Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:56:55 (817722): wrapper (7.7.26015): starting
23:56:55 (817722): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 23:56:55] Arguments: --nthreads 12
[2025-06-04 23:56:55] Threads: 12
[2025-06-04 23:56:55] Checking for CVMFS
[2025-06-04 23:56:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:56:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:56:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:56:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:56:55] 2.12.6.0 5825 2267 177176 146804 0 522 36581123 40960000 8822 16776704 0 12917209 99.928 2177868 50907 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 23:56:55] CVMFS is ok
[2025-06-04 23:56:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:56:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:56:56] Further information can be found at the LHC@home message board.
[2025-06-04 23:56:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:56:56] Checking for apptainer binary...
[2025-06-04 23:56:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:56:56] Running /usr/bin/apptainer --version
[2025-06-04 23:56:56] apptainer version 1.4.1-1.el9
[2025-06-04 23:56:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:56:56] c6-8-12-4.aglt2.org
[2025-06-04 23:56:56] apptainer works
[2025-06-04 23:56:56] Set ATHENA_PROC_NUMBER=12
[2025-06-04 23:56:56] Set ATHENA_CORE_NUMBER=12
[2025-06-04 23:56:56] Starting ATLAS job with PandaID=6668533378
[2025-06-04 23:56:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:31:02]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:31:02] 2025-06-05 07:30:49,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:31:02] 2025-06-05 07:30:49,477 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:31:02] 2025-06-05 07:30:49,477 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:31:02] 2025-06-05 07:30:49,481 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:31:02] 2025-06-05 07:30:49,482 | INFO     | sum of square deviations: 2871781506.8809633
[2025-06-05 03:31:02] 2025-06-05 07:30:49,483 | INFO     | sum of deviations: 20991018096.761906
[2025-06-05 03:31:02] 2025-06-05 07:30:49,483 | INFO     | mean x: 1749102224.9761906
[2025-06-05 03:31:02] 2025-06-05 07:30:49,483 | INFO     | mean y: 2368140.3523809523
[2025-06-05 03:31:02] 2025-06-05 07:30:49,483 | INFO     | -- intersect: -12782530839.458342
[2025-06-05 03:31:02] 2025-06-05 07:30:49,483 | INFO     | intersect: -12782530839.458342
[2025-06-05 03:31:02] 2025-06-05 07:30:49,484 | INFO     | chi2: 1.467397079682353
[2025-06-05 03:31:02] 2025-06-05 07:30:49,484 | INFO     | sum of square deviations: 2671525917.1902547
[2025-06-05 03:31:02] 2025-06-05 07:30:49,485 | INFO     | sum of deviations: 23926067422.136574
[2025-06-05 03:31:02] 2025-06-05 07:30:49,486 | INFO     | mean x: 1749102072.4829268
[2025-06-05 03:31:02] 2025-06-05 07:30:49,486 | INFO     | mean y: 2370351.0390243903
[2025-06-05 03:31:02] 2025-06-05 07:30:49,486 | INFO     | -- intersect: -15662510099.920496
[2025-06-05 03:31:02] 2025-06-05 07:30:49,486 | INFO     | intersect: -15662510099.920496
[2025-06-05 03:31:02] 2025-06-05 07:30:49,487 | INFO     | chi2: 1.4467128670411737
[2025-06-05 03:31:02] 2025-06-05 07:30:49,487 | INFO     | current chi2=1.4467128670411737 (change=1.4095852395765134 %)
