Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:48:10 (3616493): wrapper (7.7.26015): starting
01:48:10 (3616493): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:48:10] Arguments: --nthreads 8
[2025-06-05 01:48:10] Threads: 8
[2025-06-05 01:48:10] Checking for CVMFS
[2025-06-05 01:48:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:48:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:48:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:48:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:48:11] 2.12.6.0 4995 38352 576868 146807 1 437 20421937 32935937 32716 16776704 1 481773939 99.679 397829161 12798 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 01:48:11] CVMFS is ok
[2025-06-05 01:48:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:48:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:48:11] Further information can be found at the LHC@home message board.
[2025-06-05 01:48:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:48:11] Checking for apptainer binary...
[2025-06-05 01:48:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:48:11] Running /usr/bin/apptainer --version
[2025-06-05 01:48:11] apptainer version 1.4.1-1.el9
[2025-06-05 01:48:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:48:11] c7-6-31.aglt2.org
[2025-06-05 01:48:11] apptainer works
[2025-06-05 01:48:11] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:48:11] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:48:11] Starting ATLAS job with PandaID=6680424659
[2025-06-05 01:48:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:19:53]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:19:53]  is_tar=False
[2025-06-05 03:19:53]  lfn=log.45006595._057062.job.log.tgz.1
[2025-06-05 03:19:53]  mtime=0
[2025-06-05 03:19:53]  protocol_id=None
[2025-06-05 03:19:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 03:19:53]  replicas=None
[2025-06-05 03:19:53]  scope=mc23_13p6TeV
[2025-06-05 03:19:53]  status=None
[2025-06-05 03:19:53]  status_code=0
[2025-06-05 03:19:53]  storage_token=
[2025-06-05 03:19:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6680424659/log.45006595._057062.job.log.tgz.1
[2025-06-05 03:19:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/e3/log.45006595._057062.job.log.tgz.1
[2025-06-05 03:19:53]  workdir=None
[2025-06-05 03:19:53] ]
[2025-06-05 03:19:53] 2025-06-05 07:19:30,498 | INFO     | transferring file log.45006595._057062.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6680424659/log.45006595._057062.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 03:19:53] 2025-06-05 07:19:30,498 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6680424659/log.45006595._057062.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._057062.job
[2025-06-05 03:19:53] 2025-06-05 07:19:30,524 | INFO     | adding to output.list: log.45006595._057062.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/e3/log.45006595._057062.job.log.tg
[2025-06-05 03:19:53] 2025-06-05 07:19:30,525 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 03:19:53] 2025-06-05 07:19:30,525 | INFO     | summary of transferred files:
[2025-06-05 03:19:53] 2025-06-05 07:19:30,525 | INFO     |  -- lfn=log.45006595._057062.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 03:19:53] 2025-06-05 07:19:30,525 | INFO     | stage-out finished correctly
[2025-06-05 03:19:53] 2025-06-05 07:19:32,388 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 03:19:53] 2025-06-05 07:19:32,441 | INFO     | monitor loop #392: job 0:6680424659 is in state 'finished'
[2025-06-05 03:19:53] 2025-06-05 07:19:32,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:19:53] 2025-06-05 07:19:32,495 | INFO     | job 6680424659 has state=finished
[2025-06-05 03:19:53] 2025-06-05 07:19:32,495 | INFO     | preparing for final server update for job 6680424659 in state='finished'
[2025-06-05 03:19:53] 2025-06-05 07:19:32,495 | INFO     | this job has now completed (state=finished)
[2025-06-05 03:19:53] 2025-06-05 07:19:32,496 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 03:19:53] 2025-06-05 07:19:32,496 | INFO     | log transfer has been attempted: DONE
[2025-06-05 03:19:53] 2025-06-05 07:19:32,496 | INFO     | job 6680424659 has finished - writing final server update
[2025-06-05 03:19:53] 2025-06-05 07:19:32,496 | INFO     | total number of processed events: 400 (read)
[2025-06-05 03:19:53] 2025-06-05 07:19:32,502 | INFO     | executing command: lscpu
[2025-06-05 03:19:53] 2025-06-05 07:19:32,576 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 03:19:53] 2025-06-05 07:19:34,986 | INFO     | monitor loop #393: job 0:6680424659 is in state 'finished'
[2025-06-05 03:19:53] 2025-06-05 07:19:34,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:19:53] 2025-06-05 07:19:35,543 | INFO     | PID=3621195 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 03:19:53] 2025-06-05 07:19:35,543 | INFO     | .. there are 30 such processes running
[2025-06-05 03:19:53] 2025-06-05 07:19:37,493 | INFO     | monitor loop #394: job 0:6680424659 is in state 'finished'
[2025-06-05 03:19:53] 2025-06-05 07:19:37,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:19:53] 2025-06-05 07:19:39,997 | INFO     | monitor loop #395: job 0:6680424659 is in state 'finished'
