Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:41:28 (1108559): wrapper (7.7.26015): starting
07:41:28 (1108559): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 07:41:28] Arguments: --nthreads 3
[2025-06-05 07:41:28] Threads: 3
[2025-06-05 07:41:28] Checking for CVMFS
[2025-06-05 07:41:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 07:41:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 07:41:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 07:41:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 07:41:28] 2.9.2.0 1080055 118 49864 146807 1 56 33597010 36864001 0 130560 0 72539 99.976 73950 28107 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 07:41:28] CVMFS is ok
[2025-06-05 07:41:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:41:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 07:41:28] Further information can be found at the LHC@home message board.
[2025-06-05 07:41:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:41:28] Checking for apptainer binary...
[2025-06-05 07:41:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 07:41:28] Running /usr/bin/apptainer --version
[2025-06-05 07:41:28] apptainer version 1.3.6-6.1
[2025-06-05 07:41:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:41:28] thA359
[2025-06-05 07:41:28] apptainer works
[2025-06-05 07:41:28] Set ATHENA_PROC_NUMBER=3
[2025-06-05 07:41:28] Set ATHENA_CORE_NUMBER=3
[2025-06-05 07:41:28] Starting ATLAS job with PandaID=6668862988
[2025-06-05 07:41:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 09:45:41]  *** The last 200 lines of the pilot log: ***
[2025-06-05 09:45:41] 2025-06-05 07:44:39,949 | INFO     | job 6668862988 has finished - writing final server update
[2025-06-05 09:45:41] 2025-06-05 07:44:39,950 | INFO     | total number of processed events: 400 (read)
[2025-06-05 09:45:41] 2025-06-05 07:44:39,953 | INFO     | executing command: lscpu
[2025-06-05 09:45:41] 2025-06-05 07:44:39,971 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 09:45:41] 2025-06-05 07:44:41,583 | WARNING  | process 1118702 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 09:45:41] 2025-06-05 07:44:41,583 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6668862988/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:45:41] 2025-06-05 07:44:41,658 | INFO     | number of running child processes to parent process 1118702: 1
[2025-06-05 09:45:41] 2025-06-05 07:44:41,658 | INFO     | maximum number of monitored processes: 6
[2025-06-05 09:45:41] 2025-06-05 07:44:42,904 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 09:45:41] 2025-06-05 07:44:42,904 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6668862988/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 09:45:41] 2025-06-05 07:44:42,904 | INFO     | extracted standard info from prmon json
[2025-06-05 09:45:41] 2025-06-05 07:44:42,904 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 09:45:41] 2025-06-05 07:44:42,904 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 09:45:41] 2025-06-05 07:44:42,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 09:45:41] 2025-06-05 07:44:42,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 09:45:41] 2025-06-05 07:44:42,905 | INFO     | fitting pss+swap vs Time
[2025-06-05 09:45:41] 2025-06-05 07:44:42,905 | INFO     | sum of square deviations: 549294020.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | sum of deviations: -12432215044.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | mean x: 1749105785.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | mean y: 2407271.272727273
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | -- intersect: 39590056985.39929
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | intersect: 39590056985.39929
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | chi2: 1.8062165441391542
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | sum of deviations: -11430412227.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | mean x: 1749105632.5
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | mean y: 2409611.120689655
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | -- intersect: 41312658933.243095
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | intersect: 41312658933.243095
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | chi2: 1.8025164234785716
[2025-06-05 09:45:41] 2025-06-05 07:44:42,906 | INFO     | current chi2=1.8025164234785716 (change=0.20485476520458717 %)
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | right removable region: 115
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | sum of deviations: -28577519974.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | mean x: 1749105937.5
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | mean y: 2444092.8103448274
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | -- intersect: 103283468219.1782
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | intersect: 103283468219.1782
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | chi2: 0.26355894878216096
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | current chi2=0.26355894878216096 (change=85.4082308327115 %)
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | sum of deviations: -23744426778.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | mean x: 1749106090.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | mean y: 2431775.225225225
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | -- intersect: 97943701712.0378
[2025-06-05 09:45:41] 2025-06-05 07:44:42,907 | INFO     | intersect: 97943701712.0378
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | chi2: 0.2585155367046599
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | current chi2=0.2585155367046599 (change=1.9135802828192379 %)
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | left removable region: 20
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | sum of square deviations: 265828240.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | sum of deviations: -12177904702.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | mean x: 1749106212.0
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | mean y: 2403503.1052631577
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | -- intersect: 80131018745.08334
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | intersect: 80131018745.08334
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | chi2: 0.2080358472946805
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | -- intersect: 80131018745.08334
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | current memory leak: -45.81 B/s (using 95 data points, chi2=0.21)
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | ..............................
