Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:20:15 (3515661): wrapper (7.7.26015): starting
01:20:15 (3515661): wrapper: running run_atlas (--nthreads 10)
[2025-06-05 01:20:15] Arguments: --nthreads 10
[2025-06-05 01:20:15] Threads: 10
[2025-06-05 01:20:15] Checking for CVMFS
[2025-06-05 01:20:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:20:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:20:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:20:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:20:16] 2.12.6.0 41504 39519 492128 146807 1 28 21085410 32935937 19125 16776704 0 162943085 99.672 135380866 13047 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-05 01:20:16] CVMFS is ok
[2025-06-05 01:20:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:20:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:20:16] Further information can be found at the LHC@home message board.
[2025-06-05 01:20:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:20:16] Checking for apptainer binary...
[2025-06-05 01:20:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:20:16] Running /usr/bin/apptainer --version
[2025-06-05 01:20:16] apptainer version 1.4.1-1.el9
[2025-06-05 01:20:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:20:16] c-5-4.aglt2.org
[2025-06-05 01:20:16] apptainer works
[2025-06-05 01:20:16] Set ATHENA_PROC_NUMBER=10
[2025-06-05 01:20:16] Set ATHENA_CORE_NUMBER=10
[2025-06-05 01:20:16] Starting ATLAS job with PandaID=6667730671
[2025-06-05 01:20:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:40:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:40:51] 2025-06-05 07:40:26,556 | INFO     | executing command: lscpu
[2025-06-05 03:40:51] 2025-06-05 07:40:26,612 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 03:40:51] 2025-06-05 07:40:26,861 | INFO     | monitor loop #577: job 0:6667730671 is in state 'finished'
[2025-06-05 03:40:51] 2025-06-05 07:40:26,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:40:51] 2025-06-05 07:40:29,364 | INFO     | monitor loop #578: job 0:6667730671 is in state 'finished'
[2025-06-05 03:40:51] 2025-06-05 07:40:29,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:40:51] 2025-06-05 07:40:30,165 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 03:40:51] 2025-06-05 07:40:30,166 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667730671/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:40:51] 2025-06-05 07:40:30,166 | INFO     | extracted standard info from prmon json
[2025-06-05 03:40:51] 2025-06-05 07:40:30,166 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:40:51] 2025-06-05 07:40:30,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:40:51] 2025-06-05 07:40:30,167 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:40:51] 2025-06-05 07:40:30,167 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:40:51] 2025-06-05 07:40:30,169 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:40:51] 2025-06-05 07:40:30,169 | INFO     | sum of square deviations: 814889046.3260869
[2025-06-05 03:40:51] 2025-06-05 07:40:30,169 | INFO     | sum of deviations: -25173800324.478264
[2025-06-05 03:40:51] 2025-06-05 07:40:30,169 | INFO     | mean x: 1749105035.673913
[2025-06-05 03:40:51] 2025-06-05 07:40:30,169 | INFO     | mean y: 2349466.811594203
[2025-06-05 03:40:51] 2025-06-05 07:40:30,170 | INFO     | -- intersect: 54036234341.21298
[2025-06-05 03:40:51] 2025-06-05 07:40:30,170 | INFO     | intersect: 54036234341.21298
[2025-06-05 03:40:51] 2025-06-05 07:40:30,170 | INFO     | chi2: 2.7907040374828394
[2025-06-05 03:40:51] 2025-06-05 07:40:30,170 | INFO     | sum of square deviations: 729490113.6691723
[2025-06-05 03:40:51] 2025-06-05 07:40:30,170 | INFO     | sum of deviations: -14745819668.879686
[2025-06-05 03:40:51] 2025-06-05 07:40:30,170 | INFO     | mean x: 1749104883.1804512
