Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:42:22 (9091): wrapper (7.7.26015): starting
14:42:22 (9091): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 14:42:22] Arguments: --nthreads 8
[2025-06-05 14:42:22] Threads: 8
[2025-06-05 14:42:22] Checking for CVMFS
[2025-06-05 14:42:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 14:42:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 14:42:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 14:42:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 14:42:23] 2.11.2.0 14391 34650 100836 146819 3 59 19470719 25165825 3132 130560 0 18586927 99.832 19475391 2277 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 14:42:23] CVMFS is ok
[2025-06-05 14:42:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:42:23] Checking for apptainer binary...
[2025-06-05 14:42:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 14:42:23] Running /usr/bin/apptainer --version
[2025-06-05 14:42:24] apptainer version 1.3.2-1.el7
[2025-06-05 14:42:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:42:36] cg-vwn338.simple-grid.lan
[2025-06-05 14:42:36] apptainer works
[2025-06-05 14:42:36] Set ATHENA_PROC_NUMBER=8
[2025-06-05 14:42:36] Set ATHENA_CORE_NUMBER=8
[2025-06-05 14:42:36] Starting ATLAS job with PandaID=6680387945
[2025-06-05 14:42:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:47:55]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:47:55] 2025-06-05 16:47:34,483 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:47:55] 2025-06-05 16:47:34,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:47:55] 2025-06-05 16:47:34,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:47:55] 2025-06-05 16:47:34,489 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:47:55] 2025-06-05 16:47:34,490 | INFO     | sum of square deviations: 3772712597.5
[2025-06-05 18:47:55] 2025-06-05 16:47:34,492 | INFO     | sum of deviations: 122672172114.99998
[2025-06-05 18:47:55] 2025-06-05 16:47:34,492 | INFO     | mean x: 1749135014.5
[2025-06-05 18:47:55] 2025-06-05 16:47:34,492 | INFO     | mean y: 2423003.252173913
[2025-06-05 18:47:55] 2025-06-05 16:47:34,492 | INFO     | -- intersect: -56871824903.49339
[2025-06-05 18:47:55] 2025-06-05 16:47:34,493 | INFO     | intersect: -56871824903.49339
[2025-06-05 18:47:55] 2025-06-05 16:47:34,493 | INFO     | chi2: 6.350344989411511
[2025-06-05 18:47:55] 2025-06-05 16:47:34,493 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,495 | INFO     | sum of deviations: 119537994737.99998
[2025-06-05 18:47:55] 2025-06-05 16:47:34,495 | INFO     | mean x: 1749134862.0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,496 | INFO     | mean y: 2421019.9777777777
[2025-06-05 18:47:55] 2025-06-05 16:47:34,496 | INFO     | -- intersect: -59196237092.662575
[2025-06-05 18:47:55] 2025-06-05 16:47:34,496 | INFO     | intersect: -59196237092.662575
[2025-06-05 18:47:55] 2025-06-05 16:47:34,496 | INFO     | chi2: 6.360751486936317
[2025-06-05 18:47:55] 2025-06-05 16:47:34,496 | INFO     | current chi2=6.360751486936317 (change=-0.1638729477242198 %)
[2025-06-05 18:47:55] 2025-06-05 16:47:34,496 | INFO     | right removable region: 224
[2025-06-05 18:47:55] 2025-06-05 16:47:34,503 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,505 | INFO     | sum of deviations: 43122582013.99999
[2025-06-05 18:47:55] 2025-06-05 16:47:34,505 | INFO     | mean x: 1749135167.0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,506 | INFO     | mean y: 2473357.5377777778