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | . Timing measurements:
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | . get job = 0 s
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | . initial setup = 1 s
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | . payload setup = 5 s
[2025-06-05 09:45:41] 2025-06-05 07:44:42,908 | INFO     | . stage-in = 0 s
[2025-06-05 09:45:41] 2025-06-05 07:44:42,909 | INFO     | . payload execution = 7351 s
[2025-06-05 09:45:41] 2025-06-05 07:44:42,909 | INFO     | . stage-out = 0 s
[2025-06-05 09:45:41] 2025-06-05 07:44:42,909 | INFO     | . log creation = 0 s
[2025-06-05 09:45:41] 2025-06-05 07:44:42,909 | INFO     | ..............................
[2025-06-05 09:45:41] 2025-06-05 07:44:43,071 | INFO     | 
[2025-06-05 09:45:41] 2025-06-05 07:44:43,072 | INFO     | job summary report
[2025-06-05 09:45:41] 2025-06-05 07:44:43,072 | INFO     | --------------------------------------------------
[2025-06-05 09:45:41] 2025-06-05 07:44:43,072 | INFO     | PanDA job id: 6668862988
[2025-06-05 09:45:41] 2025-06-05 07:44:43,072 | INFO     | task id: 44871837
[2025-06-05 09:45:41] 2025-06-05 07:44:43,072 | INFO     | errors: (none)
[2025-06-05 09:45:41] 2025-06-05 07:44:43,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 09:45:41] 2025-06-05 07:44:43,073 | INFO     | pilot state: finished 
[2025-06-05 09:45:41] 2025-06-05 07:44:43,073 | INFO     | transexitcode: 0
[2025-06-05 09:45:41] 2025-06-05 07:44:43,073 | INFO     | exeerrorcode: 0
[2025-06-05 09:45:41] 2025-06-05 07:44:43,073 | INFO     | exeerrordiag: 
[2025-06-05 09:45:41] 2025-06-05 07:44:43,073 | INFO     | exitcode: 0
[2025-06-05 09:45:41] 2025-06-05 07:44:43,073 | INFO     | exitmsg: OK
[2025-06-05 09:45:41] 2025-06-05 07:44:43,074 | INFO     | cpuconsumptiontime: 21351 s
[2025-06-05 09:45:41] 2025-06-05 07:44:43,074 | INFO     | nevents: 400
[2025-06-05 09:45:41] 2025-06-05 07:44:43,074 | INFO     | neventsw: 0
[2025-06-05 09:45:41] 2025-06-05 07:44:43,074 | INFO     | pid: 1118702
[2025-06-05 09:45:41] 2025-06-05 07:44:43,074 | INFO     | pgrp: 1118702
[2025-06-05 09:45:41] 2025-06-05 07:44:43,074 | INFO     | corecount: 3
[2025-06-05 09:45:41] 2025-06-05 07:44:43,075 | INFO     | event service: False
[2025-06-05 09:45:41] 2025-06-05 07:44:43,075 | INFO     | sizes: {0: 2397394, 5: 2397600, 10: 2397656, 7360: 2434058, 7362: 2434058, 7367: 2434228}
[2025-06-05 09:45:41] 2025-06-05 07:44:43,075 | INFO     | --------------------------------------------------
[2025-06-05 09:45:41] 2025-06-05 07:44:43,075 | INFO     | 
[2025-06-05 09:45:41] 2025-06-05 07:44:43,075 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 09:45:41] 2025-06-05 07:44:43,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,127 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,129 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 09:45:41] 2025-06-05 07:44:43,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,131 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 09:45:41] 2025-06-05 07:44:43,131 | INFO     | job 6668862988 has completed (purged errors)
[2025-06-05 09:45:41] 2025-06-05 07:44:43,132 | INFO     | overall cleanup function is called
[2025-06-05 09:45:41] 2025-06-05 07:44:44,141 | INFO     | --- collectZombieJob: --- 10, [1118702]
[2025-06-05 09:45:41] 2025-06-05 07:44:44,141 | INFO     | zombie collector waiting for pid 1118702
[2025-06-05 09:45:41] 2025-06-05 07:44:44,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 09:45:41] 2025-06-05 07:44:44,142 | INFO     | collected zombie processes
