Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:30:19 (26276): wrapper (7.7.26015): starting
09:30:19 (26276): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 09:30:20] Arguments: --nthreads 8
[2025-06-05 09:30:20] Threads: 8
[2025-06-05 09:30:20] Checking for CVMFS
[2025-06-05 09:30:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:30:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:30:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:30:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:30:22] 2.11.2.0 3391 34350 94120 146810 2 16 15912952 25165825 3135 130560 0 18212882 99.821 19822694 2018 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 09:30:22] CVMFS is ok
[2025-06-05 09:30:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:30:22] Checking for apptainer binary...
[2025-06-05 09:30:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 09:30:22] Running /usr/bin/apptainer --version
[2025-06-05 09:30:22] apptainer version 1.3.2-1.el7
[2025-06-05 09:30:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:30:35] cg-vwn306.simple-grid.lan
[2025-06-05 09:30:35] apptainer works
[2025-06-05 09:30:35] Set ATHENA_PROC_NUMBER=8
[2025-06-05 09:30:35] Set ATHENA_CORE_NUMBER=8
[2025-06-05 09:30:36] Starting ATLAS job with PandaID=6680353988
[2025-06-05 09:30:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:56:44]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:56:44] 2025-06-05 12:56:18,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:56:44] 2025-06-05 12:56:18,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:56:44] 2025-06-05 12:56:18,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:56:44] 2025-06-05 12:56:18,049 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:56:44] 2025-06-05 12:56:18,049 | INFO     | sum of square deviations: 9059954057.0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,053 | INFO     | sum of deviations: 87931437536.0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,053 | INFO     | mean x: 1749118688.5
[2025-06-05 14:56:44] 2025-06-05 12:56:18,053 | INFO     | mean y: 2465037.662337662
[2025-06-05 14:56:44] 2025-06-05 12:56:18,053 | INFO     | -- intersect: -16973616709.910698
[2025-06-05 14:56:44] 2025-06-05 12:56:18,053 | INFO     | intersect: -16973616709.910698
[2025-06-05 14:56:44] 2025-06-05 12:56:18,054 | INFO     | chi2: 6.299335367955767
[2025-06-05 14:56:44] 2025-06-05 12:56:18,054 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,057 | INFO     | sum of deviations: 106576131821.99998
[2025-06-05 14:56:44] 2025-06-05 12:56:18,057 | INFO     | mean x: 1749118536.0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,057 | INFO     | mean y: 2471492.597359736
[2025-06-05 14:56:44] 2025-06-05 12:56:18,057 | INFO     | -- intersect: -21608665514.098278
[2025-06-05 14:56:44] 2025-06-05 12:56:18,058 | INFO     | intersect: -21608665514.098278
[2025-06-05 14:56:44] 2025-06-05 12:56:18,058 | INFO     | chi2: 5.56920226249326
[2025-06-05 14:56:44] 2025-06-05 12:56:18,058 | INFO     | current chi2=5.56920226249326 (change=11.59063715160552 %)
[2025-06-05 14:56:44] 2025-06-05 12:56:18,058 | INFO     | right removable region: 302
[2025-06-05 14:56:44] 2025-06-05 12:56:18,059 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,062 | INFO     | sum of deviations: -17618332503.0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,062 | INFO     | mean x: 1749118841.0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,062 | INFO     | mean y: 2502084.3564356435
[2025-06-05 14:56:44] 2025-06-05 12:56:18,062 | INFO     | -- intersect: 3575086840.771526