[2025-06-05 18:47:55] 2025-06-05 16:47:34,506 | INFO     | -- intersect: -21353075062.968098
[2025-06-05 18:47:55] 2025-06-05 16:47:34,506 | INFO     | intersect: -21353075062.968098
[2025-06-05 18:47:55] 2025-06-05 16:47:34,506 | INFO     | chi2: 1.4373017592213213
[2025-06-05 18:47:55] 2025-06-05 16:47:34,506 | INFO     | current chi2=1.4373017592213213 (change=77.36655627973188 %)
[2025-06-05 18:47:55] 2025-06-05 16:47:34,507 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,508 | INFO     | sum of deviations: 3980531362.5000014
[2025-06-05 18:47:55] 2025-06-05 16:47:34,509 | INFO     | mean x: 1749135319.5
[2025-06-05 18:47:55] 2025-06-05 16:47:34,509 | INFO     | mean y: 2499115.868181818
[2025-06-05 18:47:55] 2025-06-05 16:47:34,509 | INFO     | -- intersect: -2106259966.658395
[2025-06-05 18:47:55] 2025-06-05 16:47:34,509 | INFO     | intersect: -2106259966.658395
[2025-06-05 18:47:55] 2025-06-05 16:47:34,509 | INFO     | chi2: 0.05656107874364737
[2025-06-05 18:47:55] 2025-06-05 16:47:34,510 | INFO     | current chi2=0.05656107874364737 (change=96.06477356750122 %)
[2025-06-05 18:47:55] 2025-06-05 16:47:34,510 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,512 | INFO     | sum of deviations: 1879343570.9999976
[2025-06-05 18:47:55] 2025-06-05 16:47:34,512 | INFO     | mean x: 1749135472.0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,512 | INFO     | mean y: 2500549.2744186046
[2025-06-05 18:47:55] 2025-06-05 16:47:34,512 | INFO     | -- intersect: -1064206638.4754316
[2025-06-05 18:47:55] 2025-06-05 16:47:34,512 | INFO     | intersect: -1064206638.4754316
[2025-06-05 18:47:55] 2025-06-05 16:47:34,513 | INFO     | chi2: 0.04743817088807812
[2025-06-05 18:47:55] 2025-06-05 16:47:34,513 | INFO     | current chi2=0.04743817088807812 (change=16.129303150169996 %)
[2025-06-05 18:47:55] 2025-06-05 16:47:34,513 | INFO     | left removable region: 30
[2025-06-05 18:47:55] 2025-06-05 16:47:34,513 | INFO     | sum of square deviations: 2263977332.5
[2025-06-05 18:47:55] 2025-06-05 16:47:34,515 | INFO     | sum of deviations: 5897873297.499999
[2025-06-05 18:47:55] 2025-06-05 16:47:34,515 | INFO     | mean x: 1749135746.5
[2025-06-05 18:47:55] 2025-06-05 16:47:34,515 | INFO     | mean y: 2496974.118556701
[2025-06-05 18:47:55] 2025-06-05 16:47:34,515 | INFO     | -- intersect: -4554165703.061793
[2025-06-05 18:47:55] 2025-06-05 16:47:34,515 | INFO     | intersect: -4554165703.061793
[2025-06-05 18:47:55] 2025-06-05 16:47:34,515 | INFO     | chi2: 0.00127961241345133
[2025-06-05 18:47:55] 2025-06-05 16:47:34,516 | INFO     | -- intersect: -4554165703.061793
[2025-06-05 18:47:55] 2025-06-05 16:47:34,516 | INFO     | current memory leak: 2.61 B/s (using 194 data points, chi2=0.00)
[2025-06-05 18:47:55] 2025-06-05 16:47:34,517 | INFO     | ..............................
[2025-06-05 18:47:55] 2025-06-05 16:47:34,517 | INFO     | . Timing measurements:
[2025-06-05 18:47:55] 2025-06-05 16:47:34,517 | INFO     | . get job = 0 s
[2025-06-05 18:47:55] 2025-06-05 16:47:34,517 | INFO     | . initial setup = 10 s
[2025-06-05 18:47:55] 2025-06-05 16:47:34,517 | INFO     | . payload setup = 179 s
[2025-06-05 18:47:55] 2025-06-05 16:47:34,517 | INFO     | . stage-in = 0 s
[2025-06-05 18:47:55] 2025-06-05 16:47:34,517 | INFO     | . payload execution = 14158 s
[2025-06-05 18:47:55] 2025-06-05 16:47:34,517 | INFO     | . stage-out = 1 s
[2025-06-05 18:47:55] 2025-06-05 16:47:34,518 | INFO     | . log creation = 0 s
[2025-06-05 18:47:55] 2025-06-05 16:47:34,518 | INFO     | ..............................