[2025-06-05 03:40:51] 2025-06-05 07:40:30,171 | INFO     | mean y: 2367658.661654135
[2025-06-05 03:40:51] 2025-06-05 07:40:30,171 | INFO     | -- intersect: 35358549608.28107
[2025-06-05 03:40:51] 2025-06-05 07:40:30,171 | INFO     | intersect: 35358549608.28107
[2025-06-05 03:40:51] 2025-06-05 07:40:30,171 | INFO     | chi2: 2.137566945639659
[2025-06-05 03:40:51] 2025-06-05 07:40:30,171 | INFO     | current chi2=2.137566945639659 (change=23.40402576090789 %)
[2025-06-05 03:40:51] 2025-06-05 07:40:30,171 | INFO     | right removable region: 132
[2025-06-05 03:40:51] 2025-06-05 07:40:30,171 | INFO     | sum of square deviations: 729475473.6691723
[2025-06-05 03:40:51] 2025-06-05 07:40:30,172 | INFO     | sum of deviations: -47473677832.35338
[2025-06-05 03:40:51] 2025-06-05 07:40:30,172 | INFO     | mean x: 1749105188.1804512
[2025-06-05 03:40:51] 2025-06-05 07:40:30,172 | INFO     | mean y: 2388792.5563909775
[2025-06-05 03:40:51] 2025-06-05 07:40:30,172 | INFO     | -- intersect: 113832749367.82475
[2025-06-05 03:40:51] 2025-06-05 07:40:30,172 | INFO     | intersect: 113832749367.82475
[2025-06-05 03:40:51] 2025-06-05 07:40:30,172 | INFO     | chi2: 1.0883507526440015
[2025-06-05 03:40:51] 2025-06-05 07:40:30,172 | INFO     | current chi2=1.0883507526440015 (change=61.000853618799624 %)
[2025-06-05 03:40:51] 2025-06-05 07:40:30,172 | INFO     | sum of square deviations: 650248063.5
[2025-06-05 03:40:51] 2025-06-05 07:40:30,173 | INFO     | sum of deviations: -47972295822.75
[2025-06-05 03:40:51] 2025-06-05 07:40:30,173 | INFO     | mean x: 1749105340.6875
[2025-06-05 03:40:51] 2025-06-05 07:40:30,173 | INFO     | mean y: 2389543.40625
[2025-06-05 03:40:51] 2025-06-05 07:40:30,173 | INFO     | -- intersect: 129043294912.61182
[2025-06-05 03:40:51] 2025-06-05 07:40:30,173 | INFO     | intersect: 129043294912.61182
[2025-06-05 03:40:51] 2025-06-05 07:40:30,173 | INFO     | chi2: 0.9791858597027421
[2025-06-05 03:40:51] 2025-06-05 07:40:30,173 | INFO     | current chi2=0.9791858597027421 (change=10.03030435510409 %)
[2025-06-05 03:40:51] 2025-06-05 07:40:30,173 | INFO     | left removable region: 20
[2025-06-05 03:40:51] 2025-06-05 07:40:30,173 | INFO     | sum of square deviations: 435607545.2767866
[2025-06-05 03:40:51] 2025-06-05 07:40:30,174 | INFO     | sum of deviations: -28645079590.82143
[2025-06-05 03:40:51] 2025-06-05 07:40:30,174 | INFO     | mean x: 1749105462.705357
[2025-06-05 03:40:51] 2025-06-05 07:40:30,174 | INFO     | mean y: 2392267.035714286
[2025-06-05 03:40:51] 2025-06-05 07:40:30,174 | INFO     | -- intersect: 115021669906.26875
[2025-06-05 03:40:51] 2025-06-05 07:40:30,174 | INFO     | intersect: 115021669906.26875
[2025-06-05 03:40:51] 2025-06-05 07:40:30,174 | INFO     | chi2: 0.28459160177641646
[2025-06-05 03:40:51] 2025-06-05 07:40:30,174 | INFO     | -- intersect: 115021669906.26875
[2025-06-05 03:40:51] 2025-06-05 07:40:30,174 | INFO     | current memory leak: -65.76 B/s (using 112 data points, chi2=0.28)
[2025-06-05 03:40:51] 2025-06-05 07:40:30,175 | INFO     | ..............................
[2025-06-05 03:40:51] 2025-06-05 07:40:30,175 | INFO     | . Timing measurements:
[2025-06-05 03:40:51] 2025-06-05 07:40:30,175 | INFO     | . get job = 0 s
[2025-06-05 03:40:51] 2025-06-05 07:40:30,175 | INFO     | . initial setup = 3 s
[2025-06-05 03:40:51] 2025-06-05 07:40:30,175 | INFO     | . payload setup = 9 s
[2025-06-05 03:40:51] 2025-06-05 07:40:30,175 | INFO     | . stage-in = 0 s
[2025-06-05 03:40:51] 2025-06-05 07:40:30,175 | INFO     | . payload execution = 8366 s
[2025-06-05 03:40:51] 2025-06-05 07:40:30,175 | INFO     | . stage-out = 0 s
[2025-06-05 03:40:51] 2025-06-05 07:40:30,175 | INFO     | . log creation = 0 s
[2025-06-05 03:40:51] 2025-06-05 07:40:30,175 | INFO     | ..............................