[2025-06-05 03:31:02] 2025-06-05 07:30:49,487 | INFO     | right removable region: 204
[2025-06-05 03:31:02] 2025-06-05 07:30:49,487 | INFO     | sum of square deviations: 2671477483.219522
[2025-06-05 03:31:02] 2025-06-05 07:30:49,488 | INFO     | sum of deviations: -4645201161.073171
[2025-06-05 03:31:02] 2025-06-05 07:30:49,488 | INFO     | mean x: 1749102377.487805
[2025-06-05 03:31:02] 2025-06-05 07:30:49,489 | INFO     | mean y: 2387375.770731707
[2025-06-05 03:31:02] 2025-06-05 07:30:49,489 | INFO     | -- intersect: 3043750234.255491
[2025-06-05 03:31:02] 2025-06-05 07:30:49,489 | INFO     | intersect: 3043750234.255491
[2025-06-05 03:31:02] 2025-06-05 07:30:49,489 | INFO     | chi2: 0.13500119748346653
[2025-06-05 03:31:02] 2025-06-05 07:30:49,489 | INFO     | current chi2=0.13500119748346653 (change=90.79995460310646 %)
[2025-06-05 03:31:02] 2025-06-05 07:30:49,490 | INFO     | sum of square deviations: 2480708522.0
[2025-06-05 03:31:02] 2025-06-05 07:30:49,491 | INFO     | sum of deviations: 1568628044.0
[2025-06-05 03:31:02] 2025-06-05 07:30:49,491 | INFO     | mean x: 1749102530.0
[2025-06-05 03:31:02] 2025-06-05 07:30:49,491 | INFO     | mean y: 2382461.28
[2025-06-05 03:31:02] 2025-06-05 07:30:49,491 | INFO     | -- intersect: -1103628686.7678685
[2025-06-05 03:31:02] 2025-06-05 07:30:49,491 | INFO     | intersect: -1103628686.7678685
[2025-06-05 03:31:02] 2025-06-05 07:30:49,492 | INFO     | chi2: 0.06594033291404189
[2025-06-05 03:31:02] 2025-06-05 07:30:49,492 | INFO     | current chi2=0.06594033291404189 (change=51.155742213236636 %)
[2025-06-05 03:31:02] 2025-06-05 07:30:49,492 | INFO     | sum of square deviations: 2299242060.717937
[2025-06-05 03:31:02] 2025-06-05 07:30:49,493 | INFO     | sum of deviations: 1584183012.0000002
[2025-06-05 03:31:02] 2025-06-05 07:30:49,494 | INFO     | mean x: 1749102682.5128205
[2025-06-05 03:31:02] 2025-06-05 07:30:49,494 | INFO     | mean y: 2382449.4
[2025-06-05 03:31:02] 2025-06-05 07:30:49,494 | INFO     | -- intersect: -1202753279.1170871
[2025-06-05 03:31:02] 2025-06-05 07:30:49,494 | INFO     | intersect: -1202753279.1170871
[2025-06-05 03:31:02] 2025-06-05 07:30:49,494 | INFO     | chi2: 0.06579853411786314
[2025-06-05 03:31:02] 2025-06-05 07:30:49,494 | INFO     | current chi2=0.06579853411786314 (change=0.21504106805707474 %)
[2025-06-05 03:31:02] 2025-06-05 07:30:49,495 | INFO     | left removable region: 30
[2025-06-05 03:31:02] 2025-06-05 07:30:49,495 | INFO     | sum of square deviations: 1633491928.534483
[2025-06-05 03:31:02] 2025-06-05 07:30:49,496 | INFO     | sum of deviations: 3317298051.9137917
[2025-06-05 03:31:02] 2025-06-05 07:30:49,496 | INFO     | mean x: 1749102957.0517242
[2025-06-05 03:31:02] 2025-06-05 07:30:49,496 | INFO     | mean y: 2387952.120689655
[2025-06-05 03:31:02] 2025-06-05 07:30:49,496 | INFO     | -- intersect: -3549693163.5968347
[2025-06-05 03:31:02] 2025-06-05 07:30:49,496 | INFO     | intersect: -3549693163.5968347
[2025-06-05 03:31:02] 2025-06-05 07:30:49,497 | INFO     | chi2: 0.03627506873271898
[2025-06-05 03:31:02] 2025-06-05 07:30:49,497 | INFO     | -- intersect: -3549693163.5968347
[2025-06-05 03:31:02] 2025-06-05 07:30:49,497 | INFO     | current memory leak: 2.03 B/s (using 174 data points, chi2=0.04)
[2025-06-05 03:31:02] 2025-06-05 07:30:49,498 | INFO     | ..............................
