Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:17:54 (55925): wrapper (7.7.26015): starting
00:17:54 (55925): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 00:17:54] Arguments: --nthreads 8
[2025-06-05 00:17:54] Threads: 8
[2025-06-05 00:17:54] Checking for CVMFS
[2025-06-05 00:17:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:17:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:17:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:17:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:17:54] 2.11.2.0 39063 13787 275212 146806 1 16 11747083 18432000 18630 130560 1 116997490 99.297 155685459 49172 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 00:17:54] CVMFS is ok
[2025-06-05 00:17:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:17:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:17:54] Further information can be found at the LHC@home message board.
[2025-06-05 00:17:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:17:54] Checking for apptainer binary...
[2025-06-05 00:17:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:17:54] Running /usr/bin/apptainer --version
[2025-06-05 00:17:54] apptainer version 1.3.2-1.el7
[2025-06-05 00:17:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:17:56] c-212-9.aglt2.org
[2025-06-05 00:17:56] apptainer works
[2025-06-05 00:17:56] Set ATHENA_PROC_NUMBER=8
[2025-06-05 00:17:56] Set ATHENA_CORE_NUMBER=8
[2025-06-05 00:17:56] Starting ATLAS job with PandaID=6667667527
[2025-06-05 00:17:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:22:32]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:22:32] 2025-06-05 06:22:14,609 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667667527/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:22:32] 2025-06-05 06:22:14,801 | INFO     | number of running child processes to parent process 70865: 1
[2025-06-05 02:22:32] 2025-06-05 06:22:14,802 | INFO     | maximum number of monitored processes: 6
[2025-06-05 02:22:32] 2025-06-05 06:22:17,305 | INFO     | monitor loop #542: job 0:6667667527 is in state 'finished'
[2025-06-05 02:22:32] 2025-06-05 06:22:17,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:22:32] 2025-06-05 06:22:17,591 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 02:22:32] 2025-06-05 06:22:17,591 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667667527/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:22:32] 2025-06-05 06:22:17,591 | INFO     | extracted standard info from prmon json
[2025-06-05 02:22:32] 2025-06-05 06:22:17,591 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:22:32] 2025-06-05 06:22:17,592 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:22:32] 2025-06-05 06:22:17,592 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:22:32] 2025-06-05 06:22:17,592 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:22:32] 2025-06-05 06:22:17,594 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:22:32] 2025-06-05 06:22:17,594 | INFO     | sum of square deviations: 549294020.0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,595 | INFO     | sum of deviations: -8289980520.0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,595 | INFO     | mean x: 1749100806.0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,595 | INFO     | mean y: 2587375.917355372
[2025-06-05 02:22:32] 2025-06-05 06:22:17,595 | INFO     | -- intersect: 26400128731.376312
[2025-06-05 02:22:32] 2025-06-05 06:22:17,595 | INFO     | intersect: 26400128731.376312
[2025-06-05 02:22:32] 2025-06-05 06:22:17,595 | INFO     | chi2: 1.6868309519030833
[2025-06-05 02:22:32] 2025-06-05 06:22:17,595 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,596 | INFO     | sum of deviations: -6981062161.99999
[2025-06-05 02:22:32] 2025-06-05 06:22:17,596 | INFO     | mean x: 1749100653.5
