Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:23:56 (32436): wrapper (7.7.26015): starting
12:23:56 (32436): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 12:23:56] Arguments: --nthreads 8
[2025-06-05 12:23:56] Threads: 8
[2025-06-05 12:23:56] Checking for CVMFS
[2025-06-05 12:23:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 12:23:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 12:23:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 12:23:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 12:23:58] 2.11.2.0 26010 34558 94576 146816 0 16 14582334 25165825 2746 130560 0 17710061 99.787 20601822 2085 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 12:23:58] CVMFS is ok
[2025-06-05 12:23:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 12:23:58] Checking for apptainer binary...
[2025-06-05 12:23:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 12:23:58] Running /usr/bin/apptainer --version
[2025-06-05 12:23:59] apptainer version 1.3.2-1.el7
[2025-06-05 12:23:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 12:24:10] cg-vwn216.simple-grid.lan
[2025-06-05 12:24:10] apptainer works
[2025-06-05 12:24:11] Set ATHENA_PROC_NUMBER=8
[2025-06-05 12:24:11] Set ATHENA_CORE_NUMBER=8
[2025-06-05 12:24:11] Starting ATLAS job with PandaID=6667435811
[2025-06-05 12:24:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:00:35]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:00:35] 2025-06-05 15:50:11,485 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6667435811/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:00:35] 2025-06-05 15:50:11,487 | INFO     | extracted standard info from prmon json
[2025-06-05 18:00:35] 2025-06-05 15:50:11,487 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:00:35] 2025-06-05 15:50:11,487 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:00:35] 2025-06-05 15:50:11,487 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:00:35] 2025-06-05 15:50:11,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:00:35] 2025-06-05 15:50:11,494 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:00:35] 2025-06-05 15:50:11,495 | INFO     | sum of square deviations: 9059954057.0
[2025-06-05 18:00:35] 2025-06-05 15:50:11,501 | INFO     | sum of deviations: 103876303938.49995
[2025-06-05 18:00:35] 2025-06-05 15:50:11,501 | INFO     | mean x: 1749129120.5
[2025-06-05 18:00:35] 2025-06-05 15:50:11,501 | INFO     | mean y: 2463264.775974026
[2025-06-05 18:00:35] 2025-06-05 15:50:11,501 | INFO     | -- intersect: -20052060964.114285
[2025-06-05 18:00:35] 2025-06-05 15:50:11,502 | INFO     | intersect: -20052060964.114285
[2025-06-05 18:00:35] 2025-06-05 15:50:11,502 | INFO     | chi2: 8.227622691076048
[2025-06-05 18:00:35] 2025-06-05 15:50:11,503 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 18:00:35] 2025-06-05 15:50:11,506 | INFO     | sum of deviations: 122589913676.00005
[2025-06-05 18:00:35] 2025-06-05 15:50:11,506 | INFO     | mean x: 1749128968.0
[2025-06-05 18:00:35] 2025-06-05 15:50:11,506 | INFO     | mean y: 2469744.7524752477
[2025-06-05 18:00:35] 2025-06-05 15:50:11,506 | INFO     | -- intersect: -24856034459.30927
[2025-06-05 18:00:35] 2025-06-05 15:50:11,506 | INFO     | intersect: -24856034459.30927
[2025-06-05 18:00:35] 2025-06-05 15:50:11,507 | INFO     | chi2: 7.519224505924981