[2025-06-05 03:31:02] 2025-06-05 07:30:49,498 | INFO     | . Timing measurements:
[2025-06-05 03:31:02] 2025-06-05 07:30:49,498 | INFO     | . get job = 0 s
[2025-06-05 03:31:02] 2025-06-05 07:30:49,498 | INFO     | . initial setup = 3 s
[2025-06-05 03:31:02] 2025-06-05 07:30:49,498 | INFO     | . payload setup = 5 s
[2025-06-05 03:31:02] 2025-06-05 07:30:49,498 | INFO     | . stage-in = 0 s
[2025-06-05 03:31:02] 2025-06-05 07:30:49,498 | INFO     | . payload execution = 12788 s
[2025-06-05 03:31:02] 2025-06-05 07:30:49,499 | INFO     | . stage-out = 3 s
[2025-06-05 03:31:02] 2025-06-05 07:30:49,499 | INFO     | . log creation = 0 s
[2025-06-05 03:31:02] 2025-06-05 07:30:49,499 | INFO     | ..............................
[2025-06-05 03:31:02] 2025-06-05 07:30:49,591 | INFO     | 
[2025-06-05 03:31:02] 2025-06-05 07:30:49,591 | INFO     | job summary report
[2025-06-05 03:31:02] 2025-06-05 07:30:49,591 | INFO     | --------------------------------------------------
[2025-06-05 03:31:02] 2025-06-05 07:30:49,591 | INFO     | PanDA job id: 6668533378
[2025-06-05 03:31:02] 2025-06-05 07:30:49,591 | INFO     | task id: 44871837
[2025-06-05 03:31:02] 2025-06-05 07:30:49,591 | INFO     | errors: (none)
[2025-06-05 03:31:02] 2025-06-05 07:30:49,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | pilot state: finished 
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | transexitcode: 0
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | exeerrorcode: 0
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | exeerrordiag: 
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | exitcode: 0
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | exitmsg: OK
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | cpuconsumptiontime: 52145 s
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | nevents: 400
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | neventsw: 0
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | pid: 830200
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | pgrp: 830200
[2025-06-05 03:31:02] 2025-06-05 07:30:49,592 | INFO     | corecount: 12
[2025-06-05 03:31:02] 2025-06-05 07:30:49,593 | INFO     | event service: False
[2025-06-05 03:31:02] 2025-06-05 07:30:49,593 | INFO     | sizes: {0: 2397390, 4: 2397596, 11: 2397624, 12798: 2427494, 12802: 2436435, 12805: 2436519, 12810: 2436817}
[2025-06-05 03:31:02] 2025-06-05 07:30:49,593 | INFO     | --------------------------------------------------
[2025-06-05 03:31:02] 2025-06-05 07:30:49,593 | INFO     | 
[2025-06-05 03:31:02] 2025-06-05 07:30:49,593 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 03:31:02] 2025-06-05 07:30:49,612 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,612 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,614 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:31:02] 2025-06-05 07:30:49,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,614 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:31:02] 2025-06-05 07:30:49,614 | INFO     | job 6668533378 has completed (purged errors)
[2025-06-05 03:31:02] 2025-06-05 07:30:49,614 | INFO     | overall cleanup function is called
[2025-06-05 03:31:02] 2025-06-05 07:30:49,840 | INFO     | PID=821319 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 03:31:02] 2025-06-05 07:30:49,840 | INFO     | .. there are 8 such processes running
[2025-06-05 03:31:02] 2025-06-05 07:30:50,623 | INFO     | --- collectZombieJob: --- 10, [830200]
[2025-06-05 03:31:02] 2025-06-05 07:30:50,623 | INFO     | zombie collector waiting for pid 830200
[2025-06-05 03:31:02] 2025-06-05 07:30:50,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:31:02] 2025-06-05 07:30:50,623 | INFO     | collected zombie processes
[2025-06-05 03:31:02] 2025-06-05 07:30:50,623 | INFO     | will attempt to kill all subprocesses of pid=830200
[2025-06-05 03:31:02] 2025-06-05 07:30:50,853 | INFO     | process IDs to be killed: [830200] (in reverse order)
[2025-06-05 03:31:02] 2025-06-05 07:30:50,925 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:31:02] 2025-06-05 07:30:50,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:31:02] 2025-06-05 07:30:50,935 | INFO     | did not find any defunct processes belonging to 830200
[2025-06-05 03:31:02] 2025-06-05 07:30:50,944 | INFO     | did not find any defunct processes belonging to 830200
[2025-06-05 03:31:02] 2025-06-05 07:30:50,944 | INFO     | ready for new job
[2025-06-05 03:31:02] 2025-06-05 07:30:50,944 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:31:02] 2025-06-05 07:30:50,946 | INFO     | **************************************
[2025-06-05 03:31:02] 2025-06-05 07:30:50,946 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:31:02] 2025-06-05 07:30:50,946 | INFO     | **************************************
[2025-06-05 03:31:02] 2025-06-05 07:30:50,947 | INFO     | 
