Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:10:34 (3718): wrapper (7.7.26015): starting
17:10:34 (3718): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 17:10:34] Arguments: --nthreads 8
[2025-06-05 17:10:34] Threads: 8
[2025-06-05 17:10:34] Checking for CVMFS
[2025-06-05 17:10:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 17:10:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 17:10:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 17:10:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 17:10:36] 2.11.2.0 8450 34823 94760 146822 2 59 17750775 25165824 3906 130560 0 18498430 99.781 20733119 2033 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 17:10:36] CVMFS is ok
[2025-06-05 17:10:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 17:10:36] Checking for apptainer binary...
[2025-06-05 17:10:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 17:10:36] Running /usr/bin/apptainer --version
[2025-06-05 17:10:36] apptainer version 1.3.2-1.el7
[2025-06-05 17:10:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 17:41:01] cg-vwn262.simple-grid.lan
[2025-06-05 17:41:01] apptainer works
[2025-06-05 17:41:01] Set ATHENA_PROC_NUMBER=8
[2025-06-05 17:41:01] Set ATHENA_CORE_NUMBER=8
[2025-06-05 17:41:01] Starting ATLAS job with PandaID=6678313251
[2025-06-05 17:41:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:30:45]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:30:45] 2025-06-05 19:30:28,720 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6678313251/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 21:30:45] 2025-06-05 19:30:28,721 | INFO     | extracted standard info from prmon json
[2025-06-05 21:30:45] 2025-06-05 19:30:28,721 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 21:30:45] 2025-06-05 19:30:28,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 21:30:45] 2025-06-05 19:30:28,721 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:30:45] 2025-06-05 19:30:28,722 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:30:45] 2025-06-05 19:30:28,726 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:30:45] 2025-06-05 19:30:28,727 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,728 | INFO     | sum of deviations: 62584362393.99998
[2025-06-05 21:30:45] 2025-06-05 19:30:28,729 | INFO     | mean x: 1749145249.0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,729 | INFO     | mean y: 2434394.9348837207
[2025-06-05 21:30:45] 2025-06-05 19:30:28,729 | INFO     | -- intersect: -35520374417.13228
[2025-06-05 21:30:45] 2025-06-05 19:30:28,729 | INFO     | intersect: -35520374417.13228
[2025-06-05 21:30:45] 2025-06-05 19:30:28,730 | INFO     | chi2: 7.455348942332386
[2025-06-05 21:30:45] 2025-06-05 19:30:28,730 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 21:30:45] 2025-06-05 19:30:28,732 | INFO     | sum of deviations: 75817562216.00008
[2025-06-05 21:30:45] 2025-06-05 19:30:28,732 | INFO     | mean x: 1749145096.5
[2025-06-05 21:30:45] 2025-06-05 19:30:28,732 | INFO     | mean y: 2443801.6285714284
[2025-06-05 21:30:45] 2025-06-05 19:30:28,732 | INFO     | -- intersect: -46179179357.18638
[2025-06-05 21:30:45] 2025-06-05 19:30:28,732 | INFO     | intersect: -46179179357.18638
[2025-06-05 21:30:45] 2025-06-05 19:30:28,733 | INFO     | chi2: 6.705616578796354
[2025-06-05 21:30:45] 2025-06-05 19:30:28,733 | INFO     | current chi2=6.705616578796354 (change=10.056301446589037 %)
[2025-06-05 21:30:45] 2025-06-05 19:30:28,733 | INFO     | right removable region: 209
[2025-06-05 21:30:45] 2025-06-05 19:30:28,733 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 21:30:45] 2025-06-05 19:30:28,735 | INFO     | sum of deviations: -12222128390.500008
