06-05 08:59:27,970 | INFO     | extracted standard info from prmon json
[2025-06-05 04:59:42] 2025-06-05 08:59:27,970 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:59:42] 2025-06-05 08:59:27,970 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:59:42] 2025-06-05 08:59:27,971 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:59:42] 2025-06-05 08:59:27,971 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:59:42] 2025-06-05 08:59:27,975 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:59:42] 2025-06-05 08:59:27,976 | INFO     | sum of square deviations: 1270051720.0
[2025-06-05 04:59:42] 2025-06-05 08:59:27,977 | INFO     | sum of deviations: -9727979819.000004
[2025-06-05 04:59:42] 2025-06-05 08:59:27,977 | INFO     | mean x: 1749109064.5
[2025-06-05 04:59:42] 2025-06-05 08:59:27,977 | INFO     | mean y: 2569128.075
[2025-06-05 04:59:42] 2025-06-05 08:59:27,978 | INFO     | -- intersect: 13399895719.377893
[2025-06-05 04:59:42] 2025-06-05 08:59:27,978 | INFO     | intersect: 13399895719.377893
[2025-06-05 04:59:42] 2025-06-05 08:59:27,978 | INFO     | chi2: 1.7842795329484242
[2025-06-05 04:59:42] 2025-06-05 08:59:27,979 | INFO     | sum of square deviations: 1154663510.0
[2025-06-05 04:59:42] 2025-06-05 08:59:27,980 | INFO     | sum of deviations: -8603332701.000006
[2025-06-05 04:59:42] 2025-06-05 08:59:27,980 | INFO     | mean x: 1749108912.0
[2025-06-05 04:59:42] 2025-06-05 08:59:27,980 | INFO     | mean y: 2570614.8645161293
[2025-06-05 04:59:42] 2025-06-05 08:59:27,980 | INFO     | -- intersect: 13035082485.115046
[2025-06-05 04:59:42] 2025-06-05 08:59:27,980 | INFO     | intersect: 13035082485.115046
[2025-06-05 04:59:42] 2025-06-05 08:59:27,981 | INFO     | chi2: 1.784988290642972
[2025-06-05 04:59:42] 2025-06-05 08:59:27,981 | INFO     | current chi2=1.784988290642972 (change=-0.039722346272532655 %)
[2025-06-05 04:59:42] 2025-06-05 08:59:27,981 | INFO     | right removable region: 154
[2025-06-05 04:59:42] 2025-06-05 08:59:27,981 | INFO     | sum of square deviations: 1154663510.0
[2025-06-05 04:59:42] 2025-06-05 08:59:27,982 | INFO     | sum of deviations: -35577327679.99999
[2025-06-05 04:59:42] 2025-06-05 08:59:27,982 | INFO     | mean x: 1749109217.0
[2025-06-05 04:59:42] 2025-06-05 08:59:27,982 | INFO     | mean y: 2602826.9870967744
[2025-06-05 04:59:42] 2025-06-05 08:59:27,982 | INFO     | -- intersect: 53895906999.487724
[2025-06-05 04:59:42] 2025-06-05 08:59:27,982 | INFO     | intersect: 53895906999.487724
[2025-06-05 04:59:42] 2025-06-05 08:59:27,983 | INFO     | chi2: 0.21511587833409054
[2025-06-05 04:59:42] 2025-06-05 08:59:27,983 | INFO     | current chi2=0.21511587833409054 (change=87.9438241395605 %)
[2025-06-05 04:59:42] 2025-06-05 08:59:27,983 | INFO     | sum of square deviations: 1046484737.5
[2025-06-05 04:59:42] 2025-06-05 08:59:27,984 | INFO     | sum of deviations: -39741248893.5
[2025-06-05 04:59:42] 2025-06-05 08:59:27,984 | INFO     | mean x: 1749109369.5