[2025-06-05 03:19:53] 2025-06-05 07:19:39,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:19:53] 2025-06-05 07:19:40,957 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 03:19:53] 2025-06-05 07:19:40,958 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680424659/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:19:53] 2025-06-05 07:19:40,958 | INFO     | extracted standard info from prmon json
[2025-06-05 03:19:53] 2025-06-05 07:19:40,958 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:19:53] 2025-06-05 07:19:40,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:19:53] 2025-06-05 07:19:40,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:19:53] 2025-06-05 07:19:40,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:19:53] 2025-06-05 07:19:40,960 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:19:53] 2025-06-05 07:19:40,960 | INFO     | sum of square deviations: 164765880.0
[2025-06-05 03:19:53] 2025-06-05 07:19:40,960 | INFO     | sum of deviations: -12414070105.999996
[2025-06-05 03:19:53] 2025-06-05 07:19:40,960 | INFO     | mean x: 1749105337.0
[2025-06-05 03:19:53] 2025-06-05 07:19:40,960 | INFO     | mean y: 2350998.3703703703
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | -- intersect: 131786408937.40938
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | intersect: 131786408937.40938
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | chi2: 0.21115498289499518
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | -- intersect: 131786408937.40938
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | current memory leak: -75.34 B/s (using 81 data points, chi2=0.21)
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | ..............................
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | . Timing measurements:
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | . get job = 0 s
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | . initial setup = 5 s
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | . payload setup = 21 s
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | . stage-in = 0 s
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | . payload execution = 5379 s
[2025-06-05 03:19:53] 2025-06-05 07:19:40,961 | INFO     | . stage-out = 9 s
[2025-06-05 03:19:53] 2025-06-05 07:19:40,962 | INFO     | . log creation = 0 s
[2025-06-05 03:19:53] 2025-06-05 07:19:40,962 | INFO     | ..............................
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | 
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | job summary report
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | --------------------------------------------------
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | PanDA job id: 6680424659
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | task id: 45006595
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | errors: (none)
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | pilot state: finished 
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | transexitcode: 0
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | exeerrorcode: 0
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | exeerrordiag: 
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | exitcode: 0
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | exitmsg: OK
[2025-06-05 03:19:53] 2025-06-05 07:19:41,027 | INFO     | cpuconsumptiontime: 27870 s
[2025-06-05 03:19:53] 2025-06-05 07:19:41,028 | INFO     | nevents: 400
[2025-06-05 03:19:53] 2025-06-05 07:19:41,028 | INFO     | neventsw: 0
[2025-06-05 03:19:53] 2025-06-05 07:19:41,028 | INFO     | pid: 3630498
[2025-06-05 03:19:53] 2025-06-05 07:19:41,028 | INFO     | pgrp: 3630498
[2025-06-05 03:19:53] 2025-06-05 07:19:41,028 | INFO     | corecount: 8
[2025-06-05 03:19:53] 2025-06-05 07:19:41,028 | INFO     | event service: False
[2025-06-05 03:19:53] 2025-06-05 07:19:41,028 | INFO     | sizes: {0: 2397114, 1: 2397369, 12: 2397369, 13: 2397603, 22: 2397659, 5404: 2424149, 5414: 2433260, 5415: 2433316, 5424: 2433316}
[2025-06-05 03:19:53] 2025-06-05 07:19:41,028 | INFO     | --------------------------------------------------
[2025-06-05 03:19:53] 2025-06-05 07:19:41,028 | INFO     | 
[2025-06-05 03:19:53] 2025-06-05 07:19:41,028 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 03:19:53] 2025-06-05 07:19:41,047 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,048 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,049 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:19:53] 2025-06-05 07:19:41,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,049 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:19:53] 2025-06-05 07:19:41,049 | INFO     | job 6680424659 has completed (purged errors)
[2025-06-05 03:19:53] 2025-06-05 07:19:41,049 | INFO     | overall cleanup function is called
[2025-06-05 03:19:53] 2025-06-05 07:19:42,057 | INFO     | --- collectZombieJob: --- 10, [3630498]
[2025-06-05 03:19:53] 2025-06-05 07:19:42,057 | INFO     | zombie collector waiting for pid 3630498
[2025-06-05 03:19:53] 2025-06-05 07:19:42,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:19:53] 2025-06-05 07:19:42,057 | INFO     | collected zombie processes
[2025-06-05 03:19:53] 2025-06-05 07:19:42,057 | INFO     | will attempt to kill all subprocesses of pid=3630498
