Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:32 (3220): wrapper (7.7.26015): starting
00:09:32 (3220): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 00:09:32] Arguments: --nthreads 8
[2025-06-05 00:09:32] Threads: 8
[2025-06-05 00:09:32] Checking for CVMFS
[2025-06-05 00:09:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:09:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:09:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:09:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:09:32] 2.11.2.0 96941 13617 292596 146805 0 191 12707475 18432000 15057 130560 0 73581316 99.585 56623991 45529 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 00:09:32] CVMFS is ok
[2025-06-05 00:09:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:09:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:09:32] Further information can be found at the LHC@home message board.
[2025-06-05 00:09:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:09:32] Checking for apptainer binary...
[2025-06-05 00:09:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:09:32] Running /usr/bin/apptainer --version
[2025-06-05 00:09:33] apptainer version 1.3.2-1.el7
[2025-06-05 00:09:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:09:34] c-212-6.aglt2.org
[2025-06-05 00:09:34] apptainer works
[2025-06-05 00:09:34] Set ATHENA_PROC_NUMBER=8
[2025-06-05 00:09:34] Set ATHENA_CORE_NUMBER=8
[2025-06-05 00:09:34] Starting ATLAS job with PandaID=6666763866
[2025-06-05 00:09:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:13:13 (73184): wrapper (7.7.26015): starting
04:13:13 (73184): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:13:13] Arguments: --nthreads 8
[2025-06-05 04:13:13] Threads: 8
[2025-06-05 04:13:13] This job has been restarted, cleaning up previous attempt
[2025-06-05 04:13:13] Checking for CVMFS
[2025-06-05 04:13:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:13:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:13:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:13:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:13:15] 2.11.2.0 96941 13861 295288 146811 1 73 13523791 18432001 19569 130560 0 74577281 99.588 56827668 45540 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-05 04:13:15] CVMFS is ok
[2025-06-05 04:13:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 04:13:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 04:13:15] Further information can be found at the LHC@home message board.
[2025-06-05 04:13:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:13:15] Checking for apptainer binary...
[2025-06-05 04:13:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:13:15] Running /usr/bin/apptainer --version
[2025-06-05 04:13:15] apptainer version 1.3.2-1.el7
[2025-06-05 04:13:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:13:18] c-212-6.aglt2.org
[2025-06-05 04:13:18] apptainer works
[2025-06-05 04:13:18] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:13:18] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:13:18] Starting ATLAS job with PandaID=6666763866
[2025-06-05 04:13:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:32:46]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:32:46] 2025-06-05 12:32:24,956 | INFO     | monitor loop #1054: job 0:6666763866 is in state 'finished'
[2025-06-05 08:32:46] 2025-06-05 12:32:24,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:32:46] 2025-06-05 12:32:27,460 | INFO     | monitor loop #1055: job 0:6666763866 is in state 'finished'
[2025-06-05 08:32:46] 2025-06-05 12:32:27,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:32:46] 2025-06-05 12:32:29,964 | INFO     | monitor loop #1056: job 0:6666763866 is in state 'finished'
[2025-06-05 08:32:46] 2025-06-05 12:32:29,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:32:46] 2025-06-05 12:32:32,468 | INFO     | monitor loop #1057: job 0:6666763866 is in state 'finished'
[2025-06-05 08:32:46] 2025-06-05 12:32:32,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 08:32:46] 2025-06-05 12:32:32,885 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 08:32:46] 2025-06-05 12:32:32,886 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666763866/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:32:46] 2025-06-05 12:32:32,886 | INFO     | extracted standard info from prmon json