[2025-06-05 09:45:41] 2025-06-05 07:44:44,142 | INFO     | will attempt to kill all subprocesses of pid=1118702
[2025-06-05 09:45:41] 2025-06-05 07:44:44,194 | INFO     | process IDs to be killed: [1118702] (in reverse order)
[2025-06-05 09:45:41] 2025-06-05 07:44:44,224 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 09:45:41] 2025-06-05 07:44:44,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 09:45:41] 2025-06-05 07:44:44,226 | INFO     | did not find any defunct processes belonging to 1118702
[2025-06-05 09:45:41] 2025-06-05 07:44:44,227 | INFO     | did not find any defunct processes belonging to 1118702
[2025-06-05 09:45:41] 2025-06-05 07:44:44,227 | INFO     | ready for new job
[2025-06-05 09:45:41] 2025-06-05 07:44:44,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 09:45:41] 2025-06-05 07:44:44,228 | INFO     | **************************************
[2025-06-05 09:45:41] 2025-06-05 07:44:44,228 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 09:45:41] 2025-06-05 07:44:44,228 | INFO     | **************************************
[2025-06-05 09:45:41] 2025-06-05 07:44:44,228 | INFO     | 
[2025-06-05 09:45:41] 2025-06-05 07:44:44,228 | INFO     | architecture information:
[2025-06-05 09:45:41] 2025-06-05 07:44:44,228 | INFO     | executing command: cat /etc/os-release
[2025-06-05 09:45:41] 2025-06-05 07:44:44,237 | INFO     | cat /etc/os-release:
[2025-06-05 09:45:41] NAME="CentOS Linux"
[2025-06-05 09:45:41] VERSION="7 (Core)"
[2025-06-05 09:45:41] ID="centos"
[2025-06-05 09:45:41] ID_LIKE="rhel fedora"
[2025-06-05 09:45:41] VERSION_ID="7"
[2025-06-05 09:45:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 09:45:41] ANSI_COLOR="0;31"
[2025-06-05 09:45:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 09:45:41] HOME_URL="https://www.centos.org/"
[2025-06-05 09:45:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 09:45:41] 
[2025-06-05 09:45:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 09:45:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 09:45:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 09:45:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 09:45:41] 
[2025-06-05 09:45:41] 2025-06-05 07:44:44,237 | INFO     | **************************************
[2025-06-05 09:45:41] 2025-06-05 07:44:44,741 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 09:45:41] 2025-06-05 07:44:44,754 | INFO     | sufficient remaining disk space (824829804544 B)
[2025-06-05 09:45:41] 2025-06-05 07:44:44,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 09:45:41] 2025-06-05 07:44:44,754 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 09:45:41] 2025-06-05 07:44:44,754 | INFO     | update_server=False
[2025-06-05 09:45:41] 2025-06-05 07:44:44,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 09:45:41] 2025-06-05 07:44:44,754 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 09:45:41] 2025-06-05 07:44:44,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:45:41] 2025-06-05 07:44:44,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 09:45:41] 2025-06-05 07:44:45,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 09:45:41] 2025-06-05 07:44:45,167 | INFO     | aborting loop
[2025-06-05 09:45:41] 2025-06-05 07:44:45,259 | INFO     | all payload control threads have been joined
[2025-06-05 09:45:41] 2025-06-05 07:44:45,352 | INFO     | all job control threads have been joined
[2025-06-05 09:45:41] 2025-06-05 07:44:45,580 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 09:45:41] 2025-06-05 07:44:45,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 09:45:41] 2025-06-05 07:44:45,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 09:45:41] 2025-06-05 07:44:45,756 | INFO     | all data control threads have been joined
