Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:54:30 (21704): wrapper (7.7.26015): starting
00:54:30 (21704): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:54:30] Arguments: --nthreads 12
[2025-06-05 00:54:30] Threads: 12
[2025-06-05 00:54:30] Checking for CVMFS
[2025-06-05 00:54:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:54:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:54:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:54:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:54:30] 2.11.2.0 3087 36623 93412 146806 3 57 13651480 20275200 1 130560 0 16847089 99.987 6051422 7438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 00:54:30] CVMFS is ok
[2025-06-05 00:54:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:54:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:54:30] Further information can be found at the LHC@home message board.
[2025-06-05 00:54:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:54:30] Checking for apptainer binary...
[2025-06-05 00:54:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:54:30] Running /usr/bin/apptainer --version
[2025-06-05 00:54:30] apptainer version 1.3.2-1.el7
[2025-06-05 00:54:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:54:32] c-115-42.aglt2.org
[2025-06-05 00:54:32] apptainer works
[2025-06-05 00:54:32] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:54:32] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:54:32] Starting ATLAS job with PandaID=6667729907
[2025-06-05 00:54:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:18:17]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:18:17] 2025-06-05 06:17:49,871 | INFO     | adding to output.list: log.44871837._074719.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/ce/log.44871837._074719.job.log.tg
[2025-06-05 02:18:17] 2025-06-05 06:17:49,873 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 02:18:17] 2025-06-05 06:17:49,873 | INFO     | summary of transferred files:
[2025-06-05 02:18:17] 2025-06-05 06:17:49,873 | INFO     |  -- lfn=log.44871837._074719.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 02:18:17] 2025-06-05 06:17:49,873 | INFO     | stage-out finished correctly
[2025-06-05 02:18:17] 2025-06-05 06:17:50,393 | WARNING  | process 31986 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 02:18:17] 2025-06-05 06:17:50,393 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667729907/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:18:17] 2025-06-05 06:17:50,394 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667729907/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:18:17] 2025-06-05 06:17:50,395 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3962473 B
[2025-06-05 02:18:17] 2025-06-05 06:17:50,395 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16749 B
[2025-06-05 02:18:17] 2025-06-05 06:17:50,395 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 02:18:17] 2025-06-05 06:17:50,412 | INFO     | sufficient remaining disk space (18594398208 B)
[2025-06-05 02:18:17] 2025-06-05 06:17:50,412 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 02:18:17] 2025-06-05 06:17:50,413 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6667729907: 4264706 B (within 2537553920 B limit)
[2025-06-05 02:18:17] 2025-06-05 06:17:50,413 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6667729907/HITS.44871837._074719.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 02:18:17] 2025-06-05 06:17:50,413 | INFO     | total size of present files: 0 B (workdir size: 4264706 B)
[2025-06-05 02:18:17] 2025-06-05 06:17:50,414 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6667729907/HITS.44871837._074719.pool.root.1 since it does not exist
[2025-06-05 02:18:17] 2025-06-05 06:17:50,498 | INFO     | number of running child processes to parent process 31986: 1
[2025-06-05 02:18:17] 2025-06-05 06:17:50,498 | INFO     | maximum number of monitored processes: 6
[2025-06-05 02:18:17] 2025-06-05 06:17:50,575 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 02:18:17] 2025-06-05 06:17:50,651 | INFO     | 4988s have passed since pilot start - server update state is 'RUNNING'