[2025-06-05 03:19:53] 2025-06-05 07:19:42,526 | INFO     | process IDs to be killed: [3630498] (in reverse order)
[2025-06-05 03:19:53] 2025-06-05 07:19:42,777 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:19:53] 2025-06-05 07:19:42,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:19:53] 2025-06-05 07:19:42,819 | INFO     | did not find any defunct processes belonging to 3630498
[2025-06-05 03:19:53] 2025-06-05 07:19:42,841 | INFO     | did not find any defunct processes belonging to 3630498
[2025-06-05 03:19:53] 2025-06-05 07:19:42,842 | INFO     | ready for new job
[2025-06-05 03:19:53] 2025-06-05 07:19:42,842 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:19:53] 2025-06-05 07:19:42,844 | INFO     | **************************************
[2025-06-05 03:19:53] 2025-06-05 07:19:42,844 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:19:53] 2025-06-05 07:19:42,844 | INFO     | **************************************
[2025-06-05 03:19:53] 2025-06-05 07:19:42,844 | INFO     | 
[2025-06-05 03:19:53] 2025-06-05 07:19:42,887 | INFO     | architecture information:
[2025-06-05 03:19:53] 2025-06-05 07:19:42,910 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:19:53] 2025-06-05 07:19:42,963 | INFO     | cat /etc/os-release:
[2025-06-05 03:19:53] NAME="CentOS Linux"
[2025-06-05 03:19:53] VERSION="7 (Core)"
[2025-06-05 03:19:53] ID="centos"
[2025-06-05 03:19:53] ID_LIKE="rhel fedora"
[2025-06-05 03:19:53] VERSION_ID="7"
[2025-06-05 03:19:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:19:53] ANSI_COLOR="0;31"
[2025-06-05 03:19:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:19:53] HOME_URL="https://www.centos.org/"
[2025-06-05 03:19:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:19:53] 
[2025-06-05 03:19:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:19:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:19:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:19:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:19:53] 
[2025-06-05 03:19:53] 2025-06-05 07:19:42,964 | INFO     | **************************************
[2025-06-05 03:19:53] 2025-06-05 07:19:43,467 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 03:19:53] 2025-06-05 07:19:43,516 | INFO     | sufficient remaining disk space (75621203968 B)
[2025-06-05 03:19:53] 2025-06-05 07:19:43,517 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:19:53] 2025-06-05 07:19:43,517 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:19:53] 2025-06-05 07:19:43,517 | INFO     | update_server=False
[2025-06-05 03:19:53] 2025-06-05 07:19:43,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:19:53] 2025-06-05 07:19:43,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:19:53] 2025-06-05 07:19:43,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:19:53] 2025-06-05 07:19:43,522 | INFO     | aborting loop
[2025-06-05 03:19:53] 2025-06-05 07:19:43,574 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:19:53] 2025-06-05 07:19:43,574 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:19:53] 2025-06-05 07:19:43,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:19:53] 2025-06-05 07:19:43,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:19:53] 2025-06-05 07:19:44,479 | INFO     | all data control threads have been joined
[2025-06-05 03:19:53] 2025-06-05 07:19:44,523 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:44,528 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:44,539 | INFO     | all job control threads have been joined
[2025-06-05 03:19:53] 2025-06-05 07:19:44,706 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:44,752 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:44,883 | INFO     | all payload control threads have been joined
[2025-06-05 03:19:53] 2025-06-05 07:19:44,908 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:45,124 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:45,365 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:45,485 | INFO     | [data] control thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:45,504 | INFO     | [job] validate thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:45,546 | INFO     | [job] control thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:45,583 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:45,646 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:45,888 | INFO     | [payload] control thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:45,925 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:46,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:19:53] 2025-06-05 07:19:47,057 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:47,526 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:19:53] 2025-06-05 07:19:47,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073631598400)>', '<ExcThread(monitor, started 140073278355200)>']
[2025-06-05 03:19:53] 2025-06-05 07:19:47,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:19:53] 2025-06-05 07:19:47,595 | INFO     | [monitor] control thread has ended
[2025-06-05 03:19:53] 2025-06-05 07:19:52,579 | INFO     | all workflow threads have been joined
[2025-06-05 03:19:53] 2025-06-05 07:19:52,579 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:19:53] 2025-06-05 07:19:52,580 | INFO     | traces error code: 0