[2025-06-05 18:47:55] 2025-06-05 16:47:34,645 | INFO     | 
[2025-06-05 18:47:55] 2025-06-05 16:47:34,645 | INFO     | job summary report
[2025-06-05 18:47:55] 2025-06-05 16:47:34,645 | INFO     | --------------------------------------------------
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | PanDA job id: 6680387945
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | task id: 45006595
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | errors: (none)
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | pilot state: finished 
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | transexitcode: 0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | exeerrorcode: 0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | exeerrordiag: 
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | exitcode: 0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | exitmsg: OK
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | cpuconsumptiontime: 51043 s
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | nevents: 400
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | neventsw: 0
[2025-06-05 18:47:55] 2025-06-05 16:47:34,646 | INFO     | pid: 28167
[2025-06-05 18:47:55] 2025-06-05 16:47:34,647 | INFO     | pgrp: 28167
[2025-06-05 18:47:55] 2025-06-05 16:47:34,647 | INFO     | corecount: 8
[2025-06-05 18:47:55] 2025-06-05 16:47:34,647 | INFO     | event service: False
[2025-06-05 18:47:55] 2025-06-05 16:47:34,647 | INFO     | sizes: {0: 2397065, 1: 2397320, 12: 2397320, 23: 2397348, 34: 2397376, 44: 2397404, 55: 2397560, 66: 2397588, 77: 2397616, 78: 2397878, 87: 2397934, 14341: 2428118
[2025-06-05 18:47:55] 2025-06-05 16:47:34,647 | INFO     | --------------------------------------------------
[2025-06-05 18:47:55] 2025-06-05 16:47:34,647 | INFO     | 
[2025-06-05 18:47:55] 2025-06-05 16:47:34,647 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-05 18:47:55] 2025-06-05 16:47:34,790 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,790 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,791 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,792 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:47:55] 2025-06-05 16:47:34,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,792 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:47:55] 2025-06-05 16:47:34,792 | INFO     | job 6680387945 has completed (purged errors)
[2025-06-05 18:47:55] 2025-06-05 16:47:34,792 | INFO     | overall cleanup function is called
[2025-06-05 18:47:55] 2025-06-05 16:47:34,826 | INFO     | 14550s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-05 18:47:55] 2025-06-05 16:47:35,810 | INFO     | --- collectZombieJob: --- 10, [28167]
[2025-06-05 18:47:55] 2025-06-05 16:47:35,811 | INFO     | zombie collector waiting for pid 28167
[2025-06-05 18:47:55] 2025-06-05 16:47:35,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:47:55] 2025-06-05 16:47:35,811 | INFO     | collected zombie processes
[2025-06-05 18:47:55] 2025-06-05 16:47:35,811 | INFO     | will attempt to kill all subprocesses of pid=28167
[2025-06-05 18:47:55] 2025-06-05 16:47:35,917 | INFO     | process IDs to be killed: [28167] (in reverse order)
[2025-06-05 18:47:55] 2025-06-05 16:47:36,002 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:47:55] 2025-06-05 16:47:36,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:47:55] 2025-06-05 16:47:36,008 | INFO     | did not find any defunct processes belonging to 28167
[2025-06-05 18:47:55] 2025-06-05 16:47:36,012 | INFO     | did not find any defunct processes belonging to 28167
[2025-06-05 18:47:55] 2025-06-05 16:47:36,012 | INFO     | ready for new job
[2025-06-05 18:47:55] 2025-06-05 16:47:36,012 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:47:55] 2025-06-05 16:47:36,015 | INFO     | **************************************
[2025-06-05 18:47:55] 2025-06-05 16:47:36,015 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:47:55] 2025-06-05 16:47:36,015 | INFO     | **************************************
[2025-06-05 18:47:55] 2025-06-05 16:47:36,015 | INFO     | 
[2025-06-05 18:47:55] 2025-06-05 16:47:36,016 | INFO     | pilot is running in a VM
[2025-06-05 18:47:55] 2025-06-05 16:47:36,016 | INFO     | architecture information:
[2025-06-05 18:47:55] 2025-06-05 16:47:36,016 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:47:55] 2025-06-05 16:47:36,057 | INFO     | cat /etc/os-release:
[2025-06-05 18:47:55] NAME="CentOS Linux"
[2025-06-05 18:47:55] VERSION="7 (Core)"
[2025-06-05 18:47:55] ID="centos"
[2025-06-05 18:47:55] ID_LIKE="rhel fedora"
[2025-06-05 18:47:55] VERSION_ID="7"