[2025-06-05 18:00:35] 2025-06-05 15:50:11,507 | INFO     | current chi2=7.519224505924981 (change=8.609998437573212 %)
[2025-06-05 18:00:35] 2025-06-05 15:50:11,507 | INFO     | right removable region: 302
[2025-06-05 18:00:35] 2025-06-05 15:50:11,508 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 18:00:35] 2025-06-05 15:50:11,511 | INFO     | sum of deviations: -6848312742.0
[2025-06-05 18:00:35] 2025-06-05 15:50:11,511 | INFO     | mean x: 1749129273.0
[2025-06-05 18:00:35] 2025-06-05 15:50:11,511 | INFO     | mean y: 2502146.676567657
[2025-06-05 18:00:35] 2025-06-05 15:50:11,511 | INFO     | -- intersect: 1391187689.131868
[2025-06-05 18:00:35] 2025-06-05 15:50:11,511 | INFO     | intersect: 1391187689.131868
[2025-06-05 18:00:35] 2025-06-05 15:50:11,512 | INFO     | chi2: 3.1206216578312365
[2025-06-05 18:00:35] 2025-06-05 15:50:11,512 | INFO     | current chi2=3.1206216578312365 (change=62.07140537428914 %)
[2025-06-05 18:00:35] 2025-06-05 15:50:11,512 | INFO     | sum of square deviations: 8205826414.5
[2025-06-05 18:00:35] 2025-06-05 15:50:11,515 | INFO     | sum of deviations: -74215315414.99998
[2025-06-05 18:00:35] 2025-06-05 15:50:11,515 | INFO     | mean x: 1749129425.5
[2025-06-05 18:00:35] 2025-06-05 15:50:11,515 | INFO     | mean y: 2526526.322147651
[2025-06-05 18:00:35] 2025-06-05 15:50:11,516 | INFO     | -- intersect: 15822041278.152292
[2025-06-05 18:00:35] 2025-06-05 15:50:11,516 | INFO     | intersect: 15822041278.152292
[2025-06-05 18:00:35] 2025-06-05 15:50:11,516 | INFO     | chi2: 1.0875327593767903
[2025-06-05 18:00:35] 2025-06-05 15:50:11,516 | INFO     | current chi2=1.0875327593767903 (change=65.15012460265363 %)
[2025-06-05 18:00:35] 2025-06-05 15:50:11,517 | INFO     | sum of square deviations: 7799669962.0
[2025-06-05 18:00:35] 2025-06-05 15:50:11,519 | INFO     | sum of deviations: -81733888776.00002
[2025-06-05 18:00:35] 2025-06-05 15:50:11,520 | INFO     | mean x: 1749129578.0
[2025-06-05 18:00:35] 2025-06-05 15:50:11,520 | INFO     | mean y: 2529336.9249146758
[2025-06-05 18:00:35] 2025-06-05 15:50:11,521 | INFO     | -- intersect: 18331915462.18156
[2025-06-05 18:00:35] 2025-06-05 15:50:11,521 | INFO     | intersect: 18331915462.18156
[2025-06-05 18:00:35] 2025-06-05 15:50:11,521 | INFO     | chi2: 1.0368832825473002
[2025-06-05 18:00:35] 2025-06-05 15:50:11,521 | INFO     | current chi2=1.0368832825473002 (change=4.657282862772308 %)
[2025-06-05 18:00:35] 2025-06-05 15:50:11,521 | INFO     | left removable region: 30
[2025-06-05 18:00:35] 2025-06-05 15:50:11,522 | INFO     | sum of square deviations: 6239923508.0
[2025-06-05 18:00:35] 2025-06-05 15:50:11,524 | INFO     | sum of deviations: -43526947994.5
[2025-06-05 18:00:35] 2025-06-05 15:50:11,525 | INFO     | mean x: 1749129852.5
[2025-06-05 18:00:35] 2025-06-05 15:50:11,525 | INFO     | mean y: 2529980.716911765
[2025-06-05 18:00:35] 2025-06-05 15:50:11,525 | INFO     | -- intersect: 12203686617.939419
[2025-06-05 18:00:35] 2025-06-05 15:50:11,525 | INFO     | intersect: 12203686617.939419
[2025-06-05 18:00:35] 2025-06-05 15:50:11,525 | INFO     | chi2: 0.2056817433321939
[2025-06-05 18:00:35] 2025-06-05 15:50:11,526 | INFO     | -- intersect: 12203686617.939419
[2025-06-05 18:00:35] 2025-06-05 15:50:11,526 | INFO     | current memory leak: -6.98 B/s (using 272 data points, chi2=0.21)
[2025-06-05 18:00:35] 2025-06-05 15:50:11,527 | INFO     | ..............................