[2025-06-05 14:56:44] 2025-06-05 12:56:18,062 | INFO     | intersect: 3575086840.771526
[2025-06-05 14:56:44] 2025-06-05 12:56:18,063 | INFO     | chi2: 1.7817565630317622
[2025-06-05 14:56:44] 2025-06-05 12:56:18,063 | INFO     | current chi2=1.7817565630317622 (change=71.71516582375625 %)
[2025-06-05 14:56:44] 2025-06-05 12:56:18,063 | INFO     | sum of square deviations: 8205826414.5
[2025-06-05 14:56:44] 2025-06-05 12:56:18,066 | INFO     | sum of deviations: -55823159847.99997
[2025-06-05 14:56:44] 2025-06-05 12:56:18,066 | INFO     | mean x: 1749118993.5
[2025-06-05 14:56:44] 2025-06-05 12:56:18,066 | INFO     | mean y: 2515875.134228188
[2025-06-05 14:56:44] 2025-06-05 12:56:18,067 | INFO     | -- intersect: 11901542765.928242
[2025-06-05 14:56:44] 2025-06-05 12:56:18,067 | INFO     | intersect: 11901542765.928242
[2025-06-05 14:56:44] 2025-06-05 12:56:18,067 | INFO     | chi2: 0.9592015098776229
[2025-06-05 14:56:44] 2025-06-05 12:56:18,067 | INFO     | current chi2=0.9592015098776229 (change=46.165400494134516 %)
[2025-06-05 14:56:44] 2025-06-05 12:56:18,068 | INFO     | sum of square deviations: 7799669962.0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,070 | INFO     | sum of deviations: -52717744641.99999
[2025-06-05 14:56:44] 2025-06-05 12:56:18,071 | INFO     | mean x: 1749119146.0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,071 | INFO     | mean y: 2514689.0546075087
[2025-06-05 14:56:44] 2025-06-05 12:56:18,071 | INFO     | -- intersect: 11824760622.088497
[2025-06-05 14:56:44] 2025-06-05 12:56:18,071 | INFO     | intersect: 11824760622.088497
[2025-06-05 14:56:44] 2025-06-05 12:56:18,071 | INFO     | chi2: 0.9443991836085248
[2025-06-05 14:56:44] 2025-06-05 12:56:18,072 | INFO     | current chi2=0.9443991836085248 (change=1.543192553042016 %)
[2025-06-05 14:56:44] 2025-06-05 12:56:18,072 | INFO     | left removable region: 30
[2025-06-05 14:56:44] 2025-06-05 12:56:18,072 | INFO     | sum of square deviations: 6239923508.0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,074 | INFO     | sum of deviations: -3175979914.5
[2025-06-05 14:56:44] 2025-06-05 12:56:18,075 | INFO     | mean x: 1749119420.5
[2025-06-05 14:56:44] 2025-06-05 12:56:18,075 | INFO     | mean y: 2509922.6727941176
[2025-06-05 14:56:44] 2025-06-05 12:56:18,075 | INFO     | -- intersect: 892772141.5041279
[2025-06-05 14:56:44] 2025-06-05 12:56:18,075 | INFO     | intersect: 892772141.5041279
[2025-06-05 14:56:44] 2025-06-05 12:56:18,075 | INFO     | chi2: 0.05826624389808769
[2025-06-05 14:56:44] 2025-06-05 12:56:18,075 | INFO     | -- intersect: 892772141.5041279
[2025-06-05 14:56:44] 2025-06-05 12:56:18,076 | INFO     | current memory leak: -0.51 B/s (using 272 data points, chi2=0.06)
[2025-06-05 14:56:44] 2025-06-05 12:56:18,077 | INFO     | ..............................
[2025-06-05 14:56:44] 2025-06-05 12:56:18,077 | INFO     | . Timing measurements:
[2025-06-05 14:56:44] 2025-06-05 12:56:18,077 | INFO     | . get job = 0 s
[2025-06-05 14:56:44] 2025-06-05 12:56:18,077 | INFO     | . initial setup = 5 s
[2025-06-05 14:56:44] 2025-06-05 12:56:18,077 | INFO     | . payload setup = 166 s
[2025-06-05 14:56:44] 2025-06-05 12:56:18,077 | INFO     | . stage-in = 0 s
[2025-06-05 14:56:44] 2025-06-05 12:56:18,077 | INFO     | . payload execution = 18903 s
[2025-06-05 14:56:44] 2025-06-05 12:56:18,077 | INFO     | . stage-out = 4 s
[2025-06-05 14:56:44] 2025-06-05 12:56:18,077 | INFO     | . log creation = 1 s
[2025-06-05 14:56:44] 2025-06-05 12:56:18,077 | INFO     | ..............................