[2025-06-05 08:32:46] 2025-06-05 12:32:32,886 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:32:46] 2025-06-05 12:32:32,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:32:46] 2025-06-05 12:32:32,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:32:46] 2025-06-05 12:32:32,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:32:46] 2025-06-05 12:32:32,891 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:32:46] 2025-06-05 12:32:32,891 | INFO     | sum of square deviations: 5021499398.988114
[2025-06-05 08:32:46] 2025-06-05 12:32:32,893 | INFO     | sum of deviations: 51557201660.102776
[2025-06-05 08:32:46] 2025-06-05 12:32:32,893 | INFO     | mean x: 1749119002.063241
[2025-06-05 08:32:46] 2025-06-05 12:32:32,893 | INFO     | mean y: 2451125.118577075
[2025-06-05 08:32:46] 2025-06-05 12:32:32,893 | INFO     | -- intersect: -17956264778.55442
[2025-06-05 08:32:46] 2025-06-05 12:32:32,893 | INFO     | intersect: -17956264778.55442
[2025-06-05 08:32:46] 2025-06-05 12:32:32,893 | INFO     | chi2: 3.1040059463789227
[2025-06-05 08:32:46] 2025-06-05 12:32:32,894 | INFO     | sum of square deviations: 4729629038.967744
[2025-06-05 08:32:46] 2025-06-05 12:32:32,895 | INFO     | sum of deviations: 66972371420.93551
[2025-06-05 08:32:46] 2025-06-05 12:32:32,895 | INFO     | mean x: 1749118849.564516
[2025-06-05 08:32:46] 2025-06-05 12:32:32,895 | INFO     | mean y: 2459039.879032258
[2025-06-05 08:32:46] 2025-06-05 12:32:32,895 | INFO     | -- intersect: -24765368687.675884
[2025-06-05 08:32:46] 2025-06-05 12:32:32,895 | INFO     | intersect: -24765368687.675884
[2025-06-05 08:32:46] 2025-06-05 12:32:32,895 | INFO     | chi2: 2.340267885953382
[2025-06-05 08:32:46] 2025-06-05 12:32:32,896 | INFO     | current chi2=2.340267885953382 (change=24.604916150901825 %)
[2025-06-05 08:32:46] 2025-06-05 12:32:32,896 | INFO     | right removable region: 247
[2025-06-05 08:32:46] 2025-06-05 12:32:32,896 | INFO     | sum of square deviations: 4729619278.967744
[2025-06-05 08:32:46] 2025-06-05 12:32:32,897 | INFO     | sum of deviations: -4259485287.4516087
[2025-06-05 08:32:46] 2025-06-05 12:32:32,897 | INFO     | mean x: 1749119154.564516
[2025-06-05 08:32:46] 2025-06-05 12:32:32,897 | INFO     | mean y: 2480130.1532258065
[2025-06-05 08:32:46] 2025-06-05 12:32:32,898 | INFO     | -- intersect: 1577733203.4816604
[2025-06-05 08:32:46] 2025-06-05 12:32:32,898 | INFO     | intersect: 1577733203.4816604
[2025-06-05 08:32:46] 2025-06-05 12:32:32,898 | INFO     | chi2: 0.8879113488518686
[2025-06-05 08:32:46] 2025-06-05 12:32:32,898 | INFO     | current chi2=0.8879113488518686 (change=71.39466340624476 %)
[2025-06-05 08:32:46] 2025-06-05 12:32:32,898 | INFO     | sum of square deviations: 4449274258.946507
[2025-06-05 08:32:46] 2025-06-05 12:32:32,900 | INFO     | sum of deviations: -16996341542.374489
[2025-06-05 08:32:46] 2025-06-05 12:32:32,900 | INFO     | mean x: 1749119307.0658436
[2025-06-05 08:32:46] 2025-06-05 12:32:32,900 | INFO     | mean y: 2487054.46090535
[2025-06-05 08:32:46] 2025-06-05 12:32:32,900 | INFO     | -- intersect: 6684167573.811847
[2025-06-05 08:32:46] 2025-06-05 12:32:32,900 | INFO     | intersect: 6684167573.811847
[2025-06-05 08:32:46] 2025-06-05 12:32:32,900 | INFO     | chi2: 0.7928168750019302
[2025-06-05 08:32:46] 2025-06-05 12:32:32,900 | INFO     | current chi2=0.7928168750019302 (change=10.709906340638872 %)
[2025-06-05 08:32:46] 2025-06-05 12:32:32,900 | INFO     | left removable region: 20
[2025-06-05 08:32:46] 2025-06-05 12:32:32,900 | INFO     | sum of square deviations: 3626988890.8722625
[2025-06-05 08:32:46] 2025-06-05 12:32:32,902 | INFO     | sum of deviations: -2821956303.8325996
[2025-06-05 08:32:46] 2025-06-05 12:32:32,902 | INFO     | mean x: 1749119429.0704846
[2025-06-05 08:32:46] 2025-06-05 12:32:32,902 | INFO     | mean y: 2497218.114537445
[2025-06-05 08:32:46] 2025-06-05 12:32:32,902 | INFO     | -- intersect: 1363388786.1707268
[2025-06-05 08:32:46] 2025-06-05 12:32:32,902 | INFO     | intersect: 1363388786.1707268
[2025-06-05 08:32:46] 2025-06-05 12:32:32,902 | INFO     | chi2: 0.00331871838829378
[2025-06-05 08:32:46] 2025-06-05 12:32:32,902 | INFO     | -- intersect: 1363388786.1707268
[2025-06-05 08:32:46] 2025-06-05 12:32:32,902 | INFO     | current memory leak: -0.78 B/s (using 227 data points, chi2=0.00)
[2025-06-05 08:32:46] 2025-06-05 12:32:32,903 | INFO     | ..............................
