Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:45:26 (975659): wrapper (7.7.26015): starting
23:45:26 (975659): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 23:45:26] Arguments: --nthreads 12
[2025-06-04 23:45:26] Threads: 12
[2025-06-04 23:45:26] Checking for CVMFS
[2025-06-04 23:45:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:45:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:45:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:45:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:45:27] 2.12.6.0 40552 1715 166108 146804 3 381 27220233 32935937 14119 16776704 0 3316167 99.164 8968575 44116 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 23:45:27] CVMFS is ok
[2025-06-04 23:45:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:45:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:45:27] Further information can be found at the LHC@home message board.
[2025-06-04 23:45:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:45:27] Checking for apptainer binary...
[2025-06-04 23:45:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 23:45:27] Running /usr/bin/apptainer --version
[2025-06-04 23:45:27] apptainer version 1.4.1-1.el9
[2025-06-04 23:45:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:45:27] c6-1-26-4.aglt2.org
[2025-06-04 23:45:27] apptainer works
[2025-06-04 23:45:27] Set ATHENA_PROC_NUMBER=12
[2025-06-04 23:45:27] Set ATHENA_CORE_NUMBER=12
[2025-06-04 23:45:27] Starting ATLAS job with PandaID=6680359226
[2025-06-04 23:45:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:08:06]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:08:06] 2025-06-05 06:07:52,721 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6680359226/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:08:06] 2025-06-05 06:07:52,722 | INFO     | extracted standard info from prmon json
[2025-06-05 02:08:06] 2025-06-05 06:07:52,722 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:08:06] 2025-06-05 06:07:52,722 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:08:06] 2025-06-05 06:07:52,723 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:08:06] 2025-06-05 06:07:52,723 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:08:06] 2025-06-05 06:07:52,726 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:08:06] 2025-06-05 06:07:52,726 | INFO     | sum of square deviations: 832760200.2302191
[2025-06-05 02:08:06] 2025-06-05 06:07:52,727 | INFO     | sum of deviations: -1566318446.8345184
[2025-06-05 02:08:06] 2025-06-05 06:07:52,727 | INFO     | mean x: 1749099408.438849
[2025-06-05 02:08:06] 2025-06-05 06:07:52,727 | INFO     | mean y: 2328862.784172662
[2025-06-05 02:08:06] 2025-06-05 06:07:52,727 | INFO     | -- intersect: 3292167483.827456
[2025-06-05 02:08:06] 2025-06-05 06:07:52,727 | INFO     | intersect: 3292167483.827456
[2025-06-05 02:08:06] 2025-06-05 06:07:52,728 | INFO     | chi2: 2.6632519216824724
[2025-06-05 02:08:06] 2025-06-05 06:07:52,728 | INFO     | sum of square deviations: 746099176.6343291
[2025-06-05 02:08:06] 2025-06-05 06:07:52,729 | INFO     | sum of deviations: 8115431198.567158
[2025-06-05 02:08:06] 2025-06-05 06:07:52,729 | INFO     | mean x: 1749099255.9477613
[2025-06-05 02:08:06] 2025-06-05 06:07:52,729 | INFO     | mean y: 2345432.223880597
[2025-06-05 02:08:06] 2025-06-05 06:07:52,729 | INFO     | -- intersect: -19022866115.578205
[2025-06-05 02:08:06] 2025-06-05 06:07:52,729 | INFO     | intersect: -19022866115.578205
[2025-06-05 02:08:06] 2025-06-05 06:07:52,729 | INFO     | chi2: 1.7914938241556375