[2025-06-05 14:56:44] 2025-06-05 12:56:18,200 | INFO     | 
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | job summary report
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | --------------------------------------------------
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | PanDA job id: 6680353988
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | task id: 44871837
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | errors: (none)
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | pilot state: finished 
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | transexitcode: 0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | exeerrorcode: 0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | exeerrordiag: 
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | exitcode: 0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,201 | INFO     | exitmsg: OK
[2025-06-05 14:56:44] 2025-06-05 12:56:18,202 | INFO     | cpuconsumptiontime: 71920 s
[2025-06-05 14:56:44] 2025-06-05 12:56:18,202 | INFO     | nevents: 400
[2025-06-05 14:56:44] 2025-06-05 12:56:18,202 | INFO     | neventsw: 0
[2025-06-05 14:56:44] 2025-06-05 12:56:18,202 | INFO     | pid: 6253
[2025-06-05 14:56:44] 2025-06-05 12:56:18,202 | INFO     | pgrp: 6253
[2025-06-05 14:56:44] 2025-06-05 12:56:18,202 | INFO     | corecount: 8
[2025-06-05 14:56:44] 2025-06-05 12:56:18,202 | INFO     | event service: False
[2025-06-05 14:56:44] 2025-06-05 12:56:18,202 | INFO     | sizes: {0: 2397114, 1: 2397369, 12: 2397369, 23: 2397397, 34: 2397425, 44: 2397453, 55: 2397609, 66: 2397637, 76: 2397665, 87: 2397721, 92: 2397955, 98: 2398263, 1
[2025-06-05 14:56:44] 2025-06-05 12:56:18,202 | INFO     | --------------------------------------------------
[2025-06-05 14:56:44] 2025-06-05 12:56:18,202 | INFO     | 
[2025-06-05 14:56:44] 2025-06-05 12:56:18,203 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-05 14:56:44] 2025-06-05 12:56:18,459 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,459 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,459 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,459 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,459 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:56:44] 2025-06-05 12:56:18,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,461 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:56:44] 2025-06-05 12:56:18,461 | INFO     | job 6680353988 has completed (purged errors)
[2025-06-05 14:56:44] 2025-06-05 12:56:18,461 | INFO     | overall cleanup function is called
[2025-06-05 14:56:44] 2025-06-05 12:56:19,470 | INFO     | --- collectZombieJob: --- 10, [6253]
[2025-06-05 14:56:44] 2025-06-05 12:56:19,471 | INFO     | zombie collector waiting for pid 6253
[2025-06-05 14:56:44] 2025-06-05 12:56:19,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:56:44] 2025-06-05 12:56:19,471 | INFO     | collected zombie processes
[2025-06-05 14:56:44] 2025-06-05 12:56:19,471 | INFO     | will attempt to kill all subprocesses of pid=6253
[2025-06-05 14:56:44] 2025-06-05 12:56:19,580 | INFO     | process IDs to be killed: [6253] (in reverse order)
[2025-06-05 14:56:44] 2025-06-05 12:56:19,747 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:56:44] 2025-06-05 12:56:19,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:56:44] 2025-06-05 12:56:19,753 | INFO     | did not find any defunct processes belonging to 6253
[2025-06-05 14:56:44] 2025-06-05 12:56:19,757 | INFO     | did not find any defunct processes belonging to 6253
[2025-06-05 14:56:44] 2025-06-05 12:56:19,758 | INFO     | ready for new job
[2025-06-05 14:56:44] 2025-06-05 12:56:19,758 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:56:44] 2025-06-05 12:56:19,760 | INFO     | **************************************
[2025-06-05 14:56:44] 2025-06-05 12:56:19,761 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:56:44] 2025-06-05 12:56:19,761 | INFO     | **************************************
[2025-06-05 14:56:44] 2025-06-05 12:56:19,761 | INFO     | 
[2025-06-05 14:56:44] 2025-06-05 12:56:19,761 | INFO     | pilot is running in a VM
[2025-06-05 14:56:44] 2025-06-05 12:56:19,762 | INFO     | architecture information:
[2025-06-05 14:56:44] 2025-06-05 12:56:19,763 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:56:44] 2025-06-05 12:56:19,834 | INFO     | cat /etc/os-release:
[2025-06-05 14:56:44] NAME="CentOS Linux"
[2025-06-05 14:56:44] VERSION="7 (Core)"
[2025-06-05 14:56:44] ID="centos"
[2025-06-05 14:56:44] ID_LIKE="rhel fedora"
[2025-06-05 14:56:44] VERSION_ID="7"