[2025-06-05 04:59:42] 2025-06-05 08:59:27,984 | INFO     | mean y: 2608696.553333333
[2025-06-05 04:59:42] 2025-06-05 08:59:27,984 | INFO     | -- intersect: 66426693352.87864
[2025-06-05 04:59:42] 2025-06-05 08:59:27,984 | INFO     | intersect: 66426693352.87864
[2025-06-05 04:59:42] 2025-06-05 08:59:27,985 | INFO     | chi2: 0.1387718860919629
[2025-06-05 04:59:42] 2025-06-05 08:59:27,985 | INFO     | current chi2=0.1387718860919629 (change=35.4897057499214 %)
[2025-06-05 04:59:42] 2025-06-05 08:59:27,985 | INFO     | sum of square deviations: 945282840.0
[2025-06-05 04:59:42] 2025-06-05 08:59:27,986 | INFO     | sum of deviations: -36818672494.99999
[2025-06-05 04:59:42] 2025-06-05 08:59:27,986 | INFO     | mean x: 1749109522.0
[2025-06-05 04:59:42] 2025-06-05 08:59:27,986 | INFO     | mean y: 2604276.1586206895
[2025-06-05 04:59:42] 2025-06-05 08:59:27,986 | INFO     | -- intersect: 68130245997.02598
[2025-06-05 04:59:42] 2025-06-05 08:59:27,986 | INFO     | intersect: 68130245997.02598
[2025-06-05 04:59:42] 2025-06-05 08:59:27,987 | INFO     | chi2: 0.13728363003618696
[2025-06-05 04:59:42] 2025-06-05 08:59:27,987 | INFO     | current chi2=0.13728363003618696 (change=1.072447811792137 %)
[2025-06-05 04:59:42] 2025-06-05 08:59:27,987 | INFO     | left removable region: 30
[2025-06-05 04:59:42] 2025-06-05 08:59:27,987 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 04:59:42] 2025-06-05 08:59:27,988 | INFO     | sum of deviations: -23466541918.5
[2025-06-05 04:59:42] 2025-06-05 08:59:27,988 | INFO     | mean x: 1749109796.5
[2025-06-05 04:59:42] 2025-06-05 08:59:27,988 | INFO     | mean y: 2586389.5725806453
[2025-06-05 04:59:42] 2025-06-05 08:59:27,988 | INFO     | -- intersect: 69433188950.66556
[2025-06-05 04:59:42] 2025-06-05 08:59:27,988 | INFO     | intersect: 69433188950.66556
[2025-06-05 04:59:42] 2025-06-05 08:59:27,988 | INFO     | chi2: 0.12767174004996695
[2025-06-05 04:59:42] 2025-06-05 08:59:27,989 | INFO     | -- intersect: 69433188950.66556
[2025-06-05 04:59:42] 2025-06-05 08:59:27,989 | INFO     | current memory leak: -39.69 B/s (using 124 data points, chi2=0.13)
[2025-06-05 04:59:42] 2025-06-05 08:59:27,989 | INFO     | ..............................
[2025-06-05 04:59:42] 2025-06-05 08:59:27,989 | INFO     | . Timing measurements:
[2025-06-05 04:59:42] 2025-06-05 08:59:27,989 | INFO     | . get job = 0 s
[2025-06-05 04:59:42] 2025-06-05 08:59:27,990 | INFO     | . initial setup = 2 s
[2025-06-05 04:59:42] 2025-06-05 08:59:27,990 | INFO     | . payload setup = 11 s
[2025-06-05 04:59:42] 2025-06-05 08:59:27,990 | INFO     | . stage-in = 0 s
[2025-06-05 04:59:42] 2025-06-05 08:59:27,990 | INFO     | . payload execution = 9747 s
[2025-06-05 04:59:42] 2025-06-05 08:59:27,990 | INFO     | . stage-out = 0 s
[2025-06-05 04:59:42] 2025-06-05 08:59:27,990 | INFO     | . log creation = 0 s
[2025-06-05 04:59:42] 2025-06-05 08:59:27,990 | INFO     | ..............................