[2025-06-05 03:40:51] 2025-06-05 07:40:30,235 | INFO     | 
[2025-06-05 03:40:51] 2025-06-05 07:40:30,235 | INFO     | job summary report
[2025-06-05 03:40:51] 2025-06-05 07:40:30,235 | INFO     | --------------------------------------------------
[2025-06-05 03:40:51] 2025-06-05 07:40:30,235 | INFO     | PanDA job id: 6667730671
[2025-06-05 03:40:51] 2025-06-05 07:40:30,235 | INFO     | task id: 44871837
[2025-06-05 03:40:51] 2025-06-05 07:40:30,235 | INFO     | errors: (none)
[2025-06-05 03:40:51] 2025-06-05 07:40:30,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:40:51] 2025-06-05 07:40:30,236 | INFO     | pilot state: finished 
[2025-06-05 03:40:51] 2025-06-05 07:40:30,236 | INFO     | transexitcode: 0
[2025-06-05 03:40:51] 2025-06-05 07:40:30,236 | INFO     | exeerrorcode: 0
[2025-06-05 03:40:51] 2025-06-05 07:40:30,236 | INFO     | exeerrordiag: 
[2025-06-05 03:40:51] 2025-06-05 07:40:30,236 | INFO     | exitcode: 0
[2025-06-05 03:40:51] 2025-06-05 07:40:30,236 | INFO     | exitmsg: OK
[2025-06-05 03:40:51] 2025-06-05 07:40:30,236 | INFO     | cpuconsumptiontime: 60582 s
[2025-06-05 03:40:51] 2025-06-05 07:40:30,236 | INFO     | nevents: 400
[2025-06-05 03:40:51] 2025-06-05 07:40:30,237 | INFO     | neventsw: 0
[2025-06-05 03:40:51] 2025-06-05 07:40:30,237 | INFO     | pid: 3539110
[2025-06-05 03:40:51] 2025-06-05 07:40:30,237 | INFO     | pgrp: 3539110
[2025-06-05 03:40:51] 2025-06-05 07:40:30,237 | INFO     | corecount: 10
[2025-06-05 03:40:51] 2025-06-05 07:40:30,237 | INFO     | event service: False
[2025-06-05 03:40:51] 2025-06-05 07:40:30,237 | INFO     | sizes: {0: 2397392, 5: 2397598, 11: 2397654, 8379: 2425412, 8380: 2434353, 8383: 2434409, 8387: 2434707}
[2025-06-05 03:40:51] 2025-06-05 07:40:30,237 | INFO     | --------------------------------------------------
[2025-06-05 03:40:51] 2025-06-05 07:40:30,237 | INFO     | 
[2025-06-05 03:40:51] 2025-06-05 07:40:30,237 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 03:40:51] 2025-06-05 07:40:30,251 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,252 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:40:51] 2025-06-05 07:40:30,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:40:51] 2025-06-05 07:40:30,253 | INFO     | job 6667730671 has completed (purged errors)
[2025-06-05 03:40:51] 2025-06-05 07:40:30,253 | INFO     | overall cleanup function is called
[2025-06-05 03:40:51] 2025-06-05 07:40:31,259 | INFO     | --- collectZombieJob: --- 10, [3539110]
[2025-06-05 03:40:51] 2025-06-05 07:40:31,259 | INFO     | zombie collector waiting for pid 3539110
[2025-06-05 03:40:51] 2025-06-05 07:40:31,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:40:51] 2025-06-05 07:40:31,260 | INFO     | collected zombie processes
[2025-06-05 03:40:51] 2025-06-05 07:40:31,260 | INFO     | will attempt to kill all subprocesses of pid=3539110
[2025-06-05 03:40:51] 2025-06-05 07:40:31,604 | INFO     | process IDs to be killed: [3539110] (in reverse order)
[2025-06-05 03:40:51] 2025-06-05 07:40:31,704 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:40:51] 2025-06-05 07:40:31,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:40:51] 2025-06-05 07:40:31,717 | INFO     | did not find any defunct processes belonging to 3539110
[2025-06-05 03:40:51] 2025-06-05 07:40:31,729 | INFO     | did not find any defunct processes belonging to 3539110
[2025-06-05 03:40:51] 2025-06-05 07:40:31,729 | INFO     | ready for new job
[2025-06-05 03:40:51] 2025-06-05 07:40:31,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:40:51] 2025-06-05 07:40:31,731 | INFO     | **************************************
[2025-06-05 03:40:51] 2025-06-05 07:40:31,731 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:40:51] 2025-06-05 07:40:31,731 | INFO     | **************************************
[2025-06-05 03:40:51] 2025-06-05 07:40:31,732 | INFO     | 
[2025-06-05 03:40:51] 2025-06-05 07:40:31,745 | INFO     | architecture information:
[2025-06-05 03:40:51] 2025-06-05 07:40:31,745 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:40:51] 2025-06-05 07:40:31,759 | INFO     | cat /etc/os-release:
[2025-06-05 03:40:51] NAME="CentOS Linux"
[2025-06-05 03:40:51] VERSION="7 (Core)"
[2025-06-05 03:40:51] ID="centos"
[2025-06-05 03:40:51] ID_LIKE="rhel fedora"
[2025-06-05 03:40:51] VERSION_ID="7"
[2025-06-05 03:40:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:40:51] ANSI_COLOR="0;31"
[2025-06-05 03:40:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:40:51] HOME_URL="https://www.centos.org/"
