Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:22:06 (5579): wrapper (7.7.26015): starting
01:22:06 (5579): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 01:22:06] Arguments: --nthreads 12
[2025-06-05 01:22:06] Threads: 12
[2025-06-05 01:22:06] Checking for CVMFS
[2025-06-05 01:22:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:22:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:22:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:22:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:22:07] 2.11.2.0 2981 36649 85800 146807 1 1 19370396 20275200 1 130560 0 17388627 99.983 7004498 8277 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 01:22:07] CVMFS is ok
[2025-06-05 01:22:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:22:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:22:07] Further information can be found at the LHC@home message board.
[2025-06-05 01:22:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:22:07] Checking for apptainer binary...
[2025-06-05 01:22:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:22:07] Running /usr/bin/apptainer --version
[2025-06-05 01:22:07] apptainer version 1.3.2-1.el7
[2025-06-05 01:22:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:22:08] c-205-30.aglt2.org
[2025-06-05 01:22:08] apptainer works
[2025-06-05 01:22:08] Set ATHENA_PROC_NUMBER=12
[2025-06-05 01:22:08] Set ATHENA_CORE_NUMBER=12
[2025-06-05 01:22:08] Starting ATLAS job with PandaID=6667730074
[2025-06-05 01:22:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:52:18]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:52:18]  is_altstaged=None
[2025-06-05 02:52:18]  is_tar=False
[2025-06-05 02:52:18]  lfn=log.44871837._074886.job.log.tgz.1
[2025-06-05 02:52:18]  mtime=0
[2025-06-05 02:52:18]  protocol_id=None
[2025-06-05 02:52:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 02:52:18]  replicas=None
[2025-06-05 02:52:18]  scope=mc23_13p6TeV
[2025-06-05 02:52:18]  status=None
[2025-06-05 02:52:18]  status_code=0
[2025-06-05 02:52:18]  storage_token=
[2025-06-05 02:52:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667730074/log.44871837._074886.job.log.tgz.1
[2025-06-05 02:52:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/67/log.44871837._074886.job.log.tgz.1
[2025-06-05 02:52:18]  workdir=None
[2025-06-05 02:52:18] ]
[2025-06-05 02:52:18] 2025-06-05 06:51:58,620 | INFO     | transferring file log.44871837._074886.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667730074/log.44871837._074886.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-05 02:52:18] 2025-06-05 06:51:58,621 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667730074/log.44871837._074886.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._074886.job
[2025-06-05 02:52:18] 2025-06-05 06:51:58,643 | INFO     | adding to output.list: log.44871837._074886.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/67/log.44871837._074886.job.log.tg
[2025-06-05 02:52:18] 2025-06-05 06:51:58,644 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 02:52:18] 2025-06-05 06:51:58,644 | INFO     | summary of transferred files:
[2025-06-05 02:52:18] 2025-06-05 06:51:58,644 | INFO     |  -- lfn=log.44871837._074886.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 02:52:18] 2025-06-05 06:51:58,644 | INFO     | stage-out finished correctly
[2025-06-05 02:52:18] 2025-06-05 06:51:59,845 | WARNING  | process 15584 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 02:52:18] 2025-06-05 06:51:59,845 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667730074/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:52:18] 2025-06-05 06:51:59,930 | INFO     | number of running child processes to parent process 15584: 1
[2025-06-05 02:52:18] 2025-06-05 06:51:59,931 | INFO     | maximum number of monitored processes: 6