[2025-06-05 02:18:17] 2025-06-05 06:17:52,938 | INFO     | job 6667729907 has state=finished
[2025-06-05 02:18:17] 2025-06-05 06:17:52,939 | INFO     | preparing for final server update for job 6667729907 in state='finished'
[2025-06-05 02:18:17] 2025-06-05 06:17:52,939 | INFO     | this job has now completed (state=finished)
[2025-06-05 02:18:17] 2025-06-05 06:17:52,939 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 02:18:17] 2025-06-05 06:17:52,940 | INFO     | log transfer has been attempted: DONE
[2025-06-05 02:18:17] 2025-06-05 06:17:52,940 | INFO     | job 6667729907 has finished - writing final server update
[2025-06-05 02:18:17] 2025-06-05 06:17:52,940 | INFO     | total number of processed events: 400 (read)
[2025-06-05 02:18:17] 2025-06-05 06:17:52,942 | INFO     | executing command: lscpu
[2025-06-05 02:18:17] 2025-06-05 06:17:52,973 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 02:18:17] 2025-06-05 06:17:53,001 | INFO     | monitor loop #373: job 0:6667729907 is in state 'finished'
[2025-06-05 02:18:17] 2025-06-05 06:17:53,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:18:17] 2025-06-05 06:17:55,504 | INFO     | monitor loop #374: job 0:6667729907 is in state 'finished'
[2025-06-05 02:18:17] 2025-06-05 06:17:55,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:18:17] 2025-06-05 06:17:55,772 | INFO     | PID=25357 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 02:18:17] 2025-06-05 06:17:58,008 | INFO     | monitor loop #375: job 0:6667729907 is in state 'finished'
[2025-06-05 02:18:17] 2025-06-05 06:17:58,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:18:17] 2025-06-05 06:17:58,532 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 02:18:17] 2025-06-05 06:17:58,532 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667729907/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:18:17] 2025-06-05 06:17:58,533 | INFO     | extracted standard info from prmon json
[2025-06-05 02:18:17] 2025-06-05 06:17:58,533 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:18:17] 2025-06-05 06:17:58,534 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:18:17] 2025-06-05 06:17:58,534 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:18:17] 2025-06-05 06:17:58,534 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:18:17] 2025-06-05 06:17:58,536 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:18:17] 2025-06-05 06:17:58,537 | INFO     | sum of square deviations: 130793150.0
[2025-06-05 02:18:17] 2025-06-05 06:17:58,537 | INFO     | sum of deviations: -4229789044.0000005
[2025-06-05 02:18:17] 2025-06-05 06:17:58,537 | INFO     | mean x: 1749101877.0
[2025-06-05 02:18:17] 2025-06-05 06:17:58,537 | INFO     | mean y: 2748802.52
[2025-06-05 02:18:17] 2025-06-05 06:17:58,537 | INFO     | -- intersect: 56567882039.04222
[2025-06-05 02:18:17] 2025-06-05 06:17:58,538 | INFO     | intersect: 56567882039.04222
[2025-06-05 02:18:17] 2025-06-05 06:17:58,538 | INFO     | chi2: 0.07392926012058948
[2025-06-05 02:18:17] 2025-06-05 06:17:58,538 | INFO     | -- intersect: 56567882039.04222
[2025-06-05 02:18:17] 2025-06-05 06:17:58,538 | INFO     | current memory leak: -32.34 B/s (using 75 data points, chi2=0.07)
[2025-06-05 02:18:17] 2025-06-05 06:17:58,539 | INFO     | ..............................
[2025-06-05 02:18:17] 2025-06-05 06:17:58,539 | INFO     | . Timing measurements:
[2025-06-05 02:18:17] 2025-06-05 06:17:58,539 | INFO     | . get job = 0 s
[2025-06-05 02:18:17] 2025-06-05 06:17:58,539 | INFO     | . initial setup = 2 s
[2025-06-05 02:18:17] 2025-06-05 06:17:58,539 | INFO     | . payload setup = 9 s
[2025-06-05 02:18:17] 2025-06-05 06:17:58,539 | INFO     | . stage-in = 0 s
[2025-06-05 02:18:17] 2025-06-05 06:17:58,539 | INFO     | . payload execution = 4954 s
[2025-06-05 02:18:17] 2025-06-05 06:17:58,540 | INFO     | . stage-out = 0 s
[2025-06-05 02:18:17] 2025-06-05 06:17:58,540 | INFO     | . log creation = 0 s
[2025-06-05 02:18:17] 2025-06-05 06:17:58,540 | INFO     | ..............................
