Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:46:35 (24136): wrapper (7.7.26015): starting
07:46:35 (24136): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 07:46:35] Arguments: --nthreads 8
[2025-06-05 07:46:35] Threads: 8
[2025-06-05 07:46:35] Checking for CVMFS
[2025-06-05 07:46:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 07:46:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 07:46:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 07:46:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 07:46:37] 2.11.2.0 23601 34261 97968 146807 0 16 22936914 25165824 4683 130560 0 18048319 99.807 19853601 2146 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 07:46:37] CVMFS is ok
[2025-06-05 07:46:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:46:37] Checking for apptainer binary...
[2025-06-05 07:46:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 07:46:37] Running /usr/bin/apptainer --version
[2025-06-05 07:46:37] apptainer version 1.3.2-1.el7
[2025-06-05 07:46:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:46:47] cg-vwn275.simple-grid.lan
[2025-06-05 07:46:47] apptainer works
[2025-06-05 07:46:47] Set ATHENA_PROC_NUMBER=8
[2025-06-05 07:46:47] Set ATHENA_CORE_NUMBER=8
[2025-06-05 07:46:48] Starting ATLAS job with PandaID=6680410566
[2025-06-05 07:46:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:23:40]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:23:40] 2025-06-05 09:53:31,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:23:40] 2025-06-05 09:53:31,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:23:40] 2025-06-05 09:53:31,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:23:40] 2025-06-05 09:53:31,144 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:23:40] 2025-06-05 09:53:31,148 | INFO     | sum of square deviations: 3772712597.5
[2025-06-05 12:23:40] 2025-06-05 09:53:31,150 | INFO     | sum of deviations: 113896099370.0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,150 | INFO     | mean x: 1749110072.5
[2025-06-05 12:23:40] 2025-06-05 09:53:31,150 | INFO     | mean y: 2409100.9043478263
[2025-06-05 12:23:40] 2025-06-05 09:53:31,150 | INFO     | -- intersect: -52802253188.64815
[2025-06-05 12:23:40] 2025-06-05 09:53:31,151 | INFO     | intersect: -52802253188.64815
[2025-06-05 12:23:40] 2025-06-05 09:53:31,151 | INFO     | chi2: 7.3370691995018245
[2025-06-05 12:23:40] 2025-06-05 09:53:31,152 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,157 | INFO     | sum of deviations: 126378157819.00002
[2025-06-05 12:23:40] 2025-06-05 09:53:31,157 | INFO     | mean x: 1749109920.0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,157 | INFO     | mean y: 2416837.3777777776
[2025-06-05 12:23:40] 2025-06-05 09:53:31,157 | INFO     | -- intersect: -62582794599.82636
[2025-06-05 12:23:40] 2025-06-05 09:53:31,157 | INFO     | intersect: -62582794599.82636
[2025-06-05 12:23:40] 2025-06-05 09:53:31,158 | INFO     | chi2: 6.619643861211625
[2025-06-05 12:23:40] 2025-06-05 09:53:31,158 | INFO     | current chi2=6.619643861211625 (change=9.778091480163658 %)
[2025-06-05 12:23:40] 2025-06-05 09:53:31,158 | INFO     | right removable region: 224
[2025-06-05 12:23:40] 2025-06-05 09:53:31,158 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,160 | INFO     | sum of deviations: 34247034555.999992
[2025-06-05 12:23:40] 2025-06-05 09:53:31,160 | INFO     | mean x: 1749110225.0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,160 | INFO     | mean y: 2459521.4622222222