[2025-06-05 18:00:35] 2025-06-05 15:50:11,527 | INFO     | . Timing measurements:
[2025-06-05 18:00:35] 2025-06-05 15:50:11,527 | INFO     | . get job = 0 s
[2025-06-05 18:00:35] 2025-06-05 15:50:11,528 | INFO     | . initial setup = 8 s
[2025-06-05 18:00:35] 2025-06-05 15:50:11,528 | INFO     | . payload setup = 159 s
[2025-06-05 18:00:35] 2025-06-05 15:50:11,528 | INFO     | . stage-in = 0 s
[2025-06-05 18:00:35] 2025-06-05 15:50:11,528 | INFO     | . payload execution = 18897 s
[2025-06-05 18:00:35] 2025-06-05 15:50:11,528 | INFO     | . stage-out = 4 s
[2025-06-05 18:00:35] 2025-06-05 15:50:11,528 | INFO     | . log creation = 1 s
[2025-06-05 18:00:35] 2025-06-05 15:50:11,528 | INFO     | ..............................
[2025-06-05 18:00:35] 2025-06-05 15:50:12,120 | INFO     | 
[2025-06-05 18:00:35] 2025-06-05 15:50:12,120 | INFO     | job summary report
[2025-06-05 18:00:35] 2025-06-05 15:50:12,120 | INFO     | --------------------------------------------------
[2025-06-05 18:00:35] 2025-06-05 15:50:12,120 | INFO     | PanDA job id: 6667435811
[2025-06-05 18:00:35] 2025-06-05 15:50:12,120 | INFO     | task id: 44871837
[2025-06-05 18:00:35] 2025-06-05 15:50:12,120 | INFO     | errors: (none)
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | pilot state: finished 
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | transexitcode: 0
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | exeerrorcode: 0
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | exeerrordiag: 
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | exitcode: 0
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | exitmsg: OK
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | cpuconsumptiontime: 70603 s
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | nevents: 400
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | neventsw: 0
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | pid: 13173
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | pgrp: 13173
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | corecount: 8
[2025-06-05 18:00:35] 2025-06-05 15:50:12,121 | INFO     | event service: False
[2025-06-05 18:00:35] 2025-06-05 15:50:12,122 | INFO     | sizes: {0: 2396564, 1: 2397250, 2: 2397449, 13: 2397449, 23: 2397505, 34: 2397533, 45: 2397689, 56: 2397717, 66: 2397745, 77: 2397773, 88: 2397829, 93: 2398343, 99
[2025-06-05 18:00:35] 2025-06-05 15:50:12,122 | INFO     | --------------------------------------------------
[2025-06-05 18:00:35] 2025-06-05 15:50:12,122 | INFO     | 
[2025-06-05 18:00:35] 2025-06-05 15:50:12,122 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-06-05 18:00:35] 2025-06-05 15:50:12,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,611 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,611 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,611 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,612 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,612 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,612 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,612 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:00:35] 2025-06-05 15:50:12,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,612 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:00:35] 2025-06-05 15:50:12,612 | INFO     | job 6667435811 has completed (purged errors)
[2025-06-05 18:00:35] 2025-06-05 15:50:12,613 | INFO     | overall cleanup function is called
[2025-06-05 18:00:35] 2025-06-05 15:50:13,622 | INFO     | --- collectZombieJob: --- 10, [13173]
[2025-06-05 18:00:35] 2025-06-05 15:50:13,623 | INFO     | zombie collector waiting for pid 13173
[2025-06-05 18:00:35] 2025-06-05 15:50:13,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:00:35] 2025-06-05 15:50:13,623 | INFO     | collected zombie processes
[2025-06-05 18:00:35] 2025-06-05 15:50:13,623 | INFO     | will attempt to kill all subprocesses of pid=13173
[2025-06-05 18:00:35] 2025-06-05 15:50:13,755 | INFO     | process IDs to be killed: [13173] (in reverse order)
[2025-06-05 18:00:35] 2025-06-05 15:50:14,596 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:00:35] 2025-06-05 15:50:14,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:00:35] 2025-06-05 15:50:14,600 | INFO     | did not find any defunct processes belonging to 13173
[2025-06-05 18:00:35] 2025-06-05 15:50:14,611 | INFO     | did not find any defunct processes belonging to 13173
[2025-06-05 18:00:35] 2025-06-05 15:50:14,612 | INFO     | ready for new job
[2025-06-05 18:00:35] 2025-06-05 15:50:14,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:00:35] 2025-06-05 15:50:14,615 | INFO     | **************************************
[2025-06-05 18:00:35] 2025-06-05 15:50:14,615 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:00:35] 2025-06-05 15:50:14,615 | INFO     | **************************************