[2025-06-05 02:18:17] 2025-06-05 06:17:58,619 | INFO     | 
[2025-06-05 02:18:17] 2025-06-05 06:17:58,619 | INFO     | job summary report
[2025-06-05 02:18:17] 2025-06-05 06:17:58,619 | INFO     | --------------------------------------------------
[2025-06-05 02:18:17] 2025-06-05 06:17:58,619 | INFO     | PanDA job id: 6667729907
[2025-06-05 02:18:17] 2025-06-05 06:17:58,620 | INFO     | task id: 44871837
[2025-06-05 02:18:17] 2025-06-05 06:17:58,620 | INFO     | errors: (none)
[2025-06-05 02:18:17] 2025-06-05 06:17:58,620 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:18:17] 2025-06-05 06:17:58,620 | INFO     | pilot state: finished 
[2025-06-05 02:18:17] 2025-06-05 06:17:58,620 | INFO     | transexitcode: 0
[2025-06-05 02:18:17] 2025-06-05 06:17:58,620 | INFO     | exeerrorcode: 0
[2025-06-05 02:18:17] 2025-06-05 06:17:58,621 | INFO     | exeerrordiag: 
[2025-06-05 02:18:17] 2025-06-05 06:17:58,621 | INFO     | exitcode: 0
[2025-06-05 02:18:17] 2025-06-05 06:17:58,621 | INFO     | exitmsg: OK
[2025-06-05 02:18:17] 2025-06-05 06:17:58,621 | INFO     | cpuconsumptiontime: 54563 s
[2025-06-05 02:18:17] 2025-06-05 06:17:58,621 | INFO     | nevents: 400
[2025-06-05 02:18:17] 2025-06-05 06:17:58,621 | INFO     | neventsw: 0
[2025-06-05 02:18:17] 2025-06-05 06:17:58,622 | INFO     | pid: 31986
[2025-06-05 02:18:17] 2025-06-05 06:17:58,622 | INFO     | pgrp: 31986
[2025-06-05 02:18:17] 2025-06-05 06:17:58,622 | INFO     | corecount: 12
[2025-06-05 02:18:17] 2025-06-05 06:17:58,622 | INFO     | event service: False
[2025-06-05 02:18:17] 2025-06-05 06:17:58,622 | INFO     | sizes: {0: 2396564, 1: 2397420, 6: 2397626, 12: 2397654, 4967: 2423778, 4969: 2432719, 4970: 2432931, 4978: 2433101}
[2025-06-05 02:18:17] 2025-06-05 06:17:58,622 | INFO     | --------------------------------------------------
[2025-06-05 02:18:17] 2025-06-05 06:17:58,623 | INFO     | 
[2025-06-05 02:18:17] 2025-06-05 06:17:58,623 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 02:18:17] 2025-06-05 06:17:58,649 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,649 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,649 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,649 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,652 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:18:17] 2025-06-05 06:17:58,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:18:17] 2025-06-05 06:17:58,652 | INFO     | job 6667729907 has completed (purged errors)
[2025-06-05 02:18:17] 2025-06-05 06:17:58,653 | INFO     | overall cleanup function is called
[2025-06-05 02:18:17] 2025-06-05 06:17:59,658 | INFO     | --- collectZombieJob: --- 10, [31986]
[2025-06-05 02:18:17] 2025-06-05 06:17:59,669 | INFO     | zombie collector waiting for pid 31986
[2025-06-05 02:18:17] 2025-06-05 06:17:59,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:18:17] 2025-06-05 06:17:59,669 | INFO     | collected zombie processes
[2025-06-05 02:18:17] 2025-06-05 06:17:59,669 | INFO     | will attempt to kill all subprocesses of pid=31986
[2025-06-05 02:18:17] 2025-06-05 06:17:59,755 | INFO     | process IDs to be killed: [31986] (in reverse order)
[2025-06-05 02:18:17] 2025-06-05 06:17:59,806 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:18:17] 2025-06-05 06:17:59,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:18:17] 2025-06-05 06:17:59,810 | INFO     | did not find any defunct processes belonging to 31986
[2025-06-05 02:18:17] 2025-06-05 06:17:59,814 | INFO     | did not find any defunct processes belonging to 31986
[2025-06-05 02:18:17] 2025-06-05 06:17:59,814 | INFO     | ready for new job
[2025-06-05 02:18:17] 2025-06-05 06:17:59,814 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:18:17] 2025-06-05 06:17:59,815 | INFO     | **************************************
[2025-06-05 02:18:17] 2025-06-05 06:17:59,815 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:18:17] 2025-06-05 06:17:59,815 | INFO     | **************************************
[2025-06-05 02:18:17] 2025-06-05 06:17:59,815 | INFO     | 
[2025-06-05 02:18:17] 2025-06-05 06:17:59,816 | INFO     | architecture information:
[2025-06-05 02:18:17] 2025-06-05 06:17:59,816 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:18:17] 2025-06-05 06:17:59,831 | INFO     | cat /etc/os-release:
[2025-06-05 02:18:17] NAME="CentOS Linux"
[2025-06-05 02:18:17] VERSION="7 (Core)"
[2025-06-05 02:18:17] ID="centos"
[2025-06-05 02:18:17] ID_LIKE="rhel fedora"
[2025-06-05 02:18:17] VERSION_ID="7"
[2025-06-05 02:18:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:18:17] ANSI_COLOR="0;31"