[2025-06-05 14:56:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:56:44] ANSI_COLOR="0;31"
[2025-06-05 14:56:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:56:44] HOME_URL="https://www.centos.org/"
[2025-06-05 14:56:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:56:44] 
[2025-06-05 14:56:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:56:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:56:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:56:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:56:44] 
[2025-06-05 14:56:44] 2025-06-05 12:56:19,835 | INFO     | **************************************
[2025-06-05 14:56:44] 2025-06-05 12:56:20,338 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-05 14:56:44] 2025-06-05 12:56:20,405 | INFO     | sufficient remaining disk space (496992518144 B)
[2025-06-05 14:56:44] 2025-06-05 12:56:20,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:56:44] 2025-06-05 12:56:20,409 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:56:44] 2025-06-05 12:56:20,409 | INFO     | update_server=False
[2025-06-05 14:56:44] 2025-06-05 12:56:20,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:56:44] 2025-06-05 12:56:20,410 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 14:56:44] 2025-06-05 12:56:20,411 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:56:44] 2025-06-05 12:56:20,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:56:44] 2025-06-05 12:56:20,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:56:44] 2025-06-05 12:56:20,474 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 14:56:44] 2025-06-05 12:56:20,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 14:56:44] 2025-06-05 12:56:20,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:56:44] 2025-06-05 12:56:20,475 | INFO     | will abort loop
[2025-06-05 14:56:44] 2025-06-05 12:56:20,623 | INFO     | all data control threads have been joined
[2025-06-05 14:56:44] 2025-06-05 12:56:20,759 | INFO     | all payload control threads have been joined
[2025-06-05 14:56:44] 2025-06-05 12:56:20,970 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:56:44] 2025-06-05 12:56:21,256 | INFO     | all job control threads have been joined
[2025-06-05 14:56:44] 2025-06-05 12:56:21,415 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:21,481 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:21,629 | INFO     | [data] control thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:21,631 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:21,718 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:21,765 | INFO     | [payload] control thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:21,927 | INFO     | [job] validate thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:21,948 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:22,262 | INFO     | [job] control thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:22,632 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:22,756 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:22,905 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:22,948 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:22,978 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:23,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:56:44] 2025-06-05 12:56:23,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:56:44] 2025-06-05 12:56:24,218 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:27,531 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:56:44] 2025-06-05 12:56:28,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694196488000)>', '<ExcThread(monitor, started 139693509293824)>']
[2025-06-05 14:56:44] 2025-06-05 12:56:29,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:56:44] 2025-06-05 12:56:29,463 | INFO     | [monitor] control thread has ended
[2025-06-05 14:56:44] 2025-06-05 12:56:33,507 | INFO     | all workflow threads have been joined
[2025-06-05 14:56:44] 2025-06-05 12:56:33,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:56:44] 2025-06-05 12:56:33,508 | INFO     | traces error code: 0
[2025-06-05 14:56:44] 2025-06-05 12:56:33,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:56:44] 2025-06-05 12:56:33,823 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:56:44] 2025-06-05 12:56:33,826 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:56:44] 2025-06-05 12:56:33,849 [wrapper] pilotpid: 31966
[2025-06-05 14:56:44] 2025-06-05 12:56:33,859 [wrapper] Pilot exit status: 0
[2025-06-05 14:56:44] 2025-06-05 12:56:34,056 [wrapper] pandaids: 6680353988
[2025-06-05 14:56:44] 2025-06-05 12:56:34,147 [wrapper] cleanup supervisor_pilot 21946 31967