[2025-06-05 02:08:06] 2025-06-05 06:07:52,729 | INFO     | current chi2=1.7914938241556375 (change=32.73284402536407 %)
[2025-06-05 02:08:06] 2025-06-05 06:07:52,730 | INFO     | sum of square deviations: 665670706.0155059
[2025-06-05 02:08:06] 2025-06-05 06:07:52,730 | INFO     | sum of deviations: 7891574085.193795
[2025-06-05 02:08:06] 2025-06-05 06:07:52,730 | INFO     | mean x: 1749099103.4573643
[2025-06-05 02:08:06] 2025-06-05 06:07:52,730 | INFO     | mean y: 2345011.2170542637
[2025-06-05 02:08:06] 2025-06-05 06:07:52,730 | INFO     | -- intersect: -20733350630.102505
[2025-06-05 02:08:06] 2025-06-05 06:07:52,731 | INFO     | intersect: -20733350630.102505
[2025-06-05 02:08:06] 2025-06-05 06:07:52,731 | INFO     | chi2: 1.7935755522435903
[2025-06-05 02:08:06] 2025-06-05 06:07:52,731 | INFO     | current chi2=1.7935755522435903 (change=-0.11620068458421684 %)
[2025-06-05 02:08:06] 2025-06-05 06:07:52,731 | INFO     | right removable region: 128
[2025-06-05 02:08:06] 2025-06-05 06:07:52,731 | INFO     | sum of square deviations: 746070201.731344
[2025-06-05 02:08:06] 2025-06-05 06:07:52,732 | INFO     | sum of deviations: -23214837322.89553
[2025-06-05 02:08:06] 2025-06-05 06:07:52,732 | INFO     | mean x: 1749099560.9552238
[2025-06-05 02:08:06] 2025-06-05 06:07:52,732 | INFO     | mean y: 2366443.850746269
[2025-06-05 02:08:06] 2025-06-05 06:07:52,732 | INFO     | -- intersect: 54427622505.40457
[2025-06-05 02:08:06] 2025-06-05 06:07:52,732 | INFO     | intersect: 54427622505.40457
[2025-06-05 02:08:06] 2025-06-05 06:07:52,733 | INFO     | chi2: 1.1165837133288148
[2025-06-05 02:08:06] 2025-06-05 06:07:52,733 | INFO     | current chi2=1.1165837133288148 (change=58.0744238185538 %)
[2025-06-05 02:08:06] 2025-06-05 06:07:52,733 | INFO     | sum of square deviations: 665620808.0930247
[2025-06-05 02:08:06] 2025-06-05 06:07:52,734 | INFO     | sum of deviations: -17438571172.325584
[2025-06-05 02:08:06] 2025-06-05 06:07:52,734 | INFO     | mean x: 1749099713.4651163
[2025-06-05 02:08:06] 2025-06-05 06:07:52,734 | INFO     | mean y: 2355449.03875969
[2025-06-05 02:08:06] 2025-06-05 06:07:52,734 | INFO     | -- intersect: 45826944268.82352
[2025-06-05 02:08:06] 2025-06-05 06:07:52,734 | INFO     | intersect: 45826944268.82352
[2025-06-05 02:08:06] 2025-06-05 06:07:52,734 | INFO     | chi2: 1.0815822976349299
[2025-06-05 02:08:06] 2025-06-05 06:07:52,734 | INFO     | current chi2=1.0815822976349299 (change=3.1346880019892978 %)
[2025-06-05 02:08:06] 2025-06-05 06:07:52,734 | INFO     | left removable region: 20
[2025-06-05 02:08:06] 2025-06-05 06:07:52,735 | INFO     | sum of square deviations: 390603034.99074095
[2025-06-05 02:08:06] 2025-06-05 06:07:52,735 | INFO     | sum of deviations: 1336274039.3425925
[2025-06-05 02:08:06] 2025-06-05 06:07:52,735 | INFO     | mean x: 1749099682.9907408
[2025-06-05 02:08:06] 2025-06-05 06:07:52,735 | INFO     | mean y: 2354153.342592593
[2025-06-05 02:08:06] 2025-06-05 06:07:52,735 | INFO     | -- intersect: -5981410152.683062
[2025-06-05 02:08:06] 2025-06-05 06:07:52,735 | INFO     | intersect: -5981410152.683062
[2025-06-05 02:08:06] 2025-06-05 06:07:52,736 | INFO     | chi2: 0.02839969278071603
[2025-06-05 02:08:06] 2025-06-05 06:07:52,736 | INFO     | -- intersect: -5981410152.683062
[2025-06-05 02:08:06] 2025-06-05 06:07:52,736 | INFO     | current memory leak: 3.42 B/s (using 108 data points, chi2=0.03)
[2025-06-05 02:08:06] 2025-06-05 06:07:52,742 | INFO     | ..............................
[2025-06-05 02:08:06] 2025-06-05 06:07:52,742 | INFO     | . Timing measurements:
[2025-06-05 02:08:06] 2025-06-05 06:07:52,742 | INFO     | . get job = 0 s
[2025-06-05 02:08:06] 2025-06-05 06:07:52,742 | INFO     | . initial setup = 3 s
[2025-06-05 02:08:06] 2025-06-05 06:07:52,742 | INFO     | . payload setup = 14 s
[2025-06-05 02:08:06] 2025-06-05 06:07:52,742 | INFO     | . stage-in = 0 s
[2025-06-05 02:08:06] 2025-06-05 06:07:52,742 | INFO     | . payload execution = 8456 s
[2025-06-05 02:08:06] 2025-06-05 06:07:52,742 | INFO     | . stage-out = 1 s
[2025-06-05 02:08:06] 2025-06-05 06:07:52,742 | INFO     | . log creation = 0 s
[2025-06-05 02:08:06] 2025-06-05 06:07:52,742 | INFO     | ..............................
[2025-06-05 02:08:06] 2025-06-05 06:07:52,870 | INFO     | 
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | job summary report
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | --------------------------------------------------
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | PanDA job id: 6680359226
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | task id: 45006595
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | errors: (none)
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | pilot state: finished 
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | transexitcode: 0
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | exeerrorcode: 0
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | exeerrordiag: 
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | exitcode: 0
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | exitmsg: OK
[2025-06-05 02:08:06] 2025-06-05 06:07:52,871 | INFO     | cpuconsumptiontime: 35653 s
[2025-06-05 02:08:06] 2025-06-05 06:07:52,872 | INFO     | nevents: 400
[2025-06-05 02:08:06] 2025-06-05 06:07:52,872 | INFO     | neventsw: 0
[2025-06-05 02:08:06] 2025-06-05 06:07:52,872 | INFO     | pid: 988112
[2025-06-05 02:08:06] 2025-06-05 06:07:52,872 | INFO     | pgrp: 988112
[2025-06-05 02:08:06] 2025-06-05 06:07:52,872 | INFO     | corecount: 12
[2025-06-05 02:08:06] 2025-06-05 06:07:52,872 | INFO     | event service: False
[2025-06-05 02:08:06] 2025-06-05 06:07:52,872 | INFO     | sizes: {0: 2396463, 1: 2397319, 2: 2397319, 11: 2397553, 13: 2397581, 8475: 2425400, 8476: 2434341, 8479: 2434397, 8497: 2434567}
[2025-06-05 02:08:06] 2025-06-05 06:07:52,872 | INFO     | --------------------------------------------------
[2025-06-05 02:08:06] 2025-06-05 06:07:52,872 | INFO     | 
[2025-06-05 02:08:06] 2025-06-05 06:07:52,872 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-05 02:08:06] 2025-06-05 06:07:52,892 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,892 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,892 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,892 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,892 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:08:06] 2025-06-05 06:07:52,893 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,894 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:08:06] 2025-06-05 06:07:52,894 | INFO     | job 6680359226 has completed (purged errors)
[2025-06-05 02:08:06] 2025-06-05 06:07:52,894 | INFO     | overall cleanup function is called
[2025-06-05 02:08:06] 2025-06-05 06:07:53,908 | INFO     | --- collectZombieJob: --- 10, [988112]
[2025-06-05 02:08:06] 2025-06-05 06:07:53,908 | INFO     | zombie collector waiting for pid 988112
[2025-06-05 02:08:06] 2025-06-05 06:07:53,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:08:06] 2025-06-05 06:07:53,909 | INFO     | collected zombie processes
[2025-06-05 02:08:06] 2025-06-05 06:07:53,909 | INFO     | will attempt to kill all subprocesses of pid=988112
[2025-06-05 02:08:06] 2025-06-05 06:07:54,206 | INFO     | process IDs to be killed: [988112] (in reverse order)
[2025-06-05 02:08:06] 2025-06-05 06:07:54,291 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:08:06] 2025-06-05 06:07:54,292 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:08:06] 2025-06-05 06:07:54,303 | INFO     | did not find any defunct processes belonging to 988112
[2025-06-05 02:08:06] 2025-06-05 06:07:54,313 | INFO     | did not find any defunct processes belonging to 988112
[2025-06-05 02:08:06] 2025-06-05 06:07:54,313 | INFO     | ready for new job
[2025-06-05 02:08:06] 2025-06-05 06:07:54,314 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:08:06] 2025-06-05 06:07:54,315 | INFO     | **************************************
[2025-06-05 02:08:06] 2025-06-05 06:07:54,315 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:08:06] 2025-06-05 06:07:54,316 | INFO     | **************************************
[2025-06-05 02:08:06] 2025-06-05 06:07:54,316 | INFO     | 
