Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:04:27 (30337): wrapper (7.7.26015): starting
13:04:27 (30337): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 13:04:27] Arguments: --nthreads 8
[2025-06-05 13:04:27] Threads: 8
[2025-06-05 13:04:27] Checking for CVMFS
[2025-06-05 13:04:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 13:04:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 13:04:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 13:04:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 13:04:28] 2.11.2.0 8450 34577 95592 146816 0 60 17701929 25165824 3908 130560 0 18377206 99.780 20725223 2035 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 13:04:28] CVMFS is ok
[2025-06-05 13:04:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:04:29] Checking for apptainer binary...
[2025-06-05 13:04:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 13:04:29] Running /usr/bin/apptainer --version
[2025-06-05 13:04:29] apptainer version 1.3.2-1.el7
[2025-06-05 13:04:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:04:40] cg-vwn262.simple-grid.lan
[2025-06-05 13:04:40] apptainer works
[2025-06-05 13:04:40] Set ATHENA_PROC_NUMBER=8
[2025-06-05 13:04:40] Set ATHENA_CORE_NUMBER=8
[2025-06-05 13:04:40] Starting ATLAS job with PandaID=6678286770
[2025-06-05 13:04:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:10:28]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:10:28] 2025-06-05 14:53:39,954 | INFO     | extracted standard info from prmon json
[2025-06-05 17:10:28] 2025-06-05 14:53:39,954 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:10:28] 2025-06-05 14:53:39,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:10:28] 2025-06-05 14:53:39,955 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:10:28] 2025-06-05 14:53:39,955 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:10:28] 2025-06-05 14:53:39,960 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:10:28] 2025-06-05 14:53:39,960 | INFO     | sum of square deviations: 2954447953.0
[2025-06-05 17:10:28] 2025-06-05 14:53:39,962 | INFO     | sum of deviations: 115340341713.99998
[2025-06-05 17:10:28] 2025-06-05 14:53:39,962 | INFO     | mean x: 1749128659.5
[2025-06-05 17:10:28] 2025-06-05 14:53:39,962 | INFO     | mean y: 2381248.5094339624
[2025-06-05 17:10:28] 2025-06-05 14:53:39,962 | INFO     | -- intersect: -68282828204.452866
[2025-06-05 17:10:28] 2025-06-05 14:53:39,962 | INFO     | intersect: -68282828204.452866
[2025-06-05 17:10:28] 2025-06-05 14:53:39,963 | INFO     | chi2: 8.151245842967304
[2025-06-05 17:10:28] 2025-06-05 14:53:39,963 | INFO     | sum of square deviations: 2750295288.0
[2025-06-05 17:10:28] 2025-06-05 14:53:39,965 | INFO     | sum of deviations: 126089628246.0
[2025-06-05 17:10:28] 2025-06-05 14:53:39,965 | INFO     | mean x: 1749128507.0
[2025-06-05 17:10:28] 2025-06-05 14:53:39,965 | INFO     | mean y: 2389078.565217391
[2025-06-05 17:10:28] 2025-06-05 14:53:39,965 | INFO     | -- intersect: -80187896002.60204
[2025-06-05 17:10:28] 2025-06-05 14:53:39,965 | INFO     | intersect: -80187896002.60204
[2025-06-05 17:10:28] 2025-06-05 14:53:39,966 | INFO     | chi2: 7.455112741613767
[2025-06-05 17:10:28] 2025-06-05 14:53:39,966 | INFO     | current chi2=7.455112741613767 (change=8.54020495473271 %)
[2025-06-05 17:10:28] 2025-06-05 14:53:39,966 | INFO     | right removable region: 206
[2025-06-05 17:10:28] 2025-06-05 14:53:39,966 | INFO     | sum of square deviations: 2750295288.0
[2025-06-05 17:10:28] 2025-06-05 14:53:39,968 | INFO     | sum of deviations: 41093133425.00001
[2025-06-05 17:10:28] 2025-06-05 14:53:39,968 | INFO     | mean x: 1749128812.0