[2025-06-05 02:52:18] 2025-06-05 06:52:00,298 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 02:52:18] 2025-06-05 06:52:00,378 | INFO     | job 6667730074 has state=finished
[2025-06-05 02:52:18] 2025-06-05 06:52:00,378 | INFO     | preparing for final server update for job 6667730074 in state='finished'
[2025-06-05 02:52:18] 2025-06-05 06:52:00,443 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-05 02:52:18] 2025-06-05 06:52:00,443 | INFO     | this job has now completed (state=finished)
[2025-06-05 02:52:18] 2025-06-05 06:52:00,443 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 02:52:18] 2025-06-05 06:52:00,443 | INFO     | log transfer has been attempted: DONE
[2025-06-05 02:52:18] 2025-06-05 06:52:00,443 | INFO     | job 6667730074 has finished - writing final server update
[2025-06-05 02:52:18] 2025-06-05 06:52:00,444 | INFO     | total number of processed events: 400 (read)
[2025-06-05 02:52:18] 2025-06-05 06:52:00,445 | INFO     | executing command: lscpu
[2025-06-05 02:52:18] 2025-06-05 06:52:00,473 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 02:52:18] 2025-06-05 06:52:02,433 | INFO     | monitor loop #402: job 0:6667730074 is in state 'finished'
[2025-06-05 02:52:18] 2025-06-05 06:52:02,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:52:18] 2025-06-05 06:52:04,936 | INFO     | monitor loop #403: job 0:6667730074 is in state 'finished'
[2025-06-05 02:52:18] 2025-06-05 06:52:04,936 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:52:18] 2025-06-05 06:52:05,033 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 02:52:18] 2025-06-05 06:52:05,034 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667730074/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:52:18] 2025-06-05 06:52:05,035 | INFO     | extracted standard info from prmon json
[2025-06-05 02:52:18] 2025-06-05 06:52:05,035 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:52:18] 2025-06-05 06:52:05,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:52:18] 2025-06-05 06:52:05,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:52:18] 2025-06-05 06:52:05,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:52:18] 2025-06-05 06:52:05,039 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:52:18] 2025-06-05 06:52:05,039 | INFO     | sum of square deviations: 164765880.0
[2025-06-05 02:52:18] 2025-06-05 06:52:05,040 | INFO     | sum of deviations: -12972724820.0
[2025-06-05 02:52:18] 2025-06-05 06:52:05,040 | INFO     | mean x: 1749103718.0
[2025-06-05 02:52:18] 2025-06-05 06:52:05,040 | INFO     | mean y: 2836586.827160494
[2025-06-05 02:52:18] 2025-06-05 06:52:05,040 | INFO     | -- intersect: 137717278528.64716
[2025-06-05 02:52:18] 2025-06-05 06:52:05,040 | INFO     | intersect: 137717278528.64716
[2025-06-05 02:52:18] 2025-06-05 06:52:05,040 | INFO     | chi2: 0.06518707716724498
[2025-06-05 02:52:18] 2025-06-05 06:52:05,041 | INFO     | -- intersect: 137717278528.64716
[2025-06-05 02:52:18] 2025-06-05 06:52:05,041 | INFO     | current memory leak: -78.73 B/s (using 81 data points, chi2=0.07)
[2025-06-05 02:52:18] 2025-06-05 06:52:05,041 | INFO     | ..............................
[2025-06-05 02:52:18] 2025-06-05 06:52:05,041 | INFO     | . Timing measurements:
[2025-06-05 02:52:18] 2025-06-05 06:52:05,041 | INFO     | . get job = 0 s
[2025-06-05 02:52:18] 2025-06-05 06:52:05,041 | INFO     | . initial setup = 2 s
[2025-06-05 02:52:18] 2025-06-05 06:52:05,041 | INFO     | . payload setup = 9 s
[2025-06-05 02:52:18] 2025-06-05 06:52:05,042 | INFO     | . stage-in = 0 s
[2025-06-05 02:52:18] 2025-06-05 06:52:05,042 | INFO     | . payload execution = 5346 s
[2025-06-05 02:52:18] 2025-06-05 06:52:05,042 | INFO     | . stage-out = 0 s
[2025-06-05 02:52:18] 2025-06-05 06:52:05,042 | INFO     | . log creation = 0 s
[2025-06-05 02:52:18] 2025-06-05 06:52:05,042 | INFO     | ..............................
