Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:35:05 (22425): wrapper (7.7.26015): starting
06:35:05 (22425): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 06:35:05] Arguments: --nthreads 8
[2025-06-05 06:35:05] Threads: 8
[2025-06-05 06:35:05] Checking for CVMFS
[2025-06-05 06:35:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 06:35:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 06:35:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 06:35:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 06:35:08] 2.11.2.0 26010 34209 94836 146806 0 16 14288505 25165824 2745 130560 0 17558493 99.785 20522604 2082 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 06:35:08] CVMFS is ok
[2025-06-05 06:35:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 06:35:08] Checking for apptainer binary...
[2025-06-05 06:35:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 06:35:08] Running /usr/bin/apptainer --version
[2025-06-05 06:35:08] apptainer version 1.3.2-1.el7
[2025-06-05 06:35:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:35:18] cg-vwn216.simple-grid.lan
[2025-06-05 06:35:18] apptainer works
[2025-06-05 06:35:18] Set ATHENA_PROC_NUMBER=8
[2025-06-05 06:35:18] Set ATHENA_CORE_NUMBER=8
[2025-06-05 06:35:18] Starting ATLAS job with PandaID=6667667566
[2025-06-05 06:35:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:23:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:23:50] 2025-06-05 10:15:01,262 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:23:50] 2025-06-05 10:15:01,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:23:50] 2025-06-05 10:15:01,262 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:23:50] 2025-06-05 10:15:01,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:23:50] 2025-06-05 10:15:01,269 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:23:50] 2025-06-05 10:15:01,270 | INFO     | sum of square deviations: 10352419220.5
[2025-06-05 12:23:50] 2025-06-05 10:15:01,273 | INFO     | sum of deviations: 110499747469.99988
[2025-06-05 12:23:50] 2025-06-05 10:15:01,274 | INFO     | mean x: 1749108605.5
[2025-06-05 12:23:50] 2025-06-05 10:15:01,274 | INFO     | mean y: 2449546.9689440993
[2025-06-05 12:23:50] 2025-06-05 10:15:01,274 | INFO     | -- intersect: -18667201970.10117
[2025-06-05 12:23:50] 2025-06-05 10:15:01,274 | INFO     | intersect: -18667201970.10117
[2025-06-05 12:23:50] 2025-06-05 10:15:01,275 | INFO     | chi2: 8.010915604094613
[2025-06-05 12:23:50] 2025-06-05 10:15:01,275 | INFO     | sum of square deviations: 9877610318.0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,279 | INFO     | sum of deviations: 152486329472.99997
[2025-06-05 12:23:50] 2025-06-05 10:15:01,279 | INFO     | mean x: 1749108453.0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,279 | INFO     | mean y: 2462900.716088328
[2025-06-05 12:23:50] 2025-06-05 10:15:01,279 | INFO     | -- intersect: -26999526372.147964
[2025-06-05 12:23:50] 2025-06-05 10:15:01,279 | INFO     | intersect: -26999526372.147964
[2025-06-05 12:23:50] 2025-06-05 10:15:01,280 | INFO     | chi2: 6.459487883626825
[2025-06-05 12:23:50] 2025-06-05 10:15:01,280 | INFO     | current chi2=6.459487883626825 (change=19.36642198146249 %)
[2025-06-05 12:23:50] 2025-06-05 10:15:01,280 | INFO     | right removable region: 316
[2025-06-05 12:23:50] 2025-06-05 10:15:01,281 | INFO     | sum of square deviations: 9877610318.0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,284 | INFO     | sum of deviations: -2735948698.0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,284 | INFO     | mean x: 1749108758.0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,284 | INFO     | mean y: 2485898.3217665614