[2025-06-05 02:18:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:18:17] HOME_URL="https://www.centos.org/"
[2025-06-05 02:18:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:18:17] 
[2025-06-05 02:18:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:18:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:18:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:18:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:18:17] 
[2025-06-05 02:18:17] 2025-06-05 06:17:59,831 | INFO     | **************************************
[2025-06-05 02:18:17] 2025-06-05 06:18:00,334 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 02:18:17] 2025-06-05 06:18:00,350 | INFO     | sufficient remaining disk space (18598592512 B)
[2025-06-05 02:18:17] 2025-06-05 06:18:00,350 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:18:17] 2025-06-05 06:18:00,351 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:18:17] 2025-06-05 06:18:00,351 | INFO     | update_server=False
[2025-06-05 02:18:17] 2025-06-05 06:18:00,351 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:18:17] 2025-06-05 06:18:00,351 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:18:17] 2025-06-05 06:18:00,351 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:18:17] 2025-06-05 06:18:00,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:18:17] 2025-06-05 06:18:00,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:18:17] 2025-06-05 06:18:00,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:18:17] 2025-06-05 06:18:00,463 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:18:17] 2025-06-05 06:18:00,511 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 02:18:17] 2025-06-05 06:18:00,511 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 02:18:17] 2025-06-05 06:18:00,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:18:17] 2025-06-05 06:18:00,512 | INFO     | will abort loop
[2025-06-05 02:18:17] 2025-06-05 06:18:00,584 | INFO     | all payload control threads have been joined
[2025-06-05 02:18:17] 2025-06-05 06:18:01,095 | INFO     | all data control threads have been joined
[2025-06-05 02:18:17] 2025-06-05 06:18:01,165 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:18:17] 2025-06-05 06:18:01,356 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:01,358 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:01,517 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:01,589 | INFO     | [payload] control thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:01,655 | INFO     | [job] validate thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:01,777 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:01,835 | INFO     | all job control threads have been joined
[2025-06-05 02:18:17] 2025-06-05 06:18:01,877 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:02,097 | INFO     | [data] control thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:02,226 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:02,396 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:02,469 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:02,504 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:02,561 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:02,842 | INFO     | [job] control thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:05,170 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:10,727 | INFO     | job.realtimelogging is not enabled
[2025-06-05 02:18:17] 2025-06-05 06:18:11,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:18:17] 2025-06-05 06:18:12,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562011715392)>', '<ExcThread(monitor, started 140561092687616)>']
[2025-06-05 02:18:17] 2025-06-05 06:18:12,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:18:17] 2025-06-05 06:18:12,410 | INFO     | [monitor] control thread has ended
[2025-06-05 02:18:17] 2025-06-05 06:18:17,169 | INFO     | all workflow threads have been joined
[2025-06-05 02:18:17] 2025-06-05 06:18:17,169 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:18:17] 2025-06-05 06:18:17,170 | INFO     | traces error code: 0
[2025-06-05 02:18:17] 2025-06-05 06:18:17,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:18:17] 2025-06-05 06:18:17,260 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:18:17] 2025-06-05 06:18:17,264 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:18:17] 2025-06-05 06:18:17,267 [wrapper] pilotpid: 25357
[2025-06-05 02:18:17] 2025-06-05 06:18:17,271 [wrapper] Pilot exit status: 0
[2025-06-05 02:18:17] 2025-06-05 06:18:17,286 [wrapper] pandaids: 6667729907
[2025-06-05 02:18:17] 2025-06-05 06:18:17,320 [wrapper] cleanup supervisor_pilot  2437 25358