[2025-06-05 02:08:06] 2025-06-05 06:07:54,331 | INFO     | architecture information:
[2025-06-05 02:08:06] 2025-06-05 06:07:54,332 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:08:06] 2025-06-05 06:07:54,348 | INFO     | cat /etc/os-release:
[2025-06-05 02:08:06] NAME="CentOS Linux"
[2025-06-05 02:08:06] VERSION="7 (Core)"
[2025-06-05 02:08:06] ID="centos"
[2025-06-05 02:08:06] ID_LIKE="rhel fedora"
[2025-06-05 02:08:06] VERSION_ID="7"
[2025-06-05 02:08:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:08:06] ANSI_COLOR="0;31"
[2025-06-05 02:08:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:08:06] HOME_URL="https://www.centos.org/"
[2025-06-05 02:08:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:08:06] 
[2025-06-05 02:08:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:08:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:08:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:08:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:08:06] 
[2025-06-05 02:08:06] 2025-06-05 06:07:54,349 | INFO     | **************************************
[2025-06-05 02:08:06] 2025-06-05 06:07:54,852 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-05 02:08:06] 2025-06-05 06:07:54,996 | INFO     | sufficient remaining disk space (75674681344 B)
[2025-06-05 02:08:06] 2025-06-05 06:07:54,997 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:08:06] 2025-06-05 06:07:54,997 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:08:06] 2025-06-05 06:07:54,999 | INFO     | update_server=False
[2025-06-05 02:08:06] 2025-06-05 06:07:54,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:08:06] 2025-06-05 06:07:55,000 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:08:06] 2025-06-05 06:07:55,001 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:08:06] 2025-06-05 06:07:55,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:08:06] 2025-06-05 06:07:55,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:08:06] 2025-06-05 06:07:55,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:08:06] 2025-06-05 06:07:55,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:08:06] 2025-06-05 06:07:55,009 | INFO     | aborting loop
[2025-06-05 02:08:06] 2025-06-05 06:07:55,012 | INFO     | all payload control threads have been joined
[2025-06-05 02:08:06] 2025-06-05 06:07:55,120 | INFO     | all data control threads have been joined
[2025-06-05 02:08:06] 2025-06-05 06:07:55,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:08:06] 2025-06-05 06:07:56,009 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:56,011 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:56,014 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:56,018 | INFO     | [payload] control thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:56,126 | INFO     | [data] control thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:56,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:56,246 | INFO     | [job] validate thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:56,283 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:56,495 | INFO     | all job control threads have been joined
[2025-06-05 02:08:06] 2025-06-05 06:07:56,864 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:56,899 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:56,999 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:57,392 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:57,453 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:57,501 | INFO     | [job] control thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:57,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:08:06] 2025-06-05 06:07:58,894 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:07:59,016 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:08:06] 2025-06-05 06:08:00,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745096578880)>', '<ExcThread(monitor, started 139744470099712)>']
[2025-06-05 02:08:06] 2025-06-05 06:08:01,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:08:06] 2025-06-05 06:08:01,039 | INFO     | [monitor] control thread has ended
[2025-06-05 02:08:06] 2025-06-05 06:08:05,117 | INFO     | all workflow threads have been joined
[2025-06-05 02:08:06] 2025-06-05 06:08:05,117 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:08:06] 2025-06-05 06:08:05,118 | INFO     | traces error code: 0
[2025-06-05 02:08:06] 2025-06-05 06:08:05,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:08:06] 2025-06-05 06:08:05,623 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:08:06] 2025-06-05 06:08:05,649 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:08:06] 2025-06-05 06:08:05,673 [wrapper] pilotpid: 979297
[2025-06-05 02:08:06] 2025-06-05 06:08:05,700 [wrapper] Pilot exit status: 0
[2025-06-05 02:08:06] 2025-06-05 06:08:05,915 [wrapper] pandaids: 6680359226