[2025-06-05 03:31:02] 2025-06-05 07:30:50,963 | INFO     | architecture information:
[2025-06-05 03:31:02] 2025-06-05 07:30:50,964 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:31:02] 2025-06-05 07:30:50,981 | INFO     | cat /etc/os-release:
[2025-06-05 03:31:02] NAME="CentOS Linux"
[2025-06-05 03:31:02] VERSION="7 (Core)"
[2025-06-05 03:31:02] ID="centos"
[2025-06-05 03:31:02] ID_LIKE="rhel fedora"
[2025-06-05 03:31:02] VERSION_ID="7"
[2025-06-05 03:31:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:31:02] ANSI_COLOR="0;31"
[2025-06-05 03:31:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:31:02] HOME_URL="https://www.centos.org/"
[2025-06-05 03:31:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:31:02] 
[2025-06-05 03:31:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:31:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:31:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:31:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:31:02] 
[2025-06-05 03:31:02] 2025-06-05 07:30:50,981 | INFO     | **************************************
[2025-06-05 03:31:02] 2025-06-05 07:30:51,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 03:31:02] 2025-06-05 07:30:51,505 | INFO     | sufficient remaining disk space (56485740544 B)
[2025-06-05 03:31:02] 2025-06-05 07:30:51,506 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:31:02] 2025-06-05 07:30:51,506 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:31:02] 2025-06-05 07:30:51,506 | INFO     | update_server=False
[2025-06-05 03:31:02] 2025-06-05 07:30:51,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:31:02] 2025-06-05 07:30:51,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:31:02] 2025-06-05 07:30:51,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:31:02] 2025-06-05 07:30:51,743 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 03:31:02] 2025-06-05 07:30:51,743 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 03:31:02] 2025-06-05 07:30:51,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:31:02] 2025-06-05 07:30:51,743 | INFO     | will abort loop
[2025-06-05 03:31:02] 2025-06-05 07:30:51,845 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:31:02] 2025-06-05 07:30:51,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:31:02] 2025-06-05 07:30:51,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:31:02] 2025-06-05 07:30:51,993 | INFO     | all payload control threads have been joined
[2025-06-05 03:31:02] 2025-06-05 07:30:52,185 | INFO     | all data control threads have been joined
[2025-06-05 03:31:02] 2025-06-05 07:30:52,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:31:02] 2025-06-05 07:30:52,511 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:52,512 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:52,530 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:52,748 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:52,756 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:52,756 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:52,764 | INFO     | [job] validate thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:52,993 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:52,999 | INFO     | [payload] control thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:53,096 | INFO     | all job control threads have been joined
[2025-06-05 03:31:02] 2025-06-05 07:30:53,186 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:53,190 | INFO     | [data] control thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:53,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:53,709 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:54,101 | INFO     | [job] control thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:54,411 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:55,513 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:31:02] 2025-06-05 07:30:57,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907980572480)>', '<ExcThread(monitor, started 139907209094912)>']
[2025-06-05 03:31:02] 2025-06-05 07:30:57,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:31:02] 2025-06-05 07:30:57,875 | INFO     | [monitor] control thread has ended
[2025-06-05 03:31:02] 2025-06-05 07:31:02,576 | INFO     | all workflow threads have been joined
[2025-06-05 03:31:02] 2025-06-05 07:31:02,576 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:31:02] 2025-06-05 07:31:02,577 | INFO     | traces error code: 0
[2025-06-05 03:31:02] 2025-06-05 07:31:02,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:31:02] 2025-06-05 07:31:02,769 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:31:02] 2025-06-05 07:31:02,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:31:02] 2025-06-05 07:31:02,775 [wrapper] pilotpid: 821319
[2025-06-05 03:31:02] 2025-06-05 07:31:02,777 [wrapper] Pilot exit status: 0