[2025-06-05 18:00:35] 2025-06-05 15:50:14,615 | INFO     | 
[2025-06-05 18:00:35] 2025-06-05 15:50:14,616 | INFO     | pilot is running in a VM
[2025-06-05 18:00:35] 2025-06-05 15:50:14,616 | INFO     | architecture information:
[2025-06-05 18:00:35] 2025-06-05 15:50:14,632 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:00:35] 2025-06-05 15:50:14,864 | INFO     | cat /etc/os-release:
[2025-06-05 18:00:35] NAME="CentOS Linux"
[2025-06-05 18:00:35] VERSION="7 (Core)"
[2025-06-05 18:00:35] ID="centos"
[2025-06-05 18:00:35] ID_LIKE="rhel fedora"
[2025-06-05 18:00:35] VERSION_ID="7"
[2025-06-05 18:00:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:00:35] ANSI_COLOR="0;31"
[2025-06-05 18:00:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:00:35] HOME_URL="https://www.centos.org/"
[2025-06-05 18:00:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:00:35] 
[2025-06-05 18:00:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:00:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:00:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:00:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:00:35] 
[2025-06-05 18:00:35] 2025-06-05 15:50:14,865 | INFO     | **************************************
[2025-06-05 18:00:35] 2025-06-05 15:50:15,368 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-06-05 18:00:35] 2025-06-05 15:50:15,633 | INFO     | sufficient remaining disk space (497311285248 B)
[2025-06-05 18:00:35] 2025-06-05 15:50:15,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:00:35] 2025-06-05 15:50:15,634 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:00:35] 2025-06-05 15:50:15,634 | INFO     | update_server=False
[2025-06-05 18:00:35] 2025-06-05 15:50:15,634 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:00:35] 2025-06-05 15:50:15,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:00:35] 2025-06-05 15:50:15,637 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:00:35] 2025-06-05 15:50:15,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:00:35] 2025-06-05 15:50:15,647 | INFO     | aborting loop
[2025-06-05 18:00:35] 2025-06-05 15:50:15,719 | INFO     | all data control threads have been joined
[2025-06-05 18:00:35] 2025-06-05 15:50:15,742 | INFO     | all job control threads have been joined
[2025-06-05 18:00:35] 2025-06-05 15:50:15,877 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:00:35] 2025-06-05 15:50:15,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:00:35] 2025-06-05 15:50:15,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:00:35] 2025-06-05 15:50:15,892 | INFO     | all payload control threads have been joined
[2025-06-05 18:00:35] 2025-06-05 15:50:16,640 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:16,653 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:16,725 | INFO     | [data] control thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:16,738 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:00:35] 2025-06-05 15:50:16,748 | INFO     | [job] control thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:16,790 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:16,898 | INFO     | [payload] control thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:17,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:17,152 | INFO     | [job] validate thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:17,369 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:17,642 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:17,673 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:17,743 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:17,866 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:18,085 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:18,107 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:19,647 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:00:35] 2025-06-05 15:50:20,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530343651136)>', '<ExcThread(monitor, started 140529895458560)>']
[2025-06-05 18:00:35] 2025-06-05 15:50:20,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:00:35] 2025-06-05 15:50:20,906 | INFO     | [monitor] control thread has ended
[2025-06-05 18:00:35] 2025-06-05 15:50:25,226 | INFO     | all workflow threads have been joined
[2025-06-05 18:00:35] 2025-06-05 15:50:25,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:00:35] 2025-06-05 15:50:25,227 | INFO     | traces error code: 0
[2025-06-05 18:00:35] 2025-06-05 15:50:25,227 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:00:35] 2025-06-05 15:50:25,637 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:00:35] 2025-06-05 15:50:25,725 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:00:35] 2025-06-05 15:50:25,817 [wrapper] pilotpid: 5855