[2025-06-05 18:47:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:47:55] ANSI_COLOR="0;31"
[2025-06-05 18:47:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:47:55] HOME_URL="https://www.centos.org/"
[2025-06-05 18:47:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:47:55] 
[2025-06-05 18:47:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:47:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:47:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:47:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:47:55] 
[2025-06-05 18:47:55] 2025-06-05 16:47:36,058 | INFO     | **************************************
[2025-06-05 18:47:55] 2025-06-05 16:47:36,562 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-05 18:47:55] 2025-06-05 16:47:36,602 | INFO     | sufficient remaining disk space (497406705664 B)
[2025-06-05 18:47:55] 2025-06-05 16:47:36,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:47:55] 2025-06-05 16:47:36,602 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:47:55] 2025-06-05 16:47:36,603 | INFO     | update_server=False
[2025-06-05 18:47:55] 2025-06-05 16:47:36,603 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:47:55] 2025-06-05 16:47:36,603 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:47:55] 2025-06-05 16:47:36,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:47:55] 2025-06-05 16:47:36,604 | INFO     | aborting loop
[2025-06-05 18:47:55] 2025-06-05 16:47:36,605 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 18:47:55] 2025-06-05 16:47:36,605 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:47:55] 2025-06-05 16:47:36,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:47:55] 2025-06-05 16:47:36,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:47:55] 2025-06-05 16:47:36,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:47:55] 2025-06-05 16:47:36,831 | INFO     | all data control threads have been joined
[2025-06-05 18:47:55] 2025-06-05 16:47:36,906 | INFO     | all job control threads have been joined
[2025-06-05 18:47:55] 2025-06-05 16:47:37,608 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:37,610 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:37,610 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:37,836 | INFO     | [data] control thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:37,856 | INFO     | all payload control threads have been joined
[2025-06-05 18:47:55] 2025-06-05 16:47:37,913 | INFO     | [job] control thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:37,958 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:38,044 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:38,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:47:55] 2025-06-05 16:47:38,138 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:38,187 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:38,327 | INFO     | [job] validate thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:38,613 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:38,658 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:38,795 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:38,862 | INFO     | [payload] control thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:42,138 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:47,300 | INFO     | job.realtimelogging is not enabled
[2025-06-05 18:47:55] 2025-06-05 16:47:48,305 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:47:55] 2025-06-05 16:47:49,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139795978745664)>', '<ExcThread(monitor, started 139795397334784)>']
[2025-06-05 18:47:55] 2025-06-05 16:47:49,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:47:55] 2025-06-05 16:47:49,678 | INFO     | [monitor] control thread has ended
[2025-06-05 18:47:55] 2025-06-05 16:47:54,517 | INFO     | all workflow threads have been joined
[2025-06-05 18:47:55] 2025-06-05 16:47:54,517 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:47:55] 2025-06-05 16:47:54,518 | INFO     | traces error code: 0
[2025-06-05 18:47:55] 2025-06-05 16:47:54,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:47:55] 2025-06-05 16:47:54,827 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:47:55] 2025-06-05 16:47:54,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:47:55] 2025-06-05 16:47:54,838 [wrapper] pilotpid: 15555
[2025-06-05 18:47:55] 2025-06-05 16:47:54,844 [wrapper] Pilot exit status: 0
[2025-06-05 18:47:55] 2025-06-05 16:47:54,869 [wrapper] pandaids: 6680387945
[2025-06-05 18:47:55] 2025-06-05 16:47:54,916 [wrapper] cleanup supervisor_pilot 18900 15556