[2025-06-05 08:32:46] 2025-06-05 12:32:32,903 | INFO     | . Timing measurements:
[2025-06-05 08:32:46] 2025-06-05 12:32:32,903 | INFO     | . get job = 0 s
[2025-06-05 08:32:46] 2025-06-05 12:32:32,903 | INFO     | . initial setup = 2 s
[2025-06-05 08:32:46] 2025-06-05 12:32:32,903 | INFO     | . payload setup = 23 s
[2025-06-05 08:32:46] 2025-06-05 12:32:32,903 | INFO     | . stage-in = 0 s
[2025-06-05 08:32:46] 2025-06-05 12:32:32,903 | INFO     | . payload execution = 15410 s
[2025-06-05 08:32:46] 2025-06-05 12:32:32,903 | INFO     | . stage-out = 2 s
[2025-06-05 08:32:46] 2025-06-05 12:32:32,903 | INFO     | . log creation = 0 s
[2025-06-05 08:32:46] 2025-06-05 12:32:32,903 | INFO     | ..............................
[2025-06-05 08:32:46] 2025-06-05 12:32:32,977 | INFO     | 
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | job summary report
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | --------------------------------------------------
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | PanDA job id: 6666763866
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | task id: 44871837
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | errors: (none)
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | pilot state: finished 
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | transexitcode: 0
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | exeerrorcode: 0
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | exeerrordiag: 
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | exitcode: 0
[2025-06-05 08:32:46] 2025-06-05 12:32:32,978 | INFO     | exitmsg: OK
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | cpuconsumptiontime: 45949 s
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | nevents: 400
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | neventsw: 0
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | pid: 43136
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | pgrp: 43136
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | corecount: 8
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | event service: False
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | sizes: {0: 2397392, 11: 2397392, 15: 2397626, 22: 2397654, 15438: 2429086, 15441: 2438211, 15485: 2438325}
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | --------------------------------------------------
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | 
[2025-06-05 08:32:46] 2025-06-05 12:32:32,979 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 08:32:46] 2025-06-05 12:32:33,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | job 6666763866 has completed (purged errors)
[2025-06-05 08:32:46] 2025-06-05 12:32:33,149 | INFO     | overall cleanup function is called
[2025-06-05 08:32:46] 2025-06-05 12:32:34,166 | INFO     | --- collectZombieJob: --- 10, [43136]
[2025-06-05 08:32:46] 2025-06-05 12:32:34,166 | INFO     | zombie collector waiting for pid 43136
[2025-06-05 08:32:46] 2025-06-05 12:32:34,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:32:46] 2025-06-05 12:32:34,166 | INFO     | collected zombie processes
[2025-06-05 08:32:46] 2025-06-05 12:32:34,166 | INFO     | will attempt to kill all subprocesses of pid=43136
[2025-06-05 08:32:46] 2025-06-05 12:32:34,404 | INFO     | process IDs to be killed: [43136] (in reverse order)
[2025-06-05 08:32:46] 2025-06-05 12:32:34,954 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:32:46] 2025-06-05 12:32:34,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:32:46] 2025-06-05 12:32:34,964 | INFO     | did not find any defunct processes belonging to 43136
[2025-06-05 08:32:46] 2025-06-05 12:32:34,972 | INFO     | did not find any defunct processes belonging to 43136
[2025-06-05 08:32:46] 2025-06-05 12:32:34,973 | INFO     | ready for new job
[2025-06-05 08:32:46] 2025-06-05 12:32:34,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:32:46] 2025-06-05 12:32:34,975 | INFO     | **************************************
[2025-06-05 08:32:46] 2025-06-05 12:32:34,975 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:32:46] 2025-06-05 12:32:34,975 | INFO     | **************************************
[2025-06-05 08:32:46] 2025-06-05 12:32:34,975 | INFO     | 
[2025-06-05 08:32:46] 2025-06-05 12:32:34,979 | INFO     | architecture information:
[2025-06-05 08:32:46] 2025-06-05 12:32:34,987 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:32:46] 2025-06-05 12:32:35,006 | INFO     | cat /etc/os-release:
[2025-06-05 08:32:46] NAME="CentOS Linux"
[2025-06-05 08:32:46] VERSION="7 (Core)"
[2025-06-05 08:32:46] ID="centos"
[2025-06-05 08:32:46] ID_LIKE="rhel fedora"
[2025-06-05 08:32:46] VERSION_ID="7"
[2025-06-05 08:32:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:32:46] ANSI_COLOR="0;31"
[2025-06-05 08:32:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:32:46] HOME_URL="https://www.centos.org/"
[2025-06-05 08:32:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:32:46] 
[2025-06-05 08:32:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:32:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:32:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:32:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:32:46] 
[2025-06-05 08:32:46] 2025-06-05 12:32:35,007 | INFO     | **************************************
[2025-06-05 08:32:46] 2025-06-05 12:32:35,510 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 08:32:46] 2025-06-05 12:32:35,527 | INFO     | sufficient remaining disk space (103843627008 B)
[2025-06-05 08:32:46] 2025-06-05 12:32:35,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:32:46] 2025-06-05 12:32:35,527 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:32:46] 2025-06-05 12:32:35,527 | INFO     | update_server=False
[2025-06-05 08:32:46] 2025-06-05 12:32:35,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:32:46] 2025-06-05 12:32:35,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:32:46] 2025-06-05 12:32:35,632 | INFO     | all data control threads have been joined
[2025-06-05 08:32:46] 2025-06-05 12:32:35,807 | INFO     | all job control threads have been joined
[2025-06-05 08:32:46] 2025-06-05 12:32:35,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:32:46] 2025-06-05 12:32:35,976 | INFO     | aborting loop
[2025-06-05 08:32:46] 2025-06-05 12:32:36,182 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:32:46] 2025-06-05 12:32:36,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:32:46] 2025-06-05 12:32:36,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:32:46] 2025-06-05 12:32:36,533 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:36,638 | INFO     | [data] control thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:36,788 | INFO     | all payload control threads have been joined
[2025-06-05 08:32:46] 2025-06-05 12:32:36,813 | INFO     | [job] control thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:36,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:32:46] 2025-06-05 12:32:36,982 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:37,143 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:37,254 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:37,410 | INFO     | [job] validate thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:37,485 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:37,505 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:37,696 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:37,769 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:37,794 | INFO     | [payload] control thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:37,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:32:46] 2025-06-05 12:32:37,996 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:38,891 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:38,998 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:39,534 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:32:46] 2025-06-05 12:32:39,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698311558976)>', '<ExcThread(monitor, started 140697843767040)>']
[2025-06-05 08:32:46] 2025-06-05 12:32:40,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:32:46] 2025-06-05 12:32:40,206 | INFO     | [monitor] control thread has ended
[2025-06-05 08:32:46] 2025-06-05 12:32:44,891 | INFO     | all workflow threads have been joined
[2025-06-05 08:32:46] 2025-06-05 12:32:44,891 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:32:46] 2025-06-05 12:32:44,891 | INFO     | traces error code: 0
[2025-06-05 08:32:46] 2025-06-05 12:32:44,892 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:32:46] 2025-06-05 12:32:44,986 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:32:46] 2025-06-05 12:32:44,990 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:32:46] 2025-06-05 12:32:44,993 [wrapper] pilotpid: 94934
[2025-06-05 08:32:46] 2025-06-05 12:32:44,996 [wrapper] Pilot exit status: 0
[2025-06-05 08:32:46] 2025-06-05 12:32:45,005 [wrapper] pandaids: 6666763866 6666763866
[2025-06-05 08:32:46] 2025-06-05 12:32:45,062 [wrapper] cleanup supervisor_pilot 66238 94935
[2025-06-05 08:32:46] 2025-06-05 12:32:45,069 [wrapper] Test setup, not cleaning
[2025-06-05 08:32:46] 2025-06-05 12:32:45,098 [wrapper] apfmon messages muted
[2025-06-05 08:32:46] 2025-06-05 12:32:45,101 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:32:46] 2025-06-05 12:32:45,112 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:32:46]  *** Error codes and diagnostics ***
[2025-06-05 08:32:46]     "exeErrorCode": 0,
[2025-06-05 08:32:46]     "exeErrorDiag": "",
[2025-06-05 08:32:46]     "pilotErrorCode": 0,
[2025-06-05 08:32:46]     "pilotErrorDiag": "",
[2025-06-05 08:32:46]  *** Listing of results directory ***
[2025-06-05 08:32:46] total 638256
[2025-06-05 08:32:46] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas    495897 May 27 00:09 pilot3.tar.gz
[2025-06-05 08:32:46] -rwx------ 1 boincer umatlas     37140 May 27 01:09 runpilot2-wrapper.sh
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas      5111 May 27 01:09 queuedata.json
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas       100 Jun  5 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:32:46] -rwxr-xr-x 1 boincer umatlas      7986 Jun  5 00:09 run_atlas
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas       105 Jun  5 00:09 job.xml
[2025-06-05 08:32:46] -rw-r--r-- 3 boincer umatlas 225541767 Jun  5 00:09 EVNT.44871834._002470.pool.root.1
[2025-06-05 08:32:46] -rw-r--r-- 3 boincer umatlas 225541767 Jun  5 00:09 ATLAS.root_0
[2025-06-05 08:32:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 00:09 start_atlas.sh
[2025-06-05 08:32:46] drwxrwx--x 2 boincer umatlas      4096 Jun  5 00:09 shared
[2025-06-05 08:32:46] -rw-r--r-- 2 boincer umatlas    508876 Jun  5 00:09 input.tar.gz
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas         0 Jun  5 00:09 boinc_lockfile
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas      2559 Jun  5 04:13 pandaJob.out
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas    983087 Jun  5 04:13 agis_schedconf.cvmfs.json
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas      6302 Jun  5 08:28 init_data.xml
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas 195112309 Jun  5 08:30 HITS.44871837._062603.pool.root.1
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas       530 Jun  5 08:30 boinc_task_state.xml
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas      1084 Jun  5 08:31 memory_monitor_summary.json
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas   1598969 Jun  5 08:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas    408985 Jun  5 08:31 log.44871837._062603.job.log.tgz.1
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas        96 Jun  5 08:32 pilot_heartbeat.json
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas      7755 Jun  5 08:32 heartbeat.json
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas        28 Jun  5 08:32 wrapper_checkpoint.txt
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas      4354 Jun  5 08:32 pilotlog.txt
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas   1363334 Jun  5 08:32 log.44871837._062603.job.log.1
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas       357 Jun  5 08:32 output.list
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas       620 Jun  5 08:32 runtime_log
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas   1792000 Jun  5 08:32 result.tar.gz
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas       788 Jun  5 08:32 YMkLDm0j1d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWdYKDmhpl9hm.diag
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas      8740 Jun  5 08:32 runtime_log.err
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas      8192 Jun  5 08:32 boinc_mmap_file
[2025-06-05 08:32:46] -rw-r--r-- 1 boincer umatlas     23288 Jun  5 08:32 stderr.txt
[2025-06-05 08:32:46] HITS file was successfully produced:
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas 195112309 Jun  5 08:30 shared/HITS.pool.root.1
[2025-06-05 08:32:46]  *** Contents of shared directory: ***
[2025-06-05 08:32:46] total 413072
[2025-06-05 08:32:46] -rw-r--r-- 3 boincer umatlas 225541767 Jun  5 00:09 ATLAS.root_0
[2025-06-05 08:32:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  5 00:09 start_atlas.sh
[2025-06-05 08:32:46] -rw-r--r-- 2 boincer umatlas    508876 Jun  5 00:09 input.tar.gz
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas 195112309 Jun  5 08:30 HITS.pool.root.1
[2025-06-05 08:32:46] -rw------- 1 boincer umatlas   1792000 Jun  5 08:32 result.tar.gz
08:32:47 (73184): run_atlas exited; CPU time 45434.709667
08:32:47 (73184): called boinc_finish(0)

</stderr_txt>
]]>

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