[2025-06-05 17:10:28] 2025-06-05 14:53:39,968 | INFO     | mean y: 2436686.0144927534
[2025-06-05 17:10:28] 2025-06-05 14:53:39,968 | INFO     | -- intersect: -26131914764.406113
[2025-06-05 17:10:28] 2025-06-05 14:53:39,968 | INFO     | intersect: -26131914764.406113
[2025-06-05 17:10:28] 2025-06-05 14:53:39,968 | INFO     | chi2: 2.8602612826873637
[2025-06-05 17:10:28] 2025-06-05 14:53:39,969 | INFO     | current chi2=2.8602612826873637 (change=64.91013352081477 %)
[2025-06-05 17:10:28] 2025-06-05 14:53:39,969 | INFO     | sum of square deviations: 2555770710.5
[2025-06-05 17:10:28] 2025-06-05 14:53:39,970 | INFO     | sum of deviations: -4396986597.500002
[2025-06-05 17:10:28] 2025-06-05 14:53:39,970 | INFO     | mean x: 1749128964.5
[2025-06-05 17:10:28] 2025-06-05 14:53:39,971 | INFO     | mean y: 2472187.8465346536
[2025-06-05 17:10:28] 2025-06-05 14:53:39,971 | INFO     | -- intersect: 3011700121.5608788
[2025-06-05 17:10:28] 2025-06-05 14:53:39,971 | INFO     | intersect: 3011700121.5608788
[2025-06-05 17:10:28] 2025-06-05 14:53:39,971 | INFO     | chi2: 0.8409750848506214
[2025-06-05 17:10:28] 2025-06-05 14:53:39,971 | INFO     | current chi2=0.8409750848506214 (change=70.59796285252368 %)
[2025-06-05 17:10:28] 2025-06-05 14:53:39,972 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 17:10:28] 2025-06-05 14:53:39,973 | INFO     | sum of deviations: -7475833833.000002
[2025-06-05 17:10:28] 2025-06-05 14:53:39,973 | INFO     | mean x: 1749129117.0
[2025-06-05 17:10:28] 2025-06-05 14:53:39,973 | INFO     | mean y: 2474657.989847716
[2025-06-05 17:10:28] 2025-06-05 14:53:39,973 | INFO     | -- intersect: 5518364664.826984
[2025-06-05 17:10:28] 2025-06-05 14:53:39,973 | INFO     | intersect: 5518364664.826984
[2025-06-05 17:10:28] 2025-06-05 14:53:39,974 | INFO     | chi2: 0.8037119206508478
[2025-06-05 17:10:28] 2025-06-05 14:53:39,974 | INFO     | current chi2=0.8037119206508478 (change=4.430947464560438 %)
[2025-06-05 17:10:28] 2025-06-05 14:53:39,974 | INFO     | left removable region: 30
[2025-06-05 17:10:28] 2025-06-05 14:53:39,974 | INFO     | sum of square deviations: 1690450300.0
[2025-06-05 17:10:28] 2025-06-05 14:53:39,975 | INFO     | sum of deviations: 2676247357.4999995
[2025-06-05 17:10:28] 2025-06-05 14:53:39,975 | INFO     | mean x: 1749129391.5
[2025-06-05 17:10:28] 2025-06-05 14:53:39,976 | INFO     | mean y: 2488085.085227273
[2025-06-05 17:10:28] 2025-06-05 14:53:39,976 | INFO     | -- intersect: -2766657456.7431583
[2025-06-05 17:10:28] 2025-06-05 14:53:39,976 | INFO     | intersect: -2766657456.7431583
[2025-06-05 17:10:28] 2025-06-05 14:53:39,976 | INFO     | chi2: 0.00030565461624958813
[2025-06-05 17:10:28] 2025-06-05 14:53:39,976 | INFO     | -- intersect: -2766657456.7431583
[2025-06-05 17:10:28] 2025-06-05 14:53:39,976 | INFO     | current memory leak: 1.58 B/s (using 176 data points, chi2=0.00)
[2025-06-05 17:10:28] 2025-06-05 14:53:39,977 | INFO     | ..............................
[2025-06-05 17:10:28] 2025-06-05 14:53:39,977 | INFO     | . Timing measurements:
[2025-06-05 17:10:28] 2025-06-05 14:53:39,978 | INFO     | . get job = 0 s
[2025-06-05 17:10:28] 2025-06-05 14:53:39,978 | INFO     | . initial setup = 18 s
[2025-06-05 17:10:28] 2025-06-05 14:53:39,978 | INFO     | . payload setup = 192 s
[2025-06-05 17:10:28] 2025-06-05 14:53:39,978 | INFO     | . stage-in = 0 s
[2025-06-05 17:10:28] 2025-06-05 14:53:39,978 | INFO     | . payload execution = 13049 s
[2025-06-05 17:10:28] 2025-06-05 14:53:39,978 | INFO     | . stage-out = 6 s
[2025-06-05 17:10:28] 2025-06-05 14:53:39,978 | INFO     | . log creation = 1 s
[2025-06-05 17:10:28] 2025-06-05 14:53:39,978 | INFO     | ..............................