[2025-06-05 04:59:42] 2025-06-05 08:59:28,086 | INFO     | 
[2025-06-05 04:59:42] 2025-06-05 08:59:28,086 | INFO     | job summary report
[2025-06-05 04:59:42] 2025-06-05 08:59:28,086 | INFO     | --------------------------------------------------
[2025-06-05 04:59:42] 2025-06-05 08:59:28,087 | INFO     | PanDA job id: 6667732234
[2025-06-05 04:59:42] 2025-06-05 08:59:28,087 | INFO     | task id: 44871837
[2025-06-05 04:59:42] 2025-06-05 08:59:28,087 | INFO     | errors: (none)
[2025-06-05 04:59:42] 2025-06-05 08:59:28,087 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:59:42] 2025-06-05 08:59:28,087 | INFO     | pilot state: finished 
[2025-06-05 04:59:42] 2025-06-05 08:59:28,088 | INFO     | transexitcode: 0
[2025-06-05 04:59:42] 2025-06-05 08:59:28,088 | INFO     | exeerrorcode: 0
[2025-06-05 04:59:42] 2025-06-05 08:59:28,088 | INFO     | exeerrordiag: 
[2025-06-05 04:59:42] 2025-06-05 08:59:28,088 | INFO     | exitcode: 0
[2025-06-05 04:59:42] 2025-06-05 08:59:28,088 | INFO     | exitmsg: OK
[2025-06-05 04:59:42] 2025-06-05 08:59:28,088 | INFO     | cpuconsumptiontime: 72217 s
[2025-06-05 04:59:42] 2025-06-05 08:59:28,089 | INFO     | nevents: 400
[2025-06-05 04:59:42] 2025-06-05 08:59:28,089 | INFO     | neventsw: 0
[2025-06-05 04:59:42] 2025-06-05 08:59:28,089 | INFO     | pid: 24754
[2025-06-05 04:59:42] 2025-06-05 08:59:28,089 | INFO     | pgrp: 24754
[2025-06-05 04:59:42] 2025-06-05 08:59:28,089 | INFO     | corecount: 8
[2025-06-05 04:59:42] 2025-06-05 08:59:28,089 | INFO     | event service: False
[2025-06-05 04:59:42] 2025-06-05 08:59:28,090 | INFO     | sizes: {0: 2397220, 1: 2397419, 7: 2397625, 12: 2397653, 9764: 2425892, 9765: 2435017, 9771: 2435131}
[2025-06-05 04:59:42] 2025-06-05 08:59:28,090 | INFO     | --------------------------------------------------
[2025-06-05 04:59:42] 2025-06-05 08:59:28,090 | INFO     | 
[2025-06-05 04:59:42] 2025-06-05 08:59:28,090 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 04:59:42] 2025-06-05 08:59:28,118 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,119 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,121 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,122 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,122 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,122 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:59:42] 2025-06-05 08:59:28,122 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,122 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:59:42] 2025-06-05 08:59:28,122 | INFO     | job 6667732234 has completed (purged errors)
[2025-06-05 04:59:42] 2025-06-05 08:59:28,123 | INFO     | overall cleanup function is called
[2025-06-05 04:59:42] 2025-06-05 08:59:29,128 | INFO     | --- collectZombieJob: --- 10, [24754]
[2025-06-05 04:59:42] 2025-06-05 08:59:29,128 | INFO     | zombie collector waiting for pid 24754
[2025-06-05 04:59:42] 2025-06-05 08:59:29,128 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:59:42] 2025-06-05 08:59:29,128 | INFO     | collected zombie processes
[2025-06-05 04:59:42] 2025-06-05 08:59:29,128 | INFO     | will attempt to kill all subprocesses of pid=24754
[2025-06-05 04:59:42] 2025-06-05 08:59:29,219 | INFO     | process IDs to be killed: [24754] (in reverse order)
[2025-06-05 04:59:42] 2025-06-05 08:59:29,282 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:59:42] 2025-06-05 08:59:29,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:59:42] 2025-06-05 08:59:29,288 | INFO     | did not find any defunct processes belonging to 24754
[2025-06-05 04:59:42] 2025-06-05 08:59:29,291 | INFO     | did not find any defunct processes belonging to 24754
[2025-06-05 04:59:42] 2025-06-05 08:59:29,291 | INFO     | ready for new job
[2025-06-05 04:59:42] 2025-06-05 08:59:29,291 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:59:42] 2025-06-05 08:59:29,293 | INFO     | **************************************
[2025-06-05 04:59:42] 2025-06-05 08:59:29,294 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:59:42] 2025-06-05 08:59:29,294 | INFO     | **************************************
[2025-06-05 04:59:42] 2025-06-05 08:59:29,294 | INFO     | 
[2025-06-05 04:59:42] 2025-06-05 08:59:29,294 | INFO     | architecture information:
[2025-06-05 04:59:42] 2025-06-05 08:59:29,295 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:59:42] 2025-06-05 08:59:29,313 | INFO     | cat /etc/os-release:
[2025-06-05 04:59:42] NAME="CentOS Linux"
[2025-06-05 04:59:42] VERSION="7 (Core)"
[2025-06-05 04:59:42] ID="centos"
[2025-06-05 04:59:42] ID_LIKE="rhel fedora"
[2025-06-05 04:59:42] VERSION_ID="7"
[2025-06-05 04:59:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:59:42] ANSI_COLOR="0;31"
[2025-06-05 04:59:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:59:42] HOME_URL="https://www.centos.org/"
[2025-06-05 04:59:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:59:42] 
[2025-06-05 04:59:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:59:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:59:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:59:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:59:42] 
[2025-06-05 04:59:42] 2025-06-05 08:59:29,313 | INFO     | **************************************
[2025-06-05 04:59:42] 2025-06-05 08:59:29,817 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 04:59:42] 2025-06-05 08:59:29,837 | INFO     | sufficient remaining disk space (18570280960 B)
[2025-06-05 04:59:42] 2025-06-05 08:59:29,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:59:42] 2025-06-05 08:59:29,838 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:59:42] 2025-06-05 08:59:29,838 | INFO     | update_server=False
[2025-06-05 04:59:42] 2025-06-05 08:59:29,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:59:42] 2025-06-05 08:59:29,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:59:42] 2025-06-05 08:59:29,839 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 04:59:42] 2025-06-05 08:59:29,840 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:59:42] 2025-06-05 08:59:29,840 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:59:42] 2025-06-05 08:59:29,840 | INFO     | aborting loop
[2025-06-05 04:59:42] 2025-06-05 08:59:29,841 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:59:42] 2025-06-05 08:59:29,841 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:59:42] 2025-06-05 08:59:29,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:59:42] 2025-06-05 08:59:30,080 | INFO     | all payload control threads have been joined
[2025-06-05 04:59:42] 2025-06-05 08:59:30,673 | INFO     | all data control threads have been joined
[2025-06-05 04:59:42] 2025-06-05 08:59:30,794 | INFO     | all job control threads have been joined
[2025-06-05 04:59:42] 2025-06-05 08:59:30,839 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:30,845 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:30,845 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:31,083 | INFO     | [payload] control thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:31,232 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:31,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:31,678 | INFO     | [data] control thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:31,799 | INFO     | [job] control thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:31,811 | INFO     | [job] validate thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:31,949 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:31,950 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:32,012 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:32,050 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:32,134 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:32,168 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:32,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:59:42] 2025-06-05 08:59:36,548 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:59:42] 2025-06-05 08:59:37,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809823696704)>', '<ExcThread(monitor, started 139808626173696)>']
[2025-06-05 04:59:42] 2025-06-05 08:59:37,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:59:42] 2025-06-05 08:59:37,872 | INFO     | [monitor] control thread has ended
[2025-06-05 04:59:42] 2025-06-05 08:59:42,128 | INFO     | all workflow threads have been joined
[2025-06-05 04:59:42] 2025-06-05 08:59:42,128 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:59:42] 2025-06-05 08:59:42,128 | INFO     | traces error code: 0
[2025-06-05 04:59:42] 2025-06-05 08:59:42,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:59:42] 2025-06-05 08:59:42,234 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:59:42] 2025-06-05 08:59:42,239 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:59:42] 2025-06-05 08:59:42,243 [wrapper] pilotpid: 18339
[2025-06-05 04:59:42] 2025-06-05 08:59:42,248 [wrapper] Pilot exit status: 0
[2025-06-05 04:59:42] 2025-06-05 08:59:42,265 [wrapper] pandaids: 6667732234
[2025-06-05 04:59:42] 2025-06-05 08:59:42,307 [wrapper] cleanup supervisor_pilot 22865 18340
[2025-06-05 04:59:42] 2025-06-05 08:59:42,312 [wrapper] Test setup, not cleaning
[2025-06-05 04:59:42] 2025-06-05 08:59:42,317 [wrapper] apfmon messages muted
[2025-06-05 04:59:42] 2025-06-05 08:59:42,322 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:59:42] 2025-06-05 08:59:42,326 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:59:42]  *** Error codes and diagnostics ***
[2025-06-05 04:59:42]     "exeErrorCode": 0,
[2025-06-05 04:59:42]     "exeErrorDiag": "",
[2025-06-05 04:59:42]     "pilotErrorCode": 0,
[2025-06-05 04:59:42]     "pilotErrorDiag": "",
[2025-06-05 04:59:42]  *** Listing of results directory ***
[2025-06-05 04:59:42] total 418340
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas    495897 May 27 19:30 pilot3.tar.gz
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas      5111 May 27 20:20 queuedata.json
[2025-06-05 04:59:42] -rwx------ 1 boincer umatlas     37140 May 27 20:23 runpilot2-wrapper.sh
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas       100 Jun  5 02:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:59:42] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 02:16 run_atlas
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas       105 Jun  5 02:16 job.xml
[2025-06-05 04:59:42] -rw-r--r-- 2 boincer umatlas 221190700 Jun  5 02:16 EVNT.44871834._002965.pool.root.1
[2025-06-05 04:59:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 02:16 start_atlas.sh
[2025-06-05 04:59:42] drwxrwx--x 2 boincer umatlas      4096 Jun  5 02:16 shared
[2025-06-05 04:59:42] -rw-r--r-- 2 boincer umatlas    508882 Jun  5 02:16 input.tar.gz
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas         0 Jun  5 02:16 boinc_lockfile
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas      2558 Jun  5 02:16 pandaJob.out
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas    986926 Jun  5 02:16 agis_schedconf.cvmfs.json
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas   1598969 Jun  5 02:16 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:59:42] drwx------ 4 boincer umatlas      4096 Jun  5 02:16 pilot3
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas      5905 Jun  5 04:54 init_data.xml
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas        95 Jun  5 04:58 pilot_heartbeat.json
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas 200900803 Jun  5 04:58 HITS.44871837._075668.pool.root.1
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas       530 Jun  5 04:59 boinc_task_state.xml
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas      1048 Jun  5 04:59 memory_monitor_summary.json
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas    345000 Jun  5 04:59 log.44871837._075668.job.log.tgz.1
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas      7749 Jun  5 04:59 heartbeat.json
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas        27 Jun  5 04:59 wrapper_checkpoint.txt
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 04:59 boinc_mmap_file
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas      4476 Jun  5 04:59 pilotlog.txt
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas    880736 Jun  5 04:59 log.44871837._075668.job.log.1
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas       357 Jun  5 04:59 output.list
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas       620 Jun  5 04:59 runtime_log
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas   1249280 Jun  5 04:59 result.tar.gz
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas       660 Jun  5 04:59 W6uNDmmkJe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmicSKDmFaT85m.diag
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas      8659 Jun  5 04:59 runtime_log.err
[2025-06-05 04:59:42] -rw-r--r-- 1 boincer umatlas     20811 Jun  5 04:59 stderr.txt
[2025-06-05 04:59:42] HITS file was successfully produced:
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas 200900803 Jun  5 04:58 shared/HITS.pool.root.1
[2025-06-05 04:59:42]  *** Contents of shared directory: ***
[2025-06-05 04:59:42] total 413944
[2025-06-05 04:59:42] -rw-r--r-- 2 boincer umatlas 221190700 Jun  5 02:16 ATLAS.root_0
[2025-06-05 04:59:42] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 02:16 start_atlas.sh
[2025-06-05 04:59:42] -rw-r--r-- 2 boincer umatlas    508882 Jun  5 02:16 input.tar.gz
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas 200900803 Jun  5 04:58 HITS.pool.root.1
[2025-06-05 04:59:42] -rw------- 1 boincer umatlas   1249280 Jun  5 04:59 result.tar.gz
04:59:44 (14704): run_atlas exited; CPU time 72163.041868
04:59:44 (14704): called boinc_finish(0)

</stderr_txt>
]]>

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