[2025-06-05 12:23:40] 2025-06-05 09:53:31,161 | INFO     | -- intersect: -16957419539.292803
[2025-06-05 12:23:40] 2025-06-05 09:53:31,161 | INFO     | intersect: -16957419539.292803
[2025-06-05 12:23:40] 2025-06-05 09:53:31,161 | INFO     | chi2: 2.3890717403994364
[2025-06-05 12:23:40] 2025-06-05 09:53:31,161 | INFO     | current chi2=2.3890717403994364 (change=67.43833708748923 %)
[2025-06-05 12:23:40] 2025-06-05 09:53:31,162 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,163 | INFO     | sum of deviations: -8916455064.5
[2025-06-05 12:23:40] 2025-06-05 09:53:31,163 | INFO     | mean x: 1749110377.5
[2025-06-05 12:23:40] 2025-06-05 09:53:31,163 | INFO     | mean y: 2487967.5681818184
[2025-06-05 12:23:40] 2025-06-05 09:53:31,164 | INFO     | -- intersect: 4726075290.524283
[2025-06-05 12:23:40] 2025-06-05 09:53:31,164 | INFO     | intersect: 4726075290.524283
[2025-06-05 12:23:40] 2025-06-05 09:53:31,164 | INFO     | chi2: 0.8486634487821869
[2025-06-05 12:23:40] 2025-06-05 09:53:31,164 | INFO     | current chi2=0.8486634487821869 (change=64.47727230492056 %)
[2025-06-05 12:23:40] 2025-06-05 09:53:31,165 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,169 | INFO     | sum of deviations: -10971183487.0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,170 | INFO     | mean x: 1749110530.0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,170 | INFO     | mean y: 2489349.0790697676
[2025-06-05 12:23:40] 2025-06-05 09:53:31,170 | INFO     | -- intersect: 6229596293.989033
[2025-06-05 12:23:40] 2025-06-05 09:53:31,170 | INFO     | intersect: 6229596293.989033
[2025-06-05 12:23:40] 2025-06-05 09:53:31,171 | INFO     | chi2: 0.8254277852910845
[2025-06-05 12:23:40] 2025-06-05 09:53:31,171 | INFO     | current chi2=0.8254277852910845 (change=2.73791259944623 %)
[2025-06-05 12:23:40] 2025-06-05 09:53:31,171 | INFO     | left removable region: 30
[2025-06-05 12:23:40] 2025-06-05 09:53:31,172 | INFO     | sum of square deviations: 2263977332.5
[2025-06-05 12:23:40] 2025-06-05 09:53:31,173 | INFO     | sum of deviations: 4753510735.5
[2025-06-05 12:23:40] 2025-06-05 09:53:31,173 | INFO     | mean x: 1749110804.5
[2025-06-05 12:23:40] 2025-06-05 09:53:31,173 | INFO     | mean y: 2498566.036082474
[2025-06-05 12:23:40] 2025-06-05 09:53:31,174 | INFO     | -- intersect: -3669983868.930961
[2025-06-05 12:23:40] 2025-06-05 09:53:31,174 | INFO     | intersect: -3669983868.930961
[2025-06-05 12:23:40] 2025-06-05 09:53:31,174 | INFO     | chi2: 0.0005949437542454338
[2025-06-05 12:23:40] 2025-06-05 09:53:31,174 | INFO     | -- intersect: -3669983868.930961
[2025-06-05 12:23:40] 2025-06-05 09:53:31,175 | INFO     | current memory leak: 2.10 B/s (using 194 data points, chi2=0.00)
[2025-06-05 12:23:40] 2025-06-05 09:53:31,177 | INFO     | ..............................
[2025-06-05 12:23:40] 2025-06-05 09:53:31,177 | INFO     | . Timing measurements:
[2025-06-05 12:23:40] 2025-06-05 09:53:31,177 | INFO     | . get job = 0 s
[2025-06-05 12:23:40] 2025-06-05 09:53:31,177 | INFO     | . initial setup = 4 s
[2025-06-05 12:23:40] 2025-06-05 09:53:31,177 | INFO     | . payload setup = 164 s
[2025-06-05 12:23:40] 2025-06-05 09:53:31,177 | INFO     | . stage-in = 0 s
[2025-06-05 12:23:40] 2025-06-05 09:53:31,178 | INFO     | . payload execution = 14183 s
[2025-06-05 12:23:40] 2025-06-05 09:53:31,178 | INFO     | . stage-out = 5 s
[2025-06-05 12:23:40] 2025-06-05 09:53:31,178 | INFO     | . log creation = 1 s
[2025-06-05 12:23:40] 2025-06-05 09:53:31,178 | INFO     | ..............................