[2025-06-05 17:10:28] 2025-06-05 14:53:40,096 | INFO     | 
[2025-06-05 17:10:28] 2025-06-05 14:53:40,096 | INFO     | job summary report
[2025-06-05 17:10:28] 2025-06-05 14:53:40,096 | INFO     | --------------------------------------------------
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | PanDA job id: 6678286770
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | task id: 45006595
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | errors: (none)
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | pilot state: finished 
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | transexitcode: 0
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | exeerrorcode: 0
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | exeerrordiag: 
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | exitcode: 0
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | exitmsg: OK
[2025-06-05 17:10:28] 2025-06-05 14:53:40,097 | INFO     | cpuconsumptiontime: 47667 s
[2025-06-05 17:10:28] 2025-06-05 14:53:40,098 | INFO     | nevents: 400
[2025-06-05 17:10:28] 2025-06-05 14:53:40,098 | INFO     | neventsw: 0
[2025-06-05 17:10:28] 2025-06-05 14:53:40,098 | INFO     | pid: 11288
[2025-06-05 17:10:28] 2025-06-05 14:53:40,098 | INFO     | pgrp: 11288
[2025-06-05 17:10:28] 2025-06-05 14:53:40,098 | INFO     | corecount: 8
[2025-06-05 17:10:28] 2025-06-05 14:53:40,098 | INFO     | event service: False
[2025-06-05 17:10:28] 2025-06-05 14:53:40,098 | INFO     | sizes: {0: 2397172, 1: 2397371, 12: 2397371, 22: 2397399, 33: 2397427, 44: 2397483, 55: 2397639, 65: 2397667, 76: 2397695, 87: 2397751, 94: 2397985, 98: 2398293, 1
[2025-06-05 17:10:28] 2025-06-05 14:53:40,098 | INFO     | --------------------------------------------------
[2025-06-05 17:10:28] 2025-06-05 14:53:40,098 | INFO     | 
[2025-06-05 17:10:28] 2025-06-05 14:53:40,098 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-05 17:10:28] 2025-06-05 14:53:40,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,153 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,153 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,154 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:10:28] 2025-06-05 14:53:40,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:10:28] 2025-06-05 14:53:40,155 | INFO     | job 6678286770 has completed (purged errors)
[2025-06-05 17:10:28] 2025-06-05 14:53:40,155 | INFO     | overall cleanup function is called
[2025-06-05 17:10:28] 2025-06-05 14:53:41,165 | INFO     | --- collectZombieJob: --- 10, [11288]
[2025-06-05 17:10:28] 2025-06-05 14:53:41,165 | INFO     | zombie collector waiting for pid 11288
[2025-06-05 17:10:28] 2025-06-05 14:53:41,165 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:10:28] 2025-06-05 14:53:41,165 | INFO     | collected zombie processes
[2025-06-05 17:10:28] 2025-06-05 14:53:41,166 | INFO     | will attempt to kill all subprocesses of pid=11288
[2025-06-05 17:10:28] 2025-06-05 14:53:41,279 | INFO     | process IDs to be killed: [11288] (in reverse order)
[2025-06-05 17:10:28] 2025-06-05 14:53:42,064 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:10:28] 2025-06-05 14:53:42,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:10:28] 2025-06-05 14:53:42,069 | INFO     | did not find any defunct processes belonging to 11288
[2025-06-05 17:10:28] 2025-06-05 14:53:42,077 | INFO     | did not find any defunct processes belonging to 11288
[2025-06-05 17:10:28] 2025-06-05 14:53:42,081 | INFO     | ready for new job
[2025-06-05 17:10:28] 2025-06-05 14:53:42,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:10:28] 2025-06-05 14:53:42,083 | INFO     | **************************************
[2025-06-05 17:10:28] 2025-06-05 14:53:42,084 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:10:28] 2025-06-05 14:53:42,084 | INFO     | **************************************
[2025-06-05 17:10:28] 2025-06-05 14:53:42,084 | INFO     | 
[2025-06-05 17:10:28] 2025-06-05 14:53:42,085 | INFO     | pilot is running in a VM
[2025-06-05 17:10:28] 2025-06-05 14:53:42,085 | INFO     | architecture information:
[2025-06-05 17:10:28] 2025-06-05 14:53:42,099 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:10:28] 2025-06-05 14:53:42,394 | INFO     | cat /etc/os-release:
[2025-06-05 17:10:28] NAME="CentOS Linux"
[2025-06-05 17:10:28] VERSION="7 (Core)"
[2025-06-05 17:10:28] ID="centos"
[2025-06-05 17:10:28] ID_LIKE="rhel fedora"
[2025-06-05 17:10:28] VERSION_ID="7"
[2025-06-05 17:10:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:10:28] ANSI_COLOR="0;31"