[2025-06-05 03:40:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:40:51] 
[2025-06-05 03:40:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:40:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:40:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:40:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:40:51] 
[2025-06-05 03:40:51] 2025-06-05 07:40:31,760 | INFO     | **************************************
[2025-06-05 03:40:51] 2025-06-05 07:40:32,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 03:40:51] 2025-06-05 07:40:32,278 | INFO     | sufficient remaining disk space (76569116672 B)
[2025-06-05 03:40:51] 2025-06-05 07:40:32,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:40:51] 2025-06-05 07:40:32,279 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:40:51] 2025-06-05 07:40:32,279 | INFO     | update_server=False
[2025-06-05 03:40:51] 2025-06-05 07:40:32,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:40:51] 2025-06-05 07:40:32,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:40:51] 2025-06-05 07:40:32,280 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 03:40:51] 2025-06-05 07:40:32,280 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:40:51] 2025-06-05 07:40:32,280 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:40:51] 2025-06-05 07:40:32,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:40:51] 2025-06-05 07:40:32,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:40:51] 2025-06-05 07:40:32,458 | INFO     | all data control threads have been joined
[2025-06-05 03:40:51] 2025-06-05 07:40:32,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:40:51] 2025-06-05 07:40:32,873 | INFO     | aborting loop
[2025-06-05 03:40:51] 2025-06-05 07:40:33,283 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:33,346 | INFO     | all job control threads have been joined
[2025-06-05 03:40:51] 2025-06-05 07:40:33,375 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:33,463 | INFO     | [data] control thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:33,532 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:33,643 | INFO     | all payload control threads have been joined
[2025-06-05 03:40:51] 2025-06-05 07:40:33,878 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:34,035 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:34,118 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:34,285 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:34,350 | INFO     | [job] control thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:34,466 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:34,523 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:34,628 | INFO     | [job] validate thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:34,649 | INFO     | [payload] control thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:35,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:40:51] 2025-06-05 07:40:36,249 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:36,286 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:43,312 | INFO     | job.realtimelogging is not enabled
[2025-06-05 03:40:51] 2025-06-05 07:40:44,317 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:40:51] 2025-06-05 07:40:46,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140342982022976)>', '<ExcThread(monitor, started 140342342969088)>']
[2025-06-05 03:40:51] 2025-06-05 07:40:46,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:40:51] 2025-06-05 07:40:46,343 | INFO     | [monitor] control thread has ended
[2025-06-05 03:40:51] 2025-06-05 07:40:51,130 | INFO     | all workflow threads have been joined
[2025-06-05 03:40:51] 2025-06-05 07:40:51,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:40:51] 2025-06-05 07:40:51,131 | INFO     | traces error code: 0
[2025-06-05 03:40:51] 2025-06-05 07:40:51,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:40:51] 2025-06-05 07:40:51,263 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:40:51] 2025-06-05 07:40:51,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:40:51] 2025-06-05 07:40:51,270 [wrapper] pilotpid: 3519295
[2025-06-05 03:40:51] 2025-06-05 07:40:51,273 [wrapper] Pilot exit status: 0
[2025-06-05 03:40:51] 2025-06-05 07:40:51,286 [wrapper] pandaids: 6667730671
[2025-06-05 03:40:51] 2025-06-05 07:40:51,352 [wrapper] cleanup supervisor_pilot  337590 3519296
[2025-06-05 03:40:51] 2025-06-05 07:40:51,356 [wrapper] Test setup, not cleaning
[2025-06-05 03:40:51] 2025-06-05 07:40:51,359 [wrapper] apfmon messages muted