[2025-06-05 12:23:40] 2025-06-05 09:53:31,323 | INFO     | 
[2025-06-05 12:23:40] 2025-06-05 09:53:31,324 | INFO     | job summary report
[2025-06-05 12:23:40] 2025-06-05 09:53:31,324 | INFO     | --------------------------------------------------
[2025-06-05 12:23:40] 2025-06-05 09:53:31,324 | INFO     | PanDA job id: 6680410566
[2025-06-05 12:23:40] 2025-06-05 09:53:31,324 | INFO     | task id: 45006595
[2025-06-05 12:23:40] 2025-06-05 09:53:31,324 | INFO     | errors: (none)
[2025-06-05 12:23:40] 2025-06-05 09:53:31,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:23:40] 2025-06-05 09:53:31,324 | INFO     | pilot state: finished 
[2025-06-05 12:23:40] 2025-06-05 09:53:31,324 | INFO     | transexitcode: 0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,324 | INFO     | exeerrorcode: 0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,324 | INFO     | exeerrordiag: 
[2025-06-05 12:23:40] 2025-06-05 09:53:31,325 | INFO     | exitcode: 0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,325 | INFO     | exitmsg: OK
[2025-06-05 12:23:40] 2025-06-05 09:53:31,325 | INFO     | cpuconsumptiontime: 52385 s
[2025-06-05 12:23:40] 2025-06-05 09:53:31,325 | INFO     | nevents: 400
[2025-06-05 12:23:40] 2025-06-05 09:53:31,325 | INFO     | neventsw: 0
[2025-06-05 12:23:40] 2025-06-05 09:53:31,325 | INFO     | pid: 6433
[2025-06-05 12:23:40] 2025-06-05 09:53:31,325 | INFO     | pgrp: 6433
[2025-06-05 12:23:40] 2025-06-05 09:53:31,325 | INFO     | corecount: 8
[2025-06-05 12:23:40] 2025-06-05 09:53:31,325 | INFO     | event service: False
[2025-06-05 12:23:40] 2025-06-05 09:53:31,325 | INFO     | sizes: {0: 2397070, 1: 2397269, 12: 2397269, 23: 2397297, 34: 2397325, 44: 2397353, 55: 2397509, 66: 2397537, 77: 2397565, 86: 2397827, 87: 2397855, 14351: 2427929
[2025-06-05 12:23:40] 2025-06-05 09:53:31,326 | INFO     | --------------------------------------------------
[2025-06-05 12:23:40] 2025-06-05 09:53:31,326 | INFO     | 
[2025-06-05 12:23:40] 2025-06-05 09:53:31,326 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-05 12:23:40] 2025-06-05 09:53:31,818 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,818 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,818 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,819 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,819 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,819 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,819 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,819 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,819 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,819 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,819 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,819 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,820 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,820 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,820 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,820 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,820 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,820 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:23:40] 2025-06-05 09:53:31,820 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,820 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:23:40] 2025-06-05 09:53:31,820 | INFO     | job 6680410566 has completed (purged errors)
[2025-06-05 12:23:40] 2025-06-05 09:53:31,821 | INFO     | overall cleanup function is called
[2025-06-05 12:23:40] 2025-06-05 09:53:32,830 | INFO     | --- collectZombieJob: --- 10, [6433]
[2025-06-05 12:23:40] 2025-06-05 09:53:32,831 | INFO     | zombie collector waiting for pid 6433
[2025-06-05 12:23:40] 2025-06-05 09:53:32,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:23:40] 2025-06-05 09:53:32,831 | INFO     | collected zombie processes
[2025-06-05 12:23:40] 2025-06-05 09:53:32,831 | INFO     | will attempt to kill all subprocesses of pid=6433
[2025-06-05 12:23:40] 2025-06-05 09:53:32,956 | INFO     | process IDs to be killed: [6433] (in reverse order)
[2025-06-05 12:23:40] 2025-06-05 09:53:33,923 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:23:40] 2025-06-05 09:53:33,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:23:40] 2025-06-05 09:53:33,927 | INFO     | did not find any defunct processes belonging to 6433
[2025-06-05 12:23:40] 2025-06-05 09:53:33,943 | INFO     | did not find any defunct processes belonging to 6433
[2025-06-05 12:23:40] 2025-06-05 09:53:33,944 | INFO     | ready for new job
[2025-06-05 12:23:40] 2025-06-05 09:53:33,944 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:23:40] 2025-06-05 09:53:33,952 | INFO     | **************************************
[2025-06-05 12:23:40] 2025-06-05 09:53:33,952 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:23:40] 2025-06-05 09:53:33,952 | INFO     | **************************************
[2025-06-05 12:23:40] 2025-06-05 09:53:33,952 | INFO     | 