[2025-06-05 02:52:18] 2025-06-05 06:52:05,125 | INFO     | 
[2025-06-05 02:52:18] 2025-06-05 06:52:05,125 | INFO     | job summary report
[2025-06-05 02:52:18] 2025-06-05 06:52:05,126 | INFO     | --------------------------------------------------
[2025-06-05 02:52:18] 2025-06-05 06:52:05,126 | INFO     | PanDA job id: 6667730074
[2025-06-05 02:52:18] 2025-06-05 06:52:05,126 | INFO     | task id: 44871837
[2025-06-05 02:52:18] 2025-06-05 06:52:05,126 | INFO     | errors: (none)
[2025-06-05 02:52:18] 2025-06-05 06:52:05,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:52:18] 2025-06-05 06:52:05,126 | INFO     | pilot state: finished 
[2025-06-05 02:52:18] 2025-06-05 06:52:05,127 | INFO     | transexitcode: 0
[2025-06-05 02:52:18] 2025-06-05 06:52:05,127 | INFO     | exeerrorcode: 0
[2025-06-05 02:52:18] 2025-06-05 06:52:05,127 | INFO     | exeerrordiag: 
[2025-06-05 02:52:18] 2025-06-05 06:52:05,127 | INFO     | exitcode: 0
[2025-06-05 02:52:18] 2025-06-05 06:52:05,127 | INFO     | exitmsg: OK
[2025-06-05 02:52:18] 2025-06-05 06:52:05,127 | INFO     | cpuconsumptiontime: 59461 s
[2025-06-05 02:52:18] 2025-06-05 06:52:05,127 | INFO     | nevents: 400
[2025-06-05 02:52:18] 2025-06-05 06:52:05,128 | INFO     | neventsw: 0
[2025-06-05 02:52:18] 2025-06-05 06:52:05,128 | INFO     | pid: 15584
[2025-06-05 02:52:18] 2025-06-05 06:52:05,128 | INFO     | pgrp: 15584
[2025-06-05 02:52:18] 2025-06-05 06:52:05,128 | INFO     | corecount: 12
[2025-06-05 02:52:18] 2025-06-05 06:52:05,128 | INFO     | event service: False
[2025-06-05 02:52:18] 2025-06-05 06:52:05,128 | INFO     | sizes: {0: 2397221, 1: 2397420, 6: 2397626, 12: 2397654, 5359: 2424014, 5361: 2432955, 5362: 2433139, 5367: 2433309}
[2025-06-05 02:52:18] 2025-06-05 06:52:05,129 | INFO     | --------------------------------------------------
[2025-06-05 02:52:18] 2025-06-05 06:52:05,129 | INFO     | 
[2025-06-05 02:52:18] 2025-06-05 06:52:05,129 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 02:52:18] 2025-06-05 06:52:05,152 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,152 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,153 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,153 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,153 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,153 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,155 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,155 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,155 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:52:18] 2025-06-05 06:52:05,155 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,155 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:52:18] 2025-06-05 06:52:05,156 | INFO     | job 6667730074 has completed (purged errors)
[2025-06-05 02:52:18] 2025-06-05 06:52:05,156 | INFO     | overall cleanup function is called
[2025-06-05 02:52:18] 2025-06-05 06:52:06,164 | INFO     | --- collectZombieJob: --- 10, [15584]
[2025-06-05 02:52:18] 2025-06-05 06:52:06,164 | INFO     | zombie collector waiting for pid 15584
[2025-06-05 02:52:18] 2025-06-05 06:52:06,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:52:18] 2025-06-05 06:52:06,165 | INFO     | collected zombie processes
[2025-06-05 02:52:18] 2025-06-05 06:52:06,165 | INFO     | will attempt to kill all subprocesses of pid=15584
[2025-06-05 02:52:18] 2025-06-05 06:52:06,257 | INFO     | process IDs to be killed: [15584] (in reverse order)
[2025-06-05 02:52:18] 2025-06-05 06:52:06,307 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:52:18] 2025-06-05 06:52:06,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:52:18] 2025-06-05 06:52:06,310 | INFO     | did not find any defunct processes belonging to 15584
[2025-06-05 02:52:18] 2025-06-05 06:52:06,313 | INFO     | did not find any defunct processes belonging to 15584
[2025-06-05 02:52:18] 2025-06-05 06:52:06,313 | INFO     | ready for new job
[2025-06-05 02:52:18] 2025-06-05 06:52:06,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:52:18] 2025-06-05 06:52:06,314 | INFO     | **************************************
[2025-06-05 02:52:18] 2025-06-05 06:52:06,314 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:52:18] 2025-06-05 06:52:06,314 | INFO     | **************************************
[2025-06-05 02:52:18] 2025-06-05 06:52:06,314 | INFO     | 
[2025-06-05 02:52:18] 2025-06-05 06:52:06,315 | INFO     | architecture information:
[2025-06-05 02:52:18] 2025-06-05 06:52:06,315 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:52:18] 2025-06-05 06:52:06,329 | INFO     | cat /etc/os-release:
[2025-06-05 02:52:18] NAME="CentOS Linux"