[2025-06-05 21:30:45] 2025-06-05 19:30:28,735 | INFO     | mean x: 1749145401.5
[2025-06-05 21:30:45] 2025-06-05 19:30:28,735 | INFO     | mean y: 2488665.261904762
[2025-06-05 21:30:45] 2025-06-05 19:30:28,735 | INFO     | -- intersect: 7447173108.45444
[2025-06-05 21:30:45] 2025-06-05 19:30:28,735 | INFO     | intersect: 7447173108.45444
[2025-06-05 21:30:45] 2025-06-05 19:30:28,736 | INFO     | chi2: 2.46134644671441
[2025-06-05 21:30:45] 2025-06-05 19:30:28,736 | INFO     | current chi2=2.46134644671441 (change=66.98549637645284 %)
[2025-06-05 21:30:45] 2025-06-05 19:30:28,736 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,738 | INFO     | sum of deviations: -48344811167.99999
[2025-06-05 21:30:45] 2025-06-05 19:30:28,738 | INFO     | mean x: 1749145554.0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,738 | INFO     | mean y: 2515979.775609756
[2025-06-05 21:30:45] 2025-06-05 19:30:28,738 | INFO     | -- intersect: 31657795002.872246
[2025-06-05 21:30:45] 2025-06-05 19:30:28,738 | INFO     | intersect: 31657795002.872246
[2025-06-05 21:30:45] 2025-06-05 19:30:28,739 | INFO     | chi2: 1.0503192655651878
[2025-06-05 21:30:45] 2025-06-05 19:30:28,739 | INFO     | current chi2=1.0503192655651878 (change=57.327451120616004 %)
[2025-06-05 21:30:45] 2025-06-05 19:30:28,739 | INFO     | sum of square deviations: 2480604650.0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,741 | INFO     | sum of deviations: -48798675232.5
[2025-06-05 21:30:45] 2025-06-05 19:30:28,741 | INFO     | mean x: 1749145706.5
[2025-06-05 21:30:45] 2025-06-05 19:30:28,741 | INFO     | mean y: 2516300.325
[2025-06-05 21:30:45] 2025-06-05 19:30:28,741 | INFO     | -- intersect: 34411866160.17278
[2025-06-05 21:30:45] 2025-06-05 19:30:28,741 | INFO     | intersect: 34411866160.17278
[2025-06-05 21:30:45] 2025-06-05 19:30:28,742 | INFO     | chi2: 1.0294138781670084
[2025-06-05 21:30:45] 2025-06-05 19:30:28,742 | INFO     | current chi2=1.0294138781670084 (change=1.9903840749726776 %)
[2025-06-05 21:30:45] 2025-06-05 19:30:28,742 | INFO     | left removable region: 30
[2025-06-05 21:30:45] 2025-06-05 19:30:28,742 | INFO     | sum of square deviations: 1778377530.0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,743 | INFO     | sum of deviations: -14499863418.999998
[2025-06-05 21:30:45] 2025-06-05 19:30:28,743 | INFO     | mean x: 1749145981.0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,743 | INFO     | mean y: 2510408.217877095
[2025-06-05 21:30:45] 2025-06-05 19:30:28,744 | INFO     | -- intersect: 14264036657.030052
[2025-06-05 21:30:45] 2025-06-05 19:30:28,744 | INFO     | intersect: 14264036657.030052
[2025-06-05 21:30:45] 2025-06-05 19:30:28,744 | INFO     | chi2: 0.11780475619202432
[2025-06-05 21:30:45] 2025-06-05 19:30:28,744 | INFO     | -- intersect: 14264036657.030052
[2025-06-05 21:30:45] 2025-06-05 19:30:28,744 | INFO     | current memory leak: -8.15 B/s (using 179 data points, chi2=0.12)
[2025-06-05 21:30:45] 2025-06-05 19:30:28,745 | INFO     | ..............................
[2025-06-05 21:30:45] 2025-06-05 19:30:28,745 | INFO     | . Timing measurements:
[2025-06-05 21:30:45] 2025-06-05 19:30:28,746 | INFO     | . get job = 0 s
[2025-06-05 21:30:45] 2025-06-05 19:30:28,746 | INFO     | . initial setup = 6 s
[2025-06-05 21:30:45] 2025-06-05 19:30:28,746 | INFO     | . payload setup = 138 s
[2025-06-05 21:30:45] 2025-06-05 19:30:28,746 | INFO     | . stage-in = 0 s
[2025-06-05 21:30:45] 2025-06-05 19:30:28,746 | INFO     | . payload execution = 13240 s
[2025-06-05 21:30:45] 2025-06-05 19:30:28,746 | INFO     | . stage-out = 3 s
[2025-06-05 21:30:45] 2025-06-05 19:30:28,746 | INFO     | . log creation = 1 s
[2025-06-05 21:30:45] 2025-06-05 19:30:28,746 | INFO     | ..............................