[2025-06-05 02:08:06] 2025-06-05 06:08:06,015 [wrapper] cleanup supervisor_pilot 1325056 979298
[2025-06-05 02:08:06] 2025-06-05 06:08:06,031 [wrapper] Test setup, not cleaning
[2025-06-05 02:08:06] 2025-06-05 06:08:06,078 [wrapper] apfmon messages muted
[2025-06-05 02:08:06] 2025-06-05 06:08:06,089 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:08:06] 2025-06-05 06:08:06,104 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:08:06]  *** Error codes and diagnostics ***
[2025-06-05 02:08:06]     "exeErrorCode": 0,
[2025-06-05 02:08:06]     "exeErrorDiag": "",
[2025-06-05 02:08:06]     "pilotErrorCode": 0,
[2025-06-05 02:08:06]     "pilotErrorDiag": "",
[2025-06-05 02:08:06]  *** Listing of results directory ***
[2025-06-05 02:08:06] total 397284
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 23:16 pilot3.tar.gz
[2025-06-05 02:08:06] -rwx------. 1 boincer umatlas     37140 Jun  4 23:44 runpilot2-wrapper.sh
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 23:45 queuedata.json
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas       100 Jun  4 23:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:08:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 23:45 run_atlas
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas       105 Jun  4 23:45 job.xml
[2025-06-05 02:08:06] -rw-r--r--. 2 boincer umatlas 216855846 Jun  4 23:45 EVNT.45006593._002170.pool.root.1
[2025-06-05 02:08:06] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 23:45 input.tar.gz
[2025-06-05 02:08:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 23:45 start_atlas.sh
[2025-06-05 02:08:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 23:45 shared
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas         0 Jun  4 23:45 boinc_lockfile
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 23:45 pandaJob.out
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas    987109 Jun  4 23:45 agis_schedconf.cvmfs.json
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas   1598969 Jun  4 23:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:08:06] drwx------. 4 boincer umatlas      4096 Jun  4 23:45 pilot3
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas      6841 Jun  5 02:03 init_data.xml
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas 183874662 Jun  5 02:06 HITS.45006595._057037.pool.root.1
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas       529 Jun  5 02:07 boinc_task_state.xml
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas        95 Jun  5 02:07 pilot_heartbeat.json
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas      1035 Jun  5 02:07 memory_monitor_summary.json
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas    389611 Jun  5 02:07 log.45006595._057037.job.log.tgz.1
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas      7712 Jun  5 02:07 heartbeat.json
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 02:07 boinc_mmap_file
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas        27 Jun  5 02:08 wrapper_checkpoint.txt
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas      4476 Jun  5 02:08 pilotlog.txt
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas    735460 Jun  5 02:08 log.45006595._057037.job.log.1
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas       357 Jun  5 02:08 output.list
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas       620 Jun  5 02:08 runtime_log
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas   1146880 Jun  5 02:08 result.tar.gz
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas       654 Jun  5 02:08 VmsLDmRiGh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmg4nKDm2mz7Hn.diag
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas      8666 Jun  5 02:08 runtime_log.err
[2025-06-05 02:08:06] -rw-r--r--. 1 boincer umatlas     20948 Jun  5 02:08 stderr.txt
[2025-06-05 02:08:06] HITS file was successfully produced:
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas 183874662 Jun  5 02:06 shared/HITS.pool.root.1
[2025-06-05 02:08:06]  *** Contents of shared directory: ***
[2025-06-05 02:08:06] total 392988
[2025-06-05 02:08:06] -rw-r--r--. 2 boincer umatlas 216855846 Jun  4 23:45 ATLAS.root_0
[2025-06-05 02:08:06] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 23:45 input.tar.gz
[2025-06-05 02:08:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 23:45 start_atlas.sh
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas 183874662 Jun  5 02:06 HITS.pool.root.1
[2025-06-05 02:08:06] -rw-------. 1 boincer umatlas   1146880 Jun  5 02:08 result.tar.gz
02:08:08 (975659): run_atlas exited; CPU time 35807.412303
02:08:08 (975659): called boinc_finish(0)

</stderr_txt>
]]>

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