[2025-06-05 12:23:40] 2025-06-05 09:53:33,953 | INFO     | pilot is running in a VM
[2025-06-05 12:23:40] 2025-06-05 09:53:33,953 | INFO     | architecture information:
[2025-06-05 12:23:40] 2025-06-05 09:53:33,956 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:23:40] 2025-06-05 09:53:34,244 | INFO     | cat /etc/os-release:
[2025-06-05 12:23:40] NAME="CentOS Linux"
[2025-06-05 12:23:40] VERSION="7 (Core)"
[2025-06-05 12:23:40] ID="centos"
[2025-06-05 12:23:40] ID_LIKE="rhel fedora"
[2025-06-05 12:23:40] VERSION_ID="7"
[2025-06-05 12:23:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:23:40] ANSI_COLOR="0;31"
[2025-06-05 12:23:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:23:40] HOME_URL="https://www.centos.org/"
[2025-06-05 12:23:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:23:40] 
[2025-06-05 12:23:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:23:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:23:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:23:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:23:40] 
[2025-06-05 12:23:40] 2025-06-05 09:53:34,244 | INFO     | **************************************
[2025-06-05 12:23:40] 2025-06-05 09:53:34,746 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-05 12:23:40] 2025-06-05 09:53:35,052 | INFO     | sufficient remaining disk space (496746102784 B)
[2025-06-05 12:23:40] 2025-06-05 09:53:35,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:23:40] 2025-06-05 09:53:35,053 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:23:40] 2025-06-05 09:53:35,053 | INFO     | update_server=False
[2025-06-05 12:23:40] 2025-06-05 09:53:35,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:23:40] 2025-06-05 09:53:35,054 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 12:23:40] 2025-06-05 09:53:35,055 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:23:40] 2025-06-05 09:53:35,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:23:40] 2025-06-05 09:53:35,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:23:40] 2025-06-05 09:53:35,331 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 12:23:40] 2025-06-05 09:53:35,332 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 12:23:40] 2025-06-05 09:53:35,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:23:40] 2025-06-05 09:53:35,332 | INFO     | will abort loop
[2025-06-05 12:23:40] 2025-06-05 09:53:35,626 | INFO     | all data control threads have been joined
[2025-06-05 12:23:40] 2025-06-05 09:53:36,059 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:36,072 | INFO     | all payload control threads have been joined
[2025-06-05 12:23:40] 2025-06-05 09:53:36,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:23:40] 2025-06-05 09:53:36,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:23:40] 2025-06-05 09:53:36,338 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:36,475 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:36,537 | INFO     | all job control threads have been joined
[2025-06-05 12:23:40] 2025-06-05 09:53:36,632 | INFO     | [data] control thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:36,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:23:40] 2025-06-05 09:53:36,936 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:36,957 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:37,078 | INFO     | [payload] control thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:37,213 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:37,322 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:37,338 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:37,376 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:37,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:37,507 | INFO     | [job] validate thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:37,543 | INFO     | [job] control thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:38,137 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:40,699 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:23:40] 2025-06-05 09:53:41,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639896573760)>', '<ExcThread(monitor, started 140639593273088)>']
[2025-06-05 12:23:40] 2025-06-05 09:53:42,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:23:40] 2025-06-05 09:53:42,097 | INFO     | [monitor] control thread has ended
[2025-06-05 12:23:40] 2025-06-05 09:53:46,811 | INFO     | all workflow threads have been joined
[2025-06-05 12:23:40] 2025-06-05 09:53:46,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:23:40] 2025-06-05 09:53:46,812 | INFO     | traces error code: 0
[2025-06-05 12:23:40] 2025-06-05 09:53:46,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:23:40] 2025-06-05 09:53:47,241 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:23:40] 2025-06-05 09:53:47,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:23:40] 2025-06-05 09:53:47,344 [wrapper] pilotpid: 30226