[2025-06-05 17:10:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:10:28] HOME_URL="https://www.centos.org/"
[2025-06-05 17:10:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:10:28] 
[2025-06-05 17:10:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:10:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:10:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:10:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:10:28] 
[2025-06-05 17:10:28] 2025-06-05 14:53:42,395 | INFO     | **************************************
[2025-06-05 17:10:28] 2025-06-05 14:53:42,899 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-05 17:10:28] 2025-06-05 14:53:42,973 | INFO     | sufficient remaining disk space (496760782848 B)
[2025-06-05 17:10:28] 2025-06-05 14:53:42,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:10:28] 2025-06-05 14:53:42,974 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:10:28] 2025-06-05 14:53:42,974 | INFO     | update_server=False
[2025-06-05 17:10:28] 2025-06-05 14:53:42,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:10:28] 2025-06-05 14:53:42,976 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 17:10:28] 2025-06-05 14:53:42,976 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:10:28] 2025-06-05 14:53:42,976 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:10:28] 2025-06-05 14:53:42,976 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:10:28] 2025-06-05 14:53:43,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:10:28] 2025-06-05 14:53:43,418 | INFO     | aborting loop
[2025-06-05 17:10:28] 2025-06-05 14:53:43,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:10:28] 2025-06-05 14:53:43,642 | INFO     | all data control threads have been joined
[2025-06-05 17:10:28] 2025-06-05 14:53:43,980 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:44,151 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:44,166 | INFO     | all payload control threads have been joined
[2025-06-05 17:10:28] 2025-06-05 14:53:44,424 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:44,507 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:44,532 | INFO     | all job control threads have been joined
[2025-06-05 17:10:28] 2025-06-05 14:53:44,538 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:44,648 | INFO     | [data] control thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:44,672 | INFO     | [job] validate thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:44,840 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:45,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:10:28] 2025-06-05 14:53:45,121 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:45,171 | INFO     | [payload] control thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:45,224 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:45,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:10:28] 2025-06-05 14:53:45,462 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:45,538 | INFO     | [job] control thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:45,589 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:46,119 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:49,409 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:10:28] 2025-06-05 14:53:51,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139882046859072)>', '<ExcThread(monitor, started 139881732871936)>']
[2025-06-05 17:10:28] 2025-06-05 14:53:52,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:10:28] 2025-06-05 14:53:52,030 | INFO     | [monitor] control thread has ended
[2025-06-05 17:10:28] 2025-06-05 14:53:56,210 | INFO     | all workflow threads have been joined
[2025-06-05 17:10:28] 2025-06-05 14:53:56,210 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:10:28] 2025-06-05 14:53:56,210 | INFO     | traces error code: 0
[2025-06-05 17:10:28] 2025-06-05 14:53:56,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:10:28] 2025-06-05 14:53:56,522 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:10:28] 2025-06-05 14:53:56,545 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:10:28] 2025-06-05 14:53:56,564 [wrapper] pilotpid: 2649
[2025-06-05 17:10:28] 2025-06-05 14:53:56,584 [wrapper] Pilot exit status: 0
[2025-06-05 17:10:28] 2025-06-05 14:53:56,779 [wrapper] pandaids: 6678286770
[2025-06-05 17:10:28] 2025-06-05 14:53:57,340 [wrapper] cleanup supervisor_pilot 20300 2650
[2025-06-05 17:10:28] 2025-06-05 14:53:57,403 [wrapper] Test setup, not cleaning