[2025-06-05 02:22:32] 2025-06-05 06:22:17,596 | INFO     | mean y: 2590433.5517241377
[2025-06-05 02:22:32] 2025-06-05 06:22:17,596 | INFO     | -- intersect: 25232528933.5476
[2025-06-05 02:22:32] 2025-06-05 06:22:17,596 | INFO     | intersect: 25232528933.5476
[2025-06-05 02:22:32] 2025-06-05 06:22:17,596 | INFO     | chi2: 1.6883470120876
[2025-06-05 02:22:32] 2025-06-05 06:22:17,596 | INFO     | current chi2=1.6883470120876 (change=-0.089876237023417 %)
[2025-06-05 02:22:32] 2025-06-05 06:22:17,597 | INFO     | right removable region: 115
[2025-06-05 02:22:32] 2025-06-05 06:22:17,597 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,597 | INFO     | sum of deviations: -27671199481.0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,597 | INFO     | mean x: 1749100958.5
[2025-06-05 02:22:32] 2025-06-05 06:22:17,597 | INFO     | mean y: 2631792.5344827585
[2025-06-05 02:22:32] 2025-06-05 06:22:17,597 | INFO     | -- intersect: 100007869772.76668
[2025-06-05 02:22:32] 2025-06-05 06:22:17,598 | INFO     | intersect: 100007869772.76668
[2025-06-05 02:22:32] 2025-06-05 06:22:17,598 | INFO     | chi2: 0.09644801418166636
[2025-06-05 02:22:32] 2025-06-05 06:22:17,598 | INFO     | current chi2=0.09644801418166636 (change=94.28229520730257 %)
[2025-06-05 02:22:32] 2025-06-05 06:22:17,598 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,598 | INFO     | sum of deviations: -25819983131.999992
[2025-06-05 02:22:32] 2025-06-05 06:22:17,598 | INFO     | mean x: 1749101111.0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,599 | INFO     | mean y: 2627052.2882882883
[2025-06-05 02:22:32] 2025-06-05 06:22:17,599 | INFO     | -- intersect: 106504871252.36935
[2025-06-05 02:22:32] 2025-06-05 06:22:17,599 | INFO     | intersect: 106504871252.36935
[2025-06-05 02:22:32] 2025-06-05 06:22:17,599 | INFO     | chi2: 0.09029337288770195
[2025-06-05 02:22:32] 2025-06-05 06:22:17,599 | INFO     | current chi2=0.09029337288770195 (change=6.381304318377906 %)
[2025-06-05 02:22:32] 2025-06-05 06:22:17,599 | INFO     | left removable region: 20
[2025-06-05 02:22:32] 2025-06-05 06:22:17,599 | INFO     | sum of square deviations: 265828240.0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,599 | INFO     | sum of deviations: -18535875043.999996
[2025-06-05 02:22:32] 2025-06-05 06:22:17,600 | INFO     | mean x: 1749101233.0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,600 | INFO     | mean y: 2616796.9684210527
[2025-06-05 02:22:32] 2025-06-05 06:22:17,600 | INFO     | -- intersect: 121965286730.73589
[2025-06-05 02:22:32] 2025-06-05 06:22:17,600 | INFO     | intersect: 121965286730.73589
[2025-06-05 02:22:32] 2025-06-05 06:22:17,600 | INFO     | chi2: 0.08015340014279458
[2025-06-05 02:22:32] 2025-06-05 06:22:17,600 | INFO     | -- intersect: 121965286730.73589
[2025-06-05 02:22:32] 2025-06-05 06:22:17,600 | INFO     | current memory leak: -69.73 B/s (using 95 data points, chi2=0.08)
[2025-06-05 02:22:32] 2025-06-05 06:22:17,600 | INFO     | ..............................
[2025-06-05 02:22:32] 2025-06-05 06:22:17,601 | INFO     | . Timing measurements:
[2025-06-05 02:22:32] 2025-06-05 06:22:17,601 | INFO     | . get job = 0 s
[2025-06-05 02:22:32] 2025-06-05 06:22:17,601 | INFO     | . initial setup = 2 s
[2025-06-05 02:22:32] 2025-06-05 06:22:17,601 | INFO     | . payload setup = 17 s
[2025-06-05 02:22:32] 2025-06-05 06:22:17,601 | INFO     | . stage-in = 0 s
[2025-06-05 02:22:32] 2025-06-05 06:22:17,601 | INFO     | . payload execution = 7395 s
[2025-06-05 02:22:32] 2025-06-05 06:22:17,601 | INFO     | . stage-out = 1 s
[2025-06-05 02:22:32] 2025-06-05 06:22:17,601 | INFO     | . log creation = 0 s
[2025-06-05 02:22:32] 2025-06-05 06:22:17,601 | INFO     | ..............................
[2025-06-05 02:22:32] 2025-06-05 06:22:17,674 | INFO     | 
[2025-06-05 02:22:32] 2025-06-05 06:22:17,674 | INFO     | job summary report
[2025-06-05 02:22:32] 2025-06-05 06:22:17,674 | INFO     | --------------------------------------------------
[2025-06-05 02:22:32] 2025-06-05 06:22:17,674 | INFO     | PanDA job id: 6667667527
[2025-06-05 02:22:32] 2025-06-05 06:22:17,674 | INFO     | task id: 44871837
[2025-06-05 02:22:32] 2025-06-05 06:22:17,674 | INFO     | errors: (none)
[2025-06-05 02:22:32] 2025-06-05 06:22:17,674 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | pilot state: finished 
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | transexitcode: 0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | exeerrorcode: 0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | exeerrordiag: 
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | exitcode: 0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | exitmsg: OK
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | cpuconsumptiontime: 44116 s
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | nevents: 400
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | neventsw: 0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | pid: 70865
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | pgrp: 70865
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | corecount: 8
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | event service: False
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | sizes: {0: 2397392, 9: 2397598, 11: 2397626, 7415: 2424902, 7417: 2433843, 7418: 2433899, 7424: 2434197}
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | --------------------------------------------------
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | 
[2025-06-05 02:22:32] 2025-06-05 06:22:17,675 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 02:22:32] 2025-06-05 06:22:17,697 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,697 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,697 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,697 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,697 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,697 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | job 6667667527 has completed (purged errors)
[2025-06-05 02:22:32] 2025-06-05 06:22:17,698 | INFO     | overall cleanup function is called
[2025-06-05 02:22:32] 2025-06-05 06:22:18,705 | INFO     | --- collectZombieJob: --- 10, [70865]
[2025-06-05 02:22:32] 2025-06-05 06:22:18,706 | INFO     | zombie collector waiting for pid 70865
[2025-06-05 02:22:32] 2025-06-05 06:22:18,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:22:32] 2025-06-05 06:22:18,706 | INFO     | collected zombie processes
[2025-06-05 02:22:32] 2025-06-05 06:22:18,706 | INFO     | will attempt to kill all subprocesses of pid=70865
[2025-06-05 02:22:32] 2025-06-05 06:22:18,924 | INFO     | process IDs to be killed: [70865] (in reverse order)
[2025-06-05 02:22:32] 2025-06-05 06:22:19,009 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:22:32] 2025-06-05 06:22:19,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:22:32] 2025-06-05 06:22:19,018 | INFO     | did not find any defunct processes belonging to 70865
[2025-06-05 02:22:32] 2025-06-05 06:22:19,025 | INFO     | did not find any defunct processes belonging to 70865
[2025-06-05 02:22:32] 2025-06-05 06:22:19,025 | INFO     | ready for new job
[2025-06-05 02:22:32] 2025-06-05 06:22:19,025 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:22:32] 2025-06-05 06:22:19,026 | INFO     | **************************************
[2025-06-05 02:22:32] 2025-06-05 06:22:19,026 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:22:32] 2025-06-05 06:22:19,026 | INFO     | **************************************
[2025-06-05 02:22:32] 2025-06-05 06:22:19,027 | INFO     | 
[2025-06-05 02:22:32] 2025-06-05 06:22:19,030 | INFO     | architecture information:
[2025-06-05 02:22:32] 2025-06-05 06:22:19,033 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:22:32] 2025-06-05 06:22:19,050 | INFO     | cat /etc/os-release:
[2025-06-05 02:22:32] NAME="CentOS Linux"
[2025-06-05 02:22:32] VERSION="7 (Core)"
[2025-06-05 02:22:32] ID="centos"
[2025-06-05 02:22:32] ID_LIKE="rhel fedora"
[2025-06-05 02:22:32] VERSION_ID="7"
[2025-06-05 02:22:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:22:32] ANSI_COLOR="0;31"
[2025-06-05 02:22:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:22:32] HOME_URL="https://www.centos.org/"
[2025-06-05 02:22:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:22:32] 
[2025-06-05 02:22:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:22:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:22:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:22:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:22:32] 
[2025-06-05 02:22:32] 2025-06-05 06:22:19,051 | INFO     | **************************************
[2025-06-05 02:22:32] 2025-06-05 06:22:19,554 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 02:22:32] 2025-06-05 06:22:19,582 | INFO     | sufficient remaining disk space (106668490752 B)
[2025-06-05 02:22:32] 2025-06-05 06:22:19,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:22:32] 2025-06-05 06:22:19,582 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:22:32] 2025-06-05 06:22:19,582 | INFO     | update_server=False
[2025-06-05 02:22:32] 2025-06-05 06:22:19,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:22:32] 2025-06-05 06:22:19,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:22:32] 2025-06-05 06:22:19,583 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:22:32] 2025-06-05 06:22:19,583 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:22:32] 2025-06-05 06:22:19,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:22:32] 2025-06-05 06:22:19,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:22:32] 2025-06-05 06:22:19,808 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 02:22:32] 2025-06-05 06:22:19,809 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 02:22:32] 2025-06-05 06:22:19,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:22:32] 2025-06-05 06:22:19,809 | INFO     | will abort loop
[2025-06-05 02:22:32] 2025-06-05 06:22:19,913 | INFO     | all data control threads have been joined
[2025-06-05 02:22:32] 2025-06-05 06:22:20,419 | INFO     | all job control threads have been joined
[2025-06-05 02:22:32] 2025-06-05 06:22:20,589 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:20,592 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:20,669 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:20,800 | INFO     | all payload control threads have been joined
[2025-06-05 02:22:32] 2025-06-05 06:22:20,814 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:20,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:22:32] 2025-06-05 06:22:20,865 | INFO     | [job] validate thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:20,918 | INFO     | [data] control thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:20,935 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:20,984 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:21,339 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:21,392 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:21,425 | INFO     | [job] control thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:21,447 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:21,457 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:21,806 | INFO     | [payload] control thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:22,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:22:32] 2025-06-05 06:22:22,837 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:26,573 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:22:32] 2025-06-05 06:22:26,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845073000256)>', '<ExcThread(monitor, started 139844193871616)>']
[2025-06-05 02:22:32] 2025-06-05 06:22:27,628 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:22:32] 2025-06-05 06:22:27,629 | INFO     | [monitor] control thread has ended
[2025-06-05 02:22:32] 2025-06-05 06:22:31,817 | INFO     | all workflow threads have been joined
[2025-06-05 02:22:32] 2025-06-05 06:22:31,818 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:22:32] 2025-06-05 06:22:31,818 | INFO     | traces error code: 0
[2025-06-05 02:22:32] 2025-06-05 06:22:31,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:22:32] 2025-06-05 06:22:31,929 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:22:32] 2025-06-05 06:22:31,931 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:22:32] 2025-06-05 06:22:31,934 [wrapper] pilotpid: 61669
[2025-06-05 02:22:32] 2025-06-05 06:22:31,936 [wrapper] Pilot exit status: 0
[2025-06-05 02:22:32] 2025-06-05 06:22:31,984 [wrapper] pandaids: 6667667527
[2025-06-05 02:22:32] 2025-06-05 06:22:32,045 [wrapper] cleanup supervisor_pilot 58259 61670
[2025-06-05 02:22:32] 2025-06-05 06:22:32,048 [wrapper] Test setup, not cleaning
[2025-06-05 02:22:32] 2025-06-05 06:22:32,050 [wrapper] apfmon messages muted
[2025-06-05 02:22:32] 2025-06-05 06:22:32,053 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:22:32] 2025-06-05 06:22:32,055 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:22:32]  *** Error codes and diagnostics ***
[2025-06-05 02:22:32]     "exeErrorCode": 0,
[2025-06-05 02:22:32]     "exeErrorDiag": "",
[2025-06-05 02:22:32]     "pilotErrorCode": 0,
[2025-06-05 02:22:32]     "pilotErrorDiag": "",
[2025-06-05 02:22:32]  *** Listing of results directory ***
[2025-06-05 02:22:32] total 414568
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas    495897 May 27 17:39 pilot3.tar.gz
[2025-06-05 02:22:32] -rwx------ 1 boincer umatlas     37140 May 27 18:36 runpilot2-wrapper.sh
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas      5111 May 27 18:36 queuedata.json
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas       100 Jun  5 00:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:22:32] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 00:17 run_atlas
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas       105 Jun  5 00:17 job.xml
[2025-06-05 02:22:32] -rw-r--r-- 2 boincer umatlas 222852386 Jun  5 00:17 EVNT.44871834._002918.pool.root.1
[2025-06-05 02:22:32] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 00:17 start_atlas.sh
[2025-06-05 02:22:32] drwxrwx--x 2 boincer umatlas      4096 Jun  5 00:17 shared
[2025-06-05 02:22:32] -rw-r--r-- 2 boincer umatlas    508879 Jun  5 00:17 input.tar.gz
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas         0 Jun  5 00:17 boinc_lockfile
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 00:17 pandaJob.out
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas    987109 Jun  5 00:18 agis_schedconf.cvmfs.json
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas   1598969 Jun  5 00:18 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:22:32] drwx------ 4 boincer umatlas      4096 Jun  5 00:18 pilot3
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas      6302 Jun  5 02:20 init_data.xml
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas 195754728 Jun  5 02:21 HITS.44871837._074439.pool.root.1
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas       529 Jun  5 02:21 boinc_task_state.xml
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas        95 Jun  5 02:21 pilot_heartbeat.json
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas      1081 Jun  5 02:22 memory_monitor_summary.json
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas    343895 Jun  5 02:22 log.44871837._074439.job.log.tgz.1
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas      7754 Jun  5 02:22 heartbeat.json
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas        27 Jun  5 02:22 wrapper_checkpoint.txt
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 02:22 boinc_mmap_file
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas      4663 Jun  5 02:22 pilotlog.txt
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas    699767 Jun  5 02:22 log.44871837._074439.job.log.1
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas       357 Jun  5 02:22 output.list
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas       620 Jun  5 02:22 runtime_log
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas   1064960 Jun  5 02:22 result.tar.gz
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas      8654 Jun  5 02:22 runtime_log.err
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas       659 Jun  5 02:22 GOTNDmc5He7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiWSKDmNku7Un.diag
[2025-06-05 02:22:32] -rw-r--r-- 1 boincer umatlas     20798 Jun  5 02:22 stderr.txt
[2025-06-05 02:22:32] HITS file was successfully produced:
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas 195754728 Jun  5 02:21 shared/HITS.pool.root.1
[2025-06-05 02:22:32]  *** Contents of shared directory: ***
[2025-06-05 02:22:32] total 410356
[2025-06-05 02:22:32] -rw-r--r-- 2 boincer umatlas 222852386 Jun  5 00:17 ATLAS.root_0
[2025-06-05 02:22:32] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 00:17 start_atlas.sh
[2025-06-05 02:22:32] -rw-r--r-- 2 boincer umatlas    508879 Jun  5 00:17 input.tar.gz
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas 195754728 Jun  5 02:21 HITS.pool.root.1
[2025-06-05 02:22:32] -rw------- 1 boincer umatlas   1064960 Jun  5 02:22 result.tar.gz
02:22:34 (55925): run_atlas exited; CPU time 43728.682298
02:22:34 (55925): called boinc_finish(0)

</stderr_txt>
]]>

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