[2025-06-05 12:23:40] 2025-06-05 09:53:47,388 [wrapper] Pilot exit status: 0
[2025-06-05 12:23:40] 2025-06-05 09:53:47,461 [wrapper] pandaids: 6680410566
[2025-06-05 12:23:40] 2025-06-05 09:53:47,506 [wrapper] cleanup supervisor_pilot 27492 30227
[2025-06-05 12:23:40] 2025-06-05 09:53:47,525 [wrapper] Test setup, not cleaning
[2025-06-05 12:23:40] 2025-06-05 09:53:47,533 [wrapper] apfmon messages muted
[2025-06-05 12:23:40] 2025-06-05 09:53:47,538 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:23:40] 2025-06-05 09:53:47,541 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:23:40]  *** Error codes and diagnostics ***
[2025-06-05 12:23:40]     "exeErrorCode": 0,
[2025-06-05 12:23:40]     "exeErrorDiag": "",
[2025-06-05 12:23:40]     "pilotErrorCode": 0,
[2025-06-05 12:23:40]     "pilotErrorDiag": "",
[2025-06-05 12:23:40]  *** Listing of results directory ***
[2025-06-05 12:23:40] total 396904
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc    495897 Jun  5 07:05 pilot3.tar.gz
[2025-06-05 12:23:40] -rwx------. 1 boinc boinc     37140 Jun  5 07:15 runpilot2-wrapper.sh
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc      5111 Jun  5 07:15 queuedata.json
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc       100 Jun  5 07:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:23:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 07:46 run_atlas
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc       105 Jun  5 07:46 job.xml
[2025-06-05 12:23:40] -rw-r--r--. 2 boinc boinc 215961505 Jun  5 07:46 EVNT.45006593._001918.pool.root.1
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc      6390 Jun  5 07:46 init_data.xml
[2025-06-05 12:23:40] -rw-r--r--. 2 boinc boinc     15093 Jun  5 07:46 start_atlas.sh
[2025-06-05 12:23:40] drwxrwx--x. 2 boinc boinc        68 Jun  5 07:46 shared
[2025-06-05 12:23:40] -rw-r--r--. 2 boinc boinc    508879 Jun  5 07:46 input.tar.gz
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc         0 Jun  5 07:46 boinc_lockfile
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc      2524 Jun  5 07:46 pandaJob.out
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc    987109 Jun  5 07:49 agis_schedconf.cvmfs.json
[2025-06-05 12:23:40] drwx------. 4 boinc boinc      4096 Jun  5 07:49 pilot3
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc 183380095 Jun  5 11:50 HITS.45006595._057058.pool.root.1
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc       530 Jun  5 11:50 boinc_task_state.xml
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc      1013 Jun  5 11:51 memory_monitor_summary.json
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc   1598969 Jun  5 11:51 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc    386776 Jun  5 11:51 log.45006595._057058.job.log.tgz.1
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc        95 Jun  5 11:53 pilot_heartbeat.json
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc      7687 Jun  5 11:53 heartbeat.json
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc      4725 Jun  5 11:53 pilotlog.txt
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc   1248242 Jun  5 11:53 log.45006595._057058.job.log.1
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc       357 Jun  5 11:53 output.list
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc       620 Jun  5 11:53 runtime_log
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc   1658880 Jun  5 11:53 result.tar.gz
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc      8659 Jun  5 11:53 runtime_log.err
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc       657 Jun  5 11:53 9JJODmH8Hh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz4nKDmvuv4Mm.diag
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc        28 Jun  5 12:23 wrapper_checkpoint.txt
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc      8192 Jun  5 12:23 boinc_mmap_file
[2025-06-05 12:23:40] -rw-r--r--. 1 boinc boinc     20520 Jun  5 12:23 stderr.txt
[2025-06-05 12:23:40] HITS file was successfully produced:
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc 183380095 Jun  5 11:50 shared/HITS.pool.root.1
[2025-06-05 12:23:40]  *** Contents of shared directory: ***
[2025-06-05 12:23:40] total 392120
[2025-06-05 12:23:40] -rw-r--r--. 2 boinc boinc 215961505 Jun  5 07:46 ATLAS.root_0
[2025-06-05 12:23:40] -rw-r--r--. 2 boinc boinc     15093 Jun  5 07:46 start_atlas.sh
[2025-06-05 12:23:40] -rw-r--r--. 2 boinc boinc    508879 Jun  5 07:46 input.tar.gz
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc 183380095 Jun  5 11:50 HITS.pool.root.1
[2025-06-05 12:23:40] -rw-------. 1 boinc boinc   1658880 Jun  5 11:53 result.tar.gz
12:23:42 (24136): run_atlas exited; CPU time 52588.597636
12:23:42 (24136): called boinc_finish(0)

</stderr_txt>
]]>

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