[2025-06-05 03:40:51] 2025-06-05 07:40:51,362 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:40:51] 2025-06-05 07:40:51,365 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:40:51]  *** Error codes and diagnostics ***
[2025-06-05 03:40:51]     "exeErrorCode": 0,
[2025-06-05 03:40:51]     "exeErrorDiag": "",
[2025-06-05 03:40:51]     "pilotErrorCode": 0,
[2025-06-05 03:40:51]     "pilotErrorDiag": "",
[2025-06-05 03:40:51]  *** Listing of results directory ***
[2025-06-05 03:40:51] total 415044
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas    495897 May 27 18:42 pilot3.tar.gz
[2025-06-05 03:40:51] -rwx------. 1 boincer umatlas     37140 May 27 19:25 runpilot2-wrapper.sh
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas      5111 May 27 19:25 queuedata.json
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas       100 Jun  5 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:40:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  5 01:20 run_atlas
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas       105 Jun  5 01:20 job.xml
[2025-06-05 03:40:51] -rw-r--r--. 2 boincer umatlas 223681558 Jun  5 01:20 EVNT.44871834._002938.pool.root.1
[2025-06-05 03:40:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 01:20 start_atlas.sh
[2025-06-05 03:40:51] drwxrwx--x. 2 boincer umatlas      4096 Jun  5 01:20 shared
[2025-06-05 03:40:51] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 01:20 input.tar.gz
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas         0 Jun  5 01:20 boinc_lockfile
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas      2559 Jun  5 01:20 pandaJob.out
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas    987109 Jun  5 01:20 agis_schedconf.cvmfs.json
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas   1598969 Jun  5 01:20 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:40:51] drwx------. 4 boincer umatlas      4096 Jun  5 01:20 pilot3
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas      6656 Jun  5 03:36 init_data.xml
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas 195209541 Jun  5 03:39 HITS.44871837._075001.pool.root.1
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas       529 Jun  5 03:39 boinc_task_state.xml
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas        95 Jun  5 03:40 pilot_heartbeat.json
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas      1043 Jun  5 03:40 memory_monitor_summary.json
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas    375701 Jun  5 03:40 log.44871837._075001.job.log.tgz.1
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas      7718 Jun  5 03:40 heartbeat.json
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas      4548 Jun  5 03:40 pilotlog.txt
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 03:40 boinc_mmap_file
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas    766265 Jun  5 03:40 log.44871837._075001.job.log.1
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas       357 Jun  5 03:40 output.list
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas       620 Jun  5 03:40 runtime_log
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas   1157120 Jun  5 03:40 result.tar.gz
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas        27 Jun  5 03:40 wrapper_checkpoint.txt
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas      8646 Jun  5 03:40 runtime_log.err
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas       651 Jun  5 03:40 dHeMDmqqIe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhdaKDmYWO8fn.diag
[2025-06-05 03:40:51] -rw-r--r--. 1 boincer umatlas     21170 Jun  5 03:40 stderr.txt
[2025-06-05 03:40:51] HITS file was successfully produced:
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas 195209541 Jun  5 03:39 shared/HITS.pool.root.1
[2025-06-05 03:40:51]  *** Contents of shared directory: ***
[2025-06-05 03:40:51] total 410732
[2025-06-05 03:40:51] -rw-r--r--. 2 boincer umatlas 223681558 Jun  5 01:20 ATLAS.root_0
[2025-06-05 03:40:51] -rw-r--r--. 2 boincer umatlas     15093 Jun  5 01:20 start_atlas.sh
[2025-06-05 03:40:51] -rw-r--r--. 2 boincer umatlas    508878 Jun  5 01:20 input.tar.gz
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas 195209541 Jun  5 03:39 HITS.pool.root.1
[2025-06-05 03:40:51] -rw-------. 1 boincer umatlas   1157120 Jun  5 03:40 result.tar.gz
03:40:53 (3515661): run_atlas exited; CPU time 60855.478461
03:40:53 (3515661): called boinc_finish(0)

</stderr_txt>
]]>

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