[2025-06-05 17:10:28] 2025-06-05 14:53:57,522 [wrapper] apfmon messages muted
[2025-06-05 17:10:28] 2025-06-05 14:53:57,630 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:10:28] 2025-06-05 14:53:57,665 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:10:28]  *** Error codes and diagnostics ***
[2025-06-05 17:10:28]     "exeErrorCode": 0,
[2025-06-05 17:10:28]     "exeErrorDiag": "",
[2025-06-05 17:10:28]     "pilotErrorCode": 0,
[2025-06-05 17:10:28]     "pilotErrorDiag": "",
[2025-06-05 17:10:28]  *** Listing of results directory ***
[2025-06-05 17:10:28] total 382280
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc    495897 Jun  4 05:29 pilot3.tar.gz
[2025-06-05 17:10:28] -rwx------. 1 boinc boinc     37140 Jun  4 05:37 runpilot2-wrapper.sh
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:37 queuedata.json
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc       100 Jun  5 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:10:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 13:04 run_atlas
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc       105 Jun  5 13:04 job.xml
[2025-06-05 17:10:28] -rw-r--r--. 2 boinc boinc 213959611 Jun  5 13:04 EVNT.45006593._002071.pool.root.1
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc      6392 Jun  5 13:04 init_data.xml
[2025-06-05 17:10:28] -rw-r--r--. 2 boinc boinc     15093 Jun  5 13:04 start_atlas.sh
[2025-06-05 17:10:28] drwxrwx--x. 2 boinc boinc        68 Jun  5 13:04 shared
[2025-06-05 17:10:28] -rw-r--r--. 2 boinc boinc    508879 Jun  5 13:04 input.tar.gz
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc         0 Jun  5 13:04 boinc_lockfile
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc      2525 Jun  5 13:04 pandaJob.out
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc    982836 Jun  5 13:07 agis_schedconf.cvmfs.json
[2025-06-05 17:10:28] drwx------. 4 boinc boinc      4096 Jun  5 13:08 pilot3
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc 170610602 Jun  5 16:50 HITS.45006595._051683.pool.root.1
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc       531 Jun  5 16:50 boinc_task_state.xml
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc      1012 Jun  5 16:51 memory_monitor_summary.json
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc   1598969 Jun  5 16:51 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc    369239 Jun  5 16:52 log.45006595._051683.job.log.tgz.1
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc        95 Jun  5 16:53 pilot_heartbeat.json
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc      7689 Jun  5 16:53 heartbeat.json
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc      4540 Jun  5 16:53 pilotlog.txt
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc   1163516 Jun  5 16:53 log.45006595._051683.job.log.1
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc       357 Jun  5 16:53 output.list
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc       620 Jun  5 16:53 runtime_log
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc   1556480 Jun  5 16:53 result.tar.gz
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc       656 Jun  5 16:53 tLMODma7tg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmW4mKDm8jaLPo.diag
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc      8673 Jun  5 16:53 runtime_log.err
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc      8192 Jun  5 17:10 boinc_mmap_file
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc        28 Jun  5 17:10 wrapper_checkpoint.txt
[2025-06-05 17:10:28] -rw-r--r--. 1 boinc boinc     20525 Jun  5 17:10 stderr.txt
[2025-06-05 17:10:28] HITS file was successfully produced:
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc 170610602 Jun  5 16:50 shared/HITS.pool.root.1
[2025-06-05 17:10:28]  *** Contents of shared directory: ***
[2025-06-05 17:10:28] total 377596
[2025-06-05 17:10:28] -rw-r--r--. 2 boinc boinc 213959611 Jun  5 13:04 ATLAS.root_0
[2025-06-05 17:10:28] -rw-r--r--. 2 boinc boinc     15093 Jun  5 13:04 start_atlas.sh
[2025-06-05 17:10:28] -rw-r--r--. 2 boinc boinc    508879 Jun  5 13:04 input.tar.gz
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc 170610602 Jun  5 16:50 HITS.pool.root.1
[2025-06-05 17:10:28] -rw-------. 1 boinc boinc   1556480 Jun  5 16:53 result.tar.gz
17:10:30 (30337): run_atlas exited; CPU time 47839.844669
17:10:30 (30337): called boinc_finish(0)

</stderr_txt>
]]>

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