[2025-06-05 02:18:17] 2025-06-05 06:18:17,324 [wrapper] Test setup, not cleaning
[2025-06-05 02:18:17] 2025-06-05 06:18:17,327 [wrapper] apfmon messages muted
[2025-06-05 02:18:17] 2025-06-05 06:18:17,331 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:18:17] 2025-06-05 06:18:17,334 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:18:17]  *** Error codes and diagnostics ***
[2025-06-05 02:18:17]     "exeErrorCode": 0,
[2025-06-05 02:18:17]     "exeErrorDiag": "",
[2025-06-05 02:18:17]     "pilotErrorCode": 0,
[2025-06-05 02:18:17]     "pilotErrorDiag": "",
[2025-06-05 02:18:17]  *** Listing of results directory ***
[2025-06-05 02:18:17] total 420364
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas    495897 May 27 18:42 pilot3.tar.gz
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas      5111 May 27 19:05 queuedata.json
[2025-06-05 02:18:17] -rwx------ 1 boincer umatlas     37140 May 27 19:05 runpilot2-wrapper.sh
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas       100 Jun  5 00:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:18:17] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 00:54 run_atlas
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas       105 Jun  5 00:54 job.xml
[2025-06-05 02:18:17] -rw-r--r-- 2 boincer umatlas 225168266 Jun  5 00:54 EVNT.44871834._002927.pool.root.1
[2025-06-05 02:18:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 00:54 start_atlas.sh
[2025-06-05 02:18:17] drwxrwx--x 2 boincer umatlas      4096 Jun  5 00:54 shared
[2025-06-05 02:18:17] -rw-r--r-- 2 boincer umatlas    508882 Jun  5 00:54 input.tar.gz
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas         0 Jun  5 00:54 boinc_lockfile
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 00:54 pandaJob.out
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas    987109 Jun  5 00:54 agis_schedconf.cvmfs.json
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas   1598969 Jun  5 00:54 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:18:17] drwx------ 4 boincer umatlas      4096 Jun  5 00:54 pilot3
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas      5868 Jun  5 02:12 init_data.xml
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas 199784090 Jun  5 02:17 HITS.44871837._074719.pool.root.1
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas       530 Jun  5 02:17 boinc_task_state.xml
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas      1044 Jun  5 02:17 memory_monitor_summary.json
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas        95 Jun  5 02:17 pilot_heartbeat.json
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas    360666 Jun  5 02:17 log.44871837._074719.job.log.tgz.1
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas      7747 Jun  5 02:17 heartbeat.json
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 02:18 boinc_mmap_file
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas        27 Jun  5 02:18 wrapper_checkpoint.txt
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas      4734 Jun  5 02:18 pilotlog.txt
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas    474717 Jun  5 02:18 log.44871837._074719.job.log.1
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas       357 Jun  5 02:18 output.list
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas       620 Jun  5 02:18 runtime_log
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas    849920 Jun  5 02:18 result.tar.gz
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas      8661 Jun  5 02:18 runtime_log.err
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas       659 Jun  5 02:18 h2WMDmVXIe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMYSKDmkAZPom.diag
[2025-06-05 02:18:17] -rw-r--r-- 1 boincer umatlas     22553 Jun  5 02:18 stderr.txt
[2025-06-05 02:18:17] HITS file was successfully produced:
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas 199784090 Jun  5 02:17 shared/HITS.pool.root.1
[2025-06-05 02:18:17]  *** Contents of shared directory: ***
[2025-06-05 02:18:17] total 416352
[2025-06-05 02:18:17] -rw-r--r-- 2 boincer umatlas 225168266 Jun  5 00:54 ATLAS.root_0
[2025-06-05 02:18:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 00:54 start_atlas.sh
[2025-06-05 02:18:17] -rw-r--r-- 2 boincer umatlas    508882 Jun  5 00:54 input.tar.gz
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas 199784090 Jun  5 02:17 HITS.pool.root.1
[2025-06-05 02:18:17] -rw------- 1 boincer umatlas    849920 Jun  5 02:18 result.tar.gz
02:18:18 (21704): run_atlas exited; CPU time 54562.449243
02:18:18 (21704): called boinc_finish(0)

</stderr_txt>
]]>

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