[2025-06-05 14:56:44] 2025-06-05 12:56:34,162 [wrapper] Test setup, not cleaning
[2025-06-05 14:56:44] 2025-06-05 12:56:34,214 [wrapper] apfmon messages muted
[2025-06-05 14:56:44] 2025-06-05 12:56:34,279 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:56:44] 2025-06-05 12:56:34,356 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:56:44]  *** Error codes and diagnostics ***
[2025-06-05 14:56:44]     "exeErrorCode": 0,
[2025-06-05 14:56:44]     "exeErrorDiag": "",
[2025-06-05 14:56:44]     "pilotErrorCode": 0,
[2025-06-05 14:56:44]     "pilotErrorDiag": "",
[2025-06-05 14:56:44]  *** Listing of results directory ***
[2025-06-05 14:56:44] total 422428
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc    495897 Jun  5 05:16 pilot3.tar.gz
[2025-06-05 14:56:44] -rwx------. 1 boinc boinc     37140 Jun  5 05:41 runpilot2-wrapper.sh
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc      5111 Jun  5 05:41 queuedata.json
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc       100 Jun  5 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:56:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 09:30 run_atlas
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc       105 Jun  5 09:30 job.xml
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc      6391 Jun  5 09:30 init_data.xml
[2025-06-05 14:56:44] -rw-r--r--. 2 boinc boinc 226532501 Jun  5 09:30 EVNT.44871834._003069.pool.root.1
[2025-06-05 14:56:44] -rw-r--r--. 2 boinc boinc     15093 Jun  5 09:30 start_atlas.sh
[2025-06-05 14:56:44] drwxrwx--x. 2 boinc boinc        68 Jun  5 09:30 shared
[2025-06-05 14:56:44] -rw-r--r--. 2 boinc boinc    508880 Jun  5 09:30 input.tar.gz
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc         0 Jun  5 09:30 boinc_lockfile
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc      2558 Jun  5 09:30 pandaJob.out
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc    983087 Jun  5 09:33 agis_schedconf.cvmfs.json
[2025-06-05 14:56:44] drwx------. 4 boinc boinc      4096 Jun  5 09:33 pilot3
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc 198072543 Jun  5 14:53 HITS.44871837._102276.pool.root.1
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc       531 Jun  5 14:53 boinc_task_state.xml
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc      1013 Jun  5 14:54 memory_monitor_summary.json
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc   1598969 Jun  5 14:54 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc    438365 Jun  5 14:54 log.44871837._102276.job.log.tgz.1
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc        95 Jun  5 14:56 pilot_heartbeat.json
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc      7686 Jun  5 14:56 heartbeat.json
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc      4725 Jun  5 14:56 pilotlog.txt
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc   1632050 Jun  5 14:56 log.44871837._102276.job.log.1
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc      8192 Jun  5 14:56 boinc_mmap_file
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc        28 Jun  5 14:56 wrapper_checkpoint.txt
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc       357 Jun  5 14:56 output.list
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc       620 Jun  5 14:56 runtime_log
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc   2088960 Jun  5 14:56 result.tar.gz
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc      8659 Jun  5 14:56 runtime_log.err
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc       657 Jun  5 14:56 0UALDmMfGh7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmf4nKDmgfFmdm.diag
[2025-06-05 14:56:44] -rw-r--r--. 1 boinc boinc     20521 Jun  5 14:56 stderr.txt
[2025-06-05 14:56:44] HITS file was successfully produced:
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc 198072543 Jun  5 14:53 shared/HITS.pool.root.1
[2025-06-05 14:56:44]  *** Contents of shared directory: ***
[2025-06-05 14:56:44] total 417212
[2025-06-05 14:56:44] -rw-r--r--. 2 boinc boinc 226532501 Jun  5 09:30 ATLAS.root_0
[2025-06-05 14:56:44] -rw-r--r--. 2 boinc boinc     15093 Jun  5 09:30 start_atlas.sh
[2025-06-05 14:56:44] -rw-r--r--. 2 boinc boinc    508880 Jun  5 09:30 input.tar.gz
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc 198072543 Jun  5 14:53 HITS.pool.root.1
[2025-06-05 14:56:44] -rw-------. 1 boinc boinc   2088960 Jun  5 14:56 result.tar.gz
14:56:46 (26276): run_atlas exited; CPU time 72178.996869
14:56:46 (26276): called boinc_finish(0)

</stderr_txt>
]]>

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