[2025-06-05 18:47:55] 2025-06-05 16:47:54,929 [wrapper] Test setup, not cleaning
[2025-06-05 18:47:55] 2025-06-05 16:47:54,933 [wrapper] apfmon messages muted
[2025-06-05 18:47:55] 2025-06-05 16:47:54,937 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:47:55] 2025-06-05 16:47:54,944 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:47:55]  *** Error codes and diagnostics ***
[2025-06-05 18:47:55]     "exeErrorCode": 0,
[2025-06-05 18:47:55]     "exeErrorDiag": "",
[2025-06-05 18:47:55]     "pilotErrorCode": 0,
[2025-06-05 18:47:55]     "pilotErrorDiag": "",
[2025-06-05 18:47:55]  *** Listing of results directory ***
[2025-06-05 18:47:55] total 394796
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc    495897 Jun  5 05:51 pilot3.tar.gz
[2025-06-05 18:47:55] -rwx------. 1 boinc boinc     37140 Jun  5 06:25 runpilot2-wrapper.sh
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc      5111 Jun  5 06:25 queuedata.json
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc       100 Jun  5 14:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:47:55] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 14:42 run_atlas
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc       105 Jun  5 14:42 job.xml
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc      6391 Jun  5 14:42 init_data.xml
[2025-06-05 18:47:55] -rw-r--r--. 2 boinc boinc 215345923 Jun  5 14:42 EVNT.45006593._002133.pool.root.1
[2025-06-05 18:47:55] -rw-r--r--. 2 boinc boinc     15093 Jun  5 14:42 start_atlas.sh
[2025-06-05 18:47:55] drwxrwx--x. 2 boinc boinc        68 Jun  5 14:42 shared
[2025-06-05 18:47:55] -rw-r--r--. 2 boinc boinc    508881 Jun  5 14:42 input.tar.gz
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc         0 Jun  5 14:42 boinc_lockfile
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc      2524 Jun  5 14:42 pandaJob.out
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc    983210 Jun  5 14:45 agis_schedconf.cvmfs.json
[2025-06-05 18:47:55] drwx------. 4 boinc boinc      4096 Jun  5 14:45 pilot3
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc 181841936 Jun  5 18:46 HITS.45006595._057048.pool.root.1
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc       531 Jun  5 18:46 boinc_task_state.xml
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc        95 Jun  5 18:46 pilot_heartbeat.json
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc      1017 Jun  5 18:47 memory_monitor_summary.json
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc   1598969 Jun  5 18:47 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc    395210 Jun  5 18:47 log.45006595._057048.job.log.tgz.1
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc      7695 Jun  5 18:47 heartbeat.json
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc        28 Jun  5 18:47 wrapper_checkpoint.txt
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc      8192 Jun  5 18:47 boinc_mmap_file
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc      4612 Jun  5 18:47 pilotlog.txt
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc   1238362 Jun  5 18:47 log.45006595._057048.job.log.1
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc       357 Jun  5 18:47 output.list
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc       620 Jun  5 18:47 runtime_log
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc   1648640 Jun  5 18:47 result.tar.gz
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc      8673 Jun  5 18:47 runtime_log.err
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc       656 Jun  5 18:47 AJ5LDmILHh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmq4nKDmNDgSIn.diag
[2025-06-05 18:47:55] -rw-r--r--. 1 boinc boinc     20561 Jun  5 18:47 stderr.txt
[2025-06-05 18:47:55] HITS file was successfully produced:
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc 181841936 Jun  5 18:46 shared/HITS.pool.root.1
[2025-06-05 18:47:55]  *** Contents of shared directory: ***
[2025-06-05 18:47:55] total 390012
[2025-06-05 18:47:55] -rw-r--r--. 2 boinc boinc 215345923 Jun  5 14:42 ATLAS.root_0
[2025-06-05 18:47:55] -rw-r--r--. 2 boinc boinc     15093 Jun  5 14:42 start_atlas.sh
[2025-06-05 18:47:55] -rw-r--r--. 2 boinc boinc    508881 Jun  5 14:42 input.tar.gz
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc 181841936 Jun  5 18:46 HITS.pool.root.1
[2025-06-05 18:47:55] -rw-------. 1 boinc boinc   1648640 Jun  5 18:47 result.tar.gz
18:47:57 (9091): run_atlas exited; CPU time 51228.415369
18:47:57 (9091): called boinc_finish(0)

</stderr_txt>
]]>

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