[2025-06-05 21:30:45] 2025-06-05 19:30:28,876 | INFO     | 
[2025-06-05 21:30:45] 2025-06-05 19:30:28,877 | INFO     | job summary report
[2025-06-05 21:30:45] 2025-06-05 19:30:28,877 | INFO     | --------------------------------------------------
[2025-06-05 21:30:45] 2025-06-05 19:30:28,877 | INFO     | PanDA job id: 6678313251
[2025-06-05 21:30:45] 2025-06-05 19:30:28,877 | INFO     | task id: 45006595
[2025-06-05 21:30:45] 2025-06-05 19:30:28,877 | INFO     | errors: (none)
[2025-06-05 21:30:45] 2025-06-05 19:30:28,877 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:30:45] 2025-06-05 19:30:28,877 | INFO     | pilot state: finished 
[2025-06-05 21:30:45] 2025-06-05 19:30:28,878 | INFO     | transexitcode: 0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,878 | INFO     | exeerrorcode: 0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,878 | INFO     | exeerrordiag: 
[2025-06-05 21:30:45] 2025-06-05 19:30:28,878 | INFO     | exitcode: 0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,878 | INFO     | exitmsg: OK
[2025-06-05 21:30:45] 2025-06-05 19:30:28,878 | INFO     | cpuconsumptiontime: 49230 s
[2025-06-05 21:30:45] 2025-06-05 19:30:28,878 | INFO     | nevents: 400
[2025-06-05 21:30:45] 2025-06-05 19:30:28,878 | INFO     | neventsw: 0
[2025-06-05 21:30:45] 2025-06-05 19:30:28,878 | INFO     | pid: 499
[2025-06-05 21:30:45] 2025-06-05 19:30:28,878 | INFO     | pgrp: 499
[2025-06-05 21:30:45] 2025-06-05 19:30:28,879 | INFO     | corecount: 8
[2025-06-05 21:30:45] 2025-06-05 19:30:28,879 | INFO     | event service: False
[2025-06-05 21:30:45] 2025-06-05 19:30:28,879 | INFO     | sizes: {0: 2397172, 1: 2397371, 12: 2397371, 23: 2397399, 33: 2397427, 44: 2397483, 55: 2397639, 65: 2397667, 76: 2397695, 87: 2397751, 88: 2397985, 98: 2398293, 1
[2025-06-05 21:30:45] 2025-06-05 19:30:28,879 | INFO     | --------------------------------------------------
[2025-06-05 21:30:45] 2025-06-05 19:30:28,879 | INFO     | 
[2025-06-05 21:30:45] 2025-06-05 19:30:28,879 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-05 21:30:45] 2025-06-05 19:30:28,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,926 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,926 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,927 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:30:45] 2025-06-05 19:30:28,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,928 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:30:45] 2025-06-05 19:30:28,928 | INFO     | job 6678313251 has completed (purged errors)
[2025-06-05 21:30:45] 2025-06-05 19:30:28,928 | INFO     | overall cleanup function is called
[2025-06-05 21:30:45] 2025-06-05 19:30:29,938 | INFO     | --- collectZombieJob: --- 10, [499]
[2025-06-05 21:30:45] 2025-06-05 19:30:29,938 | INFO     | zombie collector waiting for pid 499
[2025-06-05 21:30:45] 2025-06-05 19:30:29,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:30:45] 2025-06-05 19:30:29,938 | INFO     | collected zombie processes
[2025-06-05 21:30:45] 2025-06-05 19:30:29,938 | INFO     | will attempt to kill all subprocesses of pid=499
[2025-06-05 21:30:45] 2025-06-05 19:30:30,043 | INFO     | process IDs to be killed: [499] (in reverse order)
[2025-06-05 21:30:45] 2025-06-05 19:30:30,360 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:30:45] 2025-06-05 19:30:30,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:30:45] 2025-06-05 19:30:30,365 | INFO     | did not find any defunct processes belonging to 499
[2025-06-05 21:30:45] 2025-06-05 19:30:30,368 | INFO     | did not find any defunct processes belonging to 499
[2025-06-05 21:30:45] 2025-06-05 19:30:30,369 | INFO     | ready for new job
[2025-06-05 21:30:45] 2025-06-05 19:30:30,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:30:45] 2025-06-05 19:30:30,371 | INFO     | **************************************
[2025-06-05 21:30:45] 2025-06-05 19:30:30,372 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:30:45] 2025-06-05 19:30:30,372 | INFO     | **************************************
[2025-06-05 21:30:45] 2025-06-05 19:30:30,372 | INFO     | 
[2025-06-05 21:30:45] 2025-06-05 19:30:30,373 | INFO     | pilot is running in a VM
[2025-06-05 21:30:45] 2025-06-05 19:30:30,373 | INFO     | architecture information:
[2025-06-05 21:30:45] 2025-06-05 19:30:30,373 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:30:45] 2025-06-05 19:30:30,411 | INFO     | cat /etc/os-release:
[2025-06-05 21:30:45] NAME="CentOS Linux"
[2025-06-05 21:30:45] VERSION="7 (Core)"
[2025-06-05 21:30:45] ID="centos"
[2025-06-05 21:30:45] ID_LIKE="rhel fedora"
[2025-06-05 21:30:45] VERSION_ID="7"
[2025-06-05 21:30:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:30:45] ANSI_COLOR="0;31"
[2025-06-05 21:30:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:30:45] HOME_URL="https://www.centos.org/"
[2025-06-05 21:30:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:30:45] 
[2025-06-05 21:30:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:30:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:30:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:30:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:30:45] 
[2025-06-05 21:30:45] 2025-06-05 19:30:30,411 | INFO     | **************************************
[2025-06-05 21:30:45] 2025-06-05 19:30:30,915 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-05 21:30:45] 2025-06-05 19:30:30,974 | INFO     | sufficient remaining disk space (496990420992 B)
[2025-06-05 21:30:45] 2025-06-05 19:30:30,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:30:45] 2025-06-05 19:30:30,975 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:30:45] 2025-06-05 19:30:30,975 | INFO     | update_server=False
[2025-06-05 21:30:45] 2025-06-05 19:30:30,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:30:45] 2025-06-05 19:30:30,975 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:30:45] 2025-06-05 19:30:30,991 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:30:45] 2025-06-05 19:30:30,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:30:45] 2025-06-05 19:30:30,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:30:45] 2025-06-05 19:30:31,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:30:45] 2025-06-05 19:30:31,175 | INFO     | aborting loop
[2025-06-05 21:30:45] 2025-06-05 19:30:31,588 | INFO     | all data control threads have been joined
[2025-06-05 21:30:45] 2025-06-05 19:30:31,981 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:32,081 | INFO     | all payload control threads have been joined
[2025-06-05 21:30:45] 2025-06-05 19:30:32,112 | INFO     | all job control threads have been joined
[2025-06-05 21:30:45] 2025-06-05 19:30:32,180 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:32,194 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:32,571 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:32,593 | INFO     | [data] control thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:32,809 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:32,917 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:32,983 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:33,087 | INFO     | [payload] control thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:33,117 | INFO     | [job] control thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:33,195 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:33,197 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:33,354 | INFO     | [job] validate thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:33,484 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:33,730 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:30:45] 2025-06-05 19:30:33,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:30:45] 2025-06-05 19:30:34,896 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:37,740 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:30:45] 2025-06-05 19:30:39,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313579251520)>', '<ExcThread(monitor, started 140313125435136)>']
[2025-06-05 21:30:45] 2025-06-05 19:30:40,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:30:45] 2025-06-05 19:30:40,032 | INFO     | [monitor] control thread has ended
[2025-06-05 21:30:45] 2025-06-05 19:30:44,317 | INFO     | all workflow threads have been joined
[2025-06-05 21:30:45] 2025-06-05 19:30:44,317 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:30:45] 2025-06-05 19:30:44,317 | INFO     | traces error code: 0
[2025-06-05 21:30:45] 2025-06-05 19:30:44,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:30:45] 2025-06-05 19:30:44,630 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:30:45] 2025-06-05 19:30:44,649 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:30:45] 2025-06-05 19:30:44,672 [wrapper] pilotpid: 24416
[2025-06-05 21:30:45] 2025-06-05 19:30:44,690 [wrapper] Pilot exit status: 0
[2025-06-05 21:30:45] 2025-06-05 19:30:44,733 [wrapper] pandaids: 6678313251
[2025-06-05 21:30:45] 2025-06-05 19:30:44,774 [wrapper] cleanup supervisor_pilot  9016 24417
[2025-06-05 21:30:45] 2025-06-05 19:30:44,779 [wrapper] Test setup, not cleaning
[2025-06-05 21:30:45] 2025-06-05 19:30:44,783 [wrapper] apfmon messages muted
[2025-06-05 21:30:45] 2025-06-05 19:30:44,787 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:30:45] 2025-06-05 19:30:44,805 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:30:45]  *** Error codes and diagnostics ***
[2025-06-05 21:30:45]     "exeErrorCode": 0,
[2025-06-05 21:30:45]     "exeErrorDiag": "",
[2025-06-05 21:30:45]     "pilotErrorCode": 0,
[2025-06-05 21:30:45]     "pilotErrorDiag": "",
[2025-06-05 21:30:45]  *** Listing of results directory ***
[2025-06-05 21:30:45] total 391616
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:04 pilot3.tar.gz
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc      5111 Jun  4 06:20 queuedata.json
[2025-06-05 21:30:45] -rwx------. 1 boinc boinc     37140 Jun  4 06:21 runpilot2-wrapper.sh
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc       100 Jun  5 17:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:30:45] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 17:10 run_atlas
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc       105 Jun  5 17:10 job.xml
[2025-06-05 21:30:45] -rw-r--r--. 2 boinc boinc 215803542 Jun  5 17:10 EVNT.45006593._002096.pool.root.1
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc      6392 Jun  5 17:10 init_data.xml
[2025-06-05 21:30:45] -rw-r--r--. 2 boinc boinc     15093 Jun  5 17:10 start_atlas.sh
[2025-06-05 21:30:45] drwxrwx--x. 2 boinc boinc        68 Jun  5 17:10 shared
[2025-06-05 21:30:45] -rw-r--r--. 2 boinc boinc    508880 Jun  5 17:10 input.tar.gz
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc         0 Jun  5 17:10 boinc_lockfile
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc      2525 Jun  5 17:41 pandaJob.out
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc    983229 Jun  5 17:44 agis_schedconf.cvmfs.json
[2025-06-05 21:30:45] drwx------. 4 boinc boinc      4096 Jun  5 17:44 pilot3
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc 178297322 Jun  5 21:29 HITS.45006595._052345.pool.root.1
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc       531 Jun  5 21:29 boinc_task_state.xml
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc      1012 Jun  5 21:30 memory_monitor_summary.json
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc   1598969 Jun  5 21:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc    387200 Jun  5 21:30 log.45006595._052345.job.log.tgz.1
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc      8192 Jun  5 21:30 boinc_mmap_file
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc        28 Jun  5 21:30 wrapper_checkpoint.txt
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc        95 Jun  5 21:30 pilot_heartbeat.json
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc      7690 Jun  5 21:30 heartbeat.json
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc      4417 Jun  5 21:30 pilotlog.txt
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc   1160339 Jun  5 21:30 log.45006595._052345.job.log.1
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc       357 Jun  5 21:30 output.list
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc       620 Jun  5 21:30 runtime_log
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc   1566720 Jun  5 21:30 result.tar.gz
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc      8673 Jun  5 21:30 runtime_log.err
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc       657 Jun  5 21:30 lNbKDmknug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaCnKDm5NzbQm.diag
[2025-06-05 21:30:45] -rw-r--r--. 1 boinc boinc     20507 Jun  5 21:30 stderr.txt
[2025-06-05 21:30:45] HITS file was successfully produced:
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc 178297322 Jun  5 21:29 shared/HITS.pool.root.1
[2025-06-05 21:30:45]  *** Contents of shared directory: ***
[2025-06-05 21:30:45] total 386916
[2025-06-05 21:30:45] -rw-r--r--. 2 boinc boinc 215803542 Jun  5 17:10 ATLAS.root_0
[2025-06-05 21:30:45] -rw-r--r--. 2 boinc boinc     15093 Jun  5 17:10 start_atlas.sh
[2025-06-05 21:30:45] -rw-r--r--. 2 boinc boinc    508880 Jun  5 17:10 input.tar.gz
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc 178297322 Jun  5 21:29 HITS.pool.root.1
[2025-06-05 21:30:45] -rw-------. 1 boinc boinc   1566720 Jun  5 21:30 result.tar.gz
21:30:46 (3718): run_atlas exited; CPU time 49400.603761
21:30:46 (3718): called boinc_finish(0)

</stderr_txt>
]]>

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