[2025-06-05 03:19:53] 2025-06-05 07:19:52,580 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:19:53] 2025-06-05 07:19:52,763 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:19:53] 2025-06-05 07:19:52,771 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:19:53] 2025-06-05 07:19:52,773 [wrapper] pilotpid: 3621195
[2025-06-05 03:19:53] 2025-06-05 07:19:52,781 [wrapper] Pilot exit status: 0
[2025-06-05 03:19:53] 2025-06-05 07:19:52,817 [wrapper] pandaids: 6680424659
[2025-06-05 03:19:53] 2025-06-05 07:19:52,949 [wrapper] cleanup supervisor_pilot  703228 3621196
[2025-06-05 03:19:53] 2025-06-05 07:19:52,991 [wrapper] Test setup, not cleaning
[2025-06-05 03:19:53] 2025-06-05 07:19:53,018 [wrapper] apfmon messages muted
[2025-06-05 03:19:53] 2025-06-05 07:19:53,043 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:19:53] 2025-06-05 07:19:53,052 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:19:53]  *** Error codes and diagnostics ***
[2025-06-05 03:19:53]     "exeErrorCode": 0,
[2025-06-05 03:19:53]     "exeErrorDiag": "",
[2025-06-05 03:19:53]     "pilotErrorCode": 0,
[2025-06-05 03:19:53]     "pilotErrorDiag": "",
[2025-06-05 03:19:53]  *** Listing of results directory ***
[2025-06-05 03:19:53] total 393072
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas    495897 Jun  5 01:37 pilot3.tar.gz
[2025-06-05 03:19:53] -rwx------. 1 boincer umatlas     37140 Jun  5 01:47 runpilot2-wrapper.sh
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas      5111 Jun  5 01:47 queuedata.json
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas       100 Jun  5 01:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:19:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 01:48 run_atlas
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas       105 Jun  5 01:48 job.xml
[2025-06-05 03:19:53] -rw-r--r--. 2 boincer umatlas 215119636 Jun  5 01:48 EVNT.45006593._001919.pool.root.1
[2025-06-05 03:19:53] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 01:48 input.tar.gz
[2025-06-05 03:19:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 01:48 start_atlas.sh
[2025-06-05 03:19:53] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 01:48 shared
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas         0 Jun  5 01:48 boinc_lockfile
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas      2524 Jun  5 01:48 pandaJob.out
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas    987109 Jun  5 01:48 agis_schedconf.cvmfs.json
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas   1598969 Jun  5 01:48 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:19:53] drwx------. 4 boincer umatlas      4096 Jun  5 01:48 pilot3
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas 181892575 Jun  5 03:18 HITS.45006595._057062.pool.root.1
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas       529 Jun  5 03:18 boinc_task_state.xml
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas        95 Jun  5 03:19 pilot_heartbeat.json
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas      1035 Jun  5 03:19 memory_monitor_summary.json
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas    311793 Jun  5 03:19 log.45006595._057062.job.log.tgz.1
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas      7690 Jun  5 03:19 heartbeat.json
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas      6933 Jun  5 03:19 init_data.xml
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas        27 Jun  5 03:19 wrapper_checkpoint.txt
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas      4353 Jun  5 03:19 pilotlog.txt
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas    519284 Jun  5 03:19 log.45006595._057062.job.log.1
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas       357 Jun  5 03:19 output.list
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas       620 Jun  5 03:19 runtime_log
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas    849920 Jun  5 03:19 result.tar.gz
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 03:19 boinc_mmap_file
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas      8654 Jun  5 03:19 runtime_log.err
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas       655 Jun  5 03:19 kBnMDmCdIh7n9Rq4apOajLDm4fhM0noT9bVof3QYDmv4aKDmZGpNEm.diag
[2025-06-05 03:19:53] -rw-r--r--. 1 boincer umatlas     21617 Jun  5 03:19 stderr.txt
[2025-06-05 03:19:53] HITS file was successfully produced:
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas 181892575 Jun  5 03:18 shared/HITS.pool.root.1
[2025-06-05 03:19:53]  *** Contents of shared directory: ***
[2025-06-05 03:19:53] total 389064
[2025-06-05 03:19:53] -rw-r--r--. 2 boincer umatlas 215119636 Jun  5 01:48 ATLAS.root_0
[2025-06-05 03:19:53] -rw-r--r--. 2 boincer umatlas    508882 Jun  5 01:48 input.tar.gz
[2025-06-05 03:19:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 01:48 start_atlas.sh
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas 181892575 Jun  5 03:18 HITS.pool.root.1
[2025-06-05 03:19:53] -rw-------. 1 boincer umatlas    849920 Jun  5 03:19 result.tar.gz
03:20:15 (3616493): run_atlas exited; CPU time 28048.376937
03:20:15 (3616493): called boinc_finish(0)

</stderr_txt>
]]>

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