[2025-06-05 12:23:50] 2025-06-05 10:15:01,284 | INFO     | -- intersect: 486962575.88313144
[2025-06-05 12:23:50] 2025-06-05 10:15:01,285 | INFO     | intersect: 486962575.88313144
[2025-06-05 12:23:50] 2025-06-05 10:15:01,285 | INFO     | chi2: 3.2278403737829136
[2025-06-05 12:23:50] 2025-06-05 10:15:01,285 | INFO     | current chi2=3.2278403737829136 (change=59.70697316879646 %)
[2025-06-05 12:23:50] 2025-06-05 10:15:01,286 | INFO     | sum of square deviations: 9417545878.0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,289 | INFO     | sum of deviations: -59001022954.5
[2025-06-05 12:23:50] 2025-06-05 10:15:01,290 | INFO     | mean x: 1749108910.5
[2025-06-05 12:23:50] 2025-06-05 10:15:01,290 | INFO     | mean y: 2504465.5416666665
[2025-06-05 12:23:50] 2025-06-05 10:15:01,290 | INFO     | -- intersect: 10960689996.595045
[2025-06-05 12:23:50] 2025-06-05 10:15:01,290 | INFO     | intersect: 10960689996.595045
[2025-06-05 12:23:50] 2025-06-05 10:15:01,291 | INFO     | chi2: 1.8064505272059344
[2025-06-05 12:23:50] 2025-06-05 10:15:01,291 | INFO     | current chi2=1.8064505272059344 (change=44.03532027549309 %)
[2025-06-05 12:23:50] 2025-06-05 10:15:01,291 | INFO     | sum of square deviations: 8971993338.0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,295 | INFO     | sum of deviations: -59306589187.0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,295 | INFO     | mean x: 1749109063.0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,295 | INFO     | mean y: 2504549.9022801304
[2025-06-05 12:23:50] 2025-06-05 10:15:01,295 | INFO     | -- intersect: 11564449452.74183
[2025-06-05 12:23:50] 2025-06-05 10:15:01,295 | INFO     | intersect: 11564449452.74183
[2025-06-05 12:23:50] 2025-06-05 10:15:01,296 | INFO     | chi2: 1.7899987238521429
[2025-06-05 12:23:50] 2025-06-05 10:15:01,296 | INFO     | current chi2=1.7899987238521429 (change=0.9107253758694266 %)
[2025-06-05 12:23:50] 2025-06-05 10:15:01,296 | INFO     | left removable region: 30
[2025-06-05 12:23:50] 2025-06-05 10:15:01,297 | INFO     | sum of square deviations: 7253894147.5
[2025-06-05 12:23:50] 2025-06-05 10:15:01,300 | INFO     | sum of deviations: 12248484630.0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,300 | INFO     | mean x: 1749109337.5
[2025-06-05 12:23:50] 2025-06-05 10:15:01,300 | INFO     | mean y: 2508578.3706293707
[2025-06-05 12:23:50] 2025-06-05 10:15:01,300 | INFO     | -- intersect: -2950931105.325587
[2025-06-05 12:23:50] 2025-06-05 10:15:01,301 | INFO     | intersect: -2950931105.325587
[2025-06-05 12:23:50] 2025-06-05 10:15:01,301 | INFO     | chi2: 0.001469770394543847
[2025-06-05 12:23:50] 2025-06-05 10:15:01,301 | INFO     | -- intersect: -2950931105.325587
[2025-06-05 12:23:50] 2025-06-05 10:15:01,301 | INFO     | current memory leak: 1.69 B/s (using 286 data points, chi2=0.00)
[2025-06-05 12:23:50] 2025-06-05 10:15:01,302 | INFO     | ..............................
[2025-06-05 12:23:50] 2025-06-05 10:15:01,303 | INFO     | . Timing measurements:
[2025-06-05 12:23:50] 2025-06-05 10:15:01,303 | INFO     | . get job = 0 s
[2025-06-05 12:23:50] 2025-06-05 10:15:01,303 | INFO     | . initial setup = 7 s
[2025-06-05 12:23:50] 2025-06-05 10:15:01,303 | INFO     | . payload setup = 155 s
[2025-06-05 12:23:50] 2025-06-05 10:15:01,303 | INFO     | . stage-in = 0 s
[2025-06-05 12:23:50] 2025-06-05 10:15:01,303 | INFO     | . payload execution = 19727 s
[2025-06-05 12:23:50] 2025-06-05 10:15:01,303 | INFO     | . stage-out = 3 s
[2025-06-05 12:23:50] 2025-06-05 10:15:01,303 | INFO     | . log creation = 1 s
[2025-06-05 12:23:50] 2025-06-05 10:15:01,303 | INFO     | ..............................