[2025-06-05 09:45:41] 2025-06-05 07:44:45,759 | INFO     | [job] queue monitor thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:45,760 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:45,761 | INFO     | [job] retrieve thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:46,003 | INFO     | [payload] failed_post thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:46,173 | INFO     | [job] job monitor thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:46,264 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:46,265 | INFO     | [payload] control thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:46,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:46,358 | INFO     | [job] control thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:46,760 | INFO     | [data] control thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:46,760 | INFO     | [data] copytool_out thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:46,902 | INFO     | [payload] validate_post thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:46,986 | INFO     | [data] copytool_in thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:47,165 | INFO     | [job] validate thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:47,198 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:48,761 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 09:45:41] 2025-06-05 07:44:49,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707900598080)>', '<ExcThread(monitor, started 140707239008000)>']
[2025-06-05 09:45:41] 2025-06-05 07:44:50,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 09:45:41] 2025-06-05 07:44:50,607 | INFO     | [monitor] control thread has ended
[2025-06-05 09:45:41] 2025-06-05 07:44:54,810 | INFO     | all workflow threads have been joined
[2025-06-05 09:45:41] 2025-06-05 07:44:54,811 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 09:45:41] 2025-06-05 07:44:54,811 | INFO     | traces error code: 0
[2025-06-05 09:45:41] 2025-06-05 07:44:54,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 09:45:41] 2025-06-05 07:44:54,861 [wrapper] ==== pilot stdout END ====
[2025-06-05 09:45:41] 2025-06-05 07:44:54,864 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 09:45:41] 2025-06-05 07:44:54,867 [wrapper] pilotpid: 1112202
[2025-06-05 09:45:41] 2025-06-05 07:44:54,870 [wrapper] Pilot exit status: 0
[2025-06-05 09:45:41] 2025-06-05 07:44:54,878 [wrapper] pandaids: 6668862988
[2025-06-05 09:45:41] 2025-06-05 07:44:54,897 [wrapper] cleanup supervisor_pilot 1140116 1112203
[2025-06-05 09:45:41] 2025-06-05 07:44:54,900 [wrapper] Test setup, not cleaning
[2025-06-05 09:45:41] 2025-06-05 07:44:54,903 [wrapper] apfmon messages muted
[2025-06-05 09:45:41] 2025-06-05 07:44:54,906 [wrapper] ==== wrapper stdout END ====
[2025-06-05 09:45:41] 2025-06-05 07:44:54,908 [wrapper] ==== wrapper stderr END ====
[2025-06-05 09:45:41]  *** Error codes and diagnostics ***
[2025-06-05 09:45:41]     "exeErrorCode": 0,
[2025-06-05 09:45:41]     "exeErrorDiag": "",
[2025-06-05 09:45:41]     "pilotErrorCode": 0,
[2025-06-05 09:45:41]     "pilotErrorDiag": "",
[2025-06-05 09:45:41]  *** Listing of results directory ***
[2025-06-05 09:45:41] total 416252
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc    495897 May 28 21:50 pilot3.tar.gz
[2025-06-05 09:45:41] -rwx------ 1 boinc boinc     37140 May 28 21:54 runpilot2-wrapper.sh
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc      5111 May 28 21:54 queuedata.json