[2025-06-05 18:00:35] 2025-06-05 15:50:25,917 [wrapper] Pilot exit status: 0
[2025-06-05 18:00:35] 2025-06-05 15:50:26,383 [wrapper] pandaids: 6667435811
[2025-06-05 18:00:35] 2025-06-05 15:50:27,401 [wrapper] cleanup supervisor_pilot 15069 5856
[2025-06-05 18:00:35] 2025-06-05 15:50:27,513 [wrapper] Test setup, not cleaning
[2025-06-05 18:00:35] 2025-06-05 15:50:27,600 [wrapper] apfmon messages muted
[2025-06-05 18:00:35] 2025-06-05 15:50:27,677 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:00:35] 2025-06-05 15:50:27,745 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:00:35]  *** Error codes and diagnostics ***
[2025-06-05 18:00:35]     "exeErrorCode": 0,
[2025-06-05 18:00:35]     "exeErrorDiag": "",
[2025-06-05 18:00:35]     "pilotErrorCode": 0,
[2025-06-05 18:00:35]     "pilotErrorDiag": "",
[2025-06-05 18:00:35]  *** Listing of results directory ***
[2025-06-05 18:00:35] total 415492
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc    495897 May 27 21:34 pilot3.tar.gz
[2025-06-05 18:00:35] -rwx------. 1 boinc boinc     37140 May 27 21:40 runpilot2-wrapper.sh
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc      5111 May 27 21:40 queuedata.json
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc       100 Jun  5 12:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:00:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 12:23 run_atlas
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc       105 Jun  5 12:23 job.xml
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc      6392 Jun  5 12:23 init_data.xml
[2025-06-05 18:00:35] -rw-r--r--. 2 boinc boinc 222893914 Jun  5 12:23 EVNT.44871834._002845.pool.root.1
[2025-06-05 18:00:35] -rw-r--r--. 2 boinc boinc     15093 Jun  5 12:23 start_atlas.sh
[2025-06-05 18:00:35] drwxrwx--x. 2 boinc boinc        68 Jun  5 12:23 shared
[2025-06-05 18:00:35] -rw-r--r--. 2 boinc boinc    508881 Jun  5 12:23 input.tar.gz
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc         0 Jun  5 12:23 boinc_lockfile
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc      2559 Jun  5 12:24 pandaJob.out
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc    982836 Jun  5 12:27 agis_schedconf.cvmfs.json
[2025-06-05 18:00:35] drwx------. 4 boinc boinc      4096 Jun  5 12:27 pilot3
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc 194619039 Jun  5 17:47 HITS.44871837._072470.pool.root.1
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc       531 Jun  5 17:47 boinc_task_state.xml
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc      1018 Jun  5 17:48 memory_monitor_summary.json
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc   1598969 Jun  5 17:48 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc    428982 Jun  5 17:48 log.44871837._072470.job.log.tgz.1
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc        95 Jun  5 17:49 pilot_heartbeat.json
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc      7689 Jun  5 17:50 heartbeat.json
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc      4417 Jun  5 17:50 pilotlog.txt
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc   1639917 Jun  5 17:50 log.44871837._072470.job.log.1
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc       357 Jun  5 17:50 output.list
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc       620 Jun  5 17:50 runtime_log
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc   2088960 Jun  5 17:50 result.tar.gz
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc      8673 Jun  5 17:50 runtime_log.err
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc       657 Jun  5 17:50 3o5NDmqKFe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeFaKDmpX2Gzm.diag
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc      8192 Jun  5 18:00 boinc_mmap_file
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc        28 Jun  5 18:00 wrapper_checkpoint.txt
[2025-06-05 18:00:35] -rw-r--r--. 1 boinc boinc     20529 Jun  5 18:00 stderr.txt
[2025-06-05 18:00:35] HITS file was successfully produced:
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc 194619039 Jun  5 17:47 shared/HITS.pool.root.1
[2025-06-05 18:00:35]  *** Contents of shared directory: ***
[2025-06-05 18:00:35] total 410288
[2025-06-05 18:00:35] -rw-r--r--. 2 boinc boinc 222893914 Jun  5 12:23 ATLAS.root_0
[2025-06-05 18:00:35] -rw-r--r--. 2 boinc boinc     15093 Jun  5 12:23 start_atlas.sh
[2025-06-05 18:00:35] -rw-r--r--. 2 boinc boinc    508881 Jun  5 12:23 input.tar.gz
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc 194619039 Jun  5 17:47 HITS.pool.root.1
[2025-06-05 18:00:35] -rw-------. 1 boinc boinc   2088960 Jun  5 17:50 result.tar.gz
18:00:37 (32436): run_atlas exited; CPU time 70845.398585
18:00:37 (32436): called boinc_finish(0)

</stderr_txt>
]]>

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