[2025-06-05 12:23:50] 2025-06-05 10:15:01,429 | INFO     | 
[2025-06-05 12:23:50] 2025-06-05 10:15:01,429 | INFO     | job summary report
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | --------------------------------------------------
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | PanDA job id: 6667667566
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | task id: 44871837
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | errors: (none)
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | pilot state: finished 
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | transexitcode: 0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | exeerrorcode: 0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | exeerrordiag: 
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | exitcode: 0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | exitmsg: OK
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | cpuconsumptiontime: 74633 s
[2025-06-05 12:23:50] 2025-06-05 10:15:01,430 | INFO     | nevents: 400
[2025-06-05 12:23:50] 2025-06-05 10:15:01,431 | INFO     | neventsw: 0
[2025-06-05 12:23:50] 2025-06-05 10:15:01,431 | INFO     | pid: 4356
[2025-06-05 12:23:50] 2025-06-05 10:15:01,431 | INFO     | pgrp: 4356
[2025-06-05 12:23:50] 2025-06-05 10:15:01,431 | INFO     | corecount: 8
[2025-06-05 12:23:50] 2025-06-05 10:15:01,431 | INFO     | event service: False
[2025-06-05 12:23:50] 2025-06-05 10:15:01,431 | INFO     | sizes: {0: 2396564, 1: 2397250, 2: 2397449, 13: 2397449, 23: 2397505, 34: 2397533, 45: 2397689, 56: 2397717, 66: 2397745, 77: 2397773, 88: 2397829, 91: 2398343, 99
[2025-06-05 12:23:50] 2025-06-05 10:15:01,431 | INFO     | --------------------------------------------------
[2025-06-05 12:23:50] 2025-06-05 10:15:01,431 | INFO     | 
[2025-06-05 12:23:50] 2025-06-05 10:15:01,431 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-06-05 12:23:50] 2025-06-05 10:15:01,945 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,946 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:23:50] 2025-06-05 10:15:01,947 | INFO     | job 6667667566 has completed (purged errors)
[2025-06-05 12:23:50] 2025-06-05 10:15:01,948 | INFO     | overall cleanup function is called
[2025-06-05 12:23:50] 2025-06-05 10:15:02,955 | INFO     | --- collectZombieJob: --- 10, [4356]
[2025-06-05 12:23:50] 2025-06-05 10:15:02,956 | INFO     | zombie collector waiting for pid 4356
[2025-06-05 12:23:50] 2025-06-05 10:15:02,956 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:23:50] 2025-06-05 10:15:02,956 | INFO     | collected zombie processes
[2025-06-05 12:23:50] 2025-06-05 10:15:02,956 | INFO     | will attempt to kill all subprocesses of pid=4356
[2025-06-05 12:23:50] 2025-06-05 10:15:03,089 | INFO     | process IDs to be killed: [4356] (in reverse order)
[2025-06-05 12:23:50] 2025-06-05 10:15:04,006 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:23:50] 2025-06-05 10:15:04,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:23:50] 2025-06-05 10:15:04,011 | INFO     | did not find any defunct processes belonging to 4356
[2025-06-05 12:23:50] 2025-06-05 10:15:04,014 | INFO     | did not find any defunct processes belonging to 4356
[2025-06-05 12:23:50] 2025-06-05 10:15:04,015 | INFO     | ready for new job
[2025-06-05 12:23:50] 2025-06-05 10:15:04,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:23:50] 2025-06-05 10:15:04,018 | INFO     | **************************************
[2025-06-05 12:23:50] 2025-06-05 10:15:04,018 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:23:50] 2025-06-05 10:15:04,018 | INFO     | **************************************
[2025-06-05 12:23:50] 2025-06-05 10:15:04,018 | INFO     | 
[2025-06-05 12:23:50] 2025-06-05 10:15:04,019 | INFO     | pilot is running in a VM
[2025-06-05 12:23:50] 2025-06-05 10:15:04,019 | INFO     | architecture information:
[2025-06-05 12:23:50] 2025-06-05 10:15:04,036 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:23:50] 2025-06-05 10:15:04,155 | INFO     | cat /etc/os-release:
[2025-06-05 12:23:50] NAME="CentOS Linux"
[2025-06-05 12:23:50] VERSION="7 (Core)"
[2025-06-05 12:23:50] ID="centos"
[2025-06-05 12:23:50] ID_LIKE="rhel fedora"
[2025-06-05 12:23:50] VERSION_ID="7"
[2025-06-05 12:23:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:23:50] ANSI_COLOR="0;31"
[2025-06-05 12:23:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:23:50] HOME_URL="https://www.centos.org/"
[2025-06-05 12:23:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:23:50] 
[2025-06-05 12:23:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:23:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:23:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:23:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:23:50] 
[2025-06-05 12:23:50] 2025-06-05 10:15:04,156 | INFO     | **************************************
[2025-06-05 12:23:50] 2025-06-05 10:15:04,660 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-06-05 12:23:50] 2025-06-05 10:15:04,920 | INFO     | sufficient remaining disk space (497207476224 B)
[2025-06-05 12:23:50] 2025-06-05 10:15:04,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:23:50] 2025-06-05 10:15:04,921 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:23:50] 2025-06-05 10:15:04,921 | INFO     | update_server=False
[2025-06-05 12:23:50] 2025-06-05 10:15:04,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:23:50] 2025-06-05 10:15:04,923 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:23:50] 2025-06-05 10:15:05,182 | INFO     | all data control threads have been joined
[2025-06-05 12:23:50] 2025-06-05 10:15:05,382 | INFO     | all job control threads have been joined
[2025-06-05 12:23:50] 2025-06-05 10:15:05,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:23:50] 2025-06-05 10:15:05,408 | INFO     | aborting loop
[2025-06-05 12:23:50] 2025-06-05 10:15:05,461 | INFO     | all payload control threads have been joined
[2025-06-05 12:23:50] 2025-06-05 10:15:05,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:23:50] 2025-06-05 10:15:05,815 | INFO     | PID=26143 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 12:23:50] 2025-06-05 10:15:05,815 | INFO     | .. there are 9 such processes running
[2025-06-05 12:23:50] 2025-06-05 10:15:05,815 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:23:50] 2025-06-05 10:15:05,815 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:23:50] 2025-06-05 10:15:05,815 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:23:50] 2025-06-05 10:15:05,928 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:06,061 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:06,188 | INFO     | [data] control thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:06,388 | INFO     | [job] control thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:06,414 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:06,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:23:50] 2025-06-05 10:15:06,468 | INFO     | [payload] control thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:06,637 | INFO     | [job] validate thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:06,822 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:06,834 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:06,959 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:07,221 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:07,343 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:07,351 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:07,451 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:07,578 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:08,932 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:23:50] 2025-06-05 10:15:10,241 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140287531013952)>', '<ExcThread(monitor, started 140286718113536)>']
[2025-06-05 12:23:50] 2025-06-05 10:15:10,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:23:50] 2025-06-05 10:15:10,846 | INFO     | [monitor] control thread has ended
[2025-06-05 12:23:50] 2025-06-05 10:15:15,266 | INFO     | all workflow threads have been joined
[2025-06-05 12:23:50] 2025-06-05 10:15:15,267 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:23:50] 2025-06-05 10:15:15,267 | INFO     | traces error code: 0
[2025-06-05 12:23:50] 2025-06-05 10:15:15,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:23:50] 2025-06-05 10:15:15,740 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:23:50] 2025-06-05 10:15:15,840 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:23:50] 2025-06-05 10:15:15,938 [wrapper] pilotpid: 26143
[2025-06-05 12:23:50] 2025-06-05 10:15:16,028 [wrapper] Pilot exit status: 0
[2025-06-05 12:23:50] 2025-06-05 10:15:16,477 [wrapper] pandaids: 6667667566
[2025-06-05 12:23:50] 2025-06-05 10:15:17,414 [wrapper] cleanup supervisor_pilot 16282 26144
[2025-06-05 12:23:50] 2025-06-05 10:15:17,525 [wrapper] Test setup, not cleaning
[2025-06-05 12:23:50] 2025-06-05 10:15:17,607 [wrapper] apfmon messages muted
[2025-06-05 12:23:50] 2025-06-05 10:15:17,668 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:23:50] 2025-06-05 10:15:17,768 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:23:50]  *** Error codes and diagnostics ***
[2025-06-05 12:23:50]     "exeErrorCode": 0,
[2025-06-05 12:23:50]     "exeErrorDiag": "",
[2025-06-05 12:23:50]     "pilotErrorCode": 0,
[2025-06-05 12:23:50]     "pilotErrorDiag": "",
[2025-06-05 12:23:50]  *** Listing of results directory ***
[2025-06-05 12:23:50] total 425924
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc      5111 May 28 00:40 queuedata.json
[2025-06-05 12:23:50] -rwx------. 1 boinc boinc     37140 May 28 00:42 runpilot2-wrapper.sh
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc    495897 May 28 00:42 pilot3.tar.gz
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc       100 Jun  5 06:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:23:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 06:35 run_atlas
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc       105 Jun  5 06:35 job.xml
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc      6392 Jun  5 06:35 init_data.xml
[2025-06-05 12:23:50] -rw-r--r--. 2 boinc boinc 224715679 Jun  5 06:35 EVNT.44871834._002920.pool.root.1
[2025-06-05 12:23:50] -rw-r--r--. 2 boinc boinc     15093 Jun  5 06:35 start_atlas.sh
[2025-06-05 12:23:50] drwxrwx--x. 2 boinc boinc        68 Jun  5 06:35 shared
[2025-06-05 12:23:50] -rw-r--r--. 2 boinc boinc    508875 Jun  5 06:35 input.tar.gz
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc         0 Jun  5 06:35 boinc_lockfile
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc      2559 Jun  5 06:35 pandaJob.out
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc    987109 Jun  5 06:38 agis_schedconf.cvmfs.json
[2025-06-05 12:23:50] drwx------. 4 boinc boinc      4096 Jun  5 06:38 pilot3
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc 203346842 Jun  5 12:12 HITS.44871837._074478.pool.root.1
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc       531 Jun  5 12:12 boinc_task_state.xml
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc      1013 Jun  5 12:13 memory_monitor_summary.json
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc   1598969 Jun  5 12:13 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc    433284 Jun  5 12:13 log.44871837._074478.job.log.tgz.1
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc        95 Jun  5 12:14 pilot_heartbeat.json
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc      7690 Jun  5 12:15 heartbeat.json
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc      4809 Jun  5 12:15 pilotlog.txt
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc   1700992 Jun  5 12:15 log.44871837._074478.job.log.1
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc       357 Jun  5 12:15 output.list
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc       620 Jun  5 12:15 runtime_log
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc   2150400 Jun  5 12:15 result.tar.gz
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc      8673 Jun  5 12:15 runtime_log.err
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc       657 Jun  5 12:15 8iRMDmeBIe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIYaKDmXeikzn.diag
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc      8192 Jun  5 12:23 boinc_mmap_file
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc        28 Jun  5 12:23 wrapper_checkpoint.txt
[2025-06-05 12:23:50] -rw-r--r--. 1 boinc boinc     20580 Jun  5 12:23 stderr.txt
[2025-06-05 12:23:50] HITS file was successfully produced:
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc 203346842 Jun  5 12:12 shared/HITS.pool.root.1
[2025-06-05 12:23:50]  *** Contents of shared directory: ***
[2025-06-05 12:23:50] total 420652
[2025-06-05 12:23:50] -rw-r--r--. 2 boinc boinc 224715679 Jun  5 06:35 ATLAS.root_0
[2025-06-05 12:23:50] -rw-r--r--. 2 boinc boinc     15093 Jun  5 06:35 start_atlas.sh
[2025-06-05 12:23:50] -rw-r--r--. 2 boinc boinc    508875 Jun  5 06:35 input.tar.gz
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc 203346842 Jun  5 12:12 HITS.pool.root.1
[2025-06-05 12:23:50] -rw-------. 1 boinc boinc   2150400 Jun  5 12:15 result.tar.gz
12:23:52 (22425): run_atlas exited; CPU time 74888.824520
12:23:52 (22425): called boinc_finish(0)

</stderr_txt>
]]>

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