[2025-06-05 02:52:18] VERSION="7 (Core)"
[2025-06-05 02:52:18] ID="centos"
[2025-06-05 02:52:18] ID_LIKE="rhel fedora"
[2025-06-05 02:52:18] VERSION_ID="7"
[2025-06-05 02:52:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:52:18] ANSI_COLOR="0;31"
[2025-06-05 02:52:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:52:18] HOME_URL="https://www.centos.org/"
[2025-06-05 02:52:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:52:18] 
[2025-06-05 02:52:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:52:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:52:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:52:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:52:18] 
[2025-06-05 02:52:18] 2025-06-05 06:52:06,329 | INFO     | **************************************
[2025-06-05 02:52:18] 2025-06-05 06:52:06,832 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 02:52:18] 2025-06-05 06:52:06,848 | INFO     | sufficient remaining disk space (29381099520 B)
[2025-06-05 02:52:18] 2025-06-05 06:52:06,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:52:18] 2025-06-05 06:52:06,849 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:52:18] 2025-06-05 06:52:06,849 | INFO     | update_server=False
[2025-06-05 02:52:18] 2025-06-05 06:52:06,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:52:18] 2025-06-05 06:52:06,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:52:18] 2025-06-05 06:52:06,849 | INFO     | aborting loop
[2025-06-05 02:52:18] 2025-06-05 06:52:06,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:52:18] 2025-06-05 06:52:06,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:52:18] 2025-06-05 06:52:06,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:52:18] 2025-06-05 06:52:07,260 | INFO     | all data control threads have been joined
[2025-06-05 02:52:18] 2025-06-05 06:52:07,716 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:52:18] 2025-06-05 06:52:07,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:52:18] 2025-06-05 06:52:07,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:52:18] 2025-06-05 06:52:07,854 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:07,855 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:07,856 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:08,015 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:08,099 | INFO     | all payload control threads have been joined
[2025-06-05 02:52:18] 2025-06-05 06:52:08,139 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:08,266 | INFO     | [data] control thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:08,289 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:08,317 | INFO     | all job control threads have been joined
[2025-06-05 02:52:18] 2025-06-05 06:52:08,750 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:08,855 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:08,897 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:08,915 | INFO     | [job] validate thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:09,054 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:09,105 | INFO     | [payload] control thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:09,297 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:09,318 | INFO     | [job] control thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:10,856 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:52:18] 2025-06-05 06:52:12,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615321147200)>', '<ExcThread(monitor, started 140614570059520)>']
[2025-06-05 02:52:18] 2025-06-05 06:52:13,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:52:18] 2025-06-05 06:52:13,747 | INFO     | [monitor] control thread has ended
[2025-06-05 02:52:18] 2025-06-05 06:52:17,831 | INFO     | all workflow threads have been joined
[2025-06-05 02:52:18] 2025-06-05 06:52:17,831 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:52:18] 2025-06-05 06:52:17,831 | INFO     | traces error code: 0
[2025-06-05 02:52:18] 2025-06-05 06:52:17,832 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:52:18] 2025-06-05 06:52:17,919 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:52:18] 2025-06-05 06:52:17,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:52:18] 2025-06-05 06:52:17,925 [wrapper] pilotpid: 9172
[2025-06-05 02:52:18] 2025-06-05 06:52:17,929 [wrapper] Pilot exit status: 0
[2025-06-05 02:52:18] 2025-06-05 06:52:17,944 [wrapper] pandaids: 6667730074
[2025-06-05 02:52:18] 2025-06-05 06:52:17,984 [wrapper] cleanup supervisor_pilot  6014 9173
[2025-06-05 02:52:18] 2025-06-05 06:52:17,987 [wrapper] Test setup, not cleaning