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc       100 Jun  5 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 09:45:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 07:41 run_atlas
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc       105 Jun  5 07:41 job.xml
[2025-06-05 09:45:41] -rw-r--r-- 2 boinc boinc 221953562 Jun  5 07:41 EVNT.44871834._003489.pool.root.1
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc      6679 Jun  5 07:41 init_data.xml
[2025-06-05 09:45:41] drwxrwx--x 2 boinc boinc      4096 Jun  5 07:41 shared
[2025-06-05 09:45:41] -rw-r--r-- 2 boinc boinc    508872 Jun  5 07:41 input.tar.gz
[2025-06-05 09:45:41] -rw-r--r-- 2 boinc boinc     15093 Jun  5 07:41 start_atlas.sh
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc         0 Jun  5 07:41 boinc_lockfile
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc      2558 Jun  5 07:41 pandaJob.out
[2025-06-05 09:45:41] -rw------- 1 boinc boinc    987109 Jun  5 07:41 agis_schedconf.cvmfs.json
[2025-06-05 09:45:41] -rw------- 1 boinc boinc   1598969 Jun  5 07:41 agis_ddmendpoints.agis.ALL.json
[2025-06-05 09:45:41] drwx------ 4 boinc boinc      4096 Jun  5 07:41 pilot3
[2025-06-05 09:45:41] -rw------- 1 boinc boinc 198542289 Jun  5 09:44 HITS.44871837._089682.pool.root.1
[2025-06-05 09:45:41] -rw------- 1 boinc boinc        95 Jun  5 09:44 pilot_heartbeat.json
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc       529 Jun  5 09:44 boinc_task_state.xml
[2025-06-05 09:45:41] -rw------- 1 boinc boinc      1037 Jun  5 09:44 memory_monitor_summary.json
[2025-06-05 09:45:41] -rw------- 1 boinc boinc    260527 Jun  5 09:44 log.44871837._089682.job.log.tgz.1
[2025-06-05 09:45:41] -rw------- 1 boinc boinc      7661 Jun  5 09:44 heartbeat.json
[2025-06-05 09:45:41] -rw------- 1 boinc boinc      4357 Jun  5 09:44 pilotlog.txt
[2025-06-05 09:45:41] -rw------- 1 boinc boinc    696346 Jun  5 09:44 log.44871837._089682.job.log.1
[2025-06-05 09:45:41] -rw------- 1 boinc boinc       357 Jun  5 09:44 output.list
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc       620 Jun  5 09:44 runtime_log
[2025-06-05 09:45:41] -rw------- 1 boinc boinc    972800 Jun  5 09:44 result.tar.gz
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc      8733 Jun  5 09:44 runtime_log.err
[2025-06-05 09:45:41] -rw------- 1 boinc boinc       659 Jun  5 09:44 rKUNDm21be7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlycKDmiMggPn.diag
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc      8192 Jun  5 09:45 boinc_mmap_file
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc        27 Jun  5 09:45 wrapper_checkpoint.txt
[2025-06-05 09:45:41] -rw-r--r-- 1 boinc boinc     21051 Jun  5 09:45 stderr.txt
[2025-06-05 09:45:41] HITS file was successfully produced:
[2025-06-05 09:45:41] -rw------- 1 boinc boinc 198542289 Jun  5 09:44 shared/HITS.pool.root.1
[2025-06-05 09:45:41]  *** Contents of shared directory: ***
[2025-06-05 09:45:41] total 412120
[2025-06-05 09:45:41] -rw-r--r-- 2 boinc boinc 221953562 Jun  5 07:41 ATLAS.root_0
[2025-06-05 09:45:41] -rw-r--r-- 2 boinc boinc    508872 Jun  5 07:41 input.tar.gz
[2025-06-05 09:45:41] -rw-r--r-- 2 boinc boinc     15093 Jun  5 07:41 start_atlas.sh
[2025-06-05 09:45:41] -rw------- 1 boinc boinc 198542289 Jun  5 09:44 HITS.pool.root.1
[2025-06-05 09:45:41] -rw------- 1 boinc boinc    972800 Jun  5 09:44 result.tar.gz
09:45:43 (1108559): run_atlas exited; CPU time 21396.771576
09:45:43 (1108559): called boinc_finish(0)

</stderr_txt>
]]>

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