[2025-06-05 03:31:02] 2025-06-05 07:31:02,790 [wrapper] pandaids: 6668533378
[2025-06-05 03:31:02] 2025-06-05 07:31:02,845 [wrapper] cleanup supervisor_pilot 1258972 821320
[2025-06-05 03:31:02] 2025-06-05 07:31:02,848 [wrapper] Test setup, not cleaning
[2025-06-05 03:31:02] 2025-06-05 07:31:02,851 [wrapper] apfmon messages muted
[2025-06-05 03:31:02] 2025-06-05 07:31:02,854 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:31:02] 2025-06-05 07:31:02,857 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:31:02]  *** Error codes and diagnostics ***
[2025-06-05 03:31:02]     "exeErrorCode": 0,
[2025-06-05 03:31:02]     "exeErrorDiag": "",
[2025-06-05 03:31:02]     "pilotErrorCode": 0,
[2025-06-05 03:31:02]     "pilotErrorDiag": "",
[2025-06-05 03:31:02]  *** Listing of results directory ***
[2025-06-05 03:31:02] total 423996
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas    495897 May 28 11:15 pilot3.tar.gz
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas      5111 May 28 11:18 queuedata.json
[2025-06-05 03:31:02] -rwx------. 1 boincer umatlas     37140 May 28 11:18 runpilot2-wrapper.sh
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas       100 Jun  4 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:31:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 23:56 run_atlas
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas       105 Jun  4 23:56 job.xml
[2025-06-05 03:31:02] -rw-r--r--. 2 boincer umatlas 224194765 Jun  4 23:56 EVNT.44871834._003359.pool.root.1
[2025-06-05 03:31:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 23:56 start_atlas.sh
[2025-06-05 03:31:02] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 23:56 shared
[2025-06-05 03:31:02] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 23:56 input.tar.gz
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas         0 Jun  4 23:56 boinc_lockfile
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 23:56 pandaJob.out
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas    987109 Jun  4 23:57 agis_schedconf.cvmfs.json
[2025-06-05 03:31:02] drwx------. 4 boincer umatlas      4096 Jun  4 23:57 pilot3
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas 203107536 Jun  5 03:30 HITS.44871837._086116.pool.root.1
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas       530 Jun  5 03:30 boinc_task_state.xml
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas      6843 Jun  5 03:30 init_data.xml
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas      1038 Jun  5 03:30 memory_monitor_summary.json
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas   1598969 Jun  5 03:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas    427747 Jun  5 03:30 log.44871837._086116.job.log.tgz.1
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas        95 Jun  5 03:30 pilot_heartbeat.json
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas      7719 Jun  5 03:30 heartbeat.json
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 03:30 boinc_mmap_file
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas        28 Jun  5 03:31 wrapper_checkpoint.txt
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas      4539 Jun  5 03:31 pilotlog.txt
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas   1092720 Jun  5 03:31 log.44871837._086116.job.log.1
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas       357 Jun  5 03:31 output.list
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas       620 Jun  5 03:31 runtime_log
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas   1536000 Jun  5 03:31 result.tar.gz
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas      8667 Jun  5 03:31 runtime_log.err
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas       657 Jun  5 03:31 mGmNDmGjXe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZPcKDm0C0Rtn.diag
[2025-06-05 03:31:02] -rw-r--r--. 1 boincer umatlas     20951 Jun  5 03:31 stderr.txt
[2025-06-05 03:31:02] HITS file was successfully produced:
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas 203107536 Jun  5 03:30 shared/HITS.pool.root.1
[2025-06-05 03:31:02]  *** Contents of shared directory: ***
[2025-06-05 03:31:02] total 419316
[2025-06-05 03:31:02] -rw-r--r--. 2 boincer umatlas 224194765 Jun  4 23:56 ATLAS.root_0
[2025-06-05 03:31:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 23:56 start_atlas.sh
[2025-06-05 03:31:02] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 23:56 input.tar.gz
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas 203107536 Jun  5 03:30 HITS.pool.root.1
[2025-06-05 03:31:02] -rw-------. 1 boincer umatlas   1536000 Jun  5 03:31 result.tar.gz
03:31:04 (817722): run_atlas exited; CPU time 52405.173278
03:31:04 (817722): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN