Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:09:21 (3813291): wrapper (7.7.26015): starting
02:09:21 (3813291): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:09:21] Arguments: --nthreads 8
[2025-06-05 02:09:21] Threads: 8
[2025-06-05 02:09:21] Checking for CVMFS
[2025-06-05 02:09:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:09:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:09:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:09:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:09:22] 2.12.6.0 4995 38373 584256 146807 0 621 25238678 32935936 31365 16776704 1 481941737 99.678 398262256 12803 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 02:09:22] CVMFS is ok
[2025-06-05 02:09:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 02:09:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 02:09:22] Further information can be found at the LHC@home message board.
[2025-06-05 02:09:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:09:22] Checking for apptainer binary...
[2025-06-05 02:09:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:09:22] Running /usr/bin/apptainer --version
[2025-06-05 02:09:22] apptainer version 1.4.1-1.el9
[2025-06-05 02:09:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:09:23] c7-6-31.aglt2.org
[2025-06-05 02:09:23] apptainer works
[2025-06-05 02:09:23] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:09:23] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:09:23] Starting ATLAS job with PandaID=6680435251
[2025-06-05 02:09:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:50:48]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:50:48] 2025-06-05 08:50:29,558 | INFO     | executing command: lscpu
[2025-06-05 04:50:48] 2025-06-05 08:50:29,641 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 04:50:48] 2025-06-05 08:50:30,067 | INFO     | monitor loop #684: job 0:6680435251 is in state 'finished'
[2025-06-05 04:50:48] 2025-06-05 08:50:30,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:50:48] 2025-06-05 08:50:32,570 | INFO     | monitor loop #685: job 0:6680435251 is in state 'finished'
[2025-06-05 04:50:48] 2025-06-05 08:50:32,570 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:50:48] 2025-06-05 08:50:35,073 | INFO     | monitor loop #686: job 0:6680435251 is in state 'finished'
[2025-06-05 04:50:48] 2025-06-05 08:50:35,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:50:48] 2025-06-05 08:50:35,184 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 04:50:48] 2025-06-05 08:50:35,185 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6680435251/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:50:48] 2025-06-05 08:50:35,186 | INFO     | extracted standard info from prmon json
[2025-06-05 04:50:48] 2025-06-05 08:50:35,186 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:50:48] 2025-06-05 08:50:35,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:50:48] 2025-06-05 08:50:35,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:50:48] 2025-06-05 08:50:35,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:50:48] 2025-06-05 08:50:35,189 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:50:48] 2025-06-05 08:50:35,189 | INFO     | sum of square deviations: 1199940638.0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,190 | INFO     | sum of deviations: 28171206965.0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,190 | INFO     | mean x: 1749108603.0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,190 | INFO     | mean y: 2299695.993630573
[2025-06-05 04:50:48] 2025-06-05 08:50:35,190 | INFO     | -- intersect: -41061815393.485504
[2025-06-05 04:50:48] 2025-06-05 08:50:35,190 | INFO     | intersect: -41061815393.485504
[2025-06-05 04:50:48] 2025-06-05 08:50:35,190 | INFO     | chi2: 1.5900104810531839
[2025-06-05 04:50:48] 2025-06-05 08:50:35,191 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,192 | INFO     | sum of deviations: 26956257978.5
[2025-06-05 04:50:48] 2025-06-05 08:50:35,192 | INFO     | mean x: 1749108450.5
[2025-06-05 04:50:48] 2025-06-05 08:50:35,192 | INFO     | mean y: 2298032.0592105263
[2025-06-05 04:50:48] 2025-06-05 08:50:35,193 | INFO     | -- intersect: -43297508113.42259
[2025-06-05 04:50:48] 2025-06-05 08:50:35,193 | INFO     | intersect: -43297508113.42259
[2025-06-05 04:50:48] 2025-06-05 08:50:35,193 | INFO     | chi2: 1.5908753320959808
[2025-06-05 04:50:48] 2025-06-05 08:50:35,193 | INFO     | current chi2=1.5908753320959808 (change=-0.05439278879621101 %)
[2025-06-05 04:50:48] 2025-06-05 08:50:35,193 | INFO     | right removable region: 151
[2025-06-05 04:50:48] 2025-06-05 08:50:35,193 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,194 | INFO     | sum of deviations: 2434777668.0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,194 | INFO     | mean x: 1749108755.5
[2025-06-05 04:50:48] 2025-06-05 08:50:35,194 | INFO     | mean y: 2334689.289473684
[2025-06-05 04:50:48] 2025-06-05 08:50:35,194 | INFO     | -- intersect: -3908646556.6735706
[2025-06-05 04:50:48] 2025-06-05 08:50:35,194 | INFO     | intersect: -3908646556.6735706
[2025-06-05 04:50:48] 2025-06-05 08:50:35,194 | INFO     | chi2: 0.027741518005725448
[2025-06-05 04:50:48] 2025-06-05 08:50:35,194 | INFO     | current chi2=0.027741518005725448 (change=98.25526194095588 %)
[2025-06-05 04:50:48] 2025-06-05 08:50:35,195 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,195 | INFO     | sum of deviations: 1192598067.9999998
[2025-06-05 04:50:48] 2025-06-05 08:50:35,195 | INFO     | mean x: 1749108908.0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,195 | INFO     | mean y: 2336503.299319728
[2025-06-05 04:50:48] 2025-06-05 08:50:35,195 | INFO     | -- intersect: -2115539956.2959888
[2025-06-05 04:50:48] 2025-06-05 08:50:35,195 | INFO     | intersect: -2115539956.2959888
[2025-06-05 04:50:48] 2025-06-05 08:50:35,196 | INFO     | chi2: 0.02534796306562957
[2025-06-05 04:50:48] 2025-06-05 08:50:35,196 | INFO     | current chi2=0.02534796306562957 (change=8.62806043851632 %)
[2025-06-05 04:50:48] 2025-06-05 08:50:35,196 | INFO     | left removable region: 20
[2025-06-05 04:50:48] 2025-06-05 08:50:35,196 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,200 | INFO     | sum of deviations: -1273597954.9999998
[2025-06-05 04:50:48] 2025-06-05 08:50:35,200 | INFO     | mean x: 1749109030.0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,200 | INFO     | mean y: 2339886.1984732826
[2025-06-05 04:50:48] 2025-06-05 08:50:35,200 | INFO     | -- intersect: 3198159308.464138
[2025-06-05 04:50:48] 2025-06-05 08:50:35,200 | INFO     | intersect: 3198159308.464138
[2025-06-05 04:50:48] 2025-06-05 08:50:35,200 | INFO     | chi2: 0.018005178751401625
[2025-06-05 04:50:48] 2025-06-05 08:50:35,200 | INFO     | -- intersect: 3198159308.464138
[2025-06-05 04:50:48] 2025-06-05 08:50:35,200 | INFO     | current memory leak: -1.83 B/s (using 131 data points, chi2=0.02)
[2025-06-05 04:50:48] 2025-06-05 08:50:35,201 | INFO     | ..............................
[2025-06-05 04:50:48] 2025-06-05 08:50:35,201 | INFO     | . Timing measurements:
[2025-06-05 04:50:48] 2025-06-05 08:50:35,201 | INFO     | . get job = 0 s
[2025-06-05 04:50:48] 2025-06-05 08:50:35,201 | INFO     | . initial setup = 3 s
[2025-06-05 04:50:48] 2025-06-05 08:50:35,201 | INFO     | . payload setup = 15 s
[2025-06-05 04:50:48] 2025-06-05 08:50:35,201 | INFO     | . stage-in = 0 s
[2025-06-05 04:50:48] 2025-06-05 08:50:35,202 | INFO     | . payload execution = 9588 s
[2025-06-05 04:50:48] 2025-06-05 08:50:35,202 | INFO     | . stage-out = 0 s
[2025-06-05 04:50:48] 2025-06-05 08:50:35,202 | INFO     | . log creation = 0 s
[2025-06-05 04:50:48] 2025-06-05 08:50:35,202 | INFO     | ..............................
[2025-06-05 04:50:48] 2025-06-05 08:50:35,381 | INFO     | 
[2025-06-05 04:50:48] 2025-06-05 08:50:35,381 | INFO     | job summary report
[2025-06-05 04:50:48] 2025-06-05 08:50:35,381 | INFO     | --------------------------------------------------
[2025-06-05 04:50:48] 2025-06-05 08:50:35,381 | INFO     | PanDA job id: 6680435251
[2025-06-05 04:50:48] 2025-06-05 08:50:35,381 | INFO     | task id: 45006595
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | errors: (none)
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | pilot state: finished 
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | transexitcode: 0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | exeerrorcode: 0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | exeerrordiag: 
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | exitcode: 0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | exitmsg: OK
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | cpuconsumptiontime: 27847 s
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | nevents: 400
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | neventsw: 0
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | pid: 3862152
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | pgrp: 3862152
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | corecount: 8
[2025-06-05 04:50:48] 2025-06-05 08:50:35,382 | INFO     | event service: False
[2025-06-05 04:50:48] 2025-06-05 08:50:35,383 | INFO     | sizes: {0: 2397070, 1: 2397269, 12: 2397475, 22: 2397503, 9606: 2425868, 9607: 2425867, 9608: 2435048, 9616: 2435162}
[2025-06-05 04:50:48] 2025-06-05 08:50:35,383 | INFO     | --------------------------------------------------
[2025-06-05 04:50:48] 2025-06-05 08:50:35,383 | INFO     | 
[2025-06-05 04:50:48] 2025-06-05 08:50:35,383 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-05 04:50:48] 2025-06-05 08:50:35,407 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,409 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,409 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,409 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:50:48] 2025-06-05 08:50:35,409 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,409 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:50:48] 2025-06-05 08:50:35,409 | INFO     | job 6680435251 has completed (purged errors)
[2025-06-05 04:50:48] 2025-06-05 08:50:35,409 | INFO     | overall cleanup function is called
[2025-06-05 04:50:48] 2025-06-05 08:50:36,421 | INFO     | --- collectZombieJob: --- 10, [3862152]
[2025-06-05 04:50:48] 2025-06-05 08:50:36,421 | INFO     | zombie collector waiting for pid 3862152
[2025-06-05 04:50:48] 2025-06-05 08:50:36,421 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:50:48] 2025-06-05 08:50:36,421 | INFO     | collected zombie processes
[2025-06-05 04:50:48] 2025-06-05 08:50:36,422 | INFO     | will attempt to kill all subprocesses of pid=3862152
[2025-06-05 04:50:48] 2025-06-05 08:50:36,907 | INFO     | process IDs to be killed: [3862152] (in reverse order)
[2025-06-05 04:50:48] 2025-06-05 08:50:37,084 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:50:48] 2025-06-05 08:50:37,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:50:48] 2025-06-05 08:50:37,110 | INFO     | did not find any defunct processes belonging to 3862152
[2025-06-05 04:50:48] 2025-06-05 08:50:37,130 | INFO     | did not find any defunct processes belonging to 3862152
[2025-06-05 04:50:48] 2025-06-05 08:50:37,130 | INFO     | ready for new job
[2025-06-05 04:50:48] 2025-06-05 08:50:37,130 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:50:48] 2025-06-05 08:50:37,132 | INFO     | **************************************
[2025-06-05 04:50:48] 2025-06-05 08:50:37,132 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:50:48] 2025-06-05 08:50:37,132 | INFO     | **************************************
[2025-06-05 04:50:48] 2025-06-05 08:50:37,132 | INFO     | 
[2025-06-05 04:50:48] 2025-06-05 08:50:37,151 | INFO     | architecture information:
[2025-06-05 04:50:48] 2025-06-05 08:50:37,151 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:50:48] 2025-06-05 08:50:37,168 | INFO     | cat /etc/os-release:
[2025-06-05 04:50:48] NAME="CentOS Linux"
[2025-06-05 04:50:48] VERSION="7 (Core)"
[2025-06-05 04:50:48] ID="centos"
[2025-06-05 04:50:48] ID_LIKE="rhel fedora"
[2025-06-05 04:50:48] VERSION_ID="7"
[2025-06-05 04:50:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:50:48] ANSI_COLOR="0;31"
[2025-06-05 04:50:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:50:48] HOME_URL="https://www.centos.org/"
[2025-06-05 04:50:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:50:48] 
[2025-06-05 04:50:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:50:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:50:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:50:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:50:48] 
[2025-06-05 04:50:48] 2025-06-05 08:50:37,169 | INFO     | **************************************
[2025-06-05 04:50:48] 2025-06-05 08:50:37,672 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-05 04:50:48] 2025-06-05 08:50:37,709 | INFO     | sufficient remaining disk space (76227280896 B)
[2025-06-05 04:50:48] 2025-06-05 08:50:37,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:50:48] 2025-06-05 08:50:37,710 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:50:48] 2025-06-05 08:50:37,710 | INFO     | update_server=False
[2025-06-05 04:50:48] 2025-06-05 08:50:37,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:50:48] 2025-06-05 08:50:37,760 | INFO     | all payload control threads have been joined
[2025-06-05 04:50:48] 2025-06-05 08:50:37,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:50:48] 2025-06-05 08:50:38,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:50:48] 2025-06-05 08:50:38,406 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:50:48] 2025-06-05 08:50:38,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:50:48] 2025-06-05 08:50:38,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:50:48] 2025-06-05 08:50:38,457 | INFO     | all data control threads have been joined
[2025-06-05 04:50:48] 2025-06-05 08:50:38,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:50:48] 2025-06-05 08:50:38,583 | INFO     | aborting loop
[2025-06-05 04:50:48] 2025-06-05 08:50:38,716 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:38,732 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:38,765 | INFO     | [payload] control thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:38,909 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:38,921 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:39,110 | INFO     | all job control threads have been joined
[2025-06-05 04:50:48] 2025-06-05 08:50:39,391 | INFO     | [job] validate thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:39,456 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:39,462 | INFO     | [data] control thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:39,587 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:39,610 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:39,704 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:39,757 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:40,001 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:40,119 | INFO     | [job] control thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:40,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:50:48] 2025-06-05 08:50:41,295 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:42,082 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:50:48] 2025-06-05 08:50:43,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140189875177280)>', '<ExcThread(monitor, started 140189527693056)>']
[2025-06-05 04:50:48] 2025-06-05 08:50:43,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:50:48] 2025-06-05 08:50:43,433 | INFO     | [monitor] control thread has ended
[2025-06-05 04:50:48] 2025-06-05 08:50:48,361 | INFO     | all workflow threads have been joined
[2025-06-05 04:50:48] 2025-06-05 08:50:48,361 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:50:48] 2025-06-05 08:50:48,362 | INFO     | traces error code: 0
[2025-06-05 04:50:48] 2025-06-05 08:50:48,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:50:48] 2025-06-05 08:50:48,526 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:50:48] 2025-06-05 08:50:48,537 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:50:48] 2025-06-05 08:50:48,542 [wrapper] pilotpid: 3831910
[2025-06-05 04:50:48] 2025-06-05 08:50:48,547 [wrapper] Pilot exit status: 0
[2025-06-05 04:50:48] 2025-06-05 08:50:48,559 [wrapper] pandaids: 6680435251
[2025-06-05 04:50:48] 2025-06-05 08:50:48,672 [wrapper] cleanup supervisor_pilot 1798154 3831911
[2025-06-05 04:50:48] 2025-06-05 08:50:48,675 [wrapper] Test setup, not cleaning
[2025-06-05 04:50:48] 2025-06-05 08:50:48,679 [wrapper] apfmon messages muted
[2025-06-05 04:50:48] 2025-06-05 08:50:48,683 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:50:48] 2025-06-05 08:50:48,686 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:50:48]  *** Error codes and diagnostics ***
[2025-06-05 04:50:48]     "exeErrorCode": 0,
[2025-06-05 04:50:48]     "exeErrorDiag": "",
[2025-06-05 04:50:48]     "pilotErrorCode": 0,
[2025-06-05 04:50:48]     "pilotErrorDiag": "",
[2025-06-05 04:50:48]  *** Listing of results directory ***
[2025-06-05 04:50:48] total 386372
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas    495897 Jun  5 01:37 pilot3.tar.gz
[2025-06-05 04:50:48] -rwx------. 1 boincer umatlas     37140 Jun  5 02:08 runpilot2-wrapper.sh
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas      5111 Jun  5 02:08 queuedata.json
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas       100 Jun  5 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:50:48] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 02:09 run_atlas
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas       105 Jun  5 02:09 job.xml
[2025-06-05 04:50:48] -rw-r--r--. 2 boincer umatlas 214118928 Jun  5 02:09 EVNT.45006593._002107.pool.root.1
[2025-06-05 04:50:48] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 02:09 start_atlas.sh
[2025-06-05 04:50:48] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 02:09 shared
[2025-06-05 04:50:48] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 02:09 input.tar.gz
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas         0 Jun  5 02:09 boinc_lockfile
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas      2524 Jun  5 02:09 pandaJob.out
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas    987109 Jun  5 02:09 agis_schedconf.cvmfs.json
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas   1598969 Jun  5 02:09 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:50:48] drwx------. 4 boincer umatlas      4096 Jun  5 02:09 pilot3
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas      6932 Jun  5 04:49 init_data.xml
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas 175222557 Jun  5 04:49 HITS.45006595._057067.pool.root.1
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas       529 Jun  5 04:50 boinc_task_state.xml
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas        95 Jun  5 04:50 pilot_heartbeat.json
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas      1045 Jun  5 04:50 memory_monitor_summary.json
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas    356633 Jun  5 04:50 log.45006595._057067.job.log.tgz.1
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas      7697 Jun  5 04:50 heartbeat.json
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas        27 Jun  5 04:50 wrapper_checkpoint.txt
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 04:50 boinc_mmap_file
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas      4353 Jun  5 04:50 pilotlog.txt
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas    881747 Jun  5 04:50 log.45006595._057067.job.log.1
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas       357 Jun  5 04:50 output.list
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas       620 Jun  5 04:50 runtime_log
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas   1259520 Jun  5 04:50 result.tar.gz
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 04:50 runtime_log.err
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas       655 Jun  5 04:50 D7NLDmExIh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm94nKDmhB0Tln.diag
[2025-06-05 04:50:48] -rw-r--r--. 1 boincer umatlas     14268 Jun  5 04:50 stderr.txt
[2025-06-05 04:50:48] HITS file was successfully produced:
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas 175222557 Jun  5 04:49 shared/HITS.pool.root.1
[2025-06-05 04:50:48]  *** Contents of shared directory: ***
[2025-06-05 04:50:48] total 381972
[2025-06-05 04:50:48] -rw-r--r--. 2 boincer umatlas 214118928 Jun  5 02:09 ATLAS.root_0
[2025-06-05 04:50:48] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 02:09 start_atlas.sh
[2025-06-05 04:50:48] -rw-r--r--. 2 boincer umatlas    508880 Jun  5 02:09 input.tar.gz
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas 175222557 Jun  5 04:49 HITS.pool.root.1
[2025-06-05 04:50:48] -rw-------. 1 boincer umatlas   1259520 Jun  5 04:50 result.tar.gz
04:50:50 (3813291): run_atlas exited; CPU time 28207.013929
04:50:50 (3813291): called boinc_finish(0)

</stderr_txt>
]]>

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