[2025-06-05 02:52:18] 2025-06-05 06:52:17,991 [wrapper] apfmon messages muted
[2025-06-05 02:52:18] 2025-06-05 06:52:17,995 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:52:18] 2025-06-05 06:52:17,999 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:52:18]  *** Error codes and diagnostics ***
[2025-06-05 02:52:18]     "exeErrorCode": 0,
[2025-06-05 02:52:18]     "exeErrorDiag": "",
[2025-06-05 02:52:18]     "pilotErrorCode": 0,
[2025-06-05 02:52:18]     "pilotErrorDiag": "",
[2025-06-05 02:52:18]  *** Listing of results directory ***
[2025-06-05 02:52:18] total 416332
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas    495897 May 27 18:42 pilot3.tar.gz
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas      5111 May 27 19:10 queuedata.json
[2025-06-05 02:52:18] -rwx------ 1 boincer umatlas     37140 May 27 19:11 runpilot2-wrapper.sh
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas       100 Jun  5 01:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:52:18] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 01:22 run_atlas
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas       105 Jun  5 01:22 job.xml
[2025-06-05 02:52:18] -rw-r--r-- 2 boincer umatlas 223345358 Jun  5 01:22 EVNT.44871834._002933.pool.root.1
[2025-06-05 02:52:18] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 01:22 start_atlas.sh
[2025-06-05 02:52:18] drwxrwx--x 2 boincer umatlas      4096 Jun  5 01:22 shared
[2025-06-05 02:52:18] -rw-r--r-- 2 boincer umatlas    508880 Jun  5 01:22 input.tar.gz
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas         0 Jun  5 01:22 boinc_lockfile
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 01:22 pandaJob.out
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas    987109 Jun  5 01:22 agis_schedconf.cvmfs.json
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas   1598969 Jun  5 01:22 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:52:18] drwx------ 4 boincer umatlas      4096 Jun  5 01:22 pilot3
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas      5868 Jun  5 02:46 init_data.xml
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas 197362156 Jun  5 02:51 HITS.44871837._074886.pool.root.1
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas        95 Jun  5 02:51 pilot_heartbeat.json
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas       530 Jun  5 02:51 boinc_task_state.xml
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas      1046 Jun  5 02:51 memory_monitor_summary.json
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas    386055 Jun  5 02:51 log.44871837._074886.job.log.tgz.1
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas      7752 Jun  5 02:52 heartbeat.json
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas        27 Jun  5 02:52 wrapper_checkpoint.txt
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 02:52 boinc_mmap_file
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas      4353 Jun  5 02:52 pilotlog.txt
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas    504412 Jun  5 02:52 log.44871837._074886.job.log.1
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas       357 Jun  5 02:52 output.list
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas       620 Jun  5 02:52 runtime_log
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas    911360 Jun  5 02:52 result.tar.gz
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas      8661 Jun  5 02:52 runtime_log.err
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas       659 Jun  5 02:52 dLqKDmmdIe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCcaKDmigmFSn.diag
[2025-06-05 02:52:18] -rw-r--r-- 1 boincer umatlas     21403 Jun  5 02:52 stderr.txt
[2025-06-05 02:52:18] HITS file was successfully produced:
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas 197362156 Jun  5 02:51 shared/HITS.pool.root.1
[2025-06-05 02:52:18]  *** Contents of shared directory: ***
[2025-06-05 02:52:18] total 412264
[2025-06-05 02:52:18] -rw-r--r-- 2 boincer umatlas 223345358 Jun  5 01:22 ATLAS.root_0
[2025-06-05 02:52:18] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 01:22 start_atlas.sh
[2025-06-05 02:52:18] -rw-r--r-- 2 boincer umatlas    508880 Jun  5 01:22 input.tar.gz
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas 197362156 Jun  5 02:51 HITS.pool.root.1
[2025-06-05 02:52:18] -rw------- 1 boincer umatlas    911360 Jun  5 02:52 result.tar.gz
02:52:19 (5579): run_atlas exited; CPU time 59443.976434
02:52:19 (5579): called boinc_finish(0